RchiOBHm_Chr3g0453991

Glutathione synthetase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
3
Physical Location & Seq
Reverse (-)
4233966 .. 4238729
4764 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ42102

Sequence Viewer

Length: 1785 bp
ATGTATAAAAGCCACTTTAAAGGAGTGATGGGTGCTTCACATTCCATCCCTCTCACCACTGATGCCATCACCCTTCTTCACTCAAATCCCAGAACAACCTTGTTTTCTCAGTCAACACAGTCGAGATTACAAAACCCAGTATTCAAATCAAACCCCACCAACCAAATCTTCAAGGCCCAGTTGAAGACCATGTCTCAACCCTCTCAAGTTGTGCCTGTCAATGGTGGCAAAGTTGTAGTTAGGGAGACCCAAGATGAAAGTAGCACATGGCCAATTAATGTTGATGGGATTGATCAGGAAGTGGTTGACAAGATGGTATATGATGCTCTTGTTTGGAGCTCAATTCATGGCCTTGTTGTTGGTGACAGGTCTGTTCAGAGGTCATCAACAGTACCTGGAGTAGGATTGGTACACGCCCCGTTCGCTTTACTTCCGATGCCGTTTCCAGCAACTCAGTTGAATCAAGCGAATGAGTTAGCCCCCATATTCAATGAACTTGTTGATCGAGTGAGTTTGGATGCCAAATTCCTGCAGGATTCATTGTCCAGAACGAAGAAAGCAGATCCTTTTACATCTAGACTTCTAGATATTCATGCCAAGATGCTAGAGATTAACAAGAAAGAGGAGATACGCTTGGGTTTACATCGGTCAGATTATATGCTTGATGAACAAACTAAATTACTCCTTCAAATAGAGATGAACACAATTTCATCTTCATTTGCAGGCCTCAGTGGTCTTGTCGGCAAACTTCACAGGAGCTTACTTAGTAACTATGGAGAATTTCTTGGATTAGATTCCAAAAGGATTCCTGATAATGCTGCAGTCAGTCAATTTTCAATGGCTTTGGCTAGAGCTTGGACTGAATACAACAACCCCAGGGCGGTAGTTCTGTTTGTGGTTCAGGCTGAAGAACGCAACATGTACGACCAGCATTGGCTCTCTACTACATTGAAAGAAAAATATCCTTTATTATTCTCAATTTACTGCATAAAGAAGTTTGTCTGTTATGGAACTCTTATTAGTATATGTCCATGTGAAACTGAAGATAATAAATATAAAAGCTTTTGTATTGGTTTCATTGAAACTTCAAAAATTGATGCTGAGGCGGAGCTTCTACCAGATGGAACACTTGTTATGGGTGGCCAAGTAATTGGAATAGTTTATTTCAGAGCTGGGTATACCCCAAATGATTATCCTTCTGAAGCAGAGTGGAGAGCTAGGTTACTTATGGAGCAGTCGTCCGCCATCAAGTGCCCATCAATATCTTATCATTTAGTAGGGACGAAAAAGGTTCAACAGGAACTTGCTAAGCCTAATGTTCTTGAGAGGTTCCTTGACGATAAAGAGGACATTGCAAAATTACGGAAATGCTTTGCAGGATTGTGGAGTTTGGATGACTCAGATATTGTCAAAAAAGCAATAGAAAAGCCAGAGTTATTTGTCATGAAGCCCCAAAGAGAAGGCGGAGGGAACAATATCTATGGCAATGATGTTAGGGAGACCCTCATTAAATTGCAGAAGGAAGGGTCAGAAGCAGAGGCTGCTTATATCCTGATGCAGAGGTTATTCCCTGCTGTTTCTACCACATTCTTGATGCGAGAGGGCATTTGTTATAAAGACGATACTATATCTGAGCTTGGGGTATATGGTGCCTACTTGAGGAACAACGAGAAAGTGATTTTGAATGACCAGTGTGGCTACCTGATGCGAACCAAGGTTTCATCATCGGATGAAGGTGGAGTTGCCGCTGGATTTGCGGTCTTAGATAGTTTATATTTAACTTGA

Protein Analysis

594

Amino Acids

66.43

Weight (kDa)

6.13

Isoelectric Point (pI)

