pycom08g09240

histidine-containing phosphotransfer protein

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr8
Physical Location & Seq
Reverse (-)
7493023 .. 7493829
807 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom08g09240.3

Sequence Viewer

Length: 396 bp
ATGGCTCTAAAACCATACCAGAAAAAAAATTTGTACGCTAGGACAAATTCTTTAGACTTAGCCTTCAAAATTTATTTACTTGAATGTTTGCAGCATTACCTCGATCAGCAGCAATTCATTCAGTTGGAGGAATTGCAAGATGATGCAAACCCAAATTTTGTGGAGGAAATTGTGACATTGTTCTACAAAGACTCAGCTAGACTGTTCCAAAAGATTGAGCAAGCACTGTACAGTAGGCCTATAGATTTTGCCAAGCTGGATGATTACATGCACCAGTTCAACGGTAGTAGTTCAAGGGCTTTGGAGAGAGTGAAACAAGAGCATCAGACCTTGAGGATTCACCTTGAGAATTATTTTCAGGTATCATTACCCTCTCTAGTCTTGTGCCTAGAGTGA

Protein Analysis

132

Amino Acids

15.61

Weight (kDa)

5.55

Isoelectric Point (pI)

58.27

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 4 cut(s) 28, 46, 69, 154
AfaI GTAC 2 cut(s) 35, 230
AgsI TTSAA 4 cut(s) 67, 83, 280, 294
AluBI AGCT 2 cut(s) 197, 256
AluI AGCT 2 cut(s) 197, 256
AoxI GGCC 1 cut(s) 236
ApeKI GCWGC 2 cut(s) 91, 109
ApoI RAATTY 4 cut(s) 28, 46, 69, 154
AsuHPI GGTGA 1 cut(s) 332
BbvI GCAGC 2 cut(s) 103, 121
BfaI CTAG 4 cut(s) 39, 198, 377, 389
BfmI CTRYAG 1 cut(s) 240
BisI GCNGC 2 cut(s) 92, 110
BlsI GCNGC 2 cut(s) 93, 111
BmsI GCATC 2 cut(s) 133, 331
BpuEI CTTGAG 2 cut(s) 352, 365
Bse1I ACTGG 1 cut(s) 274
BseGI GGATG 1 cut(s) 265
BseMII CTCAG 1 cut(s) 207
BseNI ACTGG 1 cut(s) 274
BseXI GCAGC 2 cut(s) 103, 121
BshFI GGCC 1 cut(s) 238
BsnI GGCC 1 cut(s) 238
Bsp1407I TGTACA 1 cut(s) 228
Bsp143I GATC 1 cut(s) 103
BspANI GGCC 1 cut(s) 238
BspCNI CTCAG 1 cut(s) 206
BsrGI TGTACA 1 cut(s) 228
BsrI ACTGG 1 cut(s) 274
BssMI GATC 1 cut(s) 103
Bst4CI ACNGT 4 cut(s) 204, 228, 233, 284
BstAUI TGTACA 1 cut(s) 228
BstC8I GCNNGC 1 cut(s) 222
BstDEI CTNAG 2 cut(s) 58, 193
BstF5I GGATG 1 cut(s) 265
BstKTI GATC 1 cut(s) 106
BstMBI GATC 1 cut(s) 103
BstNSI RCATGY 1 cut(s) 271
BstSFI CTRYAG 1 cut(s) 240
BstV1I GCAGC 2 cut(s) 103, 121
BsuRI GGCC 1 cut(s) 238
BtsCI GGATG 1 cut(s) 265
BtsIMutI CAGTG 1 cut(s) 224
Cac8I GCNNGC 1 cut(s) 222
Csp6I GTAC 2 cut(s) 34, 229
CspCI CAANNNNNGTGG 2 cut(s) 141, 176
CviAII CATG 1 cut(s) 268
CviJI RGCY 6 cut(s) 5, 62, 197, 238, 256, 299
CviKI_1 RGCY 6 cut(s) 5, 62, 197, 238, 256, 299
