RchiOBHm_Chr7g0187931

WAT1-related protein

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
Physical Location & Seq
Reverse (-)
7635026 .. 7637225
2200 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ16779

Sequence Viewer

Length: 1128 bp
ATGGCCGGGGAGATGAAGGGATTCGACGAATGGAAGCCTTTCATTGCTATGGTAGCCATAGATTTTGCGTTTGCCATAGTGAATATTCTGCTCAAGAAAGTGCTTGATGAAGGAATGAACCATTTGGTTCTCATTACGTATCGGTTGACAATTTCGACCATCTTCTTGGCTCCAATTAGCTACTTTTGGGAAAGGAATAGTAGACCAAAACTCACACCAAGGATTGTATGTTACCTCTTCTTGAGTGCCATTGTTGGGTCATCCATAACACAGTACTTCTTTCTCCTTGGAATCCAATACACATCTGCTACTTTTGCTTGTGCCTTTGTCAACATGGTGCCTATGGTCACATTCATCATGGCAGTACCATTCGGGTTAGAGAAGGTGAACTTGAAATGCAATAGCGGTAGAGCCAAAGTACTCGGTACACTGGTGTGCTTATGTGGTGCAGCGATATTGACACTTTACAAAGGAGTTCCTTTGTTTGATCATTCGAAATCTACAAGTACTCAAATTACCATGATGGATCATGGTATCAAGCTGAGCAGCACCAGAAACAAAGGGAGATGGACTGTTGGTTCAATAGCTTTGGTTGCAGGAACACTGTTATGGTCTTCATGGTTTCTAGTGCAATCAAACATAGGCAAGCTATATCCATGTCAGTATTCCAGCACTACTATAATGAACTTCTTTGGTGCCATTCAGTCCGGAATCTTAGGTTTGTGCACTAGTAAGAACCTCTCCGTGTGGGTTCTGAAGGGAAAAGCACAAGTTCTCACTGTCATGTTTGCCGGGATGATAGCATCAGGCTTGGGCTTTGTGGGGATGTCATGGTGTGTGAAGAAAAGGGGACCTGTGTTTACTGCAGCATTTAGCCCCCTTGTTCAGATTATGGCAGCGGTGATCGGTATCCCCATGTTTCATGAACAACTCCACCTTGGAAGCTTGTTGGGGTCTATCATTGTGATAATTGGCTTGTATATTCTTCTTTGGGGAAAGAATAAAGAAATGCAGAAGTATATGGCAAAACTAGCCCAAGAAGCCGAAGCGATGAAGGAGCAGGAGCAACCTTCTCCTCCACCAGTCATCATCAGAGTCTCCGTAGATGATGATTCAAGGTGTCCATGA

Protein Analysis

375

Amino Acids

41.29

Weight (kDa)

9.4

Isoelectric Point (pI)

