RLG00000030136

histidine-containing phosphotransfer protein

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
Physical Location & Seq
Reverse (-)
56189805 .. 56191694
1890 bp
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UTR
Exon/CDS
Intron
RLM00000030136

Sequence Viewer

Length: 405 bp
ATGGTTGGTTTCCACGTGGCTCTGTTTGCTTGCTCCACGAAGAGAGAGAGAGAGATTCAGGATCGAGGACAAAGGAAGAAGAAAGGGGAAAGAAACGGAACAGAGGTAGAGAAGAAGAAAGGAGGAGAAGGAAATAAGAAGACCCCCATCAGTAGCTATGAGAACAAGATTGATGAAATGAAGCCCATGACAAGACAGGAGTATGTTGCATCTTTGAGGAGAAAGGAAACCCCTCATCATTCTTATAATTTGGACAATCATATGCATCAGTTCAAGGGAAGTAGCTCAAGCATCAGAACCAAAAAGGTGAAAGCTGAATGCCAACAGTTCAGGGAATATTGTAGGGCGGGAAATGGAGAAAGTTGGTTATTGTTTGGAACAGCACACGAGAGGATCAGAGGATGA

Protein Analysis

135

Amino Acids

15.55

Weight (kDa)

9.85

Isoelectric Point (pI)

33.35

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 246
AciI CCGC 1 cut(s) 347
AclWI GGATC 2 cut(s) 69, 401
AcvI CACGTG 1 cut(s) 16
AgsI TTSAA 1 cut(s) 274
AluBI AGCT 3 cut(s) 156, 285, 314
AluI AGCT 3 cut(s) 156, 285, 314
AlwI GGATC 2 cut(s) 69, 401
AsuHPI GGTGA 1 cut(s) 319
BauI CACGAG 1 cut(s) 386
BbrPI CACGTG 1 cut(s) 16
BbsI GAAGAC 1 cut(s) 146
BccI CCATC 1 cut(s) 155
BmsI GCATC 3 cut(s) 218, 274, 300
BpiI GAAGAC 1 cut(s) 146
BpuEI CTTGAG 1 cut(s) 271
BsaAI YACGTR 1 cut(s) 16
BseRI GAGGAG 2 cut(s) 138, 232
BsmI GAATGC 1 cut(s) 323
Bsp143I GATC 2 cut(s) 61, 393
BspACI CCGC 1 cut(s) 347
BspPI GGATC 2 cut(s) 69, 401
BssMI GATC 2 cut(s) 61, 393
BssSI CACGAG 1 cut(s) 386
Bst2BI CACGAG 1 cut(s) 386
Bst4CI ACNGT 1 cut(s) 327
Bst6I CTCTTC 1 cut(s) 35
BstBAI YACGTR 1 cut(s) 16
BstC8I GCNNGC 1 cut(s) 31
BstKTI GATC 2 cut(s) 64, 396
BstMBI GATC 2 cut(s) 61, 393
BstMWI GCNNNNNNNGC 1 cut(s) 26
BstV2I GAAGAC 1 cut(s) 146
Cac8I GCNNGC 1 cut(s) 31
CviAII CATG 1 cut(s) 187
CviJI RGCY 5 cut(s) 20, 156, 184, 285, 314
CviKI_1 RGCY 5 cut(s) 20, 156, 184, 285, 314
DpnI GATC 2 cut(s) 63, 395
DpnII GATC 2 cut(s) 61, 393
Eam1104I CTCTTC 1 cut(s) 35
EarI CTCTTC 1 cut(s) 35
Eco72I CACGTG 1 cut(s) 16
EcoT22I ATGCAT 1 cut(s) 267
FaeI CATG 1 cut(s) 190
FaiI YATR 6 cut(s) 159, 188, 204, 246, 261, 263
FatI CATG 1 cut(s) 186
FauI CCCGC 1 cut(s) 340
FauNDI CATATG 1 cut(s) 261
Hin1II CATG 1 cut(s) 190
HinfI GANTC 1 cut(s) 55
HphI GGTGA 1 cut(s) 319
Hpy188I TCNGA 2 cut(s) 296, 398
Hpy188III TCNNGA 1 cut(s) 59
HpyAV CCTTC 1 cut(s) 122
HpyCH4III ACNGT 1 cut(s) 327
HpyCH4IV ACGT 1 cut(s) 15
HpyCH4V TGCA 2 cut(s) 209, 265
HpyF10VI GCNNNNNNNGC 1 cut(s) 26
HpySE526I ACGT 1 cut(s) 15
Hsp92II CATG 1 cut(s) 190
Kzo9I GATC 2 cut(s) 61, 393
LmnI GCTCC 1 cut(s) 38
LpnPI CCDG 3 cut(s) 44, 182, 316
LweI GCATC 3 cut(s) 218, 274, 300
MaeII ACGT 1 cut(s) 15
MalI GATC 2 cut(s) 63, 395
MboI GATC 2 cut(s) 61, 393
MboII GAAGA 6 cut(s) 52, 88, 91, 124, 127, 151
MluCI AATT 1 cut(s) 247
MnlI CCTC 7 cut(s) 59, 97, 116, 210, 243, 384, 392
Mph1103I ATGCAT 1 cut(s) 267
Mva1269I GAATGC 1 cut(s) 323
MwoI GCNNNNNNNGC 1 cut(s) 26
NdeI CATATG 1 cut(s) 261
NdeII GATC 2 cut(s) 61, 393
NlaIII CATG 1 cut(s) 190
NsiI ATGCAT 1 cut(s) 267
PctI GAATGC 1 cut(s) 323
PfeI GAWTC 1 cut(s) 55
PmaCI CACGTG 1 cut(s) 16
PmlI CACGTG 1 cut(s) 16
Ppu21I YACGTR 1 cut(s) 16
PsiI TTATAA 1 cut(s) 246
PspCI CACGTG 1 cut(s) 16
Sau3AI GATC 2 cut(s) 61, 393
SetI ASST 6 cut(s) 18, 108, 158, 287, 309, 316
SfaNI GCATC 3 cut(s) 218, 274, 300
SmlI CTYRAG 1 cut(s) 286
SmoI CTYRAG 1 cut(s) 286
Sse9I AATT 1 cut(s) 247
SsiI CCGC 1 cut(s) 347
SspI AATATT 1 cut(s) 338
TaaI ACNGT 1 cut(s) 327
TaiI ACGT 1 cut(s) 18
TaqI TCGA 1 cut(s) 64
TasI AATT 1 cut(s) 247
TfiI GAWTC 1 cut(s) 55
TspDTI ATGAA 2 cut(s) 189, 194
TspGWI ACGGA 1 cut(s) 111
Zsp2I ATGCAT 1 cut(s) 267
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.