Rh1BG264700

WAT1-related protein

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1B
Physical Location & Seq
Reverse (-)
39897874 .. 39900719
2846 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1BG264700.1

Sequence Viewer

Length: 1044 bp
ATGGTGAATTTCTATGGACAATGGAAGCCAGTGGTTGCCATGATTGGCATCAACCTTGCTTTGGCCATAGTCAACGTGCTTCTTAAGTTAACTCTGGATAAGGGAGTGCACAATTTGGTTGTAGTTACTTATAGACAGTCAATTTCTTGTGTCTTCTTGACACCCATTGCCTTCTTTTGGGAAAGAAAAAGTAGACATGAACTTACAGCTCCACTCATATGCCACCTTTTTTTCAGTGCTCTAATTGGGGTAACATTCGCACAATACATGTTTCTTCTTGGACTCCAGTACACCTCAGCTACATATTCTTCTGCCTTCATCAACATGGTGCCTGTTAACACTTACCTGTTGGCACTACCATTTGGTCTAGAGACAGTGAGCATTAGGAGCAAGGGAGGCAGAGCTAAGATATTGGGTGCTTTGATATGCATTGGTGGAGCTTTGTCATTGACCTTATACAAAGGAATGCCACTGACCAACCAACACTCACATGCCACAGCTGAAATTGAAAACCATGACTATATACTGAGTGCAGAAAAGAAGAGAGTGAGGTGGGCACTTGGTTCAGTGTTTTTGGCAGCAGGTTGCATGTTGTGGGCTTCATGGTTTCTCATACAAGCCAAGATTGGGAAGAGCTACCCATTTCAATACTCTAGCACAGCCATCTTGTCCTTCTTTGGTGTCATTCAGTCAGCCATCTTGACCTTGCTTACTGAGAGAAGCATCAACATGTCAATGTGGGTTTTGAAGGGGAAGTTGGAGATACTGAGTGTCACATATGCTGGAGCAGTTGGATCAGGGTTGACCTATGTAGGCATGTCATGGTGTGTGAAGCAAAAGGGTCCATTGTTTACATCAGCATTCACTCCCTTAATCCAGATATTTGTGGCTATGTTTGACTTCTTAACCTTGCATGAACAGATCTATGTTGGAAGGTTGGCTCAATTATATGTTCAGATATTGATCATGCTTTCACCTCCAATATGTGATATGTTATGTTGTAAATTGTTAATCCATGCAACATGTTTAAAAAAAAAAAAATAG

Protein Analysis

347

Amino Acids

38.57

Weight (kDa)

9.5

Isoelectric Point (pI)