31.42

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
EamA PF00892 15 - 154 7.2e-15 EamA-like transporter family
EamA PF00892 193 - 330 6e-08 EamA-like transporter family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0000665)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 337, 695
AccI GTMKAC 1 cut(s) 202
AccIII TCCGGA 1 cut(s) 707
AciI CCGC 2 cut(s) 405, 899
AclWI GGATC 1 cut(s) 534
AcoI YGGCCR 1 cut(s) 3
AcuI CTGAAG 1 cut(s) 776
AfaI GTAC 5 cut(s) 275, 366, 420, 427, 508
AfiI CCNNNNNNNGG 1 cut(s) 255
AgsI TTSAA 3 cut(s) 394, 582, 1116
AhlI ACTAGT 1 cut(s) 728
AleI CACNNNNGTG 1 cut(s) 433
AloI GAACNNNNNNTCC 2 cut(s) 562, 594
AluBI AGCT 5 cut(s) 180, 541, 587, 649, 945
AluI AGCT 5 cut(s) 180, 541, 587, 649, 945
Alw21I GWGCWC 1 cut(s) 728
Alw26I GTCTC 1 cut(s) 1102
Alw44I GTGCAC 1 cut(s) 724
AlwI GGATC 1 cut(s) 534
Aor13HI TCCGGA 1 cut(s) 707
AoxI GGCC 1 cut(s) 3
ApaLI GTGCAC 1 cut(s) 724
ApeKI GCWGC 4 cut(s) 449, 546, 866, 896
Asp700I GAANNNNTTC 2 cut(s) 20, 38
AspS9I GGNCC 1 cut(s) 851
AsuC2I CCSGG 2 cut(s) 7, 793
AsuHPI GGTGA 2 cut(s) 397, 913
AsuII TTCGAA 1 cut(s) 494
AvaII GGWCC 1 cut(s) 851
BaeGI GKGCMC 1 cut(s) 728
BaeI ACNNNNGTAYC 2 cut(s) 417, 450
BanI GGYRCC 2 cut(s) 337, 695
BbsI GAAGAC 1 cut(s) 606
Bbv12I GWGCWC 1 cut(s) 728
BbvI GCAGC 4 cut(s) 461, 558, 878, 908
BccI CCATC 3 cut(s) 167, 517, 561
BciVI GTATCC 1 cut(s) 920
BclI TGATCA 1 cut(s) 487
BcnI CCSGG 2 cut(s) 7, 793
BcoDI GTCTC 1 cut(s) 1102
BcuI ACTAGT 1 cut(s) 728
BfaI CTAG 3 cut(s) 626, 729, 1031
BfmI CTRYAG 1 cut(s) 864
BfuI GTATCC 1 cut(s) 920
BisI GCNGC 4 cut(s) 450, 547, 867, 897
BlpI GCTNAGC 1 cut(s) 542
BlsI GCNGC 4 cut(s) 451, 548, 868, 898
BmcAI AGTACT 3 cut(s) 275, 420, 508
Bme1390I CCNGG 2 cut(s) 7, 793
Bme18I GGWCC 1 cut(s) 851
BmgT120I GGNCC 1 cut(s) 851
BmiI GGNNCC 4 cut(s) 171, 339, 697, 852
BmrFI CCNGG 2 cut(s) 7, 793
BmsI GCATC 1 cut(s) 812
BpiI GAAGAC 1 cut(s) 606
Bpu1102I GCTNAGC 1 cut(s) 542
Bpu14I TTCGAA 1 cut(s) 494
BpuEI CTTGAG 2 cut(s) 77, 262
BpuMI CCSGG 2 cut(s) 7, 793
BsaAI YACGTR 1 cut(s) 138
BsaBI GATNNNNATC 1 cut(s) 908
BsaJI CCNNGG 4 cut(s) 6, 218, 286, 937
BsaWI WCCGGW 1 cut(s) 707
Bsc4I CCNNNNNNNGG 1 cut(s) 255
Bse1I ACTGG 2 cut(s) 435, 1082
Bse3DI GCAATG 1 cut(s) 42
Bse8I GATNNNNATC 1 cut(s) 908
BseAI TCCGGA 1 cut(s) 707
BseDI CCNNGG 4 cut(s) 6, 218, 286, 937
BseGI GGATG 3 cut(s) 260, 801, 831
BseJI GATNNNNATC 1 cut(s) 908
BseLI CCNNNNNNNGG 1 cut(s) 255
BseMI GCAATG 1 cut(s) 42
BseMII CTCAG 1 cut(s) 533
BseNI ACTGG 2 cut(s) 435, 1082
BseRI GAGGAG 1 cut(s) 1065
BseSI GKGCMC 1 cut(s) 728
BseXI GCAGC 4 cut(s) 461, 558, 878, 908
BsgI GTGCAG 1 cut(s) 468
BshFI GGCC 1 cut(s) 5
BshNI GGYRCC 2 cut(s) 337, 695
BsiHKAI GWGCWC 1 cut(s) 728
BsiSI CCGG 3 cut(s) 6, 708, 792
BslFI GGGAC 1 cut(s) 864
BslI CCNNNNNNNGG 1 cut(s) 255
BsmAI GTCTC 1 cut(s) 1102
BsmFI GGGAC 1 cut(s) 864
BsnI GGCC 1 cut(s) 5
