Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Zein-binding | PF04576 | 343 - 433 | 1.6e-31 | Zein-binding |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 249 |
| AatII | GACGTC | 1 cut(s) | 2486 |
| AccB1I | GGYRCC | 2 cut(s) | 1767, 1900 |
| AccI | GTMKAC | 1 cut(s) | 1341 |
| AccII | CGCG | 1 cut(s) | 1047 |
| AccIII | TCCGGA | 5 cut(s) | 1846, 1870, 2038, 2095, 2464 |
| AciI | CCGC | 8 cut(s) | 552, 609, 1004, 1045, 1214, 1510, 1814, 2063 |
| AclWI | GGATC | 5 cut(s) | 215, 419, 432, 776, 2359 |
| AcsI | RAATTY | 4 cut(s) | 158, 459, 1334, 1750 |
| AcuI | CTGAAG | 3 cut(s) | 1052, 1089, 1809 |
| AcyI | GRCGYC | 9 cut(s) | 1805, 1901, 1937, 1973, 2057, 2174, 2210, 2294, 2483 |
| AdeI | CACNNNGTG | 1 cut(s) | 1774 |
| AfaI | GTAC | 2 cut(s) | 1076, 1375 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 49, 408, 857, 1357, 1484, 1614, 2374 |
| AgsI | TTSAA | 9 cut(s) | 9, 101, 565, 936, 1017, 1330, 1474, 1516, 1664 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1057 |
| AjnI | CCWGG | 4 cut(s) | 203, 649, 670, 1233 |
| Alw21I | GWGCWC | 4 cut(s) | 72, 180, 646, 2001 |
| Alw26I | GTCTC | 5 cut(s) | 289, 1030, 1260, 1638, 2490 |
| AlwI | GGATC | 5 cut(s) | 215, 419, 432, 776, 2359 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1454 |
| Ama87I | CYCGRG | 1 cut(s) | 428 |
| Aor13HI | TCCGGA | 5 cut(s) | 1846, 1870, 2038, 2095, 2464 |
| ApeKI | GCWGC | 7 cut(s) | 479, 791, 1115, 1163, 1454, 1604, 1691 |
| ApoI | RAATTY | 4 cut(s) | 158, 459, 1334, 1750 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1102 |
| AspA2I | CCTAGG | 1 cut(s) | 914 |
| AspLEI | GCGC | 4 cut(s) | 559, 619, 1400, 1903 |
| AspS9I | GGNCC | 2 cut(s) | 1042, 1348 |
| AsuC2I | CCSGG | 1 cut(s) | 1426 |
| AsuHPI | GGTGA | 5 cut(s) | 31, 830, 936, 1376, 1475 |
| AsuNHI | GCTAGC | 1 cut(s) | 613 |
| AvaI | CYCGRG | 1 cut(s) | 428 |
| AvaII | GGWCC | 2 cut(s) | 1042, 1348 |
| AvrII | CCTAGG | 1 cut(s) | 914 |
| BanI | GGYRCC | 2 cut(s) | 1767, 1900 |
| BanII | GRGCYC | 2 cut(s) | 72, 180 |
| BauI | CACGAG | 1 cut(s) | 639 |
| BbsI | GAAGAC | 4 cut(s) | 344, 1499, 1868, 2060 |
| Bbv12I | GWGCWC | 4 cut(s) | 72, 180, 646, 2001 |
| BbvI | GCAGC | 7 cut(s) | 491, 778, 1127, 1150, 1441, 1591, 1678 |
| BccI | CCATC | 6 cut(s) | 125, 977, 1060, 1168, 1195, 1559 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 190, 224 |
