Rh1CG283100

WAT1-related protein

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1C
Physical Location & Seq
Reverse (-)
55457855 .. 55460131
2277 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1CG283100.1

Sequence Viewer

Length: 891 bp
ATGAACTTTTCTAGCAGAAAAAGCAGACCCGAACCTGCAGCTGGCATCATATGCCACCTTTTCTTTAGTGCTCTAATTGGGGTAACATTCACACAATACTTGTTTCTTCTTGGACTCCAATACACCTCAGCTACCTATTCCTGTGCATTCATCAACATGGTTCCTATGAACACTTTCCTATTGGCACTACCATTTGGTCTAGAGAAAGTAAACATTAGGAGCAAGGGAGGCAGAGCAAAGATCTTGGGTGCTCTGATATGTATTGGTGGAGCTTTGTCATTGACATTATACAAAGGAACGCCACTAACCAATCAACATTCCCATGCCACATCTCAAAACGAAGACCATGATTATATGAGGAGAGCAGCAAAGGATAAAGAGAAATGGGCAGTTGGTTCCCTGCTTTTAGCAGCAGGTTGCCTCTTGTGGGCTTCATGGTTTCTCATACAAGCAAAGATTGGCAAGAGCTACCCATTTCAGTACTCTAGCACAGCTATCTTGTCCTTCTTCGGTGCCATTCAATCAGCCATCTTGAGCTTGGTTACCGAGAGAAACATGAACATGTCAATGTGGGTTTTGAAGGGGAAGTTGGAGATATTAGGTGTCCTATATGCTGGAGCAATTGGATCAGGGTTGTGCTATGTAGGGATGTCATGGTGTGTGAAACAAAAGGGTCCATTGTTTACAGCAGCATTTACCCCCTTAACCCAGATTTTTGTGGCTATGTTTGACTTCTCAATCTTGAAAGAACAAATCTATCTTGGAAGTGTGGTGGGATCTGTCCTAGTCATAGTGGGAATGTATGTTCTACTGTGGGGGAAAAGCAATGATGCAAAGGAAACTGTGATGAAGCAGACACAAGCAGCTGAAGAAGGTGCGGATGTCCCTTGA

Protein Analysis

296

Amino Acids

32.32

Weight (kDa)

9.23

Isoelectric Point (pI)

