pycom15g17520

histidine-containing phosphotransfer protein

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr15
Physical Location & Seq
Forward (+)
12393970 .. 12394288
319 bp
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UTR
Exon/CDS
Intron
pycom15g17520.2

Sequence Viewer

Length: 216 bp
ATGTCTGCGAAGATCAAGAAAATGGAGGGCAATTCCTTGCGTGAACAAGTTGCAGCCATGAGGCAATCTCTCTTTGATGAGGAAATTTTGGACAAACAGTTTGTGCAGATGGAGGAATTGGAAGATGTGCACAACCCCAACTTTGCTGAGGAGCTTATGACCTTGTATTTCAGGGACTCCTCCAAACTGTTAGTTTCTGTGGAGAAAGCAATGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

72

Amino Acids

8.3

Weight (kDa)

4.75

Isoelectric Point (pI)

58.61

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 1 cut(s) 84
AluBI AGCT 1 cut(s) 154
AluI AGCT 1 cut(s) 154
Alw21I GWGCWC 1 cut(s) 132
Alw44I GTGCAC 1 cut(s) 128
ApaLI GTGCAC 1 cut(s) 128
ApeKI GCWGC 1 cut(s) 53
ApoI RAATTY 1 cut(s) 84
ArsI GACNNNNNNTTYG 2 cut(s) 83, 115
BaeGI GKGCMC 1 cut(s) 132
Bbv12I GWGCWC 1 cut(s) 132
BbvCI CCTCAGC 1 cut(s) 147
BbvI GCAGC 1 cut(s) 65
BccI CCATC 1 cut(s) 103
BisI GCNGC 1 cut(s) 54
BlsI GCNGC 1 cut(s) 55
BplI GAGNNNNNCTC 2 cut(s) 52, 84
Bpu10I CCTNAGC 1 cut(s) 147
Bse3DI GCAATG 1 cut(s) 216
BseMI GCAATG 1 cut(s) 216
BseMII CTCAG 1 cut(s) 138
BseRI GAGGAG 2 cut(s) 164, 169
BseSI GKGCMC 1 cut(s) 132
BseXI GCAGC 1 cut(s) 65
BsgI GTGCAG 1 cut(s) 125
BsiHKAI GWGCWC 1 cut(s) 132
BslFI GGGAC 1 cut(s) 188
BsmFI GGGAC 1 cut(s) 188
Bsp1286I GDGCHC 1 cut(s) 132
Bsp143I GATC 1 cut(s) 12
BspCNI CTCAG 1 cut(s) 139
BsrDI GCAATG 1 cut(s) 216
BssMI GATC 1 cut(s) 12
Bst4CI ACNGT 2 cut(s) 99, 189
BstDEI CTNAG 1 cut(s) 147
BstKTI GATC 1 cut(s) 15
BstMBI GATC 1 cut(s) 12
BstSLI GKGCMC 1 cut(s) 132
BstV1I GCAGC 1 cut(s) 65
CviAII CATG 1 cut(s) 58
CviJI RGCY 2 cut(s) 56, 154
CviKI_1 RGCY 2 cut(s) 56, 154
DdeI CTNAG 1 cut(s) 147
DpnI GATC 1 cut(s) 14
DpnII GATC 1 cut(s) 12
FaeI CATG 1 cut(s) 61
FaiI YATR 2 cut(s) 59, 158
FaqI GGGAC 1 cut(s) 188
FatI CATG 1 cut(s) 57
Fnu4HI GCNGC 1 cut(s) 54
Fsp4HI GCNGC 1 cut(s) 54
GluI GCNGC 1 cut(s) 54
Hin1II CATG 1 cut(s) 61
HinfI GANTC 1 cut(s) 176
Hpy166II GTNNAC 2 cut(s) 44, 130
Hpy188III TCNNGA 1 cut(s) 16
Hpy8I GTNNAC 2 cut(s) 44, 130
HpyCH4III ACNGT 2 cut(s) 99, 189
HpyCH4V TGCA 3 cut(s) 53, 106, 130
HpyF3I CTNAG 1 cut(s) 147
Hsp92II CATG 1 cut(s) 61
Kzo9I GATC 1 cut(s) 12
LmnI GCTCC 1 cut(s) 151
LpnPI CCDG 1 cut(s) 157
Lsp1109I GCAGC 1 cut(s) 65
MalI GATC 1 cut(s) 14
MboI GATC 1 cut(s) 12
MboII GAAGA 2 cut(s) 22, 134
MhlI GDGCHC 1 cut(s) 132
MluCI AATT 3 cut(s) 31, 84, 116
MlyI GAGTC 1 cut(s) 170
MnlI CCTC 6 cut(s) 19, 54, 73, 106, 142, 190
NdeII GATC 1 cut(s) 12
NlaIII CATG 1 cut(s) 61
PkrI GCNGC 1 cut(s) 55
PleI GAGTC 1 cut(s) 170
PpsI GAGTC 1 cut(s) 170
SatI GCNGC 1 cut(s) 54
Sau3AI GATC 1 cut(s) 12
SchI GAGTC 1 cut(s) 170
SduI GDGCHC 1 cut(s) 132
SetI ASST 2 cut(s) 156, 164
SgeI CNNG 7 cut(s) 28, 49, 53, 59, 70, 175, 184
Sse9I AATT 3 cut(s) 31, 84, 116
TaaI ACNGT 2 cut(s) 99, 189
TasI AATT 3 cut(s) 31, 84, 116
TseI GCWGC 1 cut(s) 53
VneI GTGCAC 1 cut(s) 128
XapI RAATTY 1 cut(s) 84
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.