Bsp119I TTCGAA 1 cut(s) 494
Bsp1286I GDGCHC 1 cut(s) 728
Bsp13I TCCGGA 1 cut(s) 707
Bsp143I GATC 3 cut(s) 487, 526, 903
Bsp1720I GCTNAGC 1 cut(s) 542
BspACI CCGC 2 cut(s) 405, 899
BspANI GGCC 1 cut(s) 5
BspCNI CTCAG 1 cut(s) 534
BspEI TCCGGA 1 cut(s) 707
BspHI TCATGA 1 cut(s) 922
BspLI GGNNCC 4 cut(s) 171, 339, 697, 852
BspMAI CTGCAG 1 cut(s) 868
BspPI GGATC 1 cut(s) 534
BspT104I TTCGAA 1 cut(s) 494
BspT107I GGYRCC 2 cut(s) 337, 695
BsrDI GCAATG 1 cut(s) 42
BsrI ACTGG 2 cut(s) 435, 1082
BssECI CCNNGG 4 cut(s) 6, 218, 286, 937
BssMI GATC 3 cut(s) 487, 526, 903
BssT1I CCWWGG 3 cut(s) 218, 286, 937
Bst4CI ACNGT 4 cut(s) 273, 574, 606, 781
Bst6I CTCTTC 1 cut(s) 242
BstBAI YACGTR 1 cut(s) 138
BstBI TTCGAA 1 cut(s) 494
BstC8I GCNNGC 1 cut(s) 647
BstDEI CTNAG 2 cut(s) 542, 715
BstF5I GGATG 3 cut(s) 260, 801, 831
BstKTI GATC 3 cut(s) 490, 529, 906
BstMAI GTCTC 1 cut(s) 1102
BstMBI GATC 3 cut(s) 487, 526, 903
BstMWI GCNNNNNNNGC 5 cut(s) 53, 314, 593, 1031, 1040
BstSCI CCNGG 2 cut(s) 5, 791
BstSFI CTRYAG 1 cut(s) 864
BstSLI GKGCMC 1 cut(s) 728
BstSNI TACGTA 1 cut(s) 138
BstV1I GCAGC 4 cut(s) 461, 558, 878, 908
BstV2I GAAGAC 1 cut(s) 606
BstXI CCANNNNNNTGG 1 cut(s) 166
BsuI GTATCC 1 cut(s) 920
BsuRI GGCC 1 cut(s) 5
BtgZI GCGATG 1 cut(s) 1064
BtsCI GGATG 3 cut(s) 260, 801, 831
BtsIMutI CAGTG 3 cut(s) 428, 602, 777
Cac8I GCNNGC 1 cut(s) 647
CciI TCATGA 1 cut(s) 922
Cfr13I GGNCC 1 cut(s) 851
Csp6I GTAC 5 cut(s) 274, 365, 419, 426, 507
CviQI GTAC 5 cut(s) 274, 365, 419, 426, 507
DdeI CTNAG 2 cut(s) 542, 715
DpnI GATC 3 cut(s) 489, 528, 905
DpnII GATC 3 cut(s) 487, 526, 903
EaeI YGGCCR 1 cut(s) 3
Eam1104I CTCTTC 1 cut(s) 242
EarI CTCTTC 1 cut(s) 242
Eco105I TACGTA 1 cut(s) 138
Eco130I CCWWGG 3 cut(s) 218, 286, 937
Eco47I GGWCC 1 cut(s) 851
Eco57I CTGAAG 1 cut(s) 776
EcoO109I RGGNCCY 1 cut(s) 851
EcoT14I CCWWGG 3 cut(s) 218, 286, 937
ErhI CCWWGG 3 cut(s) 218, 286, 937
FalI AAGNNNNNCTT 2 cut(s) 374, 406
FaqI GGGAC 1 cut(s) 864
FbaI TGATCA 1 cut(s) 487
FblI GTMKAC 1 cut(s) 202
Fnu4HI GCNGC 4 cut(s) 450, 547, 867, 897
FokI GGATG 3 cut(s) 247, 808, 838
Fsp4HI GCNGC 4 cut(s) 450, 547, 867, 897
FspBI CTAG 3 cut(s) 626, 729, 1031
GluI GCNGC 4 cut(s) 450, 547, 867, 897
HaeIII GGCC 1 cut(s) 5
HapII CCGG 3 cut(s) 6, 708, 792
HincII GTYRAC 2 cut(s) 147, 331
HindII GTYRAC 2 cut(s) 147, 331
HindIII AAGCTT 1 cut(s) 943
HinfI GANTC 5 cut(s) 21, 291, 711, 1095, 1112
HpaII CCGG 3 cut(s) 6, 708, 792
HphI GGTGA 2 cut(s) 397, 913
Hpy166II GTNNAC 7 cut(s) 147, 203, 331, 388, 428, 726, 861
Hpy188I TCNGA 3 cut(s) 756, 888, 1094
Hpy188III TCNNGA 4 cut(s) 94, 241, 708, 923
Hpy8I GTNNAC 7 cut(s) 147, 203, 331, 388, 428, 726, 861
Hpy99I CGWCG 1 cut(s) 29
HpyAV CCTTC 6 cut(s) 10, 104, 376, 751, 1048, 1080
HpyCH4III ACNGT 4 cut(s) 273, 574, 606, 781
HpyCH4IV ACGT 1 cut(s) 137
HpyCH4V TGCA 7 cut(s) 399, 449, 596, 631, 726, 866, 1012
