FvH4_6g05260

Glutathione synthetase

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
Physical Location & Seq
Reverse (-)
2963340 .. 2968232
4893 bp
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UTR
Exon/CDS
Intron
FvH4_6g05260.t1

Sequence Viewer

Length: 1653 bp
ATGGGTGCTTCACATTCCATCCCACTCACCACTGATACCATCACTCTTCTCCACTCAAATCCCAGAACCACTTTGTTTTGTCAATCAAGACTACAAAACCCAGTGTTTAGATTAAACCCAACCAACCGAATCTTCAAGACCCAGTTGAAGACCATGTCTCAAACCTCTCAAGTTGTGCCAGTCAATGGTGGCAAAGTTGTAGTTAGGGAGACCCAGGATGAAAGTAGCTCAAGGCCAATTAATGTTGATGGGATTGATCAGGAAGTGGTTGACAAGATGGTGTATGATGCTCTTGTTTGGAGCTCTATTCATGGCCTTGTTGTTGGTGACAGGTCTGTAAAGAGGTCATCAACAGTACCTGGAGTAGGAATGGTACACGCCCCGTTCGCTTTACTTCCAATGCCGTTTCCAGAAAGTCAGTTGAAGCAAGCGTATGATTTAGCCCCCATTTTCAATGAACTTGTTGATCAAGTGAGTTTGGATGCCAAATTCCTGCAGGATTCACTGTCCAGAACGAAGAAAGCAGATCCTTTTACATCTAGACTTCTAGATATTCATGCAAAGATGCTAGAGATTAACAAGAAAGAGGAGATACGCTTGGGTTTACATCGCTCAGATTATATGCTTGATGAACAAACCAAATTACTCCTTCAAATAGAGATGAACACAATTTCATCTTCATTTGCAGGGCTCAGTGGTCTTGTCGGCAAACTTCACAGGAGCTTACTTAGTAAGTATGGAGAAATTCTCGGATTAAATTCTAAAAGGATTCCTGATAATGCTGCAGTTGGTCAGTTTTCAGCAGCTTTGGCTAAAGCTTGGACTGAATACAACAACCCCAGGGCCGCAGTTCTGTTTGTGGTTCAGGCGGAAGAGCGCAACATGTATGACCAACATTGGCTCTCTGTTACGTTGAAGGAAAAATATAATATTTCATCTAGTCGAAAAACTTTGGCTGAAATTGATGCCGAGGGGGAGCTTCTACCAGATGGAACACTTGTTGTGGGCGGCCAAATAATTGGAATAGTTTATTTCAGAGCGGGGTATACCCCAAATGATTATCCTTCAGAATCAGAGTGGAGAGCTAGGTTACTTATGGAGCAGTCATCCGCCATCAAGTGCCCATCAATATCATATCATCTAGCAGGGACGAAAAAGGTTCAACAGGAACTTGCTAAGCCTAATGTTCTCGAGAGGTTCCTTGACAGTAAAGAGGACATTGCAAAATTGCGAAAATGCTTTGCAGGATTGTGGAGTTTGGATGACTCAGATATTGTCAGAAAAGCAATAGAAATGCCAGAGCTATTTGTCATGAAGCCCCAAAGAGAAGGCGGAGGGAACAATATCTATGGCAATGACGTGAGAGAAACCCTCATTAAATTGCAGAAGGAAGGTTCAGAAGCAGATGCTGCTTACATCCTGATGCAGAGGTTATTCCCGGCTGTTTCTCCCACATTCTTGATACGAGAGGGAATTTGTTATAAAGAGGACACTATATCTGAGCTTGGGGTATATGGTGCCTATTTGAGGAACAACGAGAACGTGATTTTGAATGACCAGTGTGGCTACCTGATGCGAACCAAGGTTTCGTCATCAGATGAAGGTGGGGTTGCAGCTGGATTTGCTGTTTTAGATAGTTTATATCTAACTTGA

Protein Analysis

551

Amino Acids

61.25

Weight (kDa)

6.21

Isoelectric Point (pI)