| BciT130I | CCWGG | 4 cut(s) | 205, 651, 672, 1235 |
| BclI | TGATCA | 3 cut(s) | 111, 1137, 1417 |
| BcnI | CCSGG | 1 cut(s) | 1426 |
| BcoDI | GTCTC | 5 cut(s) | 289, 1030, 1260, 1638, 2490 |
| BfaI | CTAG | 6 cut(s) | 404, 614, 915, 1523, 1943, 2015 |
| BfmI | CTRYAG | 3 cut(s) | 477, 1110, 1905 |
| BfoI | RGCGCY | 1 cut(s) | 1904 |
| BisI | GCNGC | 7 cut(s) | 480, 792, 1116, 1164, 1455, 1605, 1692 |
| BlnI | CCTAGG | 1 cut(s) | 914 |
| BlsI | GCNGC | 7 cut(s) | 481, 793, 1117, 1165, 1456, 1606, 1693 |
| Bme1390I | CCNGG | 5 cut(s) | 205, 651, 672, 1235, 1426 |
| Bme18I | GGWCC | 2 cut(s) | 1042, 1348 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1057 |
| BmeT110I | CYCGRG | 1 cut(s) | 428 |
| BmgT120I | GGNCC | 2 cut(s) | 1042, 1348 |
| BmiI | GGNNCC | 2 cut(s) | 1769, 1902 |
| BmrFI | CCNGG | 5 cut(s) | 205, 651, 672, 1235, 1426 |
| BmsI | GCATC | 8 cut(s) | 487, 826, 991, 1852, 1876, 1998, 2044, 2103 |
| BmtI | GCTAGC | 1 cut(s) | 617 |
| BpiI | GAAGAC | 4 cut(s) | 344, 1499, 1868, 2060 |
| BpmI | CTGGAG | 3 cut(s) | 1962, 2321, 2472 |
| BpuEI | CTTGAG | 2 cut(s) | 692, 1724 |
| BpuMI | CCSGG | 1 cut(s) | 1426 |
| Bsa29I | ATCGAT | 1 cut(s) | 210 |
| BsaBI | GATNNNNATC | 3 cut(s) | 453, 666, 987 |
| BsaHI | GRCGYC | 9 cut(s) | 1805, 1901, 1937, 1973, 2057, 2174, 2210, 2294, 2483 |
| BsaJI | CCNNGG | 5 cut(s) | 649, 650, 914, 1233, 1459 |
| BsaWI | WCCGGW | 5 cut(s) | 1846, 1870, 2038, 2095, 2464 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 619, 649, 1746, 1776 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 49, 408, 857, 1357, 1484, 1614, 2374 |
| Bse1I | ACTGG | 1 cut(s) | 1678 |
| Bse3DI | GCAATG | 3 cut(s) | 797, 1134, 1181 |
| Bse8I | GATNNNNATC | 3 cut(s) | 453, 666, 987 |
| BseAI | TCCGGA | 5 cut(s) | 1846, 1870, 2038, 2095, 2464 |
| BseBI | CCWGG | 4 cut(s) | 205, 651, 672, 1235 |
| BseCI | ATCGAT | 1 cut(s) | 210 |
| BseDI | CCNNGG | 5 cut(s) | 649, 650, 914, 1233, 1459 |
| BseGI | GGATG | 9 cut(s) | 451, 502, 751, 1585, 1843, 1867, 2035, 2188, 2449 |
| BseJI | GATNNNNATC | 3 cut(s) | 453, 666, 987 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 49, 408, 857, 1357, 1484, 1614, 2374 |
| BseMI | GCAATG | 3 cut(s) | 797, 1134, 1181 |
| BseMII | CTCAG | 4 cut(s) | 193, 458, 723, 1291 |
| BseNI | ACTGG | 1 cut(s) | 1678 |
| BseRI | GAGGAG | 2 cut(s) | 1220, 1368 |
