Rh2DG433800

histidine-containing phosphotransfer protein

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2D
Physical Location & Seq
Forward (+)
62707113 .. 62708175
1063 bp
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UTR
Exon/CDS
Intron
Rh2DG433800.1

Sequence Viewer

Length: 264 bp
ATGGAAAGAAACAATATCCGTAGGCAGGTTGCTCTGATGAGGCAGTCCCTCTTTACTCAGGGATATCTGGATGAACAGTTTGTTCAGTTGGAGGAGCTGCAAGATGATACTAATCCAAATTTTGTGGAGGAAATTGCTACATTGTACTACCGTGATTCATGCAGATCACTCCAAACCATAGAGCAGTCATTAGAGAAAACCCCTCACGATTTCAATAAGTTGGACAATCATATGCATCAATTCAAGGGAAGTAGCTCAAGGTAA

Protein Analysis

87

Amino Acids

10.41

Weight (kDa)

5.25

Isoelectric Point (pI)

77.43

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 16
AcsI RAATTY 1 cut(s) 118
AfaI GTAC 1 cut(s) 146
AfiI CCNNNNNNNGG 1 cut(s) 25
AgsI TTSAA 2 cut(s) 214, 244
AluBI AGCT 2 cut(s) 97, 255
AluI AGCT 2 cut(s) 97, 255
ApeKI GCWGC 1 cut(s) 97
ApoI RAATTY 1 cut(s) 118
BbvI GCAGC 1 cut(s) 84
BfuAI ACCTGC 1 cut(s) 16
BisI GCNGC 1 cut(s) 98
BlsI GCNGC 1 cut(s) 99
BmsI GCATC 1 cut(s) 244
BpuEI CTTGAG 1 cut(s) 241
BsaBI GATNNNNATC 1 cut(s) 111
Bsc4I CCNNNNNNNGG 1 cut(s) 25
Bse8I GATNNNNATC 1 cut(s) 111
BseGI GGATG 1 cut(s) 76
BseJI GATNNNNATC 1 cut(s) 111
BseLI CCNNNNNNNGG 1 cut(s) 25
BseMII CTCAG 1 cut(s) 71
BseRI GAGGAG 1 cut(s) 107
BseXI GCAGC 1 cut(s) 84
BslFI GGGAC 1 cut(s) 31
BslI CCNNNNNNNGG 1 cut(s) 25
BsmFI GGGAC 1 cut(s) 31
Bsp143I GATC 1 cut(s) 164
BspCNI CTCAG 1 cut(s) 70
BspMI ACCTGC 1 cut(s) 16
BssMI GATC 1 cut(s) 164
Bst4CI ACNGT 2 cut(s) 78, 152
BstDEI CTNAG 1 cut(s) 57
BstF5I GGATG 1 cut(s) 76
BstKTI GATC 1 cut(s) 167
BstMBI GATC 1 cut(s) 164
BstV1I GCAGC 1 cut(s) 84
BtsCI GGATG 1 cut(s) 76
BveI ACCTGC 1 cut(s) 16
Csp6I GTAC 1 cut(s) 145
CspCI CAANNNNNGTGG 2 cut(s) 105, 140
CviAII CATG 1 cut(s) 159
CviJI RGCY 2 cut(s) 97, 255
CviKI_1 RGCY 2 cut(s) 97, 255
CviQI GTAC 1 cut(s) 145
DdeI CTNAG 1 cut(s) 57
DpnI GATC 1 cut(s) 166
DpnII GATC 1 cut(s) 164
Eco32I GATATC 1 cut(s) 65
EcoRV GATATC 1 cut(s) 65
EcoT22I ATGCAT 1 cut(s) 237
FaeI CATG 1 cut(s) 162
FaiI YATR 4 cut(s) 160, 179, 231, 233
FaqI GGGAC 1 cut(s) 31
FatI CATG 1 cut(s) 158
FauNDI CATATG 1 cut(s) 231
Fnu4HI GCNGC 1 cut(s) 98
FokI GGATG 1 cut(s) 83
Fsp4HI GCNGC 1 cut(s) 98
GluI GCNGC 1 cut(s) 98
Hin1II CATG 1 cut(s) 162
HinfI GANTC 1 cut(s) 155
Hpy188I TCNGA 1 cut(s) 36
Hpy188III TCNNGA 2 cut(s) 68, 206
HpyCH4III ACNGT 2 cut(s) 78, 152
HpyCH4V TGCA 3 cut(s) 100, 162, 235
HpyF3I CTNAG 1 cut(s) 57
Hsp92II CATG 1 cut(s) 162
Kzo9I GATC 1 cut(s) 164
LmnI GCTCC 1 cut(s) 94
LpnPI CCDG 3 cut(s) 11, 44, 53
Lsp1109I GCAGC 1 cut(s) 84
LweI GCATC 1 cut(s) 244
MalI GATC 1 cut(s) 166
MboI GATC 1 cut(s) 164
MluCI AATT 3 cut(s) 118, 132, 239
MmeI TCCRAC 2 cut(s) 69, 201
MnlI CCTC 5 cut(s) 33, 59, 85, 121, 213
Mph1103I ATGCAT 1 cut(s) 237
NdeI CATATG 1 cut(s) 231
NdeII GATC 1 cut(s) 164
NlaIII CATG 1 cut(s) 162
NsiI ATGCAT 1 cut(s) 237
PfeI GAWTC 1 cut(s) 155
PkrI GCNGC 1 cut(s) 99
RsaI GTAC 1 cut(s) 146
RsaNI GTAC 1 cut(s) 145
SatI GCNGC 1 cut(s) 98
Sau3AI GATC 1 cut(s) 164
SetI ASST 4 cut(s) 30, 99, 257, 263
SfaNI GCATC 1 cut(s) 244
SgeI CNNG 8 cut(s) 38, 71, 80, 113, 164, 171, 218, 256
SmlI CTYRAG 1 cut(s) 256
SmoI CTYRAG 1 cut(s) 256
Sse9I AATT 3 cut(s) 118, 132, 239
TaaI ACNGT 2 cut(s) 78, 152
TasI AATT 3 cut(s) 118, 132, 239
TatI WGTACW 1 cut(s) 144
TfiI GAWTC 1 cut(s) 155
TseI GCWGC 1 cut(s) 97
TspDTI ATGAA 2 cut(s) 87, 147
TspGWI ACGGA 1 cut(s) 8
XapI RAATTY 1 cut(s) 118
Zsp2I ATGCAT 1 cut(s) 237
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.