RLG00000027704

WAT1-related protein

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
Physical Location & Seq
Forward (+)
14171993 .. 14174167
2175 bp
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UTR
Exon/CDS
Intron
RLM00000027704

Sequence Viewer

Length: 1059 bp
ATGGTGAATTACAGAGAATGGATGCCTACTGTTGCCATGGTTGCCATAAACCTAGCTTTTGCAGGAGTCAATGTGCTTCTTAAGTTGACATTGGATAAAGGAGTACACAATTTGGTGGTTGTTACTTATCGGCAGTCGATTTCTTGTGTCTTATTGACACCTATTGCCTTCTTTTGGGAAAGAAAAAGCAGACCCGAACTTACAGCTCACATCATATGCCACCTTTTCATCAGTGCTCTAATTGGGGTAACATTCACACAATACTTGTTTCTTCTTGGACTCCAATACACCTCAGCTACCTATTCCTGTGCATTCATCAACATGGTTCCTGTGAACACTTTCCTATTGGCACTACCATTTGGTCTAGAGAAAGTGAACATTAGGAGCAAGGGAGGCAGAGCAAAGATCTTGGGTGCTCTGATATGTATTGGTGGAGCTTTGTCATTGACCTTATACAAAGGAATGCCACTAACCAACCAACATTCCCATGCCACAGCTGATCAAAATGAAGACTATGACTATATGAGGAGATTAGCAAAGGATAAAGAGAAGTGGGCAGTTGGTTCACTGCTTTTAGCAGCAGGTTGCCTATTGTGGGCTTCATGGTTTCTCATACAAGCCAAGATTGGCAAGAGCTACCCATTTCAGTACTCTAGCACAGCTATCTTGTCCTTCTTCGGTGCCATTCAATCAGCCATCTTGAGCTTGGTTACCGAGAGAAACATGAACATGTCAATGTGGGTTTTGAAGGGGAAGTTAGAGATATTAAGTGTCCTATATGCTGGAGCAATTGGATCAGGGTTGTGCTATGTAGGGATGTCATGGTGTGTGAAACAAAAGGGTCCATTGTTTACAGCAGCATTTACCCCCTTAACCCAGATTTTTGTGGCTATGTTTGACTTCTCAACCTTGAAAGAACAAATCTATCTTGGAAGTGTGGTGGGATCTGTCCTAGTCATAGTGGGAATGTATGTTCTACTGTGGGGGAAAAGCAATGATGCAAAGGAAACTGTGATGAAGCAGACACAAGCAGCTGAAGAAGGTGCAGATGTCCGTTGA

Protein Analysis

353

Amino Acids

38.87

Weight (kDa)

9.2

Isoelectric Point (pI)

