MD02G1065100.v1.1

histidine-containing phosphotransfer protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr02
OG0001440
Physical Location & Seq
Forward (+)
5274203 .. 5275042
840 bp
Loading structure...
UTR
Exon/CDS
Intron
MD02G1065100.v1.1.491

Sequence Viewer

Length: 219 bp
ATGGAGAGCAATTCCTTGCGTGAAAAAGTTGCAGCCATGAGGCAATCTCTCTTTGATGAGGAAATTTTGGACAACCAGTTTGTGCAGATGGAGCGATTGGAAGATGTTGACAACCCCAACTTTGCTGAGGAGCTTATGACCTTCGTTGGAGCTAACAAAGCGTGGATTGAGACCAACGAGATGAGGGAGGCTTTCAAGTCCGAACACGTTGAAAGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04075 map04075
Pfam Domains
Protein Families
Hpt

Protein Analysis

73

Amino Acids

8.53

Weight (kDa)

4.42

Isoelectric Point (pI)

38.64

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 1 cut(s) 63
AflIII ACRYGT 1 cut(s) 205
AgsI TTSAA 2 cut(s) 196, 212
AluBI AGCT 2 cut(s) 133, 152
AluI AGCT 2 cut(s) 133, 152
Alw26I GTCTC 1 cut(s) 164
ApeKI GCWGC 1 cut(s) 32
ApoI RAATTY 1 cut(s) 63
ArsI GACNNNNNNTTYG 2 cut(s) 62, 94
BbvCI CCTCAGC 1 cut(s) 126
BbvI GCAGC 1 cut(s) 44
BccI CCATC 1 cut(s) 82
BcoDI GTCTC 1 cut(s) 164
BisI GCNGC 1 cut(s) 33
BlsI GCNGC 1 cut(s) 34
BplI GAGNNNNNCTC 2 cut(s) 31, 63
Bpu10I CCTNAGC 1 cut(s) 126
BsaI GGTCTC 1 cut(s) 164
Bse1I ACTGG 1 cut(s) 76
BseMII CTCAG 1 cut(s) 117
BseNI ACTGG 1 cut(s) 76
BseRI GAGGAG 1 cut(s) 143
BseXI GCAGC 1 cut(s) 44
BsgI GTGCAG 1 cut(s) 104
BsmAI GTCTC 1 cut(s) 164
Bso31I GGTCTC 1 cut(s) 164
BspCNI CTCAG 1 cut(s) 118
BspTNI GGTCTC 1 cut(s) 164
BsrI ACTGG 1 cut(s) 76
BstDEI CTNAG 1 cut(s) 126
BstMAI GTCTC 1 cut(s) 164
BstMWI GCNNNNNNNGC 2 cut(s) 91, 158
BstV1I GCAGC 1 cut(s) 44
CviAII CATG 1 cut(s) 37
CviJI RGCY 4 cut(s) 35, 133, 152, 191
CviKI_1 RGCY 4 cut(s) 35, 133, 152, 191
DdeI CTNAG 1 cut(s) 126
Eco31I GGTCTC 1 cut(s) 164
FaeI CATG 1 cut(s) 40
FaiI YATR 2 cut(s) 38, 137
FatI CATG 1 cut(s) 36
Fnu4HI GCNGC 1 cut(s) 33
Fsp4HI GCNGC 1 cut(s) 33
GluI GCNGC 1 cut(s) 33
Hin1II CATG 1 cut(s) 40
HincII GTYRAC 1 cut(s) 109
HindII GTYRAC 1 cut(s) 109
Hpy166II GTNNAC 1 cut(s) 109
Hpy188I TCNGA 1 cut(s) 202
Hpy8I GTNNAC 1 cut(s) 109
HpyAV CCTTC 1 cut(s) 151
HpyCH4IV ACGT 1 cut(s) 207
HpyCH4V TGCA 2 cut(s) 32, 85
HpyF10VI GCNNNNNNNGC 2 cut(s) 91, 158
HpyF3I CTNAG 1 cut(s) 126
HpySE526I ACGT 1 cut(s) 207
Hsp92II CATG 1 cut(s) 40
LmnI GCTCC 3 cut(s) 91, 130, 149
LpnPI CCDG 1 cut(s) 89
Lsp1109I GCAGC 1 cut(s) 44
MaeII ACGT 1 cut(s) 207
MboII GAAGA 1 cut(s) 113
MluCI AATT 2 cut(s) 10, 63
MmeI TCCRAC 1 cut(s) 127
MnlI CCTC 5 cut(s) 33, 52, 121, 177, 181
MwoI GCNNNNNNNGC 2 cut(s) 91, 158
NlaIII CATG 1 cut(s) 40
PkrI GCNGC 1 cut(s) 34
SatI GCNGC 1 cut(s) 33
SetI ASST 5 cut(s) 135, 143, 154, 210, 218
SgeI CNNG 7 cut(s) 28, 32, 49, 88, 174, 190, 208
Sse9I AATT 2 cut(s) 10, 63
TaiI ACGT 1 cut(s) 210
TasI AATT 2 cut(s) 10, 63
TseI GCWGC 1 cut(s) 32
XapI RAATTY 1 cut(s) 63
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.