37.03

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
EamA PF00892 11 - 148 2.3e-10 EamA-like transporter family
EamA PF00892 188 - 312 1.7e-06 EamA-like transporter family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0000665)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 572
AccB1I GGYRCC 1 cut(s) 328
AccI GTMKAC 1 cut(s) 193
AclWI GGATC 1 cut(s) 802
AcoI YGGCCR 1 cut(s) 63
AcsI RAATTY 1 cut(s) 7
AfaI GTAC 1 cut(s) 290
AfiI CCNNNNNNNGG 3 cut(s) 61, 177, 627
AflII CTTAAG 1 cut(s) 83
AflIII ACRYGT 3 cut(s) 267, 729, 1022
AgsI TTSAA 3 cut(s) 509, 647, 748
AjuI GAANNNNNNNTTGG 2 cut(s) 740, 772
AluBI AGCT 6 cut(s) 209, 299, 404, 440, 500, 636
AluI AGCT 6 cut(s) 209, 299, 404, 440, 500, 636
Alw21I GWGCWC 2 cut(s) 111, 241
Alw26I GTCTC 1 cut(s) 365
Alw44I GTGCAC 1 cut(s) 107
AlwI GGATC 1 cut(s) 802
AoxI GGCC 1 cut(s) 63
ApaLI GTGCAC 1 cut(s) 107
ApeKI GCWGC 1 cut(s) 578
ApoI RAATTY 1 cut(s) 7
AspS9I GGNCC 1 cut(s) 842
AsuHPI GGTGA 2 cut(s) 16, 966
AvaII GGWCC 1 cut(s) 842
BaeGI GKGCMC 2 cut(s) 111, 559
BalI TGGCCA 1 cut(s) 65
BanI GGYRCC 1 cut(s) 328
BbsI GAAGAC 1 cut(s) 145
Bbv12I GWGCWC 2 cut(s) 111, 241
BbvCI CCTCAGC 1 cut(s) 295
BbvI GCAGC 1 cut(s) 590
BccI CCATC 2 cut(s) 671, 704
BclI TGATCA 1 cut(s) 963
BcoDI GTCTC 1 cut(s) 365
BfaI CTAG 2 cut(s) 368, 654
BfrI CTTAAG 1 cut(s) 83
BfuAI ACCTGC 1 cut(s) 572
BglII AGATCT 1 cut(s) 921
BisI GCNGC 1 cut(s) 579
BlsI GCNGC 1 cut(s) 580
Bme18I GGWCC 1 cut(s) 842
BmgT120I GGNCC 1 cut(s) 842
BmiI GGNNCC 2 cut(s) 330, 843
BmsI GCATC 2 cut(s) 57, 732
BpiI GAAGAC 1 cut(s) 145
BpmI CTGGAG 2 cut(s) 269, 804
Bpu10I CCTNAGC 1 cut(s) 295
BsaBI GATNNNNATC 2 cut(s) 47, 962
Bsc4I CCNNNNNNNGG 3 cut(s) 61, 177, 627
Bse1I ACTGG 2 cut(s) 29, 286
Bse3DI GCAATG 1 cut(s) 165
Bse8I GATNNNNATC 2 cut(s) 47, 962
BseJI GATNNNNATC 2 cut(s) 47, 962
BseLI CCNNNNNNNGG 3 cut(s) 61, 177, 627
BseMI GCAATG 1 cut(s) 165
BseMII CTCAG 4 cut(s) 309, 518, 705, 758
BseNI ACTGG 2 cut(s) 29, 286
BseSI GKGCMC 2 cut(s) 111, 559
BseXI GCAGC 1 cut(s) 590
BsgI GTGCAG 1 cut(s) 552
BshFI GGCC 1 cut(s) 65
BshNI GGYRCC 1 cut(s) 328
BsiHKAI GWGCWC 2 cut(s) 111, 241
BslI CCNNNNNNNGG 3 cut(s) 61, 177, 627
BsmAI GTCTC 1 cut(s) 365
BsmI GAATGC 2 cut(s) 471, 860
BsnI GGCC 1 cut(s) 65
Bsp1286I GDGCHC 3 cut(s) 111, 241, 559
Bsp143I GATC 3 cut(s) 794, 921, 963
BspANI GGCC 1 cut(s) 65
BspCNI CTCAG 4 cut(s) 308, 519, 706, 759
BspLI GGNNCC 2 cut(s) 330, 843
BspMI ACCTGC 1 cut(s) 572
