Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr07

Orthogroup ID

OG0000665

Physical Location & Seq

Genomic Coordinates Reverse (-)

23914880 .. 23917218

Gene Structure 2339 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD07G1164500.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1095 bp

ATGAATTGCTGGGGAAAATGGAAGCTTGTTATTGTCATGCTGGTCATTAACCTTGCATTAGCTATTGTAAATGTTCTTCTTAAGAAGACTCTTGATGGAGGATTAAACGGTTTGGTAATTGTTACTTATCGACAGTCGGTTTCTGCTGTTTTCTTGACACCCATTGCCTTCTTTTGGGAAAGCAAAAGCAGACCGGAGCTTACAACTCGAATATTATGCCTCCTTTTCATCAGTGCTCTTATTGGGGTAACTTTCACACAATACTTATTTCTTCTTGGACTTCAATACACCTCTGCTACATATTCCTGTGCATTCGTCAACATGGTGCCTGTCTACACTTTCCTATTGGCTCTACCATTTGGTCTAGAGAAAGTGAACATAAAGAGAAAGGATGGGATAGCTAAAATCCTGGGTGCCTTCATATGTATTGGTGGAGCTGTATCATTGATCTTATACAAAGGAATGCCACTAACCAACCAACATTCAGAATCCACACATCAAATGCAAAACCATGCCAATACAATGGCTTCATCAACAGCTAAAATGACTGAGAGGTGGGCTGGTTCAGCGTTTTTGGCATCAGGCTGCCTCTTGTGGTCTTCGTGGTTTCTCATCCAAGCAAAGATCGGCAAGAGCTACCCTTTTCAGTACTCTAGCACCGCGATATTGTCCTTCTTCGGCGCCATTCAATCCGCCATCTTGTGCTTCATAACCCAGAGGCACATCATCATGTCAATGTGGATTCTCAAGGGGAAGTTGGAGATCTTGAGTGTCGTATATGCTGGAGCAGTAGGATCAGGGTTATGCTATGTAGGGATGTCAAGGTGTGTGAAACAAAAGGGTGCACTCTTCACAGCAGCATTTACCCCCGTCACCCAGATATTTGTGGCCATGTTGGACTTCTCTTTCTTGCATGAACAAATTTACCTCGGAAGCATGGTGGGATCTGTTACTGTCATAATTGGCATGTACATTTTACTGTGGGGTAAAAGCAACGATAAAAAGGAAATGGTGATCAAGCAGACACAAGCAGTTGACCAAGATCCAGAATCTGGTCCAACGCCACAAGGCATGCCCCTTGATGTAAACAGATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005886 GO:0005887 GO:0005938 GO:0006810 GO:0007154 GO:0007165 GO:0008150 GO:0009719 GO:0009725 GO:0009733 GO:0009734 GO:0009755 GO:0009987 GO:0010033 GO:0016020 GO:0016021 GO:0022857 GO:0023052 GO:0031224 GO:0031226 GO:0032870 GO:0042221 GO:0044424 GO:0044425 GO:0044444 GO:0044459 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051179 GO:0051234 GO:0051716 GO:0055085 GO:0065007 GO:0070887 GO:0071310 GO:0071365 GO:0071495 GO:0071944 GO:0099568

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

EamA

Protein Analysis

365

Amino Acids

40.12

Weight (kDa)

9.38

Isoelectric Point (pI)

