Rw3G004210

Glutathione synthetase

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr3
Physical Location & Seq
Reverse (-)
3690683 .. 3695163
4481 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw3G004210.1

Sequence Viewer

Length: 1590 bp
ATGGGTGCTTCACATTCCATCCCTCTCACCACTGATACCATCACCCTTCTTCACTCAAATCCCAGAACAACCTTGTTTTCTCAGTCAACACAGTCGAGATTACAAAACCCAGTATTCAAATCAAACCCCACCAACCAAATCTTCAAGGCCCAGTTGAAGACCATGTCTCAACCCTCTCAAGTTGTGCCTGTCAATGGTGGCAAAGTTGTAGTTAGGGAGACCCAAGATGAAAGTAGCACATGGCCAATTAATGTTGATGGGATTGATCAGGAAGTGGTTGACAAGATGGTATATGATGCTCTTGTTTGGAGCTCAATTCATGGCCTTGTTGTTGGTGACAGGTCTGTTCAGAGGTCATCAACAGTACCTGGAGTAGGATTGGTACACGCCCCGTTCGCTTTACTTCCGATGCCGTTTCCAGCAACTCAGTTGAATCAAGCGAATGAGTTAGCCCCCATATTCAATGAACTTGTTGATCGAGTGAGTTTGGATGCGGAATTCCTGCAGGATTCATTGTCCAGAACGAAGAAAGCAGATCCTTTTACATCTAGACTTCTAGATATTCATGCCAAGATGCTAGAGATTAACAAGAAAGAGGAGATACGCTTGGGTTTACATCGGTCAGATTATATGCTTGATGAACAAACTAAATTACTCCTTCAAATAGAGATGAACACAATTTCATCTTCATTTGCAGGCCTCAGTGGTCTTGTCGGCAAACTTCACAGGAGCTTACTTAGTAACTATGGAGAATTTCTTGGATTAGATTCCAAAAGGATTCCTGATAATGCTGCAGTCAGTCAGTTTTCAATGGCTTTGGCTAGAGCTTGGACTGAATACAACAACCCCAGGGCGGTAGTTCTGTTTGTGGTTCAGGCTGAAGAACGCAACATGTACGACCAGCATTGGCTCTCTACTACATTGAAAGAAAAATATCCTTTCGGTGGCCAAGTAATTGGAATAGTTTATTTCAGAGCTGGGTATACACCAAATGATTATCCTTCTGAAGCAGAGTGGAGAGCTAGGTTACTTATAGAGCAGTCGTCCGCCATCAAGTGCCCATCAATATCTTATCATCTAGTAGGGACGAAAAAGGTTCAACAGGAACTTGCTAAGCCTAATGTTCTTGAGAGGTTCCTTGACGATAAAGAGGACATTGCAAAATTACGGAAATGCTTTGCAGGATTGTGGAGTTTGGATGACTCAGATATTGTCAAAAAAGCAATAGAAAAGCCAGAGTTATTTGTCATGAAGCCCCAAAGAGAAGGCGGAGGGAACAATATCTATGGCAATGACGTTAGGGAGACCCTCATTAAATTGCAGAAGGAAGGGTCAGAAGCAGAGGCTGCTTATATCCTGATGCAGAGGTTATTCCCTGCTGTTTCTACCACATTCTTGATGCGAGAGGGCATTTGTTATAAAGACGATACTATATCTGAGCTTGGGGTCTATGGTGCCTACTTGAGGAACAACGAGAAAGTGATTTTGAATGACCAGTGTGGCTACCTGATGCGAACCAAGGTTTCATCATCGGATGAAGGTGGAGTTGCAGCTGGATTTGCGGTCTTAGATAGTTTATATTTAACTTGA

Protein Analysis

529

Amino Acids

59.11

Weight (kDa)

5.94

Isoelectric Point (pI)