45.58

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GSH_synth_ATP PF03917 88 - 549 2.3e-126 Eukaryotic glutathione synthase, ATP binding domain
GSH_synthase PF03199 283 - 382 5.3e-34 Eukaryotic glutathione synthase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1482
AccB1I GGYRCC 1 cut(s) 1517
AccB7I CCANNNNNTGG 1 cut(s) 185
AccBSI CCGCTC 1 cut(s) 1040
AccI GTMKAC 1 cut(s) 1046
AciI CCGC 6 cut(s) 846, 869, 1008, 1040, 1110, 1332
AclWI GGATC 1 cut(s) 521
AcoI YGGCCR 1 cut(s) 1009
AcsI RAATTY 4 cut(s) 488, 744, 757, 1473
AcuI CTGAAG 1 cut(s) 1050
AfaI GTAC 2 cut(s) 357, 375
AfiI CCNNNNNNNGG 3 cut(s) 185, 365, 1527
AflIII ACRYGT 1 cut(s) 882
AgsI TTSAA 8 cut(s) 136, 148, 424, 454, 653, 916, 1163, 1552
AjiI CACGTC 1 cut(s) 1360
AjnI CCWGG 3 cut(s) 213, 358, 839
AjuI GAANNNNNNNTTGG 2 cut(s) 116, 148
Alw21I GWGCWC 1 cut(s) 305
Alw26I GTCTC 2 cut(s) 162, 203
AlwI GGATC 1 cut(s) 521
AlwNI CAGNNNCTG 2 cut(s) 359, 1409
Ama87I CYCGRG 1 cut(s) 1190
AoxI GGCC 4 cut(s) 233, 313, 843, 1009
ApeKI GCWGC 4 cut(s) 782, 803, 1409, 1613
ApoI RAATTY 4 cut(s) 488, 744, 757, 1473
AseI ATTAAT 1 cut(s) 240
AspLEI GCGC 1 cut(s) 879
AspS9I GGNCC 1 cut(s) 843
AsuC2I CCSGG 1 cut(s) 1439
AsuHPI GGTGA 2 cut(s) 19, 338
AvaI CYCGRG 1 cut(s) 1190
BaeGI GKGCMC 1 cut(s) 1124
BanI GGYRCC 1 cut(s) 1517
BanII GRGCYC 2 cut(s) 305, 693
BbsI GAAGAC 1 cut(s) 155
Bbv12I GWGCWC 1 cut(s) 305
BbvI GCAGC 4 cut(s) 769, 815, 1396, 1625
BccI CCATC 7 cut(s) 26, 47, 242, 271, 983, 1121, 1132
BceAI ACGGC 1 cut(s) 388
BciT130I CCWGG 3 cut(s) 215, 360, 841
BclI TGATCA 2 cut(s) 256, 466
BcnI CCSGG 1 cut(s) 1439
BcoDI GTCTC 2 cut(s) 162, 203
BfaI CTAG 6 cut(s) 540, 548, 569, 939, 1086, 1142
BfmI CTRYAG 2 cut(s) 494, 783
BisI GCNGC 6 cut(s) 783, 804, 846, 1009, 1410, 1614
BlpI GCTNAGC 1 cut(s) 1176
BlsI GCNGC 6 cut(s) 784, 805, 847, 1010, 1411, 1615
Bme1390I CCNGG 4 cut(s) 215, 360, 841, 1439
BmeT110I CYCGRG 1 cut(s) 1190
BmgBI CACGTC 1 cut(s) 1360
BmgT120I GGNCC 1 cut(s) 843
BmiI GGNNCC 2 cut(s) 1199, 1519
BmrFI CCNGG 4 cut(s) 215, 360, 841, 1439
BmrI ACTGGG 2 cut(s) 95, 136
BmsI GCATC 7 cut(s) 277, 472, 555, 955, 1396, 1413, 1563
BmuI ACTGGG 2 cut(s) 95, 136
BpiI GAAGAC 1 cut(s) 155
