Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp02

Orthogroup ID

OG0000665

Physical Location & Seq

Genomic Coordinates Reverse (-)

23920848 .. 23923178

Gene Structure 2331 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.2G203500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1077 bp

ATGAATTGCTGTGAACAATGGAAGCCTATTGTTGCCATGTTGGTCATAAACTTTGCATTGGCTATGGTTAATGTACTTTTGAAGAAGACTTTGGATCAAGGATTGAACCATTTGATTATTGTTACTTATCGACAGTCGATTTCTGCTGTTTTCTTGGCACCTATTGCCTTCTTTTGGGAAAGAAAAAGCAGACCGGAGCTCACATTTCGAATCATATGCCAACTTTTCTTCAGTGCTCTTATTGGGGTAACATTCACACAATACTTATTTCTTATTGGACTTCAATACACCTCTGCGACATATTCCTGTGCCTTTATCAACATGGTGCCTGTTTTCACCTTCCTATTGGCTCTACCGTTTGGGCTAGAGAAAGTGAACATAAAGAGCAAGGGTGGCATAGCCAAAATCCTGGGTGCGCTGATATGTATTGCTGGAGCTTTGTCATTGACATTGTACAAAGGAATGCCACTAACAAACCCTAATTCACAAGACACAACTCAAATGCAAAACCATGTCAATACCATGACTTCAGCTAAGAAGACAGGGAGGTGGGCAGTTGGTTCAGTGCTTTTGCTGGTAGGCTGCCTCTTGTGGTCTTCATGGTTCCTCATACAAGCAAAAATTGGCAAGAGCTATCCTTTTCAATACTCCAGCACCGCTATCTTGTCGTTTTTCGGTGCCATTCAGGCAGCCATCTTGTACCTTATCACTGAGAGGAACCTCACCATGTCAATGTGGGCTATGAAGGGAAAGTTGGAGATCTTAAGTGTCACATATGCTGGAGCAGTTGGGTCAGGGTTGTGCTACGTAGGGATGTCATGGTGTGTGAAGCAAAAGGGTGCGCTATTCACAGCAGCATTTACACCCACCATTCAGATATTTGTGGCTATGGTGGACTTCTCTTTCTTTCATGAACAAATTTATCTTGGAAGTGTGGTGGGATCTGTCCTGGTCATAATTGGCATGTACATTTTACTGTGGGGTAAAAGCAATGATCCAAAGTTAATTGTGATCAAGCATACACAAGCAGCTGAAGATGAAGATGCAGAATGTGGTCCAATGCCACAAAACAAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005886 GO:0005887 GO:0005938 GO:0006810 GO:0007154 GO:0007165 GO:0008150 GO:0009719 GO:0009725 GO:0009733 GO:0009734 GO:0009755 GO:0009987 GO:0010033 GO:0016020 GO:0016021 GO:0022857 GO:0023052 GO:0031224 GO:0031226 GO:0032870 GO:0042221 GO:0044424 GO:0044425 GO:0044444 GO:0044459 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051179 GO:0051234 GO:0051716 GO:0055085 GO:0065007 GO:0070887 GO:0071310 GO:0071365 GO:0071495 GO:0071944 GO:0099568

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

EamA

Protein Analysis

359

Amino Acids

39.59

Weight (kDa)

9.2

Isoelectric Point (pI)