41.0

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GSH_synth_ATP PF03917 91 - 528 6e-128 Eukaryotic glutathione synthase, ATP binding domain
GSH_synthase PF03199 317 - 361 2.6e-18 Eukaryotic glutathione synthase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1419
AccB1I GGYRCC 1 cut(s) 1454
AccI GTMKAC 1 cut(s) 983
AciI CCGC 5 cut(s) 494, 854, 1047, 1269, 1562
AclWI GGATC 1 cut(s) 530
AcoI YGGCCR 2 cut(s) 242, 946
AcsI RAATTY 2 cut(s) 497, 752
AcuI CTGAAG 2 cut(s) 900, 1026
AfaI GTAC 3 cut(s) 366, 384, 896
AfiI CCNNNNNNNGG 5 cut(s) 194, 374, 853, 944, 1464
AflIII ACRYGT 1 cut(s) 891
AjnI CCWGG 2 cut(s) 367, 848
AjuI GAANNNNNNNTTGG 2 cut(s) 125, 157
AluBI AGCT 7 cut(s) 312, 732, 827, 977, 1022, 1441, 1553
AluI AGCT 7 cut(s) 312, 732, 827, 977, 1022, 1441, 1553
Alw21I GWGCWC 1 cut(s) 314
Alw26I GTCTC 3 cut(s) 171, 212, 1298
AlwI GGATC 1 cut(s) 530
AlwNI CAGNNNCTG 2 cut(s) 368, 1346
AoxI GGCC 5 cut(s) 147, 242, 322, 697, 946
ApeKI GCWGC 3 cut(s) 791, 1346, 1550
ApoI RAATTY 2 cut(s) 497, 752
AseI ATTAAT 1 cut(s) 249
AspS9I GGNCC 1 cut(s) 148
AsuHPI GGTGA 3 cut(s) 19, 34, 347
BaeGI GKGCMC 1 cut(s) 1061
BalI TGGCCA 2 cut(s) 244, 948
BanI GGYRCC 1 cut(s) 1454
BanII GRGCYC 1 cut(s) 314
BbsI GAAGAC 1 cut(s) 164
Bbv12I GWGCWC 1 cut(s) 314
BbvI GCAGC 3 cut(s) 778, 1333, 1562
BccI CCATC 6 cut(s) 26, 47, 251, 280, 1058, 1069
BceAI ACGGC 1 cut(s) 397
BciT130I CCWGG 2 cut(s) 369, 850
BclI TGATCA 1 cut(s) 265
BcoDI GTCTC 3 cut(s) 171, 212, 1298
BfaI CTAG 6 cut(s) 549, 557, 578, 822, 1023, 1079
BfmI CTRYAG 2 cut(s) 503, 792
BisI GCNGC 3 cut(s) 792, 1347, 1551
BlpI GCTNAGC 1 cut(s) 1113
BlsI GCNGC 3 cut(s) 793, 1348, 1552
Bme1390I CCNGG 2 cut(s) 369, 850
BmgT120I GGNCC 1 cut(s) 148
BmiI GGNNCC 2 cut(s) 1136, 1456
BmrFI CCNGG 2 cut(s) 369, 850
BmrI ACTGGG 2 cut(s) 104, 145
BmsI GCATC 7 cut(s) 286, 399, 481, 564, 1350, 1389, 1500
BmuI ACTGGG 2 cut(s) 104, 145
BpiI GAAGAC 1 cut(s) 164
BpmI CTGGAG 1 cut(s) 390
Bpu1102I GCTNAGC 1 cut(s) 1113
BpuEI CTTGAG 3 cut(s) 162, 1148, 1483
BsaI GGTCTC 2 cut(s) 212, 1298
BsaJI CCNNGG 3 cut(s) 848, 849, 1518
Bsc4I CCNNNNNNNGG 5 cut(s) 194, 374, 853, 944, 1464
Bse1I ACTGG 3 cut(s) 110, 151, 1495
Bse3DI GCAATG 2 cut(s) 1155, 1297
BseBI CCWGG 2 cut(s) 369, 850
BseDI CCNNGG 3 cut(s) 848, 849, 1518
BseGI GGATG 4 cut(s) 18, 496, 1204, 1540
BseLI CCNNNNNNNGG 5 cut(s) 194, 374, 853, 944, 1464
BseMI GCAATG 2 cut(s) 1155, 1297
BseMII CTCAG 5 cut(s) 95, 440, 715, 1218, 1428
BseNI ACTGG 3 cut(s) 110, 151, 1495