BplI GAGNNNNNCTC 4 cut(s) 732, 764, 1356, 1388
BpmI CTGGAG 1 cut(s) 381
Bpu1102I GCTNAGC 1 cut(s) 1176
BpuEI CTTGAG 2 cut(s) 153, 214
BpuMI CCSGG 1 cut(s) 1439
BsaI GGTCTC 1 cut(s) 203
BsaJI CCNNGG 5 cut(s) 213, 839, 840, 969, 1581
Bsc4I CCNNNNNNNGG 3 cut(s) 185, 365, 1527
Bse1I ACTGG 4 cut(s) 101, 142, 179, 1558
Bse3DI GCAATG 2 cut(s) 1218, 1360
BseBI CCWGG 3 cut(s) 215, 360, 841
BseDI CCNNGG 5 cut(s) 213, 839, 840, 969, 1581
BseGI GGATG 6 cut(s) 18, 223, 487, 1106, 1267, 1416
BseLI CCNNNNNNNGG 3 cut(s) 185, 365, 1527
BseMI GCAATG 2 cut(s) 1218, 1360
BseMII CTCAG 4 cut(s) 627, 706, 1281, 1491
BseNI ACTGG 4 cut(s) 101, 142, 179, 1558
BseRI GAGGAG 1 cut(s) 602
BseSI GKGCMC 1 cut(s) 1124
BseXI GCAGC 4 cut(s) 769, 815, 1396, 1625
BshFI GGCC 4 cut(s) 235, 315, 845, 1011
BshNI GGYRCC 1 cut(s) 1517
BsiHKAI GWGCWC 1 cut(s) 305
BsiHKCI CYCGRG 1 cut(s) 1190
BsiSI CCGG 1 cut(s) 1439
BslFI GGGAC 1 cut(s) 1162
BslI CCNNNNNNNGG 3 cut(s) 185, 365, 1527
BsmAI GTCTC 2 cut(s) 162, 203
BsmFI GGGAC 1 cut(s) 1162
BsnI GGCC 4 cut(s) 235, 315, 845, 1011
Bso31I GGTCTC 1 cut(s) 203
BsoBI CYCGRG 1 cut(s) 1190
Bsp1286I GDGCHC 3 cut(s) 305, 693, 1124
Bsp143I GATC 3 cut(s) 256, 466, 526
Bsp1720I GCTNAGC 1 cut(s) 1176
BspACI CCGC 6 cut(s) 846, 869, 1008, 1040, 1110, 1332
BspANI GGCC 4 cut(s) 235, 315, 845, 1011
BspCNI CTCAG 4 cut(s) 626, 705, 1280, 1492
BspHI TCATGA 1 cut(s) 1311
BspLI GGNNCC 2 cut(s) 1199, 1519
BspMAI CTGCAG 2 cut(s) 498, 787
BspPI GGATC 1 cut(s) 521
BspQI GCTCTTC 1 cut(s) 867
BspT107I GGYRCC 1 cut(s) 1517
BspTNI GGTCTC 1 cut(s) 203
BsrBI CCGCTC 1 cut(s) 1040
BsrDI GCAATG 2 cut(s) 1218, 1360
BsrI ACTGG 4 cut(s) 101, 142, 179, 1558
BssECI CCNNGG 5 cut(s) 213, 839, 840, 969, 1581
BssMI GATC 3 cut(s) 256, 466, 526
BssNAI GTATAC 1 cut(s) 1047
BssT1I CCWWGG 1 cut(s) 1581
Bst1107I GTATAC 1 cut(s) 1047
Bst2UI CCWGG 3 cut(s) 215, 360, 841
Bst4CI ACNGT 3 cut(s) 355, 507, 1208
Bst6I CTCTTC 2 cut(s) 51, 867
BstAPI GCANNNNNTGC 1 cut(s) 1409
BstC8I GCNNGC 1 cut(s) 429
BstDEI CTNAG 6 cut(s) 613, 692, 728, 1176, 1267, 1500
BstENI CCTNNNNNAGG 2 cut(s) 363, 1525
BstF5I GGATG 6 cut(s) 18, 223, 487, 1106, 1267, 1416
BstHHI GCGC 1 cut(s) 879
