Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000005

Orthogroup ID

OG0000372

Physical Location & Seq

Genomic Coordinates Forward (+)

24104419 .. 24107331

Gene Structure 2913 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug05G0231200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1200 bp

ATGACCATCTTTGTTAACTGGTGCAGTCTTTGCTCTTCAATGGAGAAACTGAGAAAAGCCGTGAATGAAATGGCGTATACTCAACACCACGCTAAGCTCTCTCATCTTCAACTCTCTCTAATCCCCGTCCTCTTCTTCGCTTCCTCTCTCTACAAGGCCGCGCTCTCTCTCCGCCGCGCTCTCTACCATTCCGGCCTCTTAAGAAAGCACCGGTTGCGGGTGCCGGTGATCAGTGTTGGCAATTTGACATGGGGAGGCAATGGGAAAACTCCAATGGTGGAGTTCATTGCGAACTATTTAGCTGATTCAGGGATTTCACCTCTCATTCTGACCAGGGGTTATGCTGGTGGGGATGAGGCCAAGATGCTTCATAGGCATTTCCTTGGAAGGCCTGTTAAGATCGGTGTGGGTGCAAAGCGAGCAGCTGTTGCTGCTAGTTTTTTCGAAAGATATGGTCATGTTGAACCTAGCTCTAGTAAACTCTGCCATGGTCAGAAAGTGGGGAGTCATCTTAGTTCAGAAAAGATTGGCACTGTAATTCTTGATGATGGAATGCAGCACTGGAGCTTGCAGCGGAATCTGGAGATTGTTATGATTAATGGATTAACATTATGGGGCAACTGTCACTCAATCCCACGTGGACCGTTGAGGGAACCTCTCAGTGCACTTAGACGGGCAGATGTTGTTGTACTCCATCACGCAGATTTGGTTCCAGAACAAAATCTCGAAGATACTGACTTAATGCTAAGAGAAGTTAACAAGTCTGTTCCTGTTTTCTTCACAAAAATGGATCCTTGCTATTTCTTCGACGTGGGAAATGCCACCTCTAGAAAACATGTAGGAGATTTGTCTAACACTATTGTATTATGTGTTACTGCCATTGGTTCTGCAAATGCATTTGCAAAGGGAATAGAGAAGATTGGAGCATTTTATGTTGATCGACTTGAATTCAGTGACCACCACAAATTTCTGGCAAAGGATATTGAGATGATCAAAAGGAGGCTACGAGAACTGGAGGACAGGTTTAGTTCCAAGCCGGTTGTTATAGTAACAGAAAAGGATTATGATCGAGACCCATATATTTTCAAGCACTTGGATCCTTTTGAAGTTCTGGCACTCTGCTCTGAATTGAAGATCATACCTAACAGAGGATGCACTGAAGAAAGCTTCAAAAAGTTGTTGAAGGAGGTTAGCACATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003774 GO:0003777 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005856 GO:0005871 GO:0005874 GO:0005875 GO:0005886 GO:0006928 GO:0007017 GO:0007018 GO:0008150 GO:0009987 GO:0015630 GO:0016020 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0032991 GO:0035371 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0044422 GO:0044424 GO:0044430 GO:0044446 GO:0044464 GO:0071944 GO:0099080 GO:0099081 GO:0099512 GO:0099513 GO:1990752

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Kinesin

Protein Analysis

399

Amino Acids

44.82

Weight (kDa)

9.13

Isoelectric Point (pI)

35.95

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LpxK	PF02606	43 - 382	8.2e-64	Tetraacyldisaccharide-1-P 4'-kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000372)

