Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr4

Orthogroup ID

OG0000372

Physical Location & Seq

Genomic Coordinates Reverse (-)

33019432 .. 33025228

Gene Structure 5797 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000018631

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1182 bp

ATGGCTCCGACTCAGCCTGGACAGCACCTCCACATCACCGGTGCCGCCGACACTGCATTTCAGGACGAACAGGGAGCCAGCGGAGTCAGAGGCGACGATGGGCATGGCGTGGAAGGCAGCGACCTGAGGCTGGAAGAATCGAACGTAGCGGTGCGCCACCTCGAGCATGGTGGCGACATAAACCTTGCCTGCATCGAAGCTTACTCCGATCTCTTCGTTTTCATCACCGACGGCGAAGCTGATAGCTGCTTCTACAGTATCAGCACTGACTCGCCGGTAATCGGATCCCTTCAGATCGTTCAGGTCGATCCGGCGTCGACCTTGAAGGAGACAATGAAGGCTGCGGTCTCCGGGAACTGCTCCATTATTAGCATCTTGGCGTCCCGGTACTCGAAGAGGAAGAGCAATAGTGTACCAAATGATGCACTGGAGCATGATGACTTGGACCATAAGGTTGCCGGACTCCTGGATTTGTTACTCATATCTTTTGTTGGTACTGATGGTGTGGGAACTAAACTTAAGCTTGCATTTGACACTGAATTCATGAGACCTTTGGTTGCCATTAGTTATGATGATATTGTCACTTTTGGAGCCAAGCCATTATTTTTCCTTGATTACTTTGCTACAAGCCGCCTTGATGTTGATCTTGCTGAAAAGGTTATCAAGGGAATTGTCGATGTGAATTGCATATATTTTCAGACTGCCAAGATGCCGGGTTTCTATGCAGAGGGTGAGTATGACCTCAATGGTTTTGTAGTTGTAATTGTGAACAAGGAATCAGTGATTGATGATAAGAATATTGTGGCTGGAGATGTCCTCATTGGCCTACCATCCAGTGGAGTTCATTCCAGTGCTTTTTCTCTTGTAAGAAGGGTTCTAGCTCATAGTGGGTTGTCTCTGAAGCACCAATTACCGGCTCTGATGGGGCCCACAGTGATATATCTTAAGCGGCAAGGGAGGTGTAAAGGGTTAGCCCACATCACAGGAGGTGATTTCACCAACAATATACCTAGAGTATTTCCAAAAGGCCTAGGAGCTATCATCTATAATCATTCATGGGAAGTCCAAGCTGTTTTCAAATGGATCCAAGAGGCTGGAAGAGTAGAAGATGCTGAAATGAGACGAACTTTTAATATGGGTATTGGGATGGTTCTTGTTGTGAGTAAGGAGGCATCCCACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0003674 GO:0005488 GO:0005507 GO:0005524 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0008144 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0017076 GO:0030554 GO:0032553 GO:0032555 GO:0032559 GO:0035639 GO:0036094 GO:0043167 GO:0043168 GO:0043169 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046872 GO:0046914 GO:0097159 GO:0097367 GO:1901265 GO:1901363

KEGG Pathways

Metabolic & Signaling

ko00230 ko01100 ko01110 ko01130 map00230 map01100 map01110 map01130

Pfam Domains

Protein Families

AIRS AIRS_C

Protein Analysis

394

Amino Acids

42.55

Weight (kDa)

5.28

Isoelectric Point (pI)

32.99

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AIRS	PF00586	164 - 227	7.1e-07	AIR synthase related protein, N-terminal domain
AIRS_C	PF02769	269 - 391	2.9e-21	AIR synthase related protein, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0000372)