35.77

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
EamA	PF00892	10 - 143	1.1e-12	EamA-like transporter family
EamA	PF00892	188 - 327	1.5e-09	EamA-like transporter family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000665)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G30340 AT3G30340 AT4G01440 AT4G01440 AT4G01440 AT4G01440 AT4G01440
fragaria_vesca	FvH4_5g10300 FvH4_7g18160 FvH4_7g18160 FvH4_7g18160 FvH4_7g18160 FvH4_7g18160 FvH4_7g18160 FvH4_7g18160 FvH4_7g18160 FvH4_7g18160 FvH4_7g18160
malus_domestica	MD00G1118800.v1.1 MD01G1095400.v1.1 MD01G1095700.v1.1 MD01G1097400.v1.1 MD06G1125400.v1.1 MD07G1164500.v1.1
prunus_persica	Prupe.2G203500_v2.0.a1 Prupe.5G135800_v2.0.a1 Prupe.5G135800_v2.0.a1 Prupe.5G135800_v2.0.a1 Prupe.5G135800_v2.0.a1 Prupe.5G135800_v2.0.a1 Prupe.5G135800_v2.0.a1 Prupe.5G135800_v2.0.a1 Prupe.5G135800_v2.0.a1 Prupe.5G135800_v2.0.a1 Prupe.5G135800_v2.0.a1 Prupe.5G135800_v2.0.a1 Prupe.5G135800_v2.0.a1 Prupe.5G135800_v2.0.a1 Prupe.5G135800_v2.0.a1 Prupe.5G135800_v2.0.a1 Prupe.5G135800_v2.0.a1 Prupe.5G135800_v2.0.a1 Prupe.5G135800_v2.0.a1
pyrus_communis	pycom06g11570 pycom07g15960 pycom14g11730
rosa_chinensis	RchiOBHm_Chr1g0361761 RchiOBHm_Chr1g0361771 RchiOBHm_Chr7g0187931
rosa_laevigata	RLG00000004746 RLG00000027703 RLG00000027704
rosa_multiflora	Rmu_co8477061.1_g000001 Rmu_sc0015523.1_g000006 Rmu_sc0030043.1_g000001 Rmu_ssc0000124.1_g000022
rosa_roxburghii	Rroxscaffold_3G00266930 Rroxscaffold_4G00294710
rosa_rugosa	Rorug01G0291400 Rorug06G0485400 Rorug06G0485500
rosa_samantha	Rh1AG301800 Rh1AG301900 Rh1BG264600 Rh1BG264700 Rh1CG283100 Rh1CG283200 Rh1DG294600 Rh1DG294700 Rh7AG090600 Rh7BG092200 Rh7CG091300 Rh7DG093000
rosa_wichuraiana	Rw1G026740 Rw1G026750 Rw7G007820