BstKTI GATC 3 cut(s) 259, 469, 529
BstMAI GTCTC 2 cut(s) 162, 203
BstMBI GATC 3 cut(s) 256, 466, 526
BstMWI GCNNNNNNNGC 4 cut(s) 386, 809, 1409, 1622
BstNI CCWGG 3 cut(s) 215, 360, 841
BstNSI RCATGY 1 cut(s) 886
BstSCI CCNGG 4 cut(s) 213, 358, 839, 1437
BstSFI CTRYAG 2 cut(s) 494, 783
BstSLI GKGCMC 1 cut(s) 1124
BstV1I GCAGC 4 cut(s) 769, 815, 1396, 1625
BstV2I GAAGAC 1 cut(s) 155
BstX2I RGATCY 1 cut(s) 526
BstXI CCANNNNNNTGG 1 cut(s) 1019
BstYI RGATCY 1 cut(s) 526
BstZ17I GTATAC 1 cut(s) 1047
BsuRI GGCC 4 cut(s) 235, 315, 845, 1011
BtgZI GCGATG 1 cut(s) 593
BtrI CACGTC 1 cut(s) 1360
BtsCI GGATG 6 cut(s) 18, 223, 487, 1106, 1267, 1416
BtsIMutI CAGTG 5 cut(s) 30, 108, 503, 700, 1565
Cac8I GCNNGC 1 cut(s) 429
CaiI CAGNNNCTG 2 cut(s) 359, 1409
CciI TCATGA 1 cut(s) 1311
CfoI GCGC 1 cut(s) 879
Cfr13I GGNCC 1 cut(s) 843
Csp6I GTAC 2 cut(s) 356, 374
CviAII CATG 5 cut(s) 154, 311, 557, 883, 1312
CviQI GTAC 2 cut(s) 356, 374
DdeI CTNAG 6 cut(s) 613, 692, 728, 1176, 1267, 1500
DpnI GATC 3 cut(s) 258, 468, 528
DpnII GATC 3 cut(s) 256, 466, 526
EaeI YGGCCR 1 cut(s) 1009
Eam1104I CTCTTC 2 cut(s) 51, 867
EarI CTCTTC 2 cut(s) 51, 867
EciI GGCGGA 3 cut(s) 884, 1099, 1347
Ecl136II GAGCTC 1 cut(s) 303
Eco130I CCWWGG 1 cut(s) 1581
Eco24I GRGCYC 2 cut(s) 305, 693
Eco31I GGTCTC 1 cut(s) 203
Eco53kI GAGCTC 1 cut(s) 303
Eco57I CTGAAG 1 cut(s) 1050
Eco88I CYCGRG 1 cut(s) 1190
EcoICRI GAGCTC 1 cut(s) 303
EcoNI CCTNNNNNAGG 2 cut(s) 363, 1525
EcoRII CCWGG 3 cut(s) 213, 358, 839
EcoT14I CCWWGG 1 cut(s) 1581
EcoT38I GRGCYC 2 cut(s) 305, 693
ErhI CCWWGG 1 cut(s) 1581
FaeI CATG 5 cut(s) 157, 314, 560, 886, 1315
FaqI GGGAC 1 cut(s) 1162
FatI CATG 5 cut(s) 153, 310, 556, 882, 1311
FauI CCCGC 1 cut(s) 1033
FbaI TGATCA 2 cut(s) 256, 466
FblI GTMKAC 1 cut(s) 1046
Fnu4HI GCNGC 6 cut(s) 783, 804, 846, 1009, 1410, 1614
FokI GGATG 6 cut(s) 5, 230, 494, 1093, 1274, 1403
FriOI GRGCYC 2 cut(s) 305, 693
Fsp4HI GCNGC 6 cut(s) 783, 804, 846, 1009, 1410, 1614
FspBI CTAG 6 cut(s) 540, 548, 569, 939, 1086, 1142
GlaI GCGC 1 cut(s) 878
GluI GCNGC 6 cut(s) 783, 804, 846, 1009, 1410, 1614
GsuI CTGGAG 1 cut(s) 381
HaeIII GGCC 4 cut(s) 235, 315, 845, 1011
HapII CCGG 1 cut(s) 1439