Species	Orthologous Gene IDs
pyrus_communis	pycom04g09000
rosa_chinensis	RchiOBHm_Chr1g0319921 RchiOBHm_Chr2g0124671 RchiOBHm_Chr3g0488631 RchiOBHm_Chr3g0495191 RchiOBHm_Chr5g0067451 RchiOBHm_Chr6g0269581 RchiOBHm_Chr7g0210411 RchiOBHm_Chr7g0212341 RchiOBHm_Chr7g0214191
rosa_laevigata	RLG00000003882 RLG00000008030 RLG00000011591 RLG00000016235 RLG00000018631 RLG00000031951 RLG00000032135 RLG00000032548 RLG00000033239
rosa_multiflora	Rmu_sc0000281.1_g000015 Rmu_sc0000516.1_g000020 Rmu_sc0000816.1_g000025 Rmu_sc0001850.1_g000002 Rmu_sc0003260.1_g000025 Rmu_sc0007581.1_g000007 Rmu_sc0009241.1_g000001
rosa_roxburghii	Rroxscaffold_3G00218290 Rroxscaffold_3G00240930 Rroxscaffold_4G00300430 Rroxscaffold_5G00334810 Rroxscaffold_5G00360330 Rroxscaffold_7G00180190 Rroxscaffold_7G00192890
rosa_rugosa	Rorug01G0357800 Rorug01G0357900 Rorug03G0350400 Rorug05G0174000 Rorug05G0231100 Rorug05G0231100 Rorug05G0231200 Rorug05G0231200 Rorug05G0577100 Rorug07G0029800 Rorug07G0029900 Rorug07G0146200
rosa_samantha	Rh1AG039300 Rh1AG155100 Rh1AG173000 Rh1AG200900 Rh1AG276400 Rh1BG055400 Rh1BG111700 Rh1CG081000 Rh1CG161100 Rh1CG161200 Rh1CG247000 Rh1CG264000 Rh1DG031600 Rh1DG163400 Rh2AG236000 Rh2AG236100 Rh2AG277400 Rh2AG277500 Rh2AG309700 Rh2AG339600 Rh2BG221000 Rh2DG243300 Rh2DG243400 Rh2DG267900 Rh2DG434000 Rh3AG280300 Rh3AG288700 Rh3CG224100 Rh4AG043200 Rh4AG260400 Rh4BG266100 Rh4CG071300 Rh4DG155900 Rh5AG213100 Rh5AG238500 Rh5AG238600 Rh5AG296300 Rh5AG463800 Rh5CG236400 Rh5CG269500 Rh5CG269600 Rh5DG131600 Rh6AG074700 Rh6AG077500 Rh6AG093000 Rh6AG286000 Rh6CG246600 Rh7AG171100 Rh7AG303600 Rh7AG389400 Rh7AG390000 Rh7AG446200 Rh7CG251500 Rh7CG408700 Rh7DG385600
rosa_wichuraiana	Rw0G014360 Rw0G015950 Rw2G017860 Rw2G027110 Rw4G037790