BseRI GAGGAG 1 cut(s) 611
BseSI GKGCMC 1 cut(s) 1061
BseXI GCAGC 3 cut(s) 778, 1333, 1562
BseYI CCCAGC 1 cut(s) 977
BshFI GGCC 5 cut(s) 149, 244, 324, 699, 948
BshNI GGYRCC 1 cut(s) 1454
BsiHKAI GWGCWC 1 cut(s) 314
BslFI GGGAC 1 cut(s) 1099
BslI CCNNNNNNNGG 5 cut(s) 194, 374, 853, 944, 1464
BsmAI GTCTC 3 cut(s) 171, 212, 1298
BsmFI GGGAC 1 cut(s) 1099
BsnI GGCC 5 cut(s) 149, 244, 324, 699, 948
Bso31I GGTCTC 2 cut(s) 212, 1298
Bsp1286I GDGCHC 2 cut(s) 314, 1061
Bsp143I GATC 3 cut(s) 265, 475, 535
Bsp1720I GCTNAGC 1 cut(s) 1113
BspACI CCGC 5 cut(s) 494, 854, 1047, 1269, 1562
BspANI GGCC 5 cut(s) 149, 244, 324, 699, 948
BspCNI CTCAG 5 cut(s) 94, 439, 714, 1217, 1429
BspHI TCATGA 1 cut(s) 1248
BspLI GGNNCC 2 cut(s) 1136, 1456
BspMAI CTGCAG 2 cut(s) 507, 796
BspPI GGATC 1 cut(s) 530
BspT107I GGYRCC 1 cut(s) 1454
BspTNI GGTCTC 2 cut(s) 212, 1298
BsrDI GCAATG 2 cut(s) 1155, 1297
BsrI ACTGG 3 cut(s) 110, 151, 1495
BssECI CCNNGG 3 cut(s) 848, 849, 1518
BssMI GATC 3 cut(s) 265, 475, 535
BssNAI GTATAC 1 cut(s) 984
BssT1I CCWWGG 1 cut(s) 1518
Bst1107I GTATAC 1 cut(s) 984
Bst2UI CCWGG 2 cut(s) 369, 850
Bst4CI ACNGT 2 cut(s) 93, 364
BstAPI GCANNNNNTGC 1 cut(s) 1346
BstC8I GCNNGC 1 cut(s) 697
BstDEI CTNAG 8 cut(s) 81, 426, 701, 737, 1113, 1204, 1437, 1567
BstENI CCTNNNNNAGG 2 cut(s) 372, 1462
BstF5I GGATG 4 cut(s) 18, 496, 1204, 1540
BstKTI GATC 3 cut(s) 268, 478, 538
BstMAI GTCTC 3 cut(s) 171, 212, 1298
BstMBI GATC 3 cut(s) 265, 475, 535
BstMWI GCNNNNNNNGC 3 cut(s) 395, 1346, 1559
BstNI CCWGG 2 cut(s) 369, 850
BstNSI RCATGY 1 cut(s) 895
BstSCI CCNGG 2 cut(s) 367, 848
BstSFI CTRYAG 2 cut(s) 503, 792
BstSLI GKGCMC 1 cut(s) 1061
BstV1I GCAGC 3 cut(s) 778, 1333, 1562
BstV2I GAAGAC 1 cut(s) 164
BstX2I RGATCY 1 cut(s) 535
BstXI CCANNNNNNTGG 1 cut(s) 956
BstYI RGATCY 1 cut(s) 535
BstZ17I GTATAC 1 cut(s) 984
BsuRI GGCC 5 cut(s) 149, 244, 324, 699, 948
BtsCI GGATG 4 cut(s) 18, 496, 1204, 1540
BtsIMutI CAGTG 3 cut(s) 30, 709, 1502
Cac8I GCNNGC 1 cut(s) 697
CaiI CAGNNNCTG 2 cut(s) 368, 1346
CciI TCATGA 1 cut(s) 1248
Cfr13I GGNCC 1 cut(s) 148
Csp6I GTAC 3 cut(s) 365, 383, 895
CviAII CATG 6 cut(s) 163, 240, 320, 566, 892, 1249
CviQI GTAC 3 cut(s) 365, 383, 895
DdeI CTNAG 8 cut(s) 81, 426, 701, 737, 1113, 1204, 1437, 1567
DpnI GATC 3 cut(s) 267, 477, 537
DpnII GATC 3 cut(s) 265, 475, 535
EaeI YGGCCR 2 cut(s) 242, 946
EciI GGCGGA 2 cut(s) 1036, 1284
Ecl136II GAGCTC 1 cut(s) 312
Eco130I CCWWGG 1 cut(s) 1518
Eco147I AGGCCT 1 cut(s) 699