Species	Orthologous Gene IDs
pyrus_communis	pycom04g09000
rosa_chinensis	RchiOBHm_Chr1g0319921 RchiOBHm_Chr2g0124671 RchiOBHm_Chr3g0488631 RchiOBHm_Chr3g0495191 RchiOBHm_Chr5g0067451 RchiOBHm_Chr6g0269581 RchiOBHm_Chr7g0210411 RchiOBHm_Chr7g0212341 RchiOBHm_Chr7g0214191
rosa_laevigata	RLG00000003882 RLG00000008030 RLG00000011591 RLG00000016235 RLG00000018631 RLG00000031951 RLG00000032135 RLG00000032548 RLG00000033239
rosa_multiflora	Rmu_sc0000281.1_g000015 Rmu_sc0000516.1_g000020 Rmu_sc0000816.1_g000025 Rmu_sc0001850.1_g000002 Rmu_sc0003260.1_g000025 Rmu_sc0007581.1_g000007 Rmu_sc0009241.1_g000001
rosa_roxburghii	Rroxscaffold_3G00218290 Rroxscaffold_3G00240930 Rroxscaffold_4G00300430 Rroxscaffold_5G00334810 Rroxscaffold_5G00360330 Rroxscaffold_7G00180190 Rroxscaffold_7G00192890
rosa_rugosa	Rorug01G0357800 Rorug01G0357900 Rorug03G0350400 Rorug05G0174000 Rorug05G0231100 Rorug05G0231100 Rorug05G0231200 Rorug05G0231200 Rorug05G0577100 Rorug07G0029800 Rorug07G0029900 Rorug07G0146200
rosa_samantha	Rh1AG039300 Rh1AG155100 Rh1AG173000 Rh1AG200900 Rh1AG276400 Rh1BG055400 Rh1BG111700 Rh1CG081000 Rh1CG161100 Rh1CG161200 Rh1CG247000 Rh1CG264000 Rh1DG031600 Rh1DG163400 Rh2AG236000 Rh2AG236100 Rh2AG277400 Rh2AG277500 Rh2AG309700 Rh2AG339600 Rh2BG221000 Rh2DG243300 Rh2DG243400 Rh2DG267900 Rh2DG434000 Rh3AG280300 Rh3AG288700 Rh3CG224100 Rh4AG043200 Rh4AG260400 Rh4BG266100 Rh4CG071300 Rh4DG155900 Rh5AG213100 Rh5AG238500 Rh5AG238600 Rh5AG296300 Rh5AG463800 Rh5CG236400 Rh5CG269500 Rh5CG269600 Rh5DG131600 Rh6AG074700 Rh6AG077500 Rh6AG093000 Rh6AG286000 Rh6CG246600 Rh7AG171100 Rh7AG303600 Rh7AG389400 Rh7AG390000 Rh7AG446200 Rh7CG251500 Rh7CG408700 Rh7DG385600
rosa_wichuraiana	Rw0G014360 Rw0G015950 Rw2G017860 Rw2G027110 Rw4G037790