33.24

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
EamA PF00892 12 - 146 7.3e-11 EamA-like transporter family
EamA PF00892 188 - 327 1.5e-11 EamA-like transporter family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0000665)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 572
AccB1I GGYRCC 1 cut(s) 680
AclWI GGATC 2 cut(s) 802, 952
AcuI CTGAAG 1 cut(s) 1056
AfaI GTAC 2 cut(s) 105, 650
AfiI CCNNNNNNNGG 2 cut(s) 174, 595
AflII CTTAAG 1 cut(s) 80
AflIII ACRYGT 1 cut(s) 729
AgsI TTSAA 3 cut(s) 689, 748, 913
AloI GAACNNNNNNTCC 2 cut(s) 957, 989
AluBI AGCT 9 cut(s) 56, 206, 296, 437, 497, 636, 662, 705, 1034
AluI AGCT 9 cut(s) 56, 206, 296, 437, 497, 636, 662, 705, 1034
Alw21I GWGCWC 2 cut(s) 238, 418
AlwI GGATC 2 cut(s) 802, 952
ApeKI GCWGC 3 cut(s) 578, 857, 1031
Asp700I GAANNNNTTC 1 cut(s) 338
AspS9I GGNCC 1 cut(s) 842
AsuHPI GGTGA 1 cut(s) 16
AvaII GGWCC 1 cut(s) 842
BanI GGYRCC 1 cut(s) 680
BbsI GAAGAC 1 cut(s) 516
Bbv12I GWGCWC 2 cut(s) 238, 418
BbvCI CCTCAGC 1 cut(s) 292
BbvI GCAGC 3 cut(s) 590, 869, 1043
BccI CCATC 1 cut(s) 704
BclI TGATCA 1 cut(s) 499
BfaI CTAG 4 cut(s) 53, 365, 654, 953
BfrI CTTAAG 1 cut(s) 80
BfuAI ACCTGC 1 cut(s) 572
BglII AGATCT 1 cut(s) 405
BisI GCNGC 3 cut(s) 579, 858, 1032
BlsI GCNGC 3 cut(s) 580, 859, 1033
BmcAI AGTACT 1 cut(s) 650
Bme18I GGWCC 1 cut(s) 842
BmgT120I GGNCC 1 cut(s) 842
BmiI GGNNCC 3 cut(s) 327, 682, 843
BmsI GCATC 2 cut(s) 12, 988
BpiI GAAGAC 1 cut(s) 516
BpmI CTGGAG 1 cut(s) 804
Bpu10I CCTNAGC 1 cut(s) 292
BpuEI CTTGAG 1 cut(s) 721
BsaJI CCNNGG 1 cut(s) 36
BsaXI ACNNNNNCTCC 2 cut(s) 57, 87
Bsc4I CCNNNNNNNGG 2 cut(s) 174, 595
Bse3DI GCAATG 1 cut(s) 1000
BseDI CCNNGG 1 cut(s) 36
BseGI GGATG 2 cut(s) 27, 822
BseLI CCNNNNNNNGG 2 cut(s) 174, 595
BseMI GCAATG 1 cut(s) 1000
BseMII CTCAG 1 cut(s) 306
BseRI GAGGAG 1 cut(s) 541
BseXI GCAGC 3 cut(s) 590, 869, 1043
BshNI GGYRCC 1 cut(s) 680
BsiHKAI GWGCWC 2 cut(s) 238, 418
BslI CCNNNNNNNGG 2 cut(s) 174, 595
BsmI GAATGC 2 cut(s) 311, 468
Bsp1286I GDGCHC 2 cut(s) 238, 418
Bsp143I GATC 4 cut(s) 405, 499, 794, 944
Bsp19I CCATGG 1 cut(s) 36
BspCNI CTCAG 1 cut(s) 305
BspLI GGNNCC 3 cut(s) 327, 682, 843
BspMI ACCTGC 1 cut(s) 572
BspPI GGATC 2 cut(s) 802, 952
BspT107I GGYRCC 1 cut(s) 680
BspTI CTTAAG 1 cut(s) 80
BsrDI GCAATG 1 cut(s) 1000
BssECI CCNNGG 1 cut(s) 36