| BseXI | GCAGC | 7 cut(s) | 491, 778, 1127, 1150, 1441, 1591, 1678 |
| Bsh1236I | CGCG | 1 cut(s) | 1047 |
| BshNI | GGYRCC | 2 cut(s) | 1767, 1900 |
| BshVI | ATCGAT | 1 cut(s) | 210 |
| BsiHKAI | GWGCWC | 4 cut(s) | 72, 180, 646, 2001 |
| BsiHKCI | CYCGRG | 1 cut(s) | 428 |
| BsiSI | CCGG | 8 cut(s) | 1425, 1765, 1811, 1847, 1871, 2039, 2096, 2465 |
| BslFI | GGGAC | 2 cut(s) | 45, 385 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 49, 408, 857, 1357, 1484, 1614, 2374 |
| BsmAI | GTCTC | 5 cut(s) | 289, 1030, 1260, 1638, 2490 |
| BsmBI | CGTCTC | 2 cut(s) | 1260, 2490 |
| BsmFI | GGGAC | 2 cut(s) | 45, 385 |
| BsoBI | CYCGRG | 1 cut(s) | 428 |
| Bsp1286I | GDGCHC | 4 cut(s) | 72, 180, 646, 2001 |
| Bsp13I | TCCGGA | 5 cut(s) | 1846, 1870, 2038, 2095, 2464 |
| Bsp1407I | TGTACA | 1 cut(s) | 1074 |
| BspACI | CCGC | 8 cut(s) | 552, 609, 1004, 1045, 1214, 1510, 1814, 2063 |
| BspCNI | CTCAG | 4 cut(s) | 192, 459, 724, 1290 |
| BspDI | ATCGAT | 1 cut(s) | 210 |
| BspEI | TCCGGA | 5 cut(s) | 1846, 1870, 2038, 2095, 2464 |
| BspFNI | CGCG | 1 cut(s) | 1047 |
| BspLI | GGNNCC | 2 cut(s) | 1769, 1902 |
| BspMAI | CTGCAG | 1 cut(s) | 481 |
| BspOI | GCTAGC | 1 cut(s) | 617 |
| BspPI | GGATC | 5 cut(s) | 215, 419, 432, 776, 2359 |
| BspQI | GCTCTTC | 1 cut(s) | 128 |
| BspT107I | GGYRCC | 2 cut(s) | 1767, 1900 |
| BsrDI | GCAATG | 3 cut(s) | 797, 1134, 1181 |
| BsrGI | TGTACA | 1 cut(s) | 1074 |
| BsrI | ACTGG | 1 cut(s) | 1678 |
| BssECI | CCNNGG | 5 cut(s) | 649, 650, 914, 1233, 1459 |
| BssNI | GRCGYC | 9 cut(s) | 1805, 1901, 1937, 1973, 2057, 2174, 2210, 2294, 2483 |
| BssSI | CACGAG | 1 cut(s) | 639 |
| BssT1I | CCWWGG | 1 cut(s) | 914 |
| Bst2BI | CACGAG | 1 cut(s) | 639 |
| Bst2UI | CCWGG | 4 cut(s) | 205, 651, 672, 1235 |
| Bst4CI | ACNGT | 2 cut(s) | 1028, 2003 |
| Bst6I | CTCTTC | 3 cut(s) | 128, 509, 1028 |
| BstACI | GRCGYC | 9 cut(s) | 1805, 1901, 1937, 1973, 2057, 2174, 2210, 2294, 2483 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1454 |
| BstAUI | TGTACA | 1 cut(s) | 1074 |
| BstC8I | GCNNGC | 8 cut(s) | 194, 477, 611, 615, 621, 1212, 1257, 2061 |
| BstDEI | CTNAG | 8 cut(s) | 179, 467, 732, 1277, 1382, 1640, 1681, 1695 |
| BstF5I | GGATG | 9 cut(s) | 451, 502, 751, 1585, 1843, 1867, 2035, 2188, 2449 |
| BstFNI | CGCG | 1 cut(s) | 1047 |
| BstH2I | RGCGCY | 1 cut(s) | 1904 |