HpyF10VI GCNNNNNNNGC 5 cut(s) 53, 314, 593, 1031, 1040
HpyF3I CTNAG 2 cut(s) 542, 715
HpySE526I ACGT 1 cut(s) 137
Kpn2I TCCGGA 1 cut(s) 707
Ksp22I TGATCA 1 cut(s) 487
Kzo9I GATC 3 cut(s) 487, 526, 903
LmnI GCTCC 3 cut(s) 175, 1057, 1063
Lsp1109I GCAGC 4 cut(s) 461, 558, 878, 908
LweI GCATC 1 cut(s) 812
MaeI CTAG 3 cut(s) 626, 729, 1031
MaeII ACGT 1 cut(s) 137
MaeIII GTNAC 2 cut(s) 230, 346
MalI GATC 3 cut(s) 489, 528, 905
MboI GATC 3 cut(s) 487, 526, 903
MboII GAAGA 5 cut(s) 154, 229, 606, 853, 977
MhlI GDGCHC 1 cut(s) 728
MluCI AATT 4 cut(s) 150, 174, 513, 969
MlyI GAGTC 1 cut(s) 1104
MnlI CCTC 3 cut(s) 245, 749, 1086
MroI TCCGGA 1 cut(s) 707
MroXI GAANNNNTTC 2 cut(s) 20, 38
MslI CAYNNNNRTG 4 cut(s) 47, 433, 607, 782
MspA1I CMGCKG 1 cut(s) 899
MspI CCGG 3 cut(s) 6, 708, 792
MspR9I CCNGG 2 cut(s) 7, 793
MwoI GCNNNNNNNGC 5 cut(s) 53, 314, 593, 1031, 1040
NciI CCSGG 2 cut(s) 7, 793
NdeII GATC 3 cut(s) 487, 526, 903
NlaIV GGNNCC 4 cut(s) 171, 339, 697, 852
NmuCI GTSAC 1 cut(s) 346
NspV TTCGAA 1 cut(s) 494
OliI CACNNNNGTG 1 cut(s) 433
PagI TCATGA 1 cut(s) 922
PdmI GAANNNNTTC 2 cut(s) 20, 38
PfeI GAWTC 4 cut(s) 21, 291, 711, 1112
PkrI GCNGC 4 cut(s) 451, 548, 868, 898
PleI GAGTC 1 cut(s) 1103
PpsI GAGTC 1 cut(s) 1103
Ppu21I YACGTR 1 cut(s) 138
PpuMI RGGWCCY 1 cut(s) 851
Psp5II RGGWCCY 1 cut(s) 851
PspN4I GGNNCC 4 cut(s) 171, 339, 697, 852
PspPI GGNCC 1 cut(s) 851
PspPPI RGGWCCY 1 cut(s) 851
PstI CTGCAG 1 cut(s) 868
RsaI GTAC 5 cut(s) 275, 366, 420, 427, 508
RsaNI GTAC 5 cut(s) 274, 365, 419, 426, 507
RseI CAYNNNNRTG 4 cut(s) 47, 433, 607, 782
SatI GCNGC 4 cut(s) 450, 547, 867, 897
Sau3AI GATC 3 cut(s) 487, 526, 903
Sau96I GGNCC 1 cut(s) 851
ScaI AGTACT 3 cut(s) 275, 420, 508
SchI GAGTC 1 cut(s) 1104
ScrFI CCNGG 2 cut(s) 7, 793
SduI GDGCHC 1 cut(s) 728
SfaNI GCATC 1 cut(s) 812
SfcI CTRYAG 1 cut(s) 864
SfuI TTCGAA 1 cut(s) 494
SinI GGWCC 1 cut(s) 851
SmiMI CAYNNNNRTG 4 cut(s) 47, 433, 607, 782
SmlI CTYRAG 2 cut(s) 92, 241
SmoI CTYRAG 2 cut(s) 92, 241
SnaBI TACGTA 1 cut(s) 138
SpeI ACTAGT 1 cut(s) 728
Sse9I AATT 4 cut(s) 150, 174, 513, 969
SsiI CCGC 2 cut(s) 405, 899
SspI AATATT 1 cut(s) 85
SspMI CTAG 3 cut(s) 626, 729, 1031
StyD4I CCNGG 2 cut(s) 5, 791
StyI CCWWGG 3 cut(s) 218, 286, 937
TaaI ACNGT 4 cut(s) 273, 574, 606, 781
TaiI ACGT 1 cut(s) 140
TaqI TCGA 3 cut(s) 24, 155, 494
TasI AATT 4 cut(s) 150, 174, 513, 969
TatI WGTACW 3 cut(s) 273, 418, 506
TfiI GAWTC 4 cut(s) 21, 291, 711, 1112
TscAI CASTG 3 cut(s) 435, 609, 784
TseFI GTSAC 1 cut(s) 346
TseI GCWGC 4 cut(s) 449, 546, 866, 896
Tsp45I GTSAC 1 cut(s) 346
TspGWI ACGGA 2 cut(s) 733, 1090
TspRI CASTG 3 cut(s) 435, 609, 784
VneI GTGCAC 1 cut(s) 724
VpaK11BI GGWCC 1 cut(s) 851
XmiI GTMKAC 1 cut(s) 202
XmnI GAANNNNTTC 2 cut(s) 20, 38
XspI CTAG 3 cut(s) 626, 729, 1031
ZrmI AGTACT 3 cut(s) 275, 420, 508
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.