BssMI GATC 4 cut(s) 405, 499, 794, 944
BssT1I CCWWGG 1 cut(s) 36
Bst4CI ACNGT 3 cut(s) 31, 981, 1012
BstAFI CTTAAG 1 cut(s) 80
BstDEI CTNAG 1 cut(s) 292
BstDSI CCRYGG 1 cut(s) 36
BstEII GGTNACC 1 cut(s) 709
BstF5I GGATG 2 cut(s) 27, 822
BstKTI GATC 4 cut(s) 408, 502, 797, 947
BstMBI GATC 4 cut(s) 405, 499, 794, 944
BstMWI GCNNNNNNNGC 2 cut(s) 41, 393
BstNSI RCATGY 1 cut(s) 733
BstPI GGTNACC 1 cut(s) 709
BstV1I GCAGC 3 cut(s) 590, 869, 1043
BstV2I GAAGAC 1 cut(s) 516
BstX2I RGATCY 2 cut(s) 405, 944
BstYI RGATCY 2 cut(s) 405, 944
BtgI CCRYGG 1 cut(s) 36
BtsCI GGATG 2 cut(s) 27, 822
BtsI GCAGTG 1 cut(s) 566
BtsIMutI CAGTG 2 cut(s) 238, 566
BveI ACCTGC 1 cut(s) 572
Cfr13I GGNCC 1 cut(s) 842
Csp6I GTAC 2 cut(s) 104, 649
CviAII CATG 7 cut(s) 37, 322, 488, 603, 724, 730, 822
CviQI GTAC 2 cut(s) 104, 649
DdeI CTNAG 1 cut(s) 292
DpnI GATC 4 cut(s) 407, 501, 796, 946
DpnII GATC 4 cut(s) 405, 499, 794, 944
Eco130I CCWWGG 1 cut(s) 36
Eco47I GGWCC 1 cut(s) 842
Eco57I CTGAAG 1 cut(s) 1056
Eco91I GGTNACC 1 cut(s) 709
EcoO65I GGTNACC 1 cut(s) 709
EcoT14I CCWWGG 1 cut(s) 36
ErhI CCWWGG 1 cut(s) 36
FaeI CATG 7 cut(s) 40, 325, 491, 606, 727, 733, 825
FatI CATG 7 cut(s) 36, 321, 487, 602, 723, 729, 821
FauNDI CATATG 1 cut(s) 215
FbaI TGATCA 1 cut(s) 499
Fnu4HI GCNGC 3 cut(s) 579, 858, 1032
FokI GGATG 2 cut(s) 34, 829
Fsp4HI GCNGC 3 cut(s) 579, 858, 1032
FspBI CTAG 4 cut(s) 53, 365, 654, 953
GluI GCNGC 3 cut(s) 579, 858, 1032
GsuI CTGGAG 1 cut(s) 804
Hin1II CATG 7 cut(s) 40, 325, 491, 606, 727, 733, 825
HincII GTYRAC 1 cut(s) 87
HindII GTYRAC 1 cut(s) 87
HinfI GANTC 2 cut(s) 66, 279
HphI GGTGA 1 cut(s) 16
Hpy166II GTNNAC 6 cut(s) 87, 106, 334, 376, 566, 852
Hpy188I TCNGA 1 cut(s) 420
Hpy188III TCNNGA 2 cut(s) 365, 700
Hpy8I GTNNAC 6 cut(s) 87, 106, 334, 376, 566, 852
HpyAV CCTTC 4 cut(s) 178, 682, 742, 1034
HpyCH4III ACNGT 3 cut(s) 31, 981, 1012
HpyCH4V TGCA 4 cut(s) 62, 311, 1001, 1046
HpyF10VI GCNNNNNNNGC 2 cut(s) 41, 393
HpyF3I CTNAG 1 cut(s) 292
Hsp92II CATG 7 cut(s) 40, 325, 491, 606, 727, 733, 825
Ksp22I TGATCA 1 cut(s) 499
Kzo9I GATC 4 cut(s) 405, 499, 794, 944
LmnI GCTCC 3 cut(s) 384, 434, 785
LpnPI CCDG 7 cut(s) 48, 319, 342, 567, 768, 783, 890
Lsp1109I GCAGC 3 cut(s) 590, 869, 1043
LweI GCATC 2 cut(s) 12, 988
MaeI CTAG 4 cut(s) 53, 365, 654, 953
MaeIII GTNAC 3 cut(s) 121, 247, 709