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	3 cut(s)	325, 413, 680
AccB7I	CCANNNNNTGG	1 cut(s)	1052
AccI	GTMKAC	1 cut(s)	333
AccII	CGCG	1 cut(s)	662
AciI	CCGC	2 cut(s)	660, 693
AclWI	GGATC	3 cut(s)	802, 952, 1037
AcoI	YGGCCR	1 cut(s)	888
AcsI	RAATTY	1 cut(s)	921
AcyI	GRCGYC	1 cut(s)	681
AfaI	GTAC	2 cut(s)	650, 971
AfiI	CCNNNNNNNGG	2 cut(s)	174, 1052
AflII	CTTAAG	1 cut(s)	80
AgsI	TTSAA	2 cut(s)	284, 689
AjnI	CCWGG	1 cut(s)	408
AluBI	AGCT	7 cut(s)	25, 62, 199, 401, 437, 539, 636
AluI	AGCT	7 cut(s)	25, 62, 199, 401, 437, 539, 636
Alw21I	GWGCWC	2 cut(s)	238, 847
Alw44I	GTGCAC	1 cut(s)	843
AlwI	GGATC	3 cut(s)	802, 952, 1037
AlwNI	CAGNNNCTG	1 cut(s)	1052
AoxI	GGCC	1 cut(s)	888
ApaLI	GTGCAC	1 cut(s)	843
ApeKI	GCWGC	2 cut(s)	585, 857
ApoI	RAATTY	1 cut(s)	921
AspLEI	GCGC	1 cut(s)	683
AspS9I	GGNCC	1 cut(s)	1055
AsuHPI	GGTGA	2 cut(s)	865, 1024
AvaII	GGWCC	1 cut(s)	1055
BaeGI	GKGCMC	1 cut(s)	847
BalI	TGGCCA	1 cut(s)	890
BanI	GGYRCC	3 cut(s)	325, 413, 680
BarI	GAAGNNNNNNTAC	2 cut(s)	60, 92
BbsI	GAAGAC	2 cut(s)	92, 591
Bbv12I	GWGCWC	2 cut(s)	238, 847
BbvI	GCAGC	2 cut(s)	572, 869
BccI	CCATC	3 cut(s)	89, 386, 704
BcgI	CGANNNNNNTGC	2 cut(s)	198, 232
BciT130I	CCWGG	1 cut(s)	410
BclI	TGATCA	1 cut(s)	1014
BfaI	CTAG	2 cut(s)	365, 654
BfoI	RGCGCY	1 cut(s)	684
BfrI	CTTAAG	1 cut(s)	80
BglII	AGATCT	1 cut(s)	762
BisI	GCNGC	2 cut(s)	586, 858
BlsI	GCNGC	2 cut(s)	587, 859
BmcAI	AGTACT	1 cut(s)	650
Bme1390I	CCNGG	1 cut(s)	410
Bme18I	GGWCC	1 cut(s)	1055
BmgT120I	GGNCC	1 cut(s)	1055
BmiI	GGNNCC	3 cut(s)	327, 415, 682
BmrFI	CCNGG	1 cut(s)	410
BmsI	GCATC	1 cut(s)	587
BpiI	GAAGAC	2 cut(s)	92, 591
BpmI	CTGGAG	1 cut(s)	804
BpuEI	CTTGAG	2 cut(s)	731, 787
BsaHI	GRCGYC	1 cut(s)	681
BsaJI	CCNNGG	2 cut(s)	409, 928
BsaWI	WCCGGW	1 cut(s)	193
Bsc4I	CCNNNNNNNGG	2 cut(s)	174, 1052
Bse3DI	GCAATG	1 cut(s)	162
BseBI	CCWGG	1 cut(s)	410
BseDI	CCNNGG	2 cut(s)	409, 928
BseGI	GGATG	3 cut(s)	397, 612, 822
BseLI	CCNNNNNNNGG	2 cut(s)	174, 1052
BseMI	GCAATG	1 cut(s)	162
BseMII	CTCAG	1 cut(s)	540
BseSI	GKGCMC	1 cut(s)	847
BseXI	GCAGC	2 cut(s)	572, 869
BseYI	CCCAGC	1 cut(s)	9
Bsh1236I	CGCG	1 cut(s)	662
BshFI	GGCC	1 cut(s)	890
BshNI	GGYRCC	3 cut(s)	325, 413, 680
BsiHKAI	GWGCWC	2 cut(s)	238, 847
BsiSI	CCGG	1 cut(s)	194