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	220
AccI	GTMKAC	1 cut(s)	77
AccII	CGCG	2 cut(s)	161, 177
AciI	CCGC	5 cut(s)	159, 172, 175, 217, 574
AclWI	GGATC	4 cut(s)	785, 798, 1091, 1104
AcsI	RAATTY	2 cut(s)	947, 965
AcuI	CTGAAG	1 cut(s)	1179
AcvI	CACGTG	1 cut(s)	638
AfaI	GTAC	1 cut(s)	690
AfiI	CCNNNNNNNGG	2 cut(s)	217, 1148
AflII	CTTAAG	1 cut(s)	199
AflIII	ACRYGT	1 cut(s)	835
AgeI	ACCGGT	1 cut(s)	210
AgsI	TTSAA	9 cut(s)	39, 110, 464, 947, 1087, 1106, 1132, 1171, 1183
AjiI	CACGTC	1 cut(s)	811
AjnI	CCWGG	1 cut(s)	332
AluBI	AGCT	6 cut(s)	97, 302, 425, 471, 567, 1167
AluI	AGCT	6 cut(s)	97, 302, 425, 471, 567, 1167
Alw21I	GWGCWC	1 cut(s)	667
Alw26I	GTCTC	1 cut(s)	1065
Alw44I	GTGCAC	1 cut(s)	663
AlwI	GGATC	4 cut(s)	785, 798, 1091, 1104
AoxI	GGCC	4 cut(s)	156, 193, 357, 389
ApaLI	GTGCAC	1 cut(s)	663
ApeKI	GCWGC	4 cut(s)	422, 431, 556, 571
ApoI	RAATTY	2 cut(s)	947, 965
AseI	ATTAAT	1 cut(s)	597
AsiGI	ACCGGT	1 cut(s)	210
AspLEI	GCGC	2 cut(s)	163, 179
AspS9I	GGNCC	1 cut(s)	641
AsuHPI	GGTGA	2 cut(s)	238, 309
AsuII	TTCGAA	1 cut(s)	444
AvaII	GGWCC	1 cut(s)	641
BaeGI	GKGCMC	1 cut(s)	667
BamHI	GGATCC	2 cut(s)	790, 1096
BanI	GGYRCC	1 cut(s)	220
BbrPI	CACGTG	1 cut(s)	638
Bbv12I	GWGCWC	1 cut(s)	667
BbvI	GCAGC	4 cut(s)	418, 434, 568, 583
BccI	CCATC	3 cut(s)	14, 542, 702
BceAI	ACGGC	1 cut(s)	44
BciT130I	CCWGG	1 cut(s)	334
BclI	TGATCA	2 cut(s)	228, 990
BcoDI	GTCTC	1 cut(s)	1065
BfaI	CTAG	4 cut(s)	435, 468, 474, 828
BfrI	CTTAAG	1 cut(s)	199
BisI	GCNGC	6 cut(s)	159, 175, 423, 432, 557, 572
BlpI	GCTNAGC	1 cut(s)	93
BlsI	GCNGC	6 cut(s)	160, 176, 424, 433, 558, 573
Bme1390I	CCNGG	1 cut(s)	334
Bme18I	GGWCC	1 cut(s)	641
BmgBI	CACGTC	1 cut(s)	811
BmgT120I	GGNCC	1 cut(s)	641
BmiI	GGNNCC	5 cut(s)	222, 654, 711, 792, 1098
BmrFI	CCNGG	1 cut(s)	334
BmsI	GCATC	2 cut(s)	354, 1142
BplI	GAGNNNNNCTC	2 cut(s)	640, 672
BpmI	CTGGAG	3 cut(s)	583, 602, 1034
Bpu1102I	GCTNAGC	1 cut(s)	93
Bpu14I	TTCGAA	1 cut(s)	444
BsaAI	YACGTR	1 cut(s)	638
BsaBI	GATNNNNATC	1 cut(s)	1065
BsaI	GGTCTC	1 cut(s)	1065
BsaJI	CCNNGG	3 cut(s)	333, 382, 487
BsaWI	WCCGGW	1 cut(s)	210
BsaXI	ACNNNNNCTCC	2 cut(s)	1007, 1037
Bsc4I	CCNNNNNNNGG	2 cut(s)	217, 1148
Bse118I	RCCGGY	3 cut(s)	210, 223, 1036