HhaI GCGC 1 cut(s) 879
Hin1II CATG 5 cut(s) 157, 314, 560, 886, 1315
Hin6I GCGC 1 cut(s) 877
HinP1I GCGC 1 cut(s) 877
HincII GTYRAC 1 cut(s) 271
HindII GTYRAC 1 cut(s) 271
HindIII AAGCTT 1 cut(s) 816
HinfI GANTC 5 cut(s) 129, 500, 769, 1070, 1265
HpaII CCGG 1 cut(s) 1439
HphI GGTGA 2 cut(s) 19, 338
Hpy166II GTNNAC 4 cut(s) 271, 376, 605, 1047
Hpy8I GTNNAC 4 cut(s) 271, 376, 605, 1047
HpyAV CCTTC 7 cut(s) 659, 910, 1074, 1322, 1381, 1385, 1595
HpyCH4III ACNGT 3 cut(s) 355, 507, 1208
HpyCH4IV ACGT 3 cut(s) 911, 1359, 1542
HpyCH4V TGCA 9 cut(s) 496, 560, 686, 785, 1223, 1244, 1384, 1426, 1613
HpyF10VI GCNNNNNNNGC 4 cut(s) 386, 809, 1409, 1622
HpyF3I CTNAG 6 cut(s) 613, 692, 728, 1176, 1267, 1500
HpySE526I ACGT 3 cut(s) 911, 1359, 1542
Hsp92II CATG 5 cut(s) 157, 314, 560, 886, 1315
HspAI GCGC 1 cut(s) 877
Ksp22I TGATCA 2 cut(s) 256, 466
Kzo9I GATC 3 cut(s) 256, 466, 526
LguI GCTCTTC 1 cut(s) 867
LmnI GCTCC 4 cut(s) 300, 720, 976, 1099
Lsp1109I GCAGC 4 cut(s) 769, 815, 1396, 1625
LweI GCATC 7 cut(s) 277, 472, 555, 955, 1396, 1413, 1563
MaeI CTAG 6 cut(s) 540, 548, 569, 939, 1086, 1142
MaeII ACGT 3 cut(s) 911, 1359, 1542
MaeIII GTNAC 3 cut(s) 326, 907, 1089
MalI GATC 3 cut(s) 258, 468, 528
MbiI CCGCTC 1 cut(s) 1040
MboI GATC 3 cut(s) 256, 466, 526
MboII GAAGA 6 cut(s) 38, 124, 160, 529, 669, 884
MflI RGATCY 1 cut(s) 526
MhlI GDGCHC 3 cut(s) 305, 693, 1124
MlyI GAGTC 1 cut(s) 1259
MseI TTAA 5 cut(s) 113, 240, 576, 755, 1377
MslI CAYNNNNRTG 1 cut(s) 1421
MspA1I CMGCKG 1 cut(s) 1616
MspI CCGG 1 cut(s) 1439
MspR9I CCNGG 4 cut(s) 215, 360, 841, 1439
MvaI CCWGG 3 cut(s) 215, 360, 841
MwoI GCNNNNNNNGC 4 cut(s) 386, 809, 1409, 1622
NciI CCSGG 1 cut(s) 1439
NdeII GATC 3 cut(s) 256, 466, 526
NlaIII CATG 5 cut(s) 157, 314, 560, 886, 1315
NlaIV GGNNCC 2 cut(s) 1199, 1519
NmeAIII GCCGAG 1 cut(s) 994
NmuCI GTSAC 1 cut(s) 326
NspI RCATGY 1 cut(s) 886
PaeR7I CTCGAG 1 cut(s) 1190
PagI TCATGA 1 cut(s) 1311
PasI CCCWGGG 1 cut(s) 840
PciI ACATGT 1 cut(s) 882
PciSI GCTCTTC 1 cut(s) 867
PfeI GAWTC 4 cut(s) 129, 500, 769, 1070
PflFI GACNNNGTC 1 cut(s) 154
PflMI CCANNNNNTGG 1 cut(s) 185
PkrI GCNGC 6 cut(s) 784, 805, 847, 1010, 1411, 1615
PleI GAGTC 1 cut(s) 1259