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	41
AccB7I	CCANNNNNTGG	1 cut(s)	836
AccI	GTMKAC	1 cut(s)	317
AciI	CCGC	6 cut(s)	45, 81, 149, 344, 631, 949
AclWI	GGATC	5 cut(s)	279, 292, 302, 1078, 1091
AcsI	RAATTY	1 cut(s)	539
AcuI	CTGAAG	2 cut(s)	275, 920
AcyI	GRCGYC	2 cut(s)	314, 380
AfaI	GTAC	3 cut(s)	389, 414, 496
AfiI	CCNNNNNNNGG	4 cut(s)	130, 281, 836, 913
AflII	CTTAAG	2 cut(s)	518, 944
AgeI	ACCGGT	1 cut(s)	38
AgsI	TTSAA	2 cut(s)	325, 1078
AjnI	CCWGG	2 cut(s)	16, 465
AluBI	AGCT	7 cut(s)	200, 239, 246, 523, 881, 1037, 1070
AluI	AGCT	7 cut(s)	200, 239, 246, 523, 881, 1037, 1070
Alw26I	GTCTC	5 cut(s)	323, 352, 541, 900, 1114
AlwI	GGATC	5 cut(s)	279, 292, 302, 1078, 1091
Ama87I	CYCGRG	1 cut(s)	161
AoxI	GGCC	3 cut(s)	823, 926, 1027
ApaI	GGGCCC	1 cut(s)	930
ApeKI	GCWGC	3 cut(s)	117, 246, 341
ApoI	RAATTY	1 cut(s)	539
AsiGI	ACCGGT	1 cut(s)	38
AspA2I	CCTAGG	1 cut(s)	1030
AspLEI	GCGC	1 cut(s)	156
AspS9I	GGNCC	3 cut(s)	445, 926, 927
AsuC2I	CCSGG	3 cut(s)	352, 385, 714
AsuHPI	GGTGA	5 cut(s)	28, 217, 743, 988, 1001
AvaI	CYCGRG	1 cut(s)	161
AvaII	GGWCC	1 cut(s)	445
AvrII	CCTAGG	1 cut(s)	1030
AxyI	CCTNAGG	1 cut(s)	125
BaeGI	GKGCMC	1 cut(s)	930
BamHI	GGATCC	2 cut(s)	284, 1083
BanI	GGYRCC	1 cut(s)	41
BanII	GRGCYC	1 cut(s)	930
BbvI	GCAGC	3 cut(s)	129, 233, 328
BccI	CCATC	5 cut(s)	92, 494, 838, 916, 1141
BceAI	ACGGC	1 cut(s)	247
BciT130I	CCWGG	2 cut(s)	18, 467
BcnI	CCSGG	3 cut(s)	352, 385, 714
BcoDI	GTCTC	5 cut(s)	323, 352, 541, 900, 1114
BfaI	CTAG	3 cut(s)	878, 1011, 1031
BfmI	CTRYAG	1 cut(s)	253
BfrI	CTTAAG	2 cut(s)	518, 944
BisI	GCNGC	6 cut(s)	45, 118, 247, 342, 631, 950
BlnI	CCTAGG	1 cut(s)	1030
BlsI	GCNGC	6 cut(s)	46, 119, 248, 343, 632, 951
Bme1390I	CCNGG	5 cut(s)	18, 352, 385, 467, 714
Bme18I	GGWCC	1 cut(s)	445
BmeT110I	CYCGRG	1 cut(s)	161
BmgT120I	GGNCC	3 cut(s)	445, 926, 927
BmiI	GGNNCC	8 cut(s)	6, 43, 76, 286, 592, 927, 928, 1085
BmrFI	CCNGG	5 cut(s)	18, 352, 385, 467, 714
BmsI	GCATC	5 cut(s)	201, 381, 412, 699, 1099
BplI	GAGNNNNNCTC	2 cut(s)	801, 833
BpmI	CTGGAG	2 cut(s)	449, 828
BpuMI	CCSGG	3 cut(s)	352, 385, 714
BsaBI	GATNNNNATC	1 cut(s)	642
BsaHI	GRCGYC	2 cut(s)	314, 380
BsaI	GGTCTC	2 cut(s)	352, 541
BsaJI	CCNNGG	1 cut(s)	1030