BspPI GGATC 1 cut(s) 802
BspQI GCTCTTC 1 cut(s) 626
BspT107I GGYRCC 1 cut(s) 328
BspTI CTTAAG 1 cut(s) 83
BsrDI GCAATG 1 cut(s) 165
BsrI ACTGG 2 cut(s) 29, 286
BssMI GATC 3 cut(s) 794, 921, 963
Bst4CI ACNGT 2 cut(s) 138, 376
Bst6I CTCTTC 2 cut(s) 536, 626
BstAFI CTTAAG 1 cut(s) 83
BstDEI CTNAG 5 cut(s) 295, 405, 527, 714, 767
BstKTI GATC 3 cut(s) 797, 924, 966
BstMAI GTCTC 1 cut(s) 365
BstMBI GATC 3 cut(s) 794, 921, 963
BstMWI GCNNNNNNNGC 2 cut(s) 387, 396
BstNSI RCATGY 6 cut(s) 271, 494, 592, 733, 820, 1026
BstSLI GKGCMC 2 cut(s) 111, 559
BstV1I GCAGC 1 cut(s) 590
BstV2I GAAGAC 1 cut(s) 145
BstX2I RGATCY 1 cut(s) 921
BstYI RGATCY 1 cut(s) 921
BsuRI GGCC 1 cut(s) 65
BtsIMutI CAGTG 5 cut(s) 36, 241, 381, 470, 573
BveI ACCTGC 1 cut(s) 572
Cfr13I GGNCC 1 cut(s) 842
Csp6I GTAC 1 cut(s) 289
CviQI GTAC 1 cut(s) 289
DdeI CTNAG 5 cut(s) 295, 405, 527, 714, 767
DpnI GATC 3 cut(s) 796, 923, 965
DpnII GATC 3 cut(s) 794, 921, 963
DraI TTTAAA 1 cut(s) 1029
EaeI YGGCCR 1 cut(s) 63
Eam1104I CTCTTC 2 cut(s) 536, 626
EarI CTCTTC 2 cut(s) 536, 626
Eco47I GGWCC 1 cut(s) 842
EcoT22I ATGCAT 1 cut(s) 431
FauNDI CATATG 2 cut(s) 218, 778
FbaI TGATCA 1 cut(s) 963
FblI GTMKAC 1 cut(s) 193
Fnu4HI GCNGC 1 cut(s) 579
Fsp4HI GCNGC 1 cut(s) 579
FspBI CTAG 2 cut(s) 368, 654
GluI GCNGC 1 cut(s) 579
GsuI CTGGAG 2 cut(s) 269, 804
HaeIII GGCC 1 cut(s) 65
HincII GTYRAC 4 cut(s) 73, 90, 337, 804
HindII GTYRAC 4 cut(s) 73, 90, 337, 804
HinfI GANTC 1 cut(s) 282
HpaI GTTAAC 2 cut(s) 90, 337
HphI GGTGA 2 cut(s) 16, 966
Hpy166II GTNNAC 8 cut(s) 73, 90, 109, 194, 291, 337, 804, 852
Hpy188I TCNGA 1 cut(s) 957
Hpy188III TCNNGA 5 cut(s) 95, 157, 368, 700, 877
Hpy8I GTNNAC 8 cut(s) 73, 90, 109, 194, 291, 337, 804, 852
HpyAV CCTTC 5 cut(s) 181, 325, 682, 742, 927
HpyCH4III ACNGT 2 cut(s) 138, 376
HpyCH4IV ACGT 1 cut(s) 75
HpyCH4V TGCA 6 cut(s) 109, 429, 533, 588, 913, 1019
HpyF10VI GCNNNNNNNGC 2 cut(s) 387, 396
HpyF3I CTNAG 5 cut(s) 295, 405, 527, 714, 767
HpySE526I ACGT 1 cut(s) 75
Ksp22I TGATCA 1 cut(s) 963
KspAI GTTAAC 2 cut(s) 90, 337
Kzo9I GATC 3 cut(s) 794, 921, 963
LguI GCTCTTC 1 cut(s) 626
LmnI GCTCC 4 cut(s) 214, 387, 437, 785
LpnPI CCDG 9 cut(s) 42, 80, 299, 345, 359, 567, 768, 783, 890
Lsp1109I GCAGC 1 cut(s) 590
LweI GCATC 2 cut(s) 57, 732
MaeI CTAG 2 cut(s) 368, 654
MaeII ACGT 1 cut(s) 75
MaeIII GTNAC 3 cut(s) 124, 250, 772
MalI GATC 3 cut(s) 796, 923, 965
MboI GATC 3 cut(s) 794, 921, 963