Bse1I	ACTGG	3 cut(s)	23, 566, 1017
Bse3DI	GCAATG	2 cut(s)	265, 285
Bse8I	GATNNNNATC	1 cut(s)	1065
BseBI	CCWGG	1 cut(s)	334
BseDI	CCNNGG	3 cut(s)	333, 382, 487
BseGI	GGATG	2 cut(s)	358, 1157
BseJI	GATNNNNATC	1 cut(s)	1065
BseLI	CCNNNNNNNGG	2 cut(s)	217, 1148
BseMI	GCAATG	2 cut(s)	265, 285
BseMII	CTCAG	2 cut(s)	41, 673
BseNI	ACTGG	3 cut(s)	23, 566, 1017
BseSI	GKGCMC	1 cut(s)	667
BseXI	GCAGC	4 cut(s)	418, 434, 568, 583
BsgI	GTGCAG	1 cut(s)	43
Bsh1236I	CGCG	2 cut(s)	161, 177
BshFI	GGCC	4 cut(s)	158, 195, 359, 391
BshNI	GGYRCC	1 cut(s)	220
BshTI	ACCGGT	1 cut(s)	210
BsiHKAI	GWGCWC	1 cut(s)	667
BsiSI	CCGG	4 cut(s)	192, 211, 224, 1037
BslI	CCNNNNNNNGG	2 cut(s)	217, 1148
BsmAI	GTCTC	1 cut(s)	1065
BsmI	GAATGC	1 cut(s)	558
BsnI	GGCC	4 cut(s)	158, 195, 359, 391
Bso31I	GGTCTC	1 cut(s)	1065
Bsp119I	TTCGAA	1 cut(s)	444
Bsp1286I	GDGCHC	1 cut(s)	667
Bsp143I	GATC	8 cut(s)	228, 399, 790, 937, 990, 1066, 1096, 1134
Bsp1720I	GCTNAGC	1 cut(s)	93
Bsp19I	CCATGG	1 cut(s)	487
BspACI	CCGC	5 cut(s)	159, 172, 175, 217, 574
BspANI	GGCC	4 cut(s)	158, 195, 359, 391
BspCNI	CTCAG	2 cut(s)	42, 672
BspFNI	CGCG	2 cut(s)	161, 177
BspLI	GGNNCC	5 cut(s)	222, 654, 711, 792, 1098
BspPI	GGATC	4 cut(s)	785, 798, 1091, 1104
BspQI	GCTCTTC	1 cut(s)	40
BspT104I	TTCGAA	1 cut(s)	444
BspT107I	GGYRCC	1 cut(s)	220
BspTI	CTTAAG	1 cut(s)	199
BspTNI	GGTCTC	1 cut(s)	1065
BsrDI	GCAATG	2 cut(s)	265, 285
BsrFI	RCCGGY	3 cut(s)	210, 223, 1036
BsrI	ACTGG	3 cut(s)	23, 566, 1017
BssAI	RCCGGY	3 cut(s)	210, 223, 1036
BssECI	CCNNGG	3 cut(s)	333, 382, 487
BssMI	GATC	8 cut(s)	228, 399, 790, 937, 990, 1066, 1096, 1134
BssNAI	GTATAC	1 cut(s)	78
BssT1I	CCWWGG	2 cut(s)	382, 487
Bst1107I	GTATAC	1 cut(s)	78
Bst2UI	CCWGG	1 cut(s)	334
Bst4CI	ACNGT	3 cut(s)	535, 623, 645
Bst6I	CTCTTC	2 cut(s)	40, 137
BstAFI	CTTAAG	1 cut(s)	199
BstAPI	GCANNNNNTGC	3 cut(s)	30, 214, 428
BstBAI	YACGTR	1 cut(s)	638
BstBI	TTCGAA	1 cut(s)	444
BstC8I	GCNNGC	2 cut(s)	420, 569
BstDEI	CTNAG	6 cut(s)	50, 93, 512, 659, 668, 746
BstDSI	CCRYGG	1 cut(s)	487
BstENI	CCTNNNNNAGG	1 cut(s)	1146
BstF5I	GGATG	2 cut(s)	358, 1157
BstFNI	CGCG	2 cut(s)	161, 177
BstHHI	GCGC	2 cut(s)	163, 179
BstKTI	GATC	8 cut(s)	231, 402, 793, 940, 993, 1069, 1099, 1137