BsaWI	WCCGGW	1 cut(s)	38
BsaXI	ACNNNNNCTCC	2 cut(s)	12, 42
Bsc4I	CCNNNNNNNGG	4 cut(s)	130, 281, 836, 913
Bse118I	RCCGGY	3 cut(s)	38, 274, 913
Bse1I	ACTGG	3 cut(s)	432, 834, 849
Bse21I	CCTNAGG	1 cut(s)	125
Bse8I	GATNNNNATC	1 cut(s)	642
BseBI	CCWGG	2 cut(s)	18, 467
BseDI	CCNNGG	1 cut(s)	1030
BseGI	GGATG	3 cut(s)	830, 1152, 1172
BseJI	GATNNNNATC	1 cut(s)	642
BseLI	CCNNNNNNNGG	4 cut(s)	130, 281, 836, 913
BseMII	CTCAG	2 cut(s)	26, 116
BseNI	ACTGG	3 cut(s)	432, 834, 849
BseSI	GKGCMC	1 cut(s)	930
BseXI	GCAGC	3 cut(s)	129, 233, 328
BshFI	GGCC	3 cut(s)	825, 928, 1029
BshNI	GGYRCC	1 cut(s)	41
BshTI	ACCGGT	1 cut(s)	38
BsiHKCI	CYCGRG	1 cut(s)	161
BsiSI	CCGG	8 cut(s)	39, 275, 311, 351, 385, 459, 713, 914
BslFI	GGGAC	1 cut(s)	367
BslI	CCNNNNNNNGG	4 cut(s)	130, 281, 836, 913
BsmAI	GTCTC	5 cut(s)	323, 352, 541, 900, 1114
BsmBI	CGTCTC	1 cut(s)	1114
BsmFI	GGGAC	1 cut(s)	367
BsnI	GGCC	3 cut(s)	825, 928, 1029
Bso31I	GGTCTC	2 cut(s)	352, 541
BsoBI	CYCGRG	1 cut(s)	161
Bsp120I	GGGCCC	1 cut(s)	926
Bsp1286I	GDGCHC	1 cut(s)	930
Bsp143I	GATC	6 cut(s)	208, 284, 294, 307, 643, 1083
BspACI	CCGC	6 cut(s)	45, 81, 149, 344, 631, 949
BspANI	GGCC	3 cut(s)	825, 928, 1029
BspCNI	CTCAG	2 cut(s)	25, 117
BspHI	TCATGA	1 cut(s)	543
BspLI	GGNNCC	8 cut(s)	6, 43, 76, 286, 592, 927, 928, 1085
BspPI	GGATC	5 cut(s)	279, 292, 302, 1078, 1091
BspQI	GCTCTTC	1 cut(s)	395
BspT107I	GGYRCC	1 cut(s)	41
BspTI	CTTAAG	2 cut(s)	518, 944
BspTNI	GGTCTC	2 cut(s)	352, 541
BsrFI	RCCGGY	3 cut(s)	38, 274, 913
BsrI	ACTGG	3 cut(s)	432, 834, 849
BssAI	RCCGGY	3 cut(s)	38, 274, 913
BssECI	CCNNGG	1 cut(s)	1030
BssMI	GATC	6 cut(s)	208, 284, 294, 307, 643, 1083
BssNI	GRCGYC	2 cut(s)	314, 380
BssT1I	CCWWGG	1 cut(s)	1030
Bst2UI	CCWGG	2 cut(s)	18, 467
Bst4CI	ACNGT	2 cut(s)	257, 934
Bst6I	CTCTTC	4 cut(s)	218, 389, 395, 1093
BstACI	GRCGYC	2 cut(s)	314, 380
BstAFI	CTTAAG	2 cut(s)	518, 944
BstC8I	GCNNGC	3 cut(s)	79, 190, 525
BstDEI	CTNAG	2 cut(s)	12, 125
BstF5I	GGATG	3 cut(s)	830, 1152, 1172
BstHHI	GCGC	1 cut(s)	156
BstKTI	GATC	6 cut(s)	211, 287, 297, 310, 646, 1086
BstMAI	GTCTC	5 cut(s)	323, 352, 541, 900, 1114
BstMBI	GATC	6 cut(s)	208, 284, 294, 307, 643, 1083
BstMWI	GCNNNNNNNGC	3 cut(s)	22, 53, 114