BslI	CCNNNNNNNGG	2 cut(s)	174, 1052
BsmI	GAATGC	2 cut(s)	311, 468
BsnI	GGCC	1 cut(s)	890
Bsp1286I	GDGCHC	2 cut(s)	238, 847
Bsp1407I	TGTACA	1 cut(s)	969
Bsp143I	GATC	7 cut(s)	447, 624, 762, 794, 944, 1014, 1042
BspACI	CCGC	2 cut(s)	660, 693
BspANI	GGCC	1 cut(s)	890
BspCNI	CTCAG	1 cut(s)	541
BspFNI	CGCG	1 cut(s)	662
BspLI	GGNNCC	3 cut(s)	327, 415, 682
BspPI	GGATC	3 cut(s)	802, 952, 1037
BspT107I	GGYRCC	3 cut(s)	325, 413, 680
BspTI	CTTAAG	1 cut(s)	80
BsrDI	GCAATG	1 cut(s)	162
BsrGI	TGTACA	1 cut(s)	969
BssECI	CCNNGG	2 cut(s)	409, 928
BssMI	GATC	7 cut(s)	447, 624, 762, 794, 944, 1014, 1042
BssNI	GRCGYC	1 cut(s)	681
Bst2UI	CCWGG	1 cut(s)	410
Bst4CI	ACNGT	4 cut(s)	110, 135, 955, 981
Bst6I	CTCTTC	1 cut(s)	854
BstACI	GRCGYC	1 cut(s)	681
BstAFI	CTTAAG	1 cut(s)	80
BstAUI	TGTACA	1 cut(s)	969
BstC8I	GCNNGC	1 cut(s)	1073
BstDEI	CTNAG	1 cut(s)	549
BstF5I	GGATG	3 cut(s)	397, 612, 822
BstFNI	CGCG	1 cut(s)	662
BstH2I	RGCGCY	1 cut(s)	684
BstHHI	GCGC	1 cut(s)	683
BstKTI	GATC	7 cut(s)	450, 627, 765, 797, 947, 1017, 1045
BstMBI	GATC	7 cut(s)	447, 624, 762, 794, 944, 1014, 1042
BstMWI	GCNNNNNNNGC	2 cut(s)	566, 575
BstNI	CCWGG	1 cut(s)	410
BstNSI	RCATGY	2 cut(s)	970, 1075
BstSCI	CCNGG	1 cut(s)	408
BstSLI	GKGCMC	1 cut(s)	847
BstUI	CGCG	1 cut(s)	662
BstV1I	GCAGC	2 cut(s)	572, 869
BstV2I	GAAGAC	2 cut(s)	92, 591
BstX2I	RGATCY	3 cut(s)	762, 944, 1042
BstXI	CCANNNNNNTGG	1 cut(s)	523
BstYI	RGATCY	3 cut(s)	762, 944, 1042
BsuRI	GGCC	1 cut(s)	890
BtsCI	GGATG	3 cut(s)	397, 612, 822
BtsIMutI	CAGTG	1 cut(s)	238
Cac8I	GCNNGC	1 cut(s)	1073
CaiI	CAGNNNCTG	1 cut(s)	1052
CfoI	GCGC	1 cut(s)	683
Cfr13I	GGNCC	1 cut(s)	1055
Csp6I	GTAC	2 cut(s)	649, 970
CviAII	CATG	9 cut(s)	37, 322, 512, 730, 892, 914, 937, 967, 1072
CviQI	GTAC	2 cut(s)	649, 970
DdeI	CTNAG	1 cut(s)	549
DinI	GGCGCC	1 cut(s)	682
DpnI	GATC	7 cut(s)	449, 626, 764, 796, 946, 1016, 1044
DpnII	GATC	7 cut(s)	447, 624, 762, 794, 944, 1014, 1042
EaeI	YGGCCR	1 cut(s)	888
Eam1104I	CTCTTC	1 cut(s)	854
EarI	CTCTTC	1 cut(s)	854
EciI	GGCGGA	1 cut(s)	682
Eco47I	GGWCC	1 cut(s)	1055
EcoRII	CCWGG	1 cut(s)	408
EgeI	GGCGCC	1 cut(s)	682
EheI	GGCGCC	1 cut(s)	682
FaeI	CATG	9 cut(s)	40, 325, 515, 733, 895, 917, 940, 970, 1075
FatI	CATG	9 cut(s)	36, 321, 511, 729, 891, 913, 936, 966, 1071