| BstHHI | GCGC | 4 cut(s) | 559, 619, 1400, 1903 |
| BstMAI | GTCTC | 5 cut(s) | 289, 1030, 1260, 1638, 2490 |
| BstNI | CCWGG | 4 cut(s) | 205, 651, 672, 1235 |
| BstNSI | RCATGY | 2 cut(s) | 351, 1411 |
| BstSCI | CCNGG | 5 cut(s) | 203, 649, 670, 1233, 1424 |
| BstSFI | CTRYAG | 3 cut(s) | 477, 1110, 1905 |
| BstUI | CGCG | 1 cut(s) | 1047 |
| BstV1I | GCAGC | 7 cut(s) | 491, 778, 1127, 1150, 1441, 1591, 1678 |
| BstV2I | GAAGAC | 4 cut(s) | 344, 1499, 1868, 2060 |
| BstX2I | RGATCY | 4 cut(s) | 411, 424, 781, 2364 |
| BstYI | RGATCY | 4 cut(s) | 411, 424, 781, 2364 |
| Bsu15I | ATCGAT | 1 cut(s) | 210 |
| BsuTUI | ATCGAT | 1 cut(s) | 210 |
| BtsCI | GGATG | 9 cut(s) | 451, 502, 751, 1585, 1843, 1867, 2035, 2188, 2449 |
| BtsIMutI | CAGTG | 2 cut(s) | 1061, 1671 |
| Cac8I | GCNNGC | 8 cut(s) | 194, 477, 611, 615, 621, 1212, 1257, 2061 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1454 |
| CfoI | GCGC | 4 cut(s) | 559, 619, 1400, 1903 |
| Cfr13I | GGNCC | 2 cut(s) | 1042, 1348 |
| ClaI | ATCGAT | 1 cut(s) | 210 |
| Csp6I | GTAC | 2 cut(s) | 1075, 1374 |
| CviAII | CATG | 7 cut(s) | 61, 82, 348, 489, 529, 1078, 1408 |
| CviQI | GTAC | 2 cut(s) | 1075, 1374 |
| DdeI | CTNAG | 8 cut(s) | 179, 467, 732, 1277, 1382, 1640, 1681, 1695 |
| DinI | GGCGCC | 1 cut(s) | 1902 |
| DraIII | CACNNNGTG | 1 cut(s) | 1774 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1057 |
| Eam1104I | CTCTTC | 3 cut(s) | 128, 509, 1028 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1057 |
| EarI | CTCTTC | 3 cut(s) | 128, 509, 1028 |
| EciI | GGCGGA | 2 cut(s) | 1229, 1829 |
| Ecl136II | GAGCTC | 2 cut(s) | 70, 178 |
| Eco130I | CCWWGG | 1 cut(s) | 914 |
| Eco24I | GRGCYC | 2 cut(s) | 72, 180 |
| Eco47I | GGWCC | 2 cut(s) | 1042, 1348 |
| Eco53kI | GAGCTC | 2 cut(s) | 70, 178 |
| Eco57I | CTGAAG | 3 cut(s) | 1052, 1089, 1809 |
| Eco88I | CYCGRG | 1 cut(s) | 428 |
| EcoICRI | GAGCTC | 2 cut(s) | 70, 178 |
| EcoRI | GAATTC | 1 cut(s) | 158 |
| EcoRII | CCWGG | 4 cut(s) | 203, 649, 670, 1233 |
| EcoT14I | CCWWGG | 1 cut(s) | 914 |
| EcoT38I | GRGCYC | 2 cut(s) | 72, 180 |
| EgeI | GGCGCC | 1 cut(s) | 1902 |
| EheI | GGCGCC | 1 cut(s) | 1902 |
| ErhI | CCWWGG | 1 cut(s) | 914 |
| Esp3I | CGTCTC | 2 cut(s) | 1260, 2490 |
| FaeI | CATG | 7 cut(s) | 64, 85, 351, 492, 532, 1081, 1411 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 20, 52, 1087, 1119 |