BstNI	CCWGG	2 cut(s)	18, 467
BstSCI	CCNGG	5 cut(s)	16, 350, 383, 465, 712
BstSFI	CTRYAG	1 cut(s)	253
BstSLI	GKGCMC	1 cut(s)	930
BstV1I	GCAGC	3 cut(s)	129, 233, 328
BstX2I	RGATCY	2 cut(s)	284, 1083
BstXI	CCANNNNNNTGG	1 cut(s)	1094
BstYI	RGATCY	2 cut(s)	284, 1083
Bsu36I	CCTNAGG	1 cut(s)	125
BsuRI	GGCC	3 cut(s)	825, 928, 1029
BtsCI	GGATG	3 cut(s)	830, 1152, 1172
BtsI	GCAGTG	1 cut(s)	51
BtsIMutI	CAGTG	9 cut(s)	51, 264, 425, 534, 786, 841, 856, 939, 1177
Cac8I	GCNNGC	3 cut(s)	79, 190, 525
CciI	TCATGA	1 cut(s)	543
CfoI	GCGC	1 cut(s)	156
Cfr10I	RCCGGY	3 cut(s)	38, 274, 913
Cfr13I	GGNCC	3 cut(s)	445, 926, 927
CseI	GACGC	2 cut(s)	303, 369
Csp6I	GTAC	3 cut(s)	388, 413, 495
CspAI	ACCGGT	1 cut(s)	38
CviAII	CATG	5 cut(s)	104, 167, 434, 544, 1056
CviQI	GTAC	3 cut(s)	388, 413, 495
DdeI	CTNAG	2 cut(s)	12, 125
DpnI	GATC	6 cut(s)	210, 286, 296, 309, 645, 1085
DpnII	GATC	6 cut(s)	208, 284, 294, 307, 643, 1083
Eam1104I	CTCTTC	4 cut(s)	218, 389, 395, 1093
EarI	CTCTTC	4 cut(s)	218, 389, 395, 1093
Eco130I	CCWWGG	1 cut(s)	1030
Eco147I	AGGCCT	1 cut(s)	1029
Eco24I	GRGCYC	1 cut(s)	930
Eco31I	GGTCTC	2 cut(s)	352, 541
Eco47I	GGWCC	1 cut(s)	445
Eco57I	CTGAAG	2 cut(s)	275, 920
Eco81I	CCTNAGG	1 cut(s)	125
Eco88I	CYCGRG	1 cut(s)	161
EcoO109I	RGGNCCY	1 cut(s)	926
EcoRI	GAATTC	1 cut(s)	539
EcoRII	CCWGG	2 cut(s)	16, 465
EcoT14I	CCWWGG	1 cut(s)	1030
EcoT38I	GRGCYC	1 cut(s)	930
ErhI	CCWWGG	1 cut(s)	1030
Esp3I	CGTCTC	1 cut(s)	1114
FaeI	CATG	5 cut(s)	107, 170, 437, 547, 1059
FaqI	GGGAC	1 cut(s)	367
FatI	CATG	5 cut(s)	103, 166, 433, 543, 1055
FblI	GTMKAC	1 cut(s)	317
Fnu4HI	GCNGC	6 cut(s)	45, 118, 247, 342, 631, 950
FokI	GGATG	3 cut(s)	817, 1159, 1159
FriOI	GRGCYC	1 cut(s)	930
Fsp4HI	GCNGC	6 cut(s)	45, 118, 247, 342, 631, 950
FspBI	CTAG	3 cut(s)	878, 1011, 1031
GlaI	GCGC	1 cut(s)	155
GluI	GCNGC	6 cut(s)	45, 118, 247, 342, 631, 950
GsuI	CTGGAG	2 cut(s)	449, 828
HaeIII	GGCC	3 cut(s)	825, 928, 1029
HapII	CCGG	8 cut(s)	39, 275, 311, 351, 385, 459, 713, 914
HgaI	GACGC	2 cut(s)	303, 369
HhaI	GCGC	1 cut(s)	156
Hin1I	GRCGYC	2 cut(s)	314, 380
Hin1II	CATG	5 cut(s)	107, 170, 437, 547, 1059
Hin6I	GCGC	1 cut(s)	154
HinP1I	GCGC	1 cut(s)	154
HincII	GTYRAC	1 cut(s)	318
HindII	GTYRAC	1 cut(s)	318