34.02

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
EamA PF00892 9 - 91 6.3e-07 EamA-like transporter family
EamA PF00892 132 - 271 6.4e-12 EamA-like transporter family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0000665)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 43, 404
AccB1I GGYRCC 1 cut(s) 512
AciI CCGC 1 cut(s) 878
AclWI GGATC 2 cut(s) 634, 784
AcuI CTGAAG 1 cut(s) 888
AfaI GTAC 1 cut(s) 482
AfiI CCNNNNNNNGG 2 cut(s) 41, 427
AflIII ACRYGT 1 cut(s) 561
AgsI TTSAA 3 cut(s) 521, 580, 745
AjuI GAANNNNNNNTTGG 2 cut(s) 572, 604
AloI GAACNNNNNNTCC 2 cut(s) 789, 821
AluBI AGCT 7 cut(s) 41, 131, 272, 468, 494, 537, 866
AluI AGCT 7 cut(s) 41, 131, 272, 468, 494, 537, 866
Alw21I GWGCWC 2 cut(s) 73, 253
AlwI GGATC 2 cut(s) 634, 784
ApeKI GCWGC 5 cut(s) 38, 365, 410, 689, 863
Asp700I GAANNNNTTC 1 cut(s) 173
AspS9I GGNCC 1 cut(s) 674
AvaII GGWCC 1 cut(s) 674
BanI GGYRCC 1 cut(s) 512
BbsI GAAGAC 1 cut(s) 348
Bbv12I GWGCWC 2 cut(s) 73, 253
BbvCI CCTCAGC 1 cut(s) 127
BbvI GCAGC 5 cut(s) 50, 377, 422, 701, 875
BccI CCATC 1 cut(s) 536
BfaI CTAG 4 cut(s) 12, 200, 486, 785
BfmI CTRYAG 1 cut(s) 36
BfuAI ACCTGC 2 cut(s) 43, 404
BglII AGATCT 1 cut(s) 240
BisI GCNGC 5 cut(s) 39, 366, 411, 690, 864
BlsI GCNGC 5 cut(s) 40, 367, 412, 691, 865
BmcAI AGTACT 1 cut(s) 482
Bme18I GGWCC 1 cut(s) 674
BmgT120I GGNCC 1 cut(s) 674
BmiI GGNNCC 4 cut(s) 162, 397, 514, 675
BmsI GCATC 2 cut(s) 54, 820
BpiI GAAGAC 1 cut(s) 348
BpmI CTGGAG 1 cut(s) 636
Bpu10I CCTNAGC 1 cut(s) 127
BpuEI CTTGAG 1 cut(s) 553
Bsc4I CCNNNNNNNGG 2 cut(s) 41, 427
Bse3DI GCAATG 1 cut(s) 832
BseGI GGATG 2 cut(s) 654, 886
BseLI CCNNNNNNNGG 2 cut(s) 41, 427
BseMI GCAATG 1 cut(s) 832
BseMII CTCAG 1 cut(s) 141
BseRI GAGGAG 1 cut(s) 373
BseXI GCAGC 5 cut(s) 50, 377, 422, 701, 875
BshNI GGYRCC 1 cut(s) 512
BsiHKAI GWGCWC 2 cut(s) 73, 253
BslFI GGGAC 1 cut(s) 869
BslI CCNNNNNNNGG 2 cut(s) 41, 427
BsmFI GGGAC 1 cut(s) 869
BsmI GAATGC 1 cut(s) 146
Bsp1286I GDGCHC 2 cut(s) 73, 253
Bsp143I GATC 3 cut(s) 240, 626, 776
BspACI CCGC 1 cut(s) 878
BspCNI CTCAG 1 cut(s) 140
BspLI GGNNCC 4 cut(s) 162, 397, 514, 675
BspMAI CTGCAG 1 cut(s) 40
BspMI ACCTGC 2 cut(s) 43, 404
BspPI GGATC 2 cut(s) 634, 784
BspT107I GGYRCC 1 cut(s) 512
BsrDI GCAATG 1 cut(s) 832
BssMI GATC 3 cut(s) 240, 626, 776
Bst4CI ACNGT 2 cut(s) 813, 844
BstAPI GCANNNNNTGC 1 cut(s) 51
BstC8I GCNNGC 1 cut(s) 43
BstDEI CTNAG 1 cut(s) 127
BstEII GGTNACC 1 cut(s) 541
BstF5I GGATG 2 cut(s) 654, 886
BstKTI GATC 3 cut(s) 243, 629, 779
BstMBI GATC 3 cut(s) 240, 626, 776
BstMWI GCNNNNNNNGC 3 cut(s) 21, 51, 228
BstNSI RCATGY 1 cut(s) 565
BstPI GGTNACC 1 cut(s) 541
BstSFI CTRYAG 1 cut(s) 36
BstV1I GCAGC 5 cut(s) 50, 377, 422, 701, 875
BstV2I GAAGAC 1 cut(s) 348
BstX2I RGATCY 2 cut(s) 240, 776
BstYI RGATCY 2 cut(s) 240, 776
BtsCI GGATG 2 cut(s) 654, 886
BveI ACCTGC 2 cut(s) 43, 404
Cac8I GCNNGC 1 cut(s) 43
Cfr13I GGNCC 1 cut(s) 674
Csp6I GTAC 1 cut(s) 481
CviAII CATG 7 cut(s) 157, 323, 347, 435, 556, 562, 654
CviQI GTAC 1 cut(s) 481
DdeI CTNAG 1 cut(s) 127
DpnI GATC 3 cut(s) 242, 628, 778
DpnII GATC 3 cut(s) 240, 626, 776
Eco47I GGWCC 1 cut(s) 674
Eco57I CTGAAG 1 cut(s) 888
Eco91I GGTNACC 1 cut(s) 541
EcoO65I GGTNACC 1 cut(s) 541