PpsI GAGTC 1 cut(s) 1259
PscI ACATGT 1 cut(s) 882
PshBI ATTAAT 1 cut(s) 240
PsiI TTATAA 1 cut(s) 1482
Psp124BI GAGCTC 1 cut(s) 305
Psp6I CCWGG 3 cut(s) 213, 358, 839
PspGI CCWGG 3 cut(s) 213, 358, 839
PspN4I GGNNCC 2 cut(s) 1199, 1519
PspPI GGNCC 1 cut(s) 843
PstI CTGCAG 2 cut(s) 498, 787
PstNI CAGNNNCTG 2 cut(s) 359, 1409
PsuI RGATCY 1 cut(s) 526
PsyI GACNNNGTC 1 cut(s) 154
PvuII CAGCTG 1 cut(s) 1616
RsaI GTAC 2 cut(s) 357, 375
RsaNI GTAC 2 cut(s) 356, 374
RseI CAYNNNNRTG 1 cut(s) 1421
SacI GAGCTC 1 cut(s) 305
SapI GCTCTTC 1 cut(s) 867
SaqAI TTAA 5 cut(s) 113, 240, 576, 755, 1377
SatI GCNGC 6 cut(s) 783, 804, 846, 1009, 1410, 1614
Sau3AI GATC 3 cut(s) 256, 466, 526
Sau96I GGNCC 1 cut(s) 843
SbfI CCTGCAGG 1 cut(s) 498
SchI GAGTC 1 cut(s) 1259
ScrFI CCNGG 4 cut(s) 215, 360, 841, 1439
SdaI CCTGCAGG 1 cut(s) 498
SduI GDGCHC 3 cut(s) 305, 693, 1124
SfaNI GCATC 7 cut(s) 277, 472, 555, 955, 1396, 1413, 1563
SfcI CTRYAG 2 cut(s) 494, 783
Sfr274I CTCGAG 1 cut(s) 1190
SlaI CTCGAG 1 cut(s) 1190
SmiMI CAYNNNNRTG 1 cut(s) 1421
SmlI CTYRAG 3 cut(s) 168, 229, 1190
SmoI CTYRAG 3 cut(s) 168, 229, 1190
Sse8387I CCTGCAGG 1 cut(s) 498
SsiI CCGC 6 cut(s) 846, 869, 1008, 1040, 1110, 1332
SspI AATATT 1 cut(s) 931
SspMI CTAG 6 cut(s) 540, 548, 569, 939, 1086, 1142
SstI GAGCTC 1 cut(s) 305
StyD4I CCNGG 4 cut(s) 213, 358, 839, 1437
StyI CCWWGG 1 cut(s) 1581
TaaI ACNGT 3 cut(s) 355, 507, 1208
TaiI ACGT 3 cut(s) 914, 1362, 1545
TaqI TCGA 2 cut(s) 943, 1191
TauI GCSGC 2 cut(s) 848, 1011
TfiI GAWTC 4 cut(s) 129, 500, 769, 1070
Tru1I TTAA 5 cut(s) 113, 240, 576, 755, 1377
Tru9I TTAA 5 cut(s) 113, 240, 576, 755, 1377
TscAI CASTG 5 cut(s) 37, 108, 510, 700, 1565
TseFI GTSAC 1 cut(s) 326
TseI GCWGC 4 cut(s) 782, 803, 1409, 1613
Tsp45I GTSAC 1 cut(s) 326
TspRI CASTG 5 cut(s) 37, 108, 510, 700, 1565
Tth111I GACNNNGTC 1 cut(s) 154
Van91I CCANNNNNTGG 1 cut(s) 185
VspI ATTAAT 1 cut(s) 240
XagI CCTNNNNNAGG 2 cut(s) 363, 1525
XapI RAATTY 4 cut(s) 488, 744, 757, 1473
XbaI TCTAGA 2 cut(s) 539, 547
XceI RCATGY 1 cut(s) 886
XhoI CTCGAG 1 cut(s) 1190
XmiI GTMKAC 1 cut(s) 1046
XspI CTAG 6 cut(s) 540, 548, 569, 939, 1086, 1142
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.