HindIII	AAGCTT	2 cut(s)	198, 521
HinfI	GANTC	6 cut(s)	10, 84, 137, 269, 462, 776
HpaII	CCGG	8 cut(s)	39, 275, 311, 351, 385, 459, 713, 914
HphI	GGTGA	5 cut(s)	28, 217, 743, 988, 1001
Hpy166II	GTNNAC	3 cut(s)	318, 413, 769
Hpy188I	TCNGA	8 cut(s)	9, 89, 208, 284, 294, 699, 900, 921
Hpy188III	TCNNGA	2 cut(s)	62, 544
Hpy8I	GTNNAC	3 cut(s)	318, 413, 769
Hpy99I	CGWCG	3 cut(s)	98, 233, 319
HpyAV	CCTTC	5 cut(s)	107, 299, 319, 331, 864
HpyCH4III	ACNGT	2 cut(s)	257, 934
HpyCH4IV	ACGT	1 cut(s)	144
HpyCH4V	TGCA	6 cut(s)	56, 192, 425, 527, 687, 725
HpyF10VI	GCNNNNNNNGC	3 cut(s)	22, 53, 114
HpyF3I	CTNAG	2 cut(s)	12, 125
HpySE526I	ACGT	1 cut(s)	144
Hsp92I	GRCGYC	2 cut(s)	314, 380
Hsp92II	CATG	5 cut(s)	107, 170, 437, 547, 1059
HspAI	GCGC	1 cut(s)	154
Kzo9I	GATC	6 cut(s)	208, 284, 294, 307, 643, 1083
LguI	GCTCTTC	1 cut(s)	395
LmnI	GCTCC	6 cut(s)	10, 74, 365, 430, 590, 1034
Lsp1109I	GCAGC	3 cut(s)	129, 233, 328
LweI	GCATC	5 cut(s)	201, 381, 412, 699, 1099
MaeI	CTAG	3 cut(s)	878, 1011, 1031
MaeII	ACGT	1 cut(s)	144
MaeIII	GTNAC	2 cut(s)	474, 580
MalI	GATC	6 cut(s)	210, 286, 296, 309, 645, 1085
MboI	GATC	6 cut(s)	208, 284, 294, 307, 643, 1083
MboII	GAAGA	6 cut(s)	146, 205, 406, 412, 1110, 1118
MflI	RGATCY	2 cut(s)	284, 1083
MhlI	GDGCHC	1 cut(s)	930
MluCI	AATT	5 cut(s)	539, 669, 682, 762, 908
MlyI	GAGTC	4 cut(s)	4, 93, 263, 456
MmeI	TCCRAC	1 cut(s)	32
MseI	TTAA	3 cut(s)	519, 945, 1131
MslI	CAYNNNNRTG	1 cut(s)	849
MspA1I	CMGCKG	1 cut(s)	81
MspCI	CTTAAG	2 cut(s)	518, 944
MspI	CCGG	8 cut(s)	39, 275, 311, 351, 385, 459, 713, 914
MspR9I	CCNGG	5 cut(s)	18, 352, 385, 467, 714
MvaI	CCWGG	2 cut(s)	18, 467
MwoI	GCNNNNNNNGC	3 cut(s)	22, 53, 114
NciI	CCSGG	3 cut(s)	352, 385, 714
NdeII	GATC	6 cut(s)	208, 284, 294, 307, 643, 1083
NlaIII	CATG	5 cut(s)	107, 170, 437, 547, 1059
NlaIV	GGNNCC	8 cut(s)	6, 43, 76, 286, 592, 927, 928, 1085
NmuCI	GTSAC	1 cut(s)	580
PaeR7I	CTCGAG	1 cut(s)	161
PagI	TCATGA	1 cut(s)	543
PceI	AGGCCT	1 cut(s)	1029
PciSI	GCTCTTC	1 cut(s)	395
PcsI	WCGNNNNNNNCGW	1 cut(s)	303
PfeI	GAWTC	2 cut(s)	137, 776
PflMI	CCANNNNNTGG	1 cut(s)	836
PfoI	TCCNGGA	2 cut(s)	350, 465
PinAI	ACCGGT	1 cut(s)	38
PkrI	GCNGC	6 cut(s)	46, 119, 248, 343, 632, 951