Eco24I GRGCYC 1 cut(s) 314
Eco31I GGTCTC 2 cut(s) 212, 1298
Eco53kI GAGCTC 1 cut(s) 312
Eco57I CTGAAG 2 cut(s) 900, 1026
EcoICRI GAGCTC 1 cut(s) 312
EcoNI CCTNNNNNAGG 2 cut(s) 372, 1462
EcoRI GAATTC 1 cut(s) 497
EcoRII CCWGG 2 cut(s) 367, 848
EcoT14I CCWWGG 1 cut(s) 1518
EcoT38I GRGCYC 1 cut(s) 314
ErhI CCWWGG 1 cut(s) 1518
FaeI CATG 6 cut(s) 166, 243, 323, 569, 895, 1252
FaqI GGGAC 1 cut(s) 1099
FatI CATG 6 cut(s) 162, 239, 319, 565, 891, 1248
FbaI TGATCA 1 cut(s) 265
FblI GTMKAC 1 cut(s) 983
Fnu4HI GCNGC 3 cut(s) 792, 1347, 1551
FokI GGATG 4 cut(s) 5, 503, 1211, 1547
FriOI GRGCYC 1 cut(s) 314
Fsp4HI GCNGC 3 cut(s) 792, 1347, 1551
FspBI CTAG 6 cut(s) 549, 557, 578, 822, 1023, 1079
GluI GCNGC 3 cut(s) 792, 1347, 1551
GsaI CCCAGC 1 cut(s) 981
GsuI CTGGAG 1 cut(s) 390
HaeIII GGCC 5 cut(s) 149, 244, 324, 699, 948
Hin1II CATG 6 cut(s) 166, 243, 323, 569, 895, 1252
HincII GTYRAC 2 cut(s) 87, 280
HindII GTYRAC 2 cut(s) 87, 280
HinfI GANTC 5 cut(s) 433, 509, 767, 778, 1202
HphI GGTGA 3 cut(s) 19, 34, 347
Hpy166II GTNNAC 5 cut(s) 87, 280, 385, 614, 984
Hpy188I TCNGA 9 cut(s) 351, 408, 625, 974, 1006, 1207, 1336, 1438, 1534
Hpy8I GTNNAC 5 cut(s) 87, 280, 385, 614, 984
HpyAV CCTTC 7 cut(s) 56, 668, 1011, 1259, 1318, 1322, 1532
HpyCH4III ACNGT 2 cut(s) 93, 364
HpyCH4IV ACGT 1 cut(s) 1296
HpyCH4V TGCA 8 cut(s) 505, 695, 794, 1160, 1181, 1321, 1363, 1550
HpyF10VI GCNNNNNNNGC 3 cut(s) 395, 1346, 1559
HpyF3I CTNAG 8 cut(s) 81, 426, 701, 737, 1113, 1204, 1437, 1567
HpySE526I ACGT 1 cut(s) 1296
Hsp92II CATG 6 cut(s) 166, 243, 323, 569, 895, 1252
Ksp22I TGATCA 1 cut(s) 265
Kzo9I GATC 3 cut(s) 265, 475, 535
LmnI GCTCC 2 cut(s) 309, 729
Lsp1109I GCAGC 3 cut(s) 778, 1333, 1562
LweI GCATC 7 cut(s) 286, 399, 481, 564, 1350, 1389, 1500
MaeI CTAG 6 cut(s) 549, 557, 578, 822, 1023, 1079
MaeII ACGT 1 cut(s) 1296
MaeIII GTNAC 3 cut(s) 335, 740, 1026
MalI GATC 3 cut(s) 267, 477, 537
MboI GATC 3 cut(s) 265, 475, 535
MboII GAAGA 6 cut(s) 41, 133, 169, 538, 678, 893
MflI RGATCY 1 cut(s) 535
MhlI GDGCHC 2 cut(s) 314, 1061
MlsI TGGCCA 2 cut(s) 244, 948
MluCI AATT 9 cut(s) 246, 315, 497, 650, 678, 752, 954, 1163, 1316
MluNI TGGCCA 2 cut(s) 244, 948
MlyI GAGTC 1 cut(s) 1196
Mox20I TGGCCA 2 cut(s) 244, 948
MscI TGGCCA 2 cut(s) 244, 948
MseI TTAA 4 cut(s) 249, 585, 1314, 1583
Msp20I TGGCCA 2 cut(s) 244, 948
MspA1I CMGCKG 1 cut(s) 1553
MspR9I CCNGG 2 cut(s) 369, 850
MvaI CCWGG 2 cut(s) 369, 850
MwoI GCNNNNNNNGC 3 cut(s) 395, 1346, 1559