38.09

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GSH_synth_ATP PF03917 100 - 593 1.6e-127 Eukaryotic glutathione synthase, ATP binding domain
GSH_synthase PF03199 294 - 426 1.5e-26 Eukaryotic glutathione synthase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1614
AccB1I GGYRCC 1 cut(s) 1649
AccI GTMKAC 1 cut(s) 1178
AciI CCGC 6 cut(s) 881, 1106, 1242, 1464, 1746, 1757
AclWI GGATC 1 cut(s) 557
AcoI YGGCCR 2 cut(s) 269, 1141
AcsI RAATTY 2 cut(s) 524, 779
AcuI CTGAAG 3 cut(s) 927, 1062, 1221
AfaI GTAC 3 cut(s) 393, 411, 923
AfiI CCNNNNNNNGG 4 cut(s) 221, 401, 880, 1659
AflIII ACRYGT 1 cut(s) 918
AjnI CCWGG 2 cut(s) 394, 875
AjuI GAANNNNNNNTTGG 2 cut(s) 152, 184
AluBI AGCT 8 cut(s) 339, 759, 854, 1062, 1111, 1172, 1217, 1636
AluI AGCT 8 cut(s) 339, 759, 854, 1062, 1111, 1172, 1217, 1636
Alw21I GWGCWC 1 cut(s) 341
Alw26I GTCTC 3 cut(s) 198, 239, 1493
AlwI GGATC 1 cut(s) 557
AlwNI CAGNNNCTG 2 cut(s) 395, 1541
AoxI GGCC 5 cut(s) 174, 269, 349, 724, 1141
ApeKI GCWGC 2 cut(s) 818, 1541
ApoI RAATTY 2 cut(s) 524, 779
AseI ATTAAT 1 cut(s) 276
AspS9I GGNCC 1 cut(s) 175
AsuHPI GGTGA 3 cut(s) 46, 61, 374
BaeGI GKGCMC 1 cut(s) 1256
BalI TGGCCA 2 cut(s) 271, 1143
BanI GGYRCC 1 cut(s) 1649
BanII GRGCYC 1 cut(s) 341
BbsI GAAGAC 1 cut(s) 191
Bbv12I GWGCWC 1 cut(s) 341
BbvCI CCTCAGC 1 cut(s) 1101
BbvI GCAGC 2 cut(s) 805, 1528
BccI CCATC 8 cut(s) 22, 53, 74, 278, 307, 1115, 1253, 1264
BceAI ACGGC 1 cut(s) 424
BciT130I CCWGG 2 cut(s) 396, 877
BclI TGATCA 1 cut(s) 292
BcoDI GTCTC 3 cut(s) 198, 239, 1493
BfaI CTAG 5 cut(s) 576, 584, 605, 849, 1218
BfmI CTRYAG 2 cut(s) 530, 819
BisI GCNGC 3 cut(s) 819, 1542, 1746
BlpI GCTNAGC 1 cut(s) 1308
BlsI GCNGC 3 cut(s) 820, 1543, 1747
Bme1390I CCNGG 2 cut(s) 396, 877
BmgT120I GGNCC 1 cut(s) 175
BmiI GGNNCC 2 cut(s) 1331, 1651
BmrFI CCNGG 2 cut(s) 396, 877
BmrI ACTGGG 2 cut(s) 131, 172
BmsI GCATC 9 cut(s) 52, 313, 426, 508, 591, 1087, 1545, 1584, 1695
BmuI ACTGGG 2 cut(s) 131, 172
BpiI GAAGAC 1 cut(s) 191
BpmI CTGGAG 1 cut(s) 417
Bpu10I CCTNAGC 1 cut(s) 1101
Bpu1102I GCTNAGC 1 cut(s) 1308
BpuEI CTTGAG 3 cut(s) 189, 1343, 1678
BsaI GGTCTC 2 cut(s) 239, 1493
BsaJI CCNNGG 3 cut(s) 875, 876, 1713
BsaXI ACNNNNNCTCC 2 cut(s) 1223, 1253
Bsc4I CCNNNNNNNGG 4 cut(s) 221, 401, 880, 1659
Bse1I ACTGG 3 cut(s) 137, 178, 1690
Bse3DI GCAATG 2 cut(s) 1350, 1492
BseBI CCWGG 2 cut(s) 396, 877
BseDI CCNNGG 3 cut(s) 875, 876, 1713
BseGI GGATG 4 cut(s) 45, 523, 1399, 1735