BstMAI	GTCTC	1 cut(s)	1065
BstMBI	GATC	8 cut(s)	228, 399, 790, 937, 990, 1066, 1096, 1134
BstMWI	GCNNNNNNNGC	6 cut(s)	30, 214, 373, 419, 428, 431
BstNI	CCWGG	1 cut(s)	334
BstNSI	RCATGY	1 cut(s)	839
BstSCI	CCNGG	1 cut(s)	332
BstSLI	GKGCMC	1 cut(s)	667
BstUI	CGCG	2 cut(s)	161, 177
BstV1I	GCAGC	4 cut(s)	418, 434, 568, 583
BstX2I	RGATCY	2 cut(s)	790, 1096
BstYI	RGATCY	2 cut(s)	790, 1096
BstZ17I	GTATAC	1 cut(s)	78
BsuRI	GGCC	4 cut(s)	158, 195, 359, 391
BtgI	CCRYGG	1 cut(s)	487
BtrI	CACGTC	1 cut(s)	811
BtsCI	GGATG	2 cut(s)	358, 1157
BtsIMutI	CAGTG	6 cut(s)	238, 531, 559, 667, 958, 1155
Cac8I	GCNNGC	2 cut(s)	420, 569
CfoI	GCGC	2 cut(s)	163, 179
Cfr10I	RCCGGY	3 cut(s)	210, 223, 1036
Cfr13I	GGNCC	1 cut(s)	641
Csp6I	GTAC	1 cut(s)	689
CspAI	ACCGGT	1 cut(s)	210
CviAII	CATG	5 cut(s)	249, 458, 488, 836, 1197
CviQI	GTAC	1 cut(s)	689
DdeI	CTNAG	6 cut(s)	50, 93, 512, 659, 668, 746
DpnI	GATC	8 cut(s)	230, 401, 792, 939, 992, 1068, 1098, 1136
DpnII	GATC	8 cut(s)	228, 399, 790, 937, 990, 1066, 1096, 1134
Eam1104I	CTCTTC	2 cut(s)	40, 137
EarI	CTCTTC	2 cut(s)	40, 137
EciI	GGCGGA	1 cut(s)	161
Eco130I	CCWWGG	2 cut(s)	382, 487
Eco147I	AGGCCT	1 cut(s)	391
Eco31I	GGTCTC	1 cut(s)	1065
Eco47I	GGWCC	1 cut(s)	641
Eco57I	CTGAAG	1 cut(s)	1179
Eco72I	CACGTG	1 cut(s)	638
EcoNI	CCTNNNNNAGG	1 cut(s)	1146
EcoRI	GAATTC	1 cut(s)	947
EcoRII	CCWGG	1 cut(s)	332
EcoT14I	CCWWGG	2 cut(s)	382, 487
EcoT22I	ATGCAT	1 cut(s)	898
ErhI	CCWWGG	2 cut(s)	382, 487
FaeI	CATG	5 cut(s)	252, 461, 491, 839, 1200
FatI	CATG	5 cut(s)	248, 457, 487, 835, 1196
FauI	CCCGC	1 cut(s)	210
FbaI	TGATCA	2 cut(s)	228, 990
FblI	GTMKAC	1 cut(s)	77
Fnu4HI	GCNGC	6 cut(s)	159, 175, 423, 432, 557, 572
FokI	GGATG	2 cut(s)	365, 1164
Fsp4HI	GCNGC	6 cut(s)	159, 175, 423, 432, 557, 572
FspBI	CTAG	4 cut(s)	435, 468, 474, 828
GlaI	GCGC	2 cut(s)	162, 178
GluI	GCNGC	6 cut(s)	159, 175, 423, 432, 557, 572
GsuI	CTGGAG	3 cut(s)	583, 602, 1034
HaeIII	GGCC	4 cut(s)	158, 195, 359, 391
HapII	CCGG	4 cut(s)	192, 211, 224, 1037
HhaI	GCGC	2 cut(s)	163, 179
Hin1II	CATG	5 cut(s)	252, 461, 491, 839, 1200
Hin6I	GCGC	2 cut(s)	161, 177
HinP1I	GCGC	2 cut(s)	161, 177
HincII	GTYRAC	2 cut(s)	16, 757
HindII	GTYRAC	2 cut(s)	16, 757