PleI	GAGTC	4 cut(s)	4, 92, 263, 456
PpsI	GAGTC	4 cut(s)	4, 92, 263, 456
Psp6I	CCWGG	2 cut(s)	16, 465
PspGI	CCWGG	2 cut(s)	16, 465
PspN4I	GGNNCC	8 cut(s)	6, 43, 76, 286, 592, 927, 928, 1085
PspOMI	GGGCCC	1 cut(s)	926
PspPI	GGNCC	3 cut(s)	445, 926, 927
PspXI	VCTCGAGB	1 cut(s)	161
PsrI	GAACNNNNNNTAC	2 cut(s)	858, 890
PsuI	RGATCY	2 cut(s)	284, 1083
RsaI	GTAC	3 cut(s)	389, 414, 496
RsaNI	GTAC	3 cut(s)	388, 413, 495
RseI	CAYNNNNRTG	1 cut(s)	849
SalI	GTCGAC	1 cut(s)	316
SapI	GCTCTTC	1 cut(s)	395
SaqAI	TTAA	3 cut(s)	519, 945, 1131
SatI	GCNGC	6 cut(s)	45, 118, 247, 342, 631, 950
Sau3AI	GATC	6 cut(s)	208, 284, 294, 307, 643, 1083
Sau96I	GGNCC	3 cut(s)	445, 926, 927
SchI	GAGTC	4 cut(s)	4, 93, 263, 456
ScrFI	CCNGG	5 cut(s)	18, 352, 385, 467, 714
SduI	GDGCHC	1 cut(s)	930
SfaNI	GCATC	5 cut(s)	201, 381, 412, 699, 1099
SfcI	CTRYAG	1 cut(s)	253
Sfr274I	CTCGAG	1 cut(s)	161
SgrAI	CRCCGGYG	1 cut(s)	38
SinI	GGWCC	1 cut(s)	445
SlaI	CTCGAG	1 cut(s)	161
SmiMI	CAYNNNNRTG	1 cut(s)	849
SmlI	CTYRAG	3 cut(s)	161, 518, 944
SmoI	CTYRAG	3 cut(s)	161, 518, 944
Sse9I	AATT	5 cut(s)	539, 669, 682, 762, 908
SseBI	AGGCCT	1 cut(s)	1029
SsiI	CCGC	6 cut(s)	45, 81, 149, 344, 631, 949
SspI	AATATT	1 cut(s)	799
SspMI	CTAG	3 cut(s)	878, 1011, 1031
StuI	AGGCCT	1 cut(s)	1029
StyD4I	CCNGG	5 cut(s)	16, 350, 383, 465, 712
StyI	CCWWGG	1 cut(s)	1030
TaaI	ACNGT	2 cut(s)	257, 934
TaiI	ACGT	1 cut(s)	147
TaqI	TCGA	7 cut(s)	140, 162, 195, 306, 317, 392, 675
TasI	AATT	5 cut(s)	539, 669, 682, 762, 908
TauI	GCSGC	3 cut(s)	47, 633, 952
TfiI	GAWTC	2 cut(s)	137, 776
Tru1I	TTAA	3 cut(s)	519, 945, 1131
Tru9I	TTAA	3 cut(s)	519, 945, 1131
TscAI	CASTG	8 cut(s)	58, 271, 432, 541, 786, 841, 856, 939
TseFI	GTSAC	1 cut(s)	580
TseI	GCWGC	3 cut(s)	117, 246, 341
Tsp45I	GTSAC	1 cut(s)	580
TspDTI	ATGAA	5 cut(s)	211, 350, 532, 833, 1044
TspRI	CASTG	8 cut(s)	58, 271, 432, 541, 786, 841, 856, 939
Van91I	CCANNNNNTGG	1 cut(s)	836
Vha464I	CTTAAG	2 cut(s)	518, 944
VpaK11BI	GGWCC	1 cut(s)	445
XapI	RAATTY	1 cut(s)	539
XcmI	CCANNNNNNNNNTGG	1 cut(s)	164
XhoI	CTCGAG	1 cut(s)	161
XmaJI	CCTAGG	1 cut(s)	1030
XmiI	GTMKAC	1 cut(s)	317
XspI	CTAG	3 cut(s)	878, 1011, 1031

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.