BseLI CCNNNNNNNGG 4 cut(s) 221, 401, 880, 1659
BseMI GCAATG 2 cut(s) 1350, 1492
BseMII CTCAG 6 cut(s) 122, 467, 742, 1092, 1413, 1623
BseNI ACTGG 3 cut(s) 137, 178, 1690
BseRI GAGGAG 1 cut(s) 638
BseSI GKGCMC 1 cut(s) 1256
BseXI GCAGC 2 cut(s) 805, 1528
BseYI CCCAGC 1 cut(s) 1172
BshFI GGCC 5 cut(s) 176, 271, 351, 726, 1143
BshNI GGYRCC 1 cut(s) 1649
BsiHKAI GWGCWC 1 cut(s) 341
BslFI GGGAC 1 cut(s) 1294
BslI CCNNNNNNNGG 4 cut(s) 221, 401, 880, 1659
BsmAI GTCTC 3 cut(s) 198, 239, 1493
BsmFI GGGAC 1 cut(s) 1294
BsnI GGCC 5 cut(s) 176, 271, 351, 726, 1143
Bso31I GGTCTC 2 cut(s) 239, 1493
Bsp1286I GDGCHC 2 cut(s) 341, 1256
Bsp143I GATC 3 cut(s) 292, 502, 562
Bsp1720I GCTNAGC 1 cut(s) 1308
BspACI CCGC 6 cut(s) 881, 1106, 1242, 1464, 1746, 1757
BspANI GGCC 5 cut(s) 176, 271, 351, 726, 1143
BspCNI CTCAG 6 cut(s) 121, 466, 741, 1093, 1412, 1624
BspHI TCATGA 1 cut(s) 1443
BspLI GGNNCC 2 cut(s) 1331, 1651
BspMAI CTGCAG 2 cut(s) 534, 823
BspPI GGATC 1 cut(s) 557
BspT107I GGYRCC 1 cut(s) 1649
BspTNI GGTCTC 2 cut(s) 239, 1493
BsrDI GCAATG 2 cut(s) 1350, 1492
BsrI ACTGG 3 cut(s) 137, 178, 1690
BssECI CCNNGG 3 cut(s) 875, 876, 1713
BssMI GATC 3 cut(s) 292, 502, 562
BssNAI GTATAC 1 cut(s) 1179
BssT1I CCWWGG 1 cut(s) 1713
Bst1107I GTATAC 1 cut(s) 1179
Bst2UI CCWGG 2 cut(s) 396, 877
Bst4CI ACNGT 2 cut(s) 120, 391
BstAPI GCANNNNNTGC 1 cut(s) 1541
BstC8I GCNNGC 1 cut(s) 724
BstDEI CTNAG 9 cut(s) 108, 453, 728, 764, 1101, 1308, 1399, 1632, 1762
BstENI CCTNNNNNAGG 2 cut(s) 399, 1657
BstF5I GGATG 4 cut(s) 45, 523, 1399, 1735
BstKTI GATC 3 cut(s) 295, 505, 565
BstMAI GTCTC 3 cut(s) 198, 239, 1493
BstMBI GATC 3 cut(s) 292, 502, 562
BstMWI GCNNNNNNNGC 3 cut(s) 422, 1541, 1754
BstNI CCWGG 2 cut(s) 396, 877
BstNSI RCATGY 1 cut(s) 922
BstSCI CCNGG 2 cut(s) 394, 875
BstSFI CTRYAG 2 cut(s) 530, 819
BstSLI GKGCMC 1 cut(s) 1256
BstV1I GCAGC 2 cut(s) 805, 1528
BstV2I GAAGAC 1 cut(s) 191
BstX2I RGATCY 1 cut(s) 562
BstXI CCANNNNNNTGG 1 cut(s) 1151
BstYI RGATCY 1 cut(s) 562
BstZ17I GTATAC 1 cut(s) 1179
BsuRI GGCC 5 cut(s) 176, 271, 351, 726, 1143
BtsCI GGATG 4 cut(s) 45, 523, 1399, 1735
BtsIMutI CAGTG 3 cut(s) 57, 736, 1697
Cac8I GCNNGC 1 cut(s) 724
CaiI CAGNNNCTG 2 cut(s) 395, 1541
CciI TCATGA 1 cut(s) 1443
Cfr13I GGNCC 1 cut(s) 175
Csp6I GTAC 3 cut(s) 392, 410, 922
CviAII CATG 7 cut(s) 190, 267, 347, 593, 919, 1032, 1444
CviQI GTAC 3 cut(s) 392, 410, 922
DdeI CTNAG 9 cut(s) 108, 453, 728, 764, 1101, 1308, 1399, 1632, 1762
DpnI GATC 3 cut(s) 294, 504, 564