FaeI CATG 7 cut(s) 160, 326, 350, 438, 559, 565, 657
FaqI GGGAC 1 cut(s) 869
FatI CATG 7 cut(s) 156, 322, 346, 434, 555, 561, 653
FauNDI CATATG 1 cut(s) 50
Fnu4HI GCNGC 5 cut(s) 39, 366, 411, 690, 864
FokI GGATG 1 cut(s) 661
Fsp4HI GCNGC 5 cut(s) 39, 366, 411, 690, 864
FspBI CTAG 4 cut(s) 12, 200, 486, 785
GluI GCNGC 5 cut(s) 39, 366, 411, 690, 864
GsuI CTGGAG 1 cut(s) 636
Hin1II CATG 7 cut(s) 160, 326, 350, 438, 559, 565, 657
HinfI GANTC 1 cut(s) 114
Hpy166II GTNNAC 2 cut(s) 211, 684
Hpy188I TCNGA 1 cut(s) 255
Hpy188III TCNNGA 3 cut(s) 200, 532, 742
Hpy8I GTNNAC 2 cut(s) 211, 684
HpyAV CCTTC 3 cut(s) 514, 574, 866
HpyCH4III ACNGT 2 cut(s) 813, 844
HpyCH4V TGCA 3 cut(s) 38, 146, 833
HpyF10VI GCNNNNNNNGC 3 cut(s) 21, 51, 228
HpyF3I CTNAG 1 cut(s) 127
Hsp92II CATG 7 cut(s) 160, 326, 350, 438, 559, 565, 657
Kzo9I GATC 3 cut(s) 240, 626, 776
LmnI GCTCC 3 cut(s) 219, 269, 617
LpnPI CCDG 8 cut(s) 27, 48, 154, 399, 413, 600, 615, 722
Lsp1109I GCAGC 5 cut(s) 50, 377, 422, 701, 875
LweI GCATC 2 cut(s) 54, 820
MaeI CTAG 4 cut(s) 12, 200, 486, 785
MaeIII GTNAC 2 cut(s) 82, 541
MalI GATC 3 cut(s) 242, 628, 778
MboI GATC 3 cut(s) 240, 626, 776
MboII GAAGA 4 cut(s) 98, 353, 499, 881
MfeI CAATTG 1 cut(s) 621
MflI RGATCY 2 cut(s) 240, 776
MhlI GDGCHC 2 cut(s) 73, 253
MluCI AATT 2 cut(s) 75, 621
MlyI GAGTC 1 cut(s) 108
MmeI TCCRAC 1 cut(s) 570
MnlI CCTC 4 cut(s) 136, 221, 351, 431
MroXI GAANNNNTTC 1 cut(s) 173
MseI TTAA 1 cut(s) 704
MslI CAYNNNNRTG 4 cut(s) 155, 321, 560, 566
MspA1I CMGCKG 2 cut(s) 41, 866
MunI CAATTG 1 cut(s) 621
Mva1269I GAATGC 1 cut(s) 146
MwoI GCNNNNNNNGC 3 cut(s) 21, 51, 228
NdeI CATATG 1 cut(s) 50
NdeII GATC 3 cut(s) 240, 626, 776
NlaIII CATG 7 cut(s) 160, 326, 350, 438, 559, 565, 657
NlaIV GGNNCC 4 cut(s) 162, 397, 514, 675
NspI RCATGY 1 cut(s) 565
PciI ACATGT 1 cut(s) 561
PctI GAATGC 1 cut(s) 146
PdmI GAANNNNTTC 1 cut(s) 173
PkrI GCNGC 5 cut(s) 40, 367, 412, 691, 865
PleI GAGTC 1 cut(s) 108
PpsI GAGTC 1 cut(s) 108
PscI ACATGT 1 cut(s) 561
PspEI GGTNACC 1 cut(s) 541
PspN4I GGNNCC 4 cut(s) 162, 397, 514, 675
PspPI GGNCC 1 cut(s) 674
PstI CTGCAG 1 cut(s) 40
PsuI RGATCY 2 cut(s) 240, 776
PvuII CAGCTG 2 cut(s) 41, 866
RsaI GTAC 1 cut(s) 482
RsaNI GTAC 1 cut(s) 481
RseI CAYNNNNRTG 4 cut(s) 155, 321, 560, 566
SaqAI TTAA 1 cut(s) 704
SatI GCNGC 5 cut(s) 39, 366, 411, 690, 864
Sau3AI GATC 3 cut(s) 240, 626, 776
Sau96I GGNCC 1 cut(s) 674
ScaI AGTACT 1 cut(s) 482
SchI GAGTC 1 cut(s) 108
SduI GDGCHC 2 cut(s) 73, 253
SfaNI GCATC 2 cut(s) 54, 820
SfcI CTRYAG 1 cut(s) 36
SinI GGWCC 1 cut(s) 674
SmiMI CAYNNNNRTG 4 cut(s) 155, 321, 560, 566
SmlI CTYRAG 1 cut(s) 532
SmoI CTYRAG 1 cut(s) 532
Sse9I AATT 2 cut(s) 75, 621
SsiI CCGC 1 cut(s) 878
SspMI CTAG 4 cut(s) 12, 200, 486, 785
TaaI ACNGT 2 cut(s) 813, 844
TasI AATT 2 cut(s) 75, 621
TatI WGTACW 1 cut(s) 480
Tru1I TTAA 1 cut(s) 704
Tru9I TTAA 1 cut(s) 704
TseI GCWGC 5 cut(s) 38, 365, 410, 689, 863
TspDTI ATGAA 6 cut(s) 17, 139, 182, 423, 572, 863
VpaK11BI GGWCC 1 cut(s) 674
XbaI TCTAGA 1 cut(s) 199
XceI RCATGY 1 cut(s) 565
XcmI CCANNNNNNNNNTGG 1 cut(s) 535
XmnI GAANNNNTTC 1 cut(s) 173
XspI CTAG 4 cut(s) 12, 200, 486, 785
ZrmI AGTACT 1 cut(s) 482
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.