| FaqI | GGGAC | 2 cut(s) | 45, 385 |
| FatI | CATG | 7 cut(s) | 60, 81, 347, 488, 528, 1077, 1407 |
| FauI | CCCGC | 1 cut(s) | 602 |
| FauNDI | CATATG | 2 cut(s) | 260, 1246 |
| FbaI | TGATCA | 3 cut(s) | 111, 1137, 1417 |
| FblI | GTMKAC | 1 cut(s) | 1341 |
| Fnu4HI | GCNGC | 7 cut(s) | 480, 792, 1116, 1164, 1455, 1605, 1692 |
| FokI | GGATG | 9 cut(s) | 458, 509, 758, 1592, 1830, 1854, 2022, 2195, 2456 |
| FriOI | GRGCYC | 2 cut(s) | 72, 180 |
| Fsp4HI | GCNGC | 7 cut(s) | 480, 792, 1116, 1164, 1455, 1605, 1692 |
| FspBI | CTAG | 6 cut(s) | 404, 614, 915, 1523, 1943, 2015 |
| GlaI | GCGC | 4 cut(s) | 558, 618, 1399, 1902 |
| GluI | GCNGC | 7 cut(s) | 480, 792, 1116, 1164, 1455, 1605, 1692 |
| GsuI | CTGGAG | 3 cut(s) | 1962, 2321, 2472 |
| HaeII | RGCGCY | 1 cut(s) | 1904 |
| HapII | CCGG | 8 cut(s) | 1425, 1765, 1811, 1847, 1871, 2039, 2096, 2465 |
| HhaI | GCGC | 4 cut(s) | 559, 619, 1400, 1903 |
| Hin1I | GRCGYC | 9 cut(s) | 1805, 1901, 1937, 1973, 2057, 2174, 2210, 2294, 2483 |
| Hin1II | CATG | 7 cut(s) | 64, 85, 351, 492, 532, 1081, 1411 |
| Hin6I | GCGC | 4 cut(s) | 557, 617, 1398, 1901 |
| HinP1I | GCGC | 4 cut(s) | 557, 617, 1398, 1901 |
| HincII | GTYRAC | 2 cut(s) | 226, 828 |
| HindII | GTYRAC | 2 cut(s) | 226, 828 |
| HpaI | GTTAAC | 2 cut(s) | 226, 828 |
| HpaII | CCGG | 8 cut(s) | 1425, 1765, 1811, 1847, 1871, 2039, 2096, 2465 |
| HphI | GGTGA | 5 cut(s) | 31, 830, 936, 1376, 1475 |
| Hpy166II | GTNNAC | 4 cut(s) | 226, 828, 1051, 1342 |
| Hpy8I | GTNNAC | 4 cut(s) | 226, 828, 1051, 1342 |
| HpyCH4III | ACNGT | 2 cut(s) | 1028, 2003 |
| HpyCH4IV | ACGT | 1 cut(s) | 2483 |
| HpyCH4V | TGCA | 9 cut(s) | 201, 365, 479, 500, 1024, 1127, 1186, 1411, 1448 |
| HpyF3I | CTNAG | 8 cut(s) | 179, 467, 732, 1277, 1382, 1640, 1681, 1695 |
| HpySE526I | ACGT | 1 cut(s) | 2483 |
| Hsp92I | GRCGYC | 9 cut(s) | 1805, 1901, 1937, 1973, 2057, 2174, 2210, 2294, 2483 |
| Hsp92II | CATG | 7 cut(s) | 64, 85, 351, 492, 532, 1081, 1411 |
| HspAI | GCGC | 4 cut(s) | 557, 617, 1398, 1901 |
| KasI | GGCGCC | 1 cut(s) | 1900 |
| Kpn2I | TCCGGA | 5 cut(s) | 1846, 1870, 2038, 2095, 2464 |
| Ksp22I | TGATCA | 3 cut(s) | 111, 1137, 1417 |
| KspAI | GTTAAC | 2 cut(s) | 226, 828 |
| LguI | GCTCTTC | 1 cut(s) | 128 |
| Lsp1109I | GCAGC | 7 cut(s) | 491, 778, 1127, 1150, 1441, 1591, 1678 |