DpnII GATC 3 cut(s) 292, 502, 562
DraI TTTAAA 1 cut(s) 19
EaeI YGGCCR 2 cut(s) 269, 1141
EciI GGCGGA 3 cut(s) 1121, 1231, 1479
Ecl136II GAGCTC 1 cut(s) 339
Eco130I CCWWGG 1 cut(s) 1713
Eco147I AGGCCT 1 cut(s) 726
Eco24I GRGCYC 1 cut(s) 341
Eco31I GGTCTC 2 cut(s) 239, 1493
Eco53kI GAGCTC 1 cut(s) 339
Eco57I CTGAAG 3 cut(s) 927, 1062, 1221
EcoICRI GAGCTC 1 cut(s) 339
EcoNI CCTNNNNNAGG 2 cut(s) 399, 1657
EcoRII CCWGG 2 cut(s) 394, 875
EcoT14I CCWWGG 1 cut(s) 1713
EcoT38I GRGCYC 1 cut(s) 341
ErhI CCWWGG 1 cut(s) 1713
FaeI CATG 7 cut(s) 193, 270, 350, 596, 922, 1035, 1447
FaqI GGGAC 1 cut(s) 1294
FatI CATG 7 cut(s) 189, 266, 346, 592, 918, 1031, 1443
FbaI TGATCA 1 cut(s) 292
FblI GTMKAC 1 cut(s) 1178
Fnu4HI GCNGC 3 cut(s) 819, 1542, 1746
FokI GGATG 4 cut(s) 32, 530, 1406, 1742
FriOI GRGCYC 1 cut(s) 341
Fsp4HI GCNGC 3 cut(s) 819, 1542, 1746
FspBI CTAG 5 cut(s) 576, 584, 605, 849, 1218
GluI GCNGC 3 cut(s) 819, 1542, 1746
GsaI CCCAGC 1 cut(s) 1176
GsuI CTGGAG 1 cut(s) 417
HaeIII GGCC 5 cut(s) 176, 271, 351, 726, 1143
Hin1II CATG 7 cut(s) 193, 270, 350, 596, 922, 1035, 1447
HincII GTYRAC 2 cut(s) 114, 307
HindII GTYRAC 2 cut(s) 114, 307
HindIII AAGCTT 1 cut(s) 1060
HinfI GANTC 5 cut(s) 460, 536, 794, 805, 1397
HphI GGTGA 3 cut(s) 46, 61, 374
Hpy166II GTNNAC 5 cut(s) 114, 307, 412, 641, 1179
Hpy188I TCNGA 9 cut(s) 378, 435, 652, 1169, 1201, 1402, 1531, 1633, 1729
Hpy8I GTNNAC 5 cut(s) 114, 307, 412, 641, 1179
HpyAV CCTTC 7 cut(s) 83, 695, 1206, 1454, 1513, 1517, 1727
HpyCH4III ACNGT 2 cut(s) 120, 391
HpyCH4V TGCA 8 cut(s) 532, 722, 821, 987, 1355, 1376, 1516, 1558
HpyF10VI GCNNNNNNNGC 3 cut(s) 422, 1541, 1754
HpyF3I CTNAG 9 cut(s) 108, 453, 728, 764, 1101, 1308, 1399, 1632, 1762
Hsp92II CATG 7 cut(s) 193, 270, 350, 596, 922, 1035, 1447
Ksp22I TGATCA 1 cut(s) 292
Kzo9I GATC 3 cut(s) 292, 502, 562
LmnI GCTCC 4 cut(s) 336, 756, 1108, 1231
Lsp1109I GCAGC 2 cut(s) 805, 1528
LweI GCATC 9 cut(s) 52, 313, 426, 508, 591, 1087, 1545, 1584, 1695
MaeI CTAG 5 cut(s) 576, 584, 605, 849, 1218
MaeIII GTNAC 3 cut(s) 362, 767, 1221
MalI GATC 3 cut(s) 294, 504, 564
MboI GATC 3 cut(s) 292, 502, 562
MboII GAAGA 7 cut(s) 68, 160, 196, 565, 705, 920, 1055
MflI RGATCY 1 cut(s) 562
MhlI GDGCHC 2 cut(s) 341, 1256
MlsI TGGCCA 2 cut(s) 271, 1143
MluNI TGGCCA 2 cut(s) 271, 1143
MlyI GAGTC 1 cut(s) 1391
Mox20I TGGCCA 2 cut(s) 271, 1143
MscI TGGCCA 2 cut(s) 271, 1143
MseI TTAA 5 cut(s) 18, 276, 612, 1509, 1778
Msp20I TGGCCA 2 cut(s) 271, 1143