MboII GAAGA 5 cut(s) 145, 266, 300, 553, 643
MflI RGATCY 1 cut(s) 921
MhlI GDGCHC 3 cut(s) 111, 241, 559
MlsI TGGCCA 1 cut(s) 65
MluCI AATT 7 cut(s) 7, 112, 141, 243, 504, 944, 1004
MluNI TGGCCA 1 cut(s) 65
MlyI GAGTC 1 cut(s) 276
MmeI TCCRAC 3 cut(s) 738, 772, 910
MnlI CCTC 4 cut(s) 304, 389, 543, 987
Mox20I TGGCCA 1 cut(s) 65
Mph1103I ATGCAT 1 cut(s) 431
MscI TGGCCA 1 cut(s) 65
MseI TTAA 7 cut(s) 84, 89, 336, 872, 905, 1010, 1028
MslI CAYNNNNRTG 5 cut(s) 217, 323, 489, 728, 734
Msp20I TGGCCA 1 cut(s) 65
MspA1I CMGCKG 1 cut(s) 500
MspCI CTTAAG 1 cut(s) 83
Mva1269I GAATGC 2 cut(s) 471, 860
MwoI GCNNNNNNNGC 2 cut(s) 387, 396
NdeI CATATG 2 cut(s) 218, 778
NdeII GATC 3 cut(s) 794, 921, 963
NlaIV GGNNCC 2 cut(s) 330, 843
NmuCI GTSAC 1 cut(s) 772
NsiI ATGCAT 1 cut(s) 431
NspI RCATGY 6 cut(s) 271, 494, 592, 733, 820, 1026
PciI ACATGT 3 cut(s) 267, 729, 1022
PciSI GCTCTTC 1 cut(s) 626
PctI GAATGC 2 cut(s) 471, 860
PkrI GCNGC 1 cut(s) 580
PleI GAGTC 1 cut(s) 276
PpsI GAGTC 1 cut(s) 276
PscI ACATGT 3 cut(s) 267, 729, 1022
PspN4I GGNNCC 2 cut(s) 330, 843
PspPI GGNCC 1 cut(s) 842
PsuI RGATCY 1 cut(s) 921
PvuII CAGCTG 1 cut(s) 500
RsaI GTAC 1 cut(s) 290
RsaNI GTAC 1 cut(s) 289
RseI CAYNNNNRTG 5 cut(s) 217, 323, 489, 728, 734
SapI GCTCTTC 1 cut(s) 626
SaqAI TTAA 7 cut(s) 84, 89, 336, 872, 905, 1010, 1028
SatI GCNGC 1 cut(s) 579
Sau3AI GATC 3 cut(s) 794, 921, 963
Sau96I GGNCC 1 cut(s) 842
SchI GAGTC 1 cut(s) 276
SduI GDGCHC 3 cut(s) 111, 241, 559
SfaNI GCATC 2 cut(s) 57, 732
SinI GGWCC 1 cut(s) 842
SmiMI CAYNNNNRTG 5 cut(s) 217, 323, 489, 728, 734
SmlI CTYRAG 1 cut(s) 83
SmoI CTYRAG 1 cut(s) 83
Sse9I AATT 7 cut(s) 7, 112, 141, 243, 504, 944, 1004
SspMI CTAG 2 cut(s) 368, 654
TaaI ACNGT 2 cut(s) 138, 376
TaiI ACGT 1 cut(s) 78
TasI AATT 7 cut(s) 7, 112, 141, 243, 504, 944, 1004
TatI WGTACW 1 cut(s) 288
Tru1I TTAA 7 cut(s) 84, 89, 336, 872, 905, 1010, 1028
Tru9I TTAA 7 cut(s) 84, 89, 336, 872, 905, 1010, 1028
TscAI CASTG 5 cut(s) 36, 241, 381, 477, 573
TseFI GTSAC 1 cut(s) 772
TseI GCWGC 1 cut(s) 578
Tsp45I GTSAC 1 cut(s) 772
TspDTI ATGAA 4 cut(s) 213, 307, 591, 930
TspRI CASTG 5 cut(s) 36, 241, 381, 477, 573
Vha464I CTTAAG 1 cut(s) 83
VneI GTGCAC 1 cut(s) 107
VpaK11BI GGWCC 1 cut(s) 842
XapI RAATTY 1 cut(s) 7
XbaI TCTAGA 1 cut(s) 367
XceI RCATGY 6 cut(s) 271, 494, 592, 733, 820, 1026
XmiI GTMKAC 1 cut(s) 193
XspI CTAG 2 cut(s) 368, 654
Zsp2I ATGCAT 1 cut(s) 431
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.