| LweI | GCATC | 8 cut(s) | 487, 826, 991, 1852, 1876, 1998, 2044, 2103 |
| MaeI | CTAG | 6 cut(s) | 404, 614, 915, 1523, 1943, 2015 |
| MaeII | ACGT | 1 cut(s) | 2483 |
| MaeIII | GTNAC | 1 cut(s) | 1059 |
| MfeI | CAATTG | 1 cut(s) | 1619 |
| MflI | RGATCY | 4 cut(s) | 411, 424, 781, 2364 |
| MhlI | GDGCHC | 4 cut(s) | 72, 180, 646, 2001 |
| MluCI | AATT | 6 cut(s) | 158, 459, 1017, 1334, 1619, 1750 |
| Mly113I | GGCGCC | 1 cut(s) | 1901 |
| MlyI | GAGTC | 3 cut(s) | 386, 737, 841 |
| MmeI | TCCRAC | 1 cut(s) | 348 |
| MroI | TCCGGA | 5 cut(s) | 1846, 1870, 2038, 2095, 2464 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1102 |
| MseI | TTAA | 2 cut(s) | 225, 827 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1641 |
| MspA1I | CMGCKG | 2 cut(s) | 466, 1109 |
| MspI | CCGG | 8 cut(s) | 1425, 1765, 1811, 1847, 1871, 2039, 2096, 2465 |
| MspR9I | CCNGG | 5 cut(s) | 205, 651, 672, 1235, 1426 |
| MunI | CAATTG | 1 cut(s) | 1619 |
| MvaI | CCWGG | 4 cut(s) | 205, 651, 672, 1235 |
| MvnI | CGCG | 1 cut(s) | 1047 |
| NarI | GGCGCC | 1 cut(s) | 1901 |
| NciI | CCSGG | 1 cut(s) | 1426 |
| NdeI | CATATG | 2 cut(s) | 260, 1246 |
| NheI | GCTAGC | 1 cut(s) | 613 |
| NlaIII | CATG | 7 cut(s) | 64, 85, 351, 492, 532, 1081, 1411 |
| NlaIV | GGNNCC | 2 cut(s) | 1769, 1902 |
| NmuCI | GTSAC | 1 cut(s) | 1059 |
| NspI | RCATGY | 2 cut(s) | 351, 1411 |
| PaeR7I | CTCGAG | 1 cut(s) | 428 |
| PasI | CCCWGGG | 1 cut(s) | 650 |
| PciSI | GCTCTTC | 1 cut(s) | 128 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 957 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1102 |
| PkrI | GCNGC | 7 cut(s) | 481, 793, 1117, 1165, 1456, 1606, 1693 |
| PleI | GAGTC | 3 cut(s) | 385, 736, 841 |
| PluTI | GGCGCC | 1 cut(s) | 1904 |
| PpsI | GAGTC | 3 cut(s) | 385, 736, 841 |
| PsiI | TTATAA | 1 cut(s) | 249 |
| Psp124BI | GAGCTC | 2 cut(s) | 72, 180 |
| Psp6I | CCWGG | 4 cut(s) | 203, 649, 670, 1233 |
| PspGI | CCWGG | 4 cut(s) | 203, 649, 670, 1233 |
| PspN4I | GGNNCC | 2 cut(s) | 1769, 1902 |
| PspPI | GGNCC | 2 cut(s) | 1042, 1348 |
| PstI | CTGCAG | 1 cut(s) | 481 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1454 |
| PsuI | RGATCY | 4 cut(s) | 411, 424, 781, 2364 |
| PvuII | CAGCTG | 2 cut(s) | 466, 1109 |
| RsaI | GTAC | 2 cut(s) | 1076, 1375 |