NdeII GATC 3 cut(s) 265, 475, 535
NlaIII CATG 6 cut(s) 166, 243, 323, 569, 895, 1252
NlaIV GGNNCC 2 cut(s) 1136, 1456
NmuCI GTSAC 1 cut(s) 335
NspI RCATGY 1 cut(s) 895
PagI TCATGA 1 cut(s) 1248
PasI CCCWGGG 1 cut(s) 849
PceI AGGCCT 1 cut(s) 699
PciI ACATGT 1 cut(s) 891
PfeI GAWTC 4 cut(s) 433, 509, 767, 778
PflFI GACNNNGTC 1 cut(s) 163
PkrI GCNGC 3 cut(s) 793, 1348, 1552
PleI GAGTC 1 cut(s) 1196
PpsI GAGTC 1 cut(s) 1196
PscI ACATGT 1 cut(s) 891
PshBI ATTAAT 1 cut(s) 249
PsiI TTATAA 1 cut(s) 1419
Psp124BI GAGCTC 1 cut(s) 314
Psp6I CCWGG 2 cut(s) 367, 848
PspFI CCCAGC 1 cut(s) 977
PspGI CCWGG 2 cut(s) 367, 848
PspN4I GGNNCC 2 cut(s) 1136, 1456
PspPI GGNCC 1 cut(s) 148
PstI CTGCAG 2 cut(s) 507, 796
PstNI CAGNNNCTG 2 cut(s) 368, 1346
PsuI RGATCY 1 cut(s) 535
PsyI GACNNNGTC 1 cut(s) 163
PvuII CAGCTG 1 cut(s) 1553
RsaI GTAC 3 cut(s) 366, 384, 896
RsaNI GTAC 3 cut(s) 365, 383, 895
SacI GAGCTC 1 cut(s) 314
SaqAI TTAA 4 cut(s) 249, 585, 1314, 1583
SatI GCNGC 3 cut(s) 792, 1347, 1551
Sau3AI GATC 3 cut(s) 265, 475, 535
Sau96I GGNCC 1 cut(s) 148
SbfI CCTGCAGG 1 cut(s) 507
SchI GAGTC 1 cut(s) 1196
ScrFI CCNGG 2 cut(s) 369, 850
SdaI CCTGCAGG 1 cut(s) 507
SduI GDGCHC 2 cut(s) 314, 1061
SfaNI GCATC 7 cut(s) 286, 399, 481, 564, 1350, 1389, 1500
SfcI CTRYAG 2 cut(s) 503, 792
SmlI CTYRAG 3 cut(s) 177, 1127, 1462
SmoI CTYRAG 3 cut(s) 177, 1127, 1462
Sse8387I CCTGCAGG 1 cut(s) 507
Sse9I AATT 9 cut(s) 246, 315, 497, 650, 678, 752, 954, 1163, 1316
SseBI AGGCCT 1 cut(s) 699
SsiI CCGC 5 cut(s) 494, 854, 1047, 1269, 1562
SspMI CTAG 6 cut(s) 549, 557, 578, 822, 1023, 1079
SstI GAGCTC 1 cut(s) 314
StuI AGGCCT 1 cut(s) 699
StyD4I CCNGG 2 cut(s) 367, 848
StyI CCWWGG 1 cut(s) 1518
TaaI ACNGT 2 cut(s) 93, 364
TaiI ACGT 1 cut(s) 1299
TaqI TCGA 2 cut(s) 95, 478
TaqII GACCGA 1 cut(s) 609
TasI AATT 9 cut(s) 246, 315, 497, 650, 678, 752, 954, 1163, 1316
TfiI GAWTC 4 cut(s) 433, 509, 767, 778
Tru1I TTAA 4 cut(s) 249, 585, 1314, 1583
Tru9I TTAA 4 cut(s) 249, 585, 1314, 1583
TscAI CASTG 3 cut(s) 37, 709, 1502
TseFI GTSAC 1 cut(s) 335
TseI GCWGC 3 cut(s) 791, 1346, 1550
Tsp45I GTSAC 1 cut(s) 335
TspGWI ACGGA 1 cut(s) 1183
TspRI CASTG 3 cut(s) 37, 709, 1502
Tth111I GACNNNGTC 1 cut(s) 163
VspI ATTAAT 1 cut(s) 249
XagI CCTNNNNNAGG 2 cut(s) 372, 1462
XapI RAATTY 2 cut(s) 497, 752
XbaI TCTAGA 2 cut(s) 548, 556
XceI RCATGY 1 cut(s) 895
XmiI GTMKAC 1 cut(s) 983
XspI CTAG 6 cut(s) 549, 557, 578, 822, 1023, 1079
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.