CviQI GTAC 2 cut(s) 34, 229
DdeI CTNAG 2 cut(s) 58, 193
DpnI GATC 1 cut(s) 105
DpnII GATC 1 cut(s) 103
Eco147I AGGCCT 1 cut(s) 238
FaeI CATG 1 cut(s) 271
FaiI YATR 3 cut(s) 16, 242, 269
FatI CATG 1 cut(s) 267
Fnu4HI GCNGC 2 cut(s) 92, 110
FokI GGATG 1 cut(s) 272
Fsp4HI GCNGC 2 cut(s) 92, 110
FspBI CTAG 4 cut(s) 39, 198, 377, 389
GluI GCNGC 2 cut(s) 92, 110
HaeIII GGCC 1 cut(s) 238
Hin1II CATG 1 cut(s) 271
HinfI GANTC 2 cut(s) 191, 337
HphI GGTGA 1 cut(s) 332
Hpy188I TCNGA 1 cut(s) 327
HpyAV CCTTC 1 cut(s) 73
HpyCH4III ACNGT 4 cut(s) 204, 228, 233, 284
HpyCH4V TGCA 4 cut(s) 91, 136, 146, 271
HpyF3I CTNAG 2 cut(s) 58, 193
Hsp92II CATG 1 cut(s) 271
Kzo9I GATC 1 cut(s) 103
LpnPI CCDG 4 cut(s) 32, 242, 287, 344
Lsp1109I GCAGC 2 cut(s) 103, 121
LweI GCATC 2 cut(s) 133, 331
MaeI CTAG 4 cut(s) 39, 198, 377, 389
MaeIII GTNAC 1 cut(s) 172
MalI GATC 1 cut(s) 105
MboI GATC 1 cut(s) 103
MluCI AATT 8 cut(s) 28, 46, 69, 113, 131, 154, 168, 349
MlyI GAGTC 1 cut(s) 185
MmeI TCCRAC 1 cut(s) 105
MnlI CCTC 5 cut(s) 110, 121, 157, 327, 382
NdeII GATC 1 cut(s) 103
NlaIII CATG 1 cut(s) 271
NmuCI GTSAC 1 cut(s) 172
NspI RCATGY 1 cut(s) 271
PceI AGGCCT 1 cut(s) 238
PfeI GAWTC 1 cut(s) 337
PkrI GCNGC 2 cut(s) 93, 111
PleI GAGTC 1 cut(s) 185
PpsI GAGTC 1 cut(s) 185
RsaI GTAC 2 cut(s) 35, 230
RsaNI GTAC 2 cut(s) 34, 229
SatI GCNGC 2 cut(s) 92, 110
Sau3AI GATC 1 cut(s) 103
SchI GAGTC 1 cut(s) 185
SetI ASST 6 cut(s) 102, 199, 258, 332, 345, 363
SfaNI GCATC 2 cut(s) 133, 331
SfcI CTRYAG 1 cut(s) 240
SmlI CTYRAG 2 cut(s) 331, 344
SmoI CTYRAG 2 cut(s) 331, 344
Sse9I AATT 8 cut(s) 28, 46, 69, 113, 131, 154, 168, 349
SseBI AGGCCT 1 cut(s) 238
SspMI CTAG 4 cut(s) 39, 198, 377, 389
StuI AGGCCT 1 cut(s) 238
TaaI ACNGT 4 cut(s) 204, 228, 233, 284
TaqI TCGA 1 cut(s) 102
TasI AATT 8 cut(s) 28, 46, 69, 113, 131, 154, 168, 349
TatI WGTACW 1 cut(s) 228
TfiI GAWTC 1 cut(s) 337
TscAI CASTG 1 cut(s) 231
TseFI GTSAC 1 cut(s) 172
TseI GCWGC 2 cut(s) 91, 109
Tsp45I GTSAC 1 cut(s) 172
TspDTI ATGAA 1 cut(s) 106
TspRI CASTG 1 cut(s) 231
XapI RAATTY 4 cut(s) 28, 46, 69, 154
XceI RCATGY 1 cut(s) 271
XspI CTAG 4 cut(s) 39, 198, 377, 389
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.