| RsaNI | GTAC | 2 cut(s) | 1075, 1374 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1641 |
| SacI | GAGCTC | 2 cut(s) | 72, 180 |
| SapI | GCTCTTC | 1 cut(s) | 128 |
| SaqAI | TTAA | 2 cut(s) | 225, 827 |
| SatI | GCNGC | 7 cut(s) | 480, 792, 1116, 1164, 1455, 1605, 1692 |
| Sau96I | GGNCC | 2 cut(s) | 1042, 1348 |
| SchI | GAGTC | 3 cut(s) | 386, 737, 841 |
| ScrFI | CCNGG | 5 cut(s) | 205, 651, 672, 1235, 1426 |
| SduI | GDGCHC | 4 cut(s) | 72, 180, 646, 2001 |
| SfaNI | GCATC | 8 cut(s) | 487, 826, 991, 1852, 1876, 1998, 2044, 2103 |
| SfcI | CTRYAG | 3 cut(s) | 477, 1110, 1905 |
| SfoI | GGCGCC | 1 cut(s) | 1902 |
| Sfr274I | CTCGAG | 1 cut(s) | 428 |
| SinI | GGWCC | 2 cut(s) | 1042, 1348 |
| SlaI | CTCGAG | 1 cut(s) | 428 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1641 |
| SmlI | CTYRAG | 3 cut(s) | 428, 707, 1703 |
| SmoI | CTYRAG | 3 cut(s) | 428, 707, 1703 |
| Sse9I | AATT | 6 cut(s) | 158, 459, 1017, 1334, 1619, 1750 |
| SsiI | CCGC | 8 cut(s) | 552, 609, 1004, 1045, 1214, 1510, 1814, 2063 |
| SspDI | GGCGCC | 1 cut(s) | 1900 |
| SspMI | CTAG | 6 cut(s) | 404, 614, 915, 1523, 1943, 2015 |
| SstI | GAGCTC | 2 cut(s) | 72, 180 |
| StyD4I | CCNGG | 5 cut(s) | 203, 649, 670, 1233, 1424 |
| StyI | CCWWGG | 1 cut(s) | 914 |
| TaaI | ACNGT | 2 cut(s) | 1028, 2003 |
| TaiI | ACGT | 1 cut(s) | 2486 |
| TaqI | TCGA | 7 cut(s) | 210, 387, 429, 506, 694, 951, 1086 |
| TasI | AATT | 6 cut(s) | 158, 459, 1017, 1334, 1619, 1750 |
| TatI | WGTACW | 1 cut(s) | 1074 |
| Tru1I | TTAA | 2 cut(s) | 225, 827 |
| Tru9I | TTAA | 2 cut(s) | 225, 827 |
| TscAI | CASTG | 2 cut(s) | 1068, 1678 |
| TseFI | GTSAC | 1 cut(s) | 1059 |
| TseI | GCWGC | 7 cut(s) | 479, 791, 1115, 1163, 1454, 1604, 1691 |
| Tsp45I | GTSAC | 1 cut(s) | 1059 |
| TspDTI | ATGAA | 8 cut(s) | 70, 115, 171, 348, 465, 1104, 2199, 2460 |
| TspRI | CASTG | 2 cut(s) | 1068, 1678 |
| VpaK11BI | GGWCC | 2 cut(s) | 1042, 1348 |
| XapI | RAATTY | 4 cut(s) | 158, 459, 1334, 1750 |
| XbaI | TCTAGA | 2 cut(s) | 1942, 2014 |
| XceI | RCATGY | 2 cut(s) | 351, 1411 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 1126, 1358 |
| XhoI | CTCGAG | 1 cut(s) | 428 |
| XmaJI | CCTAGG | 1 cut(s) | 914 |
| XmiI | GTMKAC | 1 cut(s) | 1341 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1102 |
| XspI | CTAG | 6 cut(s) | 404, 614, 915, 1523, 1943, 2015 |
| ZraI | GACGTC | 1 cut(s) | 2484 |