MspA1I CMGCKG 1 cut(s) 1748
MspR9I CCNGG 2 cut(s) 396, 877
MvaI CCWGG 2 cut(s) 396, 877
MwoI GCNNNNNNNGC 3 cut(s) 422, 1541, 1754
NdeII GATC 3 cut(s) 292, 502, 562
NlaIII CATG 7 cut(s) 193, 270, 350, 596, 922, 1035, 1447
NlaIV GGNNCC 2 cut(s) 1331, 1651
NmuCI GTSAC 1 cut(s) 362
NspI RCATGY 1 cut(s) 922
PagI TCATGA 1 cut(s) 1443
PasI CCCWGGG 1 cut(s) 876
PceI AGGCCT 1 cut(s) 726
PciI ACATGT 1 cut(s) 918
PfeI GAWTC 4 cut(s) 460, 536, 794, 805
PflFI GACNNNGTC 1 cut(s) 190
PkrI GCNGC 3 cut(s) 820, 1543, 1747
PleI GAGTC 1 cut(s) 1391
PpsI GAGTC 1 cut(s) 1391
PscI ACATGT 1 cut(s) 918
PshBI ATTAAT 1 cut(s) 276
PsiI TTATAA 1 cut(s) 1614
Psp124BI GAGCTC 1 cut(s) 341
Psp6I CCWGG 2 cut(s) 394, 875
PspFI CCCAGC 1 cut(s) 1172
PspGI CCWGG 2 cut(s) 394, 875
PspN4I GGNNCC 2 cut(s) 1331, 1651
PspPI GGNCC 1 cut(s) 175
PstI CTGCAG 2 cut(s) 534, 823
PstNI CAGNNNCTG 2 cut(s) 395, 1541
PsuI RGATCY 1 cut(s) 562
PsyI GACNNNGTC 1 cut(s) 190
RsaI GTAC 3 cut(s) 393, 411, 923
RsaNI GTAC 3 cut(s) 392, 410, 922
SacI GAGCTC 1 cut(s) 341
SaqAI TTAA 5 cut(s) 18, 276, 612, 1509, 1778
SatI GCNGC 3 cut(s) 819, 1542, 1746
Sau3AI GATC 3 cut(s) 292, 502, 562
Sau96I GGNCC 1 cut(s) 175
SbfI CCTGCAGG 1 cut(s) 534
SchI GAGTC 1 cut(s) 1391
ScrFI CCNGG 2 cut(s) 396, 877
SdaI CCTGCAGG 1 cut(s) 534
SduI GDGCHC 2 cut(s) 341, 1256
SfaNI GCATC 9 cut(s) 52, 313, 426, 508, 591, 1087, 1545, 1584, 1695
SfcI CTRYAG 2 cut(s) 530, 819
SmlI CTYRAG 3 cut(s) 204, 1322, 1657
SmoI CTYRAG 3 cut(s) 204, 1322, 1657
Sse8387I CCTGCAGG 1 cut(s) 534
SseBI AGGCCT 1 cut(s) 726
SsiI CCGC 6 cut(s) 881, 1106, 1242, 1464, 1746, 1757
SspMI CTAG 5 cut(s) 576, 584, 605, 849, 1218
SstI GAGCTC 1 cut(s) 341
StuI AGGCCT 1 cut(s) 726
StyD4I CCNGG 2 cut(s) 394, 875
StyI CCWWGG 1 cut(s) 1713
TaaI ACNGT 2 cut(s) 120, 391
TaqI TCGA 2 cut(s) 122, 505
TaqII GACCGA 1 cut(s) 636
TauI GCSGC 1 cut(s) 1748
TfiI GAWTC 4 cut(s) 460, 536, 794, 805
Tru1I TTAA 5 cut(s) 18, 276, 612, 1509, 1778
Tru9I TTAA 5 cut(s) 18, 276, 612, 1509, 1778
TscAI CASTG 3 cut(s) 64, 736, 1697
TseFI GTSAC 1 cut(s) 362
TseI GCWGC 2 cut(s) 818, 1541
Tsp45I GTSAC 1 cut(s) 362
TspGWI ACGGA 1 cut(s) 1378
TspRI CASTG 3 cut(s) 64, 736, 1697
Tth111I GACNNNGTC 1 cut(s) 190
VspI ATTAAT 1 cut(s) 276
XagI CCTNNNNNAGG 2 cut(s) 399, 1657
XapI RAATTY 2 cut(s) 524, 779
XbaI TCTAGA 2 cut(s) 575, 583
XceI RCATGY 1 cut(s) 922
XmiI GTMKAC 1 cut(s) 1178
XspI CTAG 5 cut(s) 576, 584, 605, 849, 1218
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.