HindIII	AAGCTT	1 cut(s)	1165
HinfI	GANTC	3 cut(s)	305, 505, 577
HpaI	GTTAAC	2 cut(s)	16, 757
HpaII	CCGG	4 cut(s)	192, 211, 224, 1037
HphI	GGTGA	2 cut(s)	238, 309
Hpy166II	GTNNAC	6 cut(s)	16, 78, 479, 641, 665, 757
Hpy188I	TCNGA	4 cut(s)	330, 495, 520, 1126
Hpy188III	TCNNGA	6 cut(s)	542, 581, 713, 725, 828, 1070
Hpy8I	GTNNAC	6 cut(s)	16, 78, 479, 641, 665, 757
Hpy99I	CGWCG	1 cut(s)	812
HpyAV	CCTTC	2 cut(s)	381, 1177
HpyCH4III	ACNGT	3 cut(s)	535, 623, 645
HpyCH4IV	ACGT	2 cut(s)	637, 810
HpyCH4V	TGCA	9 cut(s)	24, 413, 556, 571, 665, 890, 896, 902, 1155
HpyF10VI	GCNNNNNNNGC	6 cut(s)	30, 214, 373, 419, 428, 431
HpyF3I	CTNAG	6 cut(s)	50, 93, 512, 659, 668, 746
HpySE526I	ACGT	2 cut(s)	637, 810
Hsp92II	CATG	5 cut(s)	252, 461, 491, 839, 1200
HspAI	GCGC	2 cut(s)	161, 177
Ksp22I	TGATCA	2 cut(s)	228, 990
KspAI	GTTAAC	2 cut(s)	16, 757
Kzo9I	GATC	8 cut(s)	228, 399, 790, 937, 990, 1066, 1096, 1134
LguI	GCTCTTC	1 cut(s)	40
LmnI	GCTCC	2 cut(s)	564, 923
Lsp1109I	GCAGC	4 cut(s)	418, 434, 568, 583
LweI	GCATC	2 cut(s)	354, 1142
MaeI	CTAG	4 cut(s)	435, 468, 474, 828
MaeII	ACGT	2 cut(s)	637, 810
MaeIII	GTNAC	4 cut(s)	623, 871, 953, 1048
MalI	GATC	8 cut(s)	230, 401, 792, 939, 992, 1068, 1098, 1136
MboI	GATC	8 cut(s)	228, 399, 790, 937, 990, 1066, 1096, 1134
MflI	RGATCY	2 cut(s)	790, 1096
MhlI	GDGCHC	1 cut(s)	667
MluCI	AATT	5 cut(s)	241, 537, 947, 965, 1127
MlyI	GAGTC	1 cut(s)	514
Mph1103I	ATGCAT	1 cut(s)	898
MseI	TTAA	7 cut(s)	15, 200, 396, 597, 605, 740, 756
MslI	CAYNNNNRTG	1 cut(s)	785
MspA1I	CMGCKG	2 cut(s)	425, 574
MspCI	CTTAAG	1 cut(s)	199
MspI	CCGG	4 cut(s)	192, 211, 224, 1037
MspR9I	CCNGG	1 cut(s)	334
Mva1269I	GAATGC	1 cut(s)	558
MvaI	CCWGG	1 cut(s)	334
MvnI	CGCG	2 cut(s)	161, 177
MwoI	GCNNNNNNNGC	6 cut(s)	30, 214, 373, 419, 428, 431
NcoI	CCATGG	1 cut(s)	487
NdeII	GATC	8 cut(s)	228, 399, 790, 937, 990, 1066, 1096, 1134
NlaIII	CATG	5 cut(s)	252, 461, 491, 839, 1200
NlaIV	GGNNCC	5 cut(s)	222, 654, 711, 792, 1098
NmuCI	GTSAC	2 cut(s)	623, 953
NsiI	ATGCAT	1 cut(s)	898
NspI	RCATGY	1 cut(s)	839
NspV	TTCGAA	1 cut(s)	444
PceI	AGGCCT	1 cut(s)	391
PciI	ACATGT	1 cut(s)	835
PciSI	GCTCTTC	1 cut(s)	40
PctI	GAATGC	1 cut(s)	558
PfeI	GAWTC	2 cut(s)	305, 577