MalI GATC 4 cut(s) 407, 501, 796, 946
MboI GATC 4 cut(s) 405, 499, 794, 944
MboII GAAGA 4 cut(s) 263, 521, 667, 1049
MfeI CAATTG 1 cut(s) 789
MflI RGATCY 2 cut(s) 405, 944
MhlI GDGCHC 2 cut(s) 238, 418
MluCI AATT 4 cut(s) 7, 109, 240, 789
MlyI GAGTC 2 cut(s) 75, 273
MnlI CCTC 3 cut(s) 301, 386, 519
MroXI GAANNNNTTC 1 cut(s) 338
MseI TTAA 3 cut(s) 81, 767, 872
MslI CAYNNNNRTG 4 cut(s) 320, 486, 728, 734
MspA1I CMGCKG 2 cut(s) 497, 1034
MspCI CTTAAG 1 cut(s) 80
MunI CAATTG 1 cut(s) 789
Mva1269I GAATGC 2 cut(s) 311, 468
MwoI GCNNNNNNNGC 2 cut(s) 41, 393
NcoI CCATGG 1 cut(s) 36
NdeI CATATG 1 cut(s) 215
NdeII GATC 4 cut(s) 405, 499, 794, 944
NlaIII CATG 7 cut(s) 40, 325, 491, 606, 727, 733, 825
NlaIV GGNNCC 3 cut(s) 327, 682, 843
NspI RCATGY 1 cut(s) 733
PciI ACATGT 1 cut(s) 729
PctI GAATGC 2 cut(s) 311, 468
PdmI GAANNNNTTC 1 cut(s) 338
PkrI GCNGC 3 cut(s) 580, 859, 1033
PleI GAGTC 2 cut(s) 74, 273
PpsI GAGTC 2 cut(s) 74, 273
PscI ACATGT 1 cut(s) 729
PspEI GGTNACC 1 cut(s) 709
PspN4I GGNNCC 3 cut(s) 327, 682, 843
PspPI GGNCC 1 cut(s) 842
PsuI RGATCY 2 cut(s) 405, 944
PvuII CAGCTG 2 cut(s) 497, 1034
RsaI GTAC 2 cut(s) 105, 650
RsaNI GTAC 2 cut(s) 104, 649
RseI CAYNNNNRTG 4 cut(s) 320, 486, 728, 734
SaqAI TTAA 3 cut(s) 81, 767, 872
SatI GCNGC 3 cut(s) 579, 858, 1032
Sau3AI GATC 4 cut(s) 405, 499, 794, 944
Sau96I GGNCC 1 cut(s) 842
ScaI AGTACT 1 cut(s) 650
SchI GAGTC 2 cut(s) 75, 273
SduI GDGCHC 2 cut(s) 238, 418
SfaNI GCATC 2 cut(s) 12, 988
SinI GGWCC 1 cut(s) 842
SmiMI CAYNNNNRTG 4 cut(s) 320, 486, 728, 734
SmlI CTYRAG 2 cut(s) 80, 700
SmoI CTYRAG 2 cut(s) 80, 700
Sse9I AATT 4 cut(s) 7, 109, 240, 789
SspMI CTAG 4 cut(s) 53, 365, 654, 953
StyI CCWWGG 1 cut(s) 36
TaaI ACNGT 3 cut(s) 31, 981, 1012
TaqI TCGA 1 cut(s) 137
TasI AATT 4 cut(s) 7, 109, 240, 789
TatI WGTACW 2 cut(s) 103, 648
Tru1I TTAA 3 cut(s) 81, 767, 872
Tru9I TTAA 3 cut(s) 81, 767, 872
TscAI CASTG 2 cut(s) 238, 573
TseI GCWGC 3 cut(s) 578, 857, 1031
TspDTI ATGAA 6 cut(s) 217, 304, 522, 591, 740, 1031
TspGWI ACGGA 1 cut(s) 1043
TspRI CASTG 2 cut(s) 238, 573
Vha464I CTTAAG 1 cut(s) 80
VpaK11BI GGWCC 1 cut(s) 842
XbaI TCTAGA 1 cut(s) 364
XceI RCATGY 1 cut(s) 733
XcmI CCANNNNNNNNNTGG 1 cut(s) 703
XmnI GAANNNNTTC 1 cut(s) 338
XspI CTAG 4 cut(s) 53, 365, 654, 953
ZrmI AGTACT 1 cut(s) 650
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.