FauNDI	CATATG	1 cut(s)	422
FbaI	TGATCA	1 cut(s)	1014
FblI	GTMKAC	1 cut(s)	333
Fnu4HI	GCNGC	2 cut(s)	586, 858
FokI	GGATG	3 cut(s)	404, 599, 829
Fsp4HI	GCNGC	2 cut(s)	586, 858
FspBI	CTAG	2 cut(s)	365, 654
GlaI	GCGC	1 cut(s)	682
GluI	GCNGC	2 cut(s)	586, 858
GsaI	CCCAGC	1 cut(s)	13
GsuI	CTGGAG	1 cut(s)	804
HaeII	RGCGCY	1 cut(s)	684
HaeIII	GGCC	1 cut(s)	890
HapII	CCGG	1 cut(s)	194
HhaI	GCGC	1 cut(s)	683
Hin1I	GRCGYC	1 cut(s)	681
Hin1II	CATG	9 cut(s)	40, 325, 515, 733, 895, 917, 940, 970, 1075
Hin6I	GCGC	1 cut(s)	681
HinP1I	GCGC	1 cut(s)	681
HincII	GTYRAC	2 cut(s)	319, 1036
HindII	GTYRAC	2 cut(s)	319, 1036
HindIII	AAGCTT	1 cut(s)	23
HinfI	GANTC	4 cut(s)	88, 488, 742, 1049
HpaII	CCGG	1 cut(s)	194
HphI	GGTGA	2 cut(s)	865, 1024
Hpy166II	GTNNAC	6 cut(s)	319, 334, 376, 845, 1036, 1087
Hpy188I	TCNGA	2 cut(s)	487, 932
Hpy188III	TCNNGA	5 cut(s)	92, 154, 365, 766, 1046
Hpy8I	GTNNAC	6 cut(s)	319, 334, 376, 845, 1036, 1087
HpyAV	CCTTC	3 cut(s)	178, 427, 682
HpyCH4III	ACNGT	4 cut(s)	110, 135, 955, 981
HpyCH4V	TGCA	5 cut(s)	56, 311, 505, 845, 913
HpyF10VI	GCNNNNNNNGC	2 cut(s)	566, 575
HpyF3I	CTNAG	1 cut(s)	549
Hsp92I	GRCGYC	1 cut(s)	681
Hsp92II	CATG	9 cut(s)	40, 325, 515, 733, 895, 917, 940, 970, 1075
HspAI	GCGC	1 cut(s)	681
KasI	GGCGCC	1 cut(s)	680
Ksp22I	TGATCA	1 cut(s)	1014
Kzo9I	GATC	7 cut(s)	447, 624, 762, 794, 944, 1014, 1042
LmnI	GCTCC	3 cut(s)	196, 434, 785
Lsp1109I	GCAGC	2 cut(s)	572, 869
LweI	GCATC	1 cut(s)	587
MaeI	CTAG	2 cut(s)	365, 654
MaeIII	GTNAC	4 cut(s)	121, 247, 871, 949
MalI	GATC	7 cut(s)	449, 626, 764, 796, 946, 1016, 1044
MboI	GATC	7 cut(s)	447, 624, 762, 794, 944, 1014, 1042
MboII	GAAGA	6 cut(s)	68, 97, 263, 591, 667, 841
MflI	RGATCY	3 cut(s)	762, 944, 1042
MhlI	GDGCHC	2 cut(s)	238, 847
MlsI	TGGCCA	1 cut(s)	890
MluCI	AATT	4 cut(s)	4, 117, 921, 960
MluNI	TGGCCA	1 cut(s)	890
Mly113I	GGCGCC	1 cut(s)	681
MlyI	GAGTC	1 cut(s)	82
MmeI	TCCRAC	3 cut(s)	738, 876, 1082
MnlI	CCTC	7 cut(s)	92, 230, 301, 546, 599, 711, 938
Mox20I	TGGCCA	1 cut(s)	890
MscI	TGGCCA	1 cut(s)	890
MseI	TTAA	3 cut(s)	48, 81, 104
MslI	CAYNNNNRTG	2 cut(s)	728, 734
Msp20I	TGGCCA	1 cut(s)	890
MspCI	CTTAAG	1 cut(s)	80
MspI	CCGG	1 cut(s)	194
MspR9I	CCNGG	1 cut(s)	410
Mva1269I	GAATGC	2 cut(s)	311, 468
MvaI	CCWGG	1 cut(s)	410