PinAI	ACCGGT	1 cut(s)	210
PkrI	GCNGC	6 cut(s)	160, 176, 424, 433, 558, 573
PleI	GAGTC	1 cut(s)	513
PmaCI	CACGTG	1 cut(s)	638
PmlI	CACGTG	1 cut(s)	638
PpsI	GAGTC	1 cut(s)	513
Ppu21I	YACGTR	1 cut(s)	638
PscI	ACATGT	1 cut(s)	835
PshBI	ATTAAT	1 cut(s)	597
Psp6I	CCWGG	1 cut(s)	332
PspCI	CACGTG	1 cut(s)	638
PspGI	CCWGG	1 cut(s)	332
PspN4I	GGNNCC	5 cut(s)	222, 654, 711, 792, 1098
PspPI	GGNCC	1 cut(s)	641
PsuI	RGATCY	2 cut(s)	790, 1096
PvuII	CAGCTG	1 cut(s)	425
RsaI	GTAC	1 cut(s)	690
RsaNI	GTAC	1 cut(s)	689
RseI	CAYNNNNRTG	1 cut(s)	785
SapI	GCTCTTC	1 cut(s)	40
SaqAI	TTAA	7 cut(s)	15, 200, 396, 597, 605, 740, 756
SatI	GCNGC	6 cut(s)	159, 175, 423, 432, 557, 572
Sau3AI	GATC	8 cut(s)	228, 399, 790, 937, 990, 1066, 1096, 1134
Sau96I	GGNCC	1 cut(s)	641
SchI	GAGTC	1 cut(s)	514
ScrFI	CCNGG	1 cut(s)	334
SduI	GDGCHC	1 cut(s)	667
SfaNI	GCATC	2 cut(s)	354, 1142
SfuI	TTCGAA	1 cut(s)	444
SinI	GGWCC	1 cut(s)	641
SmiMI	CAYNNNNRTG	1 cut(s)	785
SmlI	CTYRAG	1 cut(s)	199
SmoI	CTYRAG	1 cut(s)	199
Sse9I	AATT	5 cut(s)	241, 537, 947, 965, 1127
SseBI	AGGCCT	1 cut(s)	391
SsiI	CCGC	5 cut(s)	159, 172, 175, 217, 574
SspMI	CTAG	4 cut(s)	435, 468, 474, 828
StuI	AGGCCT	1 cut(s)	391
StyD4I	CCNGG	1 cut(s)	332
StyI	CCWWGG	2 cut(s)	382, 487
TaaI	ACNGT	3 cut(s)	535, 623, 645
TaiI	ACGT	2 cut(s)	640, 813
TaqI	TCGA	5 cut(s)	444, 726, 807, 940, 1069
TasI	AATT	5 cut(s)	241, 537, 947, 965, 1127
TatI	WGTACW	1 cut(s)	688
TauI	GCSGC	2 cut(s)	161, 177
TfiI	GAWTC	2 cut(s)	305, 577
Tru1I	TTAA	7 cut(s)	15, 200, 396, 597, 605, 740, 756
Tru9I	TTAA	7 cut(s)	15, 200, 396, 597, 605, 740, 756
TscAI	CASTG	6 cut(s)	238, 538, 566, 667, 958, 1162
TseFI	GTSAC	2 cut(s)	623, 953
TseI	GCWGC	4 cut(s)	422, 431, 556, 571
Tsp45I	GTSAC	2 cut(s)	623, 953
TspDTI	ATGAA	3 cut(s)	81, 274, 359
TspRI	CASTG	6 cut(s)	238, 538, 566, 667, 958, 1162
Vha464I	CTTAAG	1 cut(s)	199
VneI	GTGCAC	1 cut(s)	663
VpaK11BI	GGWCC	1 cut(s)	641
VspI	ATTAAT	1 cut(s)	597
XagI	CCTNNNNNAGG	1 cut(s)	1146
XapI	RAATTY	2 cut(s)	947, 965
XbaI	TCTAGA	1 cut(s)	827
XceI	RCATGY	1 cut(s)	839
XmiI	GTMKAC	1 cut(s)	77
XspI	CTAG	4 cut(s)	435, 468, 474, 828
Zsp2I	ATGCAT	1 cut(s)	898

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.