MvnI	CGCG	1 cut(s)	662
MwoI	GCNNNNNNNGC	2 cut(s)	566, 575
NarI	GGCGCC	1 cut(s)	681
NdeI	CATATG	1 cut(s)	422
NdeII	GATC	7 cut(s)	447, 624, 762, 794, 944, 1014, 1042
NlaIII	CATG	9 cut(s)	40, 325, 515, 733, 895, 917, 940, 970, 1075
NlaIV	GGNNCC	3 cut(s)	327, 415, 682
NmuCI	GTSAC	1 cut(s)	871
NspI	RCATGY	2 cut(s)	970, 1075
PaeI	GCATGC	1 cut(s)	1075
PctI	GAATGC	2 cut(s)	311, 468
PfeI	GAWTC	3 cut(s)	488, 742, 1049
PflMI	CCANNNNNTGG	1 cut(s)	1052
PkrI	GCNGC	2 cut(s)	587, 859
PleI	GAGTC	1 cut(s)	82
PluTI	GGCGCC	1 cut(s)	684
PpsI	GAGTC	1 cut(s)	82
Psp6I	CCWGG	1 cut(s)	408
PspFI	CCCAGC	1 cut(s)	9
PspGI	CCWGG	1 cut(s)	408
PspN4I	GGNNCC	3 cut(s)	327, 415, 682
PspPI	GGNCC	1 cut(s)	1055
PstNI	CAGNNNCTG	1 cut(s)	1052
PsuI	RGATCY	3 cut(s)	762, 944, 1042
RsaI	GTAC	2 cut(s)	650, 971
RsaNI	GTAC	2 cut(s)	649, 970
RseI	CAYNNNNRTG	2 cut(s)	728, 734
SaqAI	TTAA	3 cut(s)	48, 81, 104
SatI	GCNGC	2 cut(s)	586, 858
Sau3AI	GATC	7 cut(s)	447, 624, 762, 794, 944, 1014, 1042
Sau96I	GGNCC	1 cut(s)	1055
ScaI	AGTACT	1 cut(s)	650
SchI	GAGTC	1 cut(s)	82
ScrFI	CCNGG	1 cut(s)	410
SduI	GDGCHC	2 cut(s)	238, 847
SfaNI	GCATC	1 cut(s)	587
SfoI	GGCGCC	1 cut(s)	682
SinI	GGWCC	1 cut(s)	1055
SmiMI	CAYNNNNRTG	2 cut(s)	728, 734
SmlI	CTYRAG	3 cut(s)	80, 746, 766
SmoI	CTYRAG	3 cut(s)	80, 746, 766
SphI	GCATGC	1 cut(s)	1075
Sse9I	AATT	4 cut(s)	4, 117, 921, 960
SsiI	CCGC	2 cut(s)	660, 693
SspDI	GGCGCC	1 cut(s)	680
SspI	AATATT	1 cut(s)	213
SspMI	CTAG	2 cut(s)	365, 654
StyD4I	CCNGG	1 cut(s)	408
TaaI	ACNGT	4 cut(s)	110, 135, 955, 981
TaqI	TCGA	2 cut(s)	130, 208
TasI	AATT	4 cut(s)	4, 117, 921, 960
TatI	WGTACW	2 cut(s)	648, 969
TfiI	GAWTC	3 cut(s)	488, 742, 1049
Tru1I	TTAA	3 cut(s)	48, 81, 104
Tru9I	TTAA	3 cut(s)	48, 81, 104
TscAI	CASTG	1 cut(s)	238
TseFI	GTSAC	1 cut(s)	871
TseI	GCWGC	2 cut(s)	585, 857
Tsp45I	GTSAC	1 cut(s)	871
TspDTI	ATGAA	6 cut(s)	17, 217, 409, 519, 697, 930
TspRI	CASTG	1 cut(s)	238
Van91I	CCANNNNNTGG	1 cut(s)	1052
Vha464I	CTTAAG	1 cut(s)	80
VneI	GTGCAC	1 cut(s)	843
VpaK11BI	GGWCC	1 cut(s)	1055
XapI	RAATTY	1 cut(s)	921
XbaI	TCTAGA	1 cut(s)	364
XceI	RCATGY	2 cut(s)	970, 1075
XmiI	GTMKAC	1 cut(s)	333
XspI	CTAG	2 cut(s)	365, 654
ZrmI	AGTACT	1 cut(s)	650

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.