27.85

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000665)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G30340 AT3G30340 AT4G01440 AT4G01440 AT4G01440 AT4G01440 AT4G01440
fragaria_vesca	FvH4_5g10300 FvH4_7g18160 FvH4_7g18160 FvH4_7g18160 FvH4_7g18160 FvH4_7g18160 FvH4_7g18160 FvH4_7g18160 FvH4_7g18160 FvH4_7g18160 FvH4_7g18160
malus_domestica	MD00G1118800.v1.1 MD01G1095400.v1.1 MD01G1095700.v1.1 MD01G1097400.v1.1 MD06G1125400.v1.1 MD07G1164500.v1.1
prunus_persica	Prupe.2G203500_v2.0.a1 Prupe.5G135800_v2.0.a1 Prupe.5G135800_v2.0.a1 Prupe.5G135800_v2.0.a1 Prupe.5G135800_v2.0.a1 Prupe.5G135800_v2.0.a1 Prupe.5G135800_v2.0.a1 Prupe.5G135800_v2.0.a1 Prupe.5G135800_v2.0.a1 Prupe.5G135800_v2.0.a1 Prupe.5G135800_v2.0.a1 Prupe.5G135800_v2.0.a1 Prupe.5G135800_v2.0.a1 Prupe.5G135800_v2.0.a1 Prupe.5G135800_v2.0.a1 Prupe.5G135800_v2.0.a1 Prupe.5G135800_v2.0.a1 Prupe.5G135800_v2.0.a1 Prupe.5G135800_v2.0.a1
pyrus_communis	pycom06g11570 pycom07g15960 pycom14g11730
rosa_chinensis	RchiOBHm_Chr1g0361761 RchiOBHm_Chr1g0361771 RchiOBHm_Chr7g0187931
rosa_laevigata	RLG00000004746 RLG00000027703 RLG00000027704
rosa_multiflora	Rmu_co8477061.1_g000001 Rmu_sc0015523.1_g000006 Rmu_sc0030043.1_g000001 Rmu_ssc0000124.1_g000022
rosa_roxburghii	Rroxscaffold_3G00266930 Rroxscaffold_4G00294710
rosa_rugosa	Rorug01G0291400 Rorug06G0485400 Rorug06G0485500
rosa_samantha	Rh1AG301800 Rh1AG301900 Rh1BG264600 Rh1BG264700 Rh1CG283100 Rh1CG283200 Rh1DG294600 Rh1DG294700 Rh7AG090600 Rh7BG092200 Rh7CG091300 Rh7DG093000
rosa_wichuraiana	Rw1G026740 Rw1G026750 Rw7G007820

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	3 cut(s)	157, 325, 677
AciI	CCGC	1 cut(s)	657
AclWI	GGATC	3 cut(s)	102, 949, 989
AcsI	RAATTY	1 cut(s)	918
AcuI	CTGAAG	3 cut(s)	214, 513, 1053
AfaI	GTAC	4 cut(s)	75, 455, 701, 968
AfiI	CCNNNNNNNGG	1 cut(s)	174
AflII	CTTAAG	1 cut(s)	763
AgsI	TTSAA	4 cut(s)	82, 106, 284, 644
AjnI	CCWGG	2 cut(s)	408, 948
AjuI	GAANNNNNNNTTGG	4 cut(s)	74, 106, 737, 769
AluBI	AGCT	5 cut(s)	199, 437, 533, 633, 1031
AluI	AGCT	5 cut(s)	199, 437, 533, 633, 1031
Alw21I	GWGCWC	2 cut(s)	201, 238
AlwI	GGATC	3 cut(s)	102, 949, 989
ApeKI	GCWGC	4 cut(s)	582, 689, 854, 1028
ApoI	RAATTY	1 cut(s)	918
AspLEI	GCGC	2 cut(s)	418, 844
AspS9I	GGNCC	1 cut(s)	1055
AsuHPI	GGTGA	2 cut(s)	328, 715
AsuII	TTCGAA	1 cut(s)	208
AvaII	GGWCC	1 cut(s)	1055
BanI	GGYRCC	3 cut(s)	157, 325, 677
BanII	GRGCYC	1 cut(s)	201
BbsI	GAAGAC	3 cut(s)	92, 545, 588
Bbv12I	GWGCWC	2 cut(s)	201, 238
BbvI	GCAGC	4 cut(s)	569, 701, 866, 1040
BccI	CCATC	1 cut(s)	701
BcgI	CGANNNNNNTGC	2 cut(s)	198, 232
BciT130I	CCWGG	2 cut(s)	410, 950
BclI	TGATCA	1 cut(s)	1011
BfaI	CTAG	1 cut(s)	365
BfrI	CTTAAG	1 cut(s)	763
BglI	GCCNNNNNGGC	1 cut(s)	686
BglII	AGATCT	1 cut(s)	759
BisI	GCNGC	4 cut(s)	583, 690, 855, 1029
BlsI	GCNGC	4 cut(s)	584, 691, 856, 1030
Bme1390I	CCNGG	2 cut(s)	410, 950
Bme18I	GGWCC	1 cut(s)	1055
BmgT120I	GGNCC	1 cut(s)	1055
BmiI	GGNNCC	5 cut(s)	159, 327, 605, 679, 719
BmrFI	CCNGG	2 cut(s)	410, 950
BmsI	GCATC	1 cut(s)	1033
BpiI	GAAGAC	3 cut(s)	92, 545, 588
BpmI	CTGGAG	3 cut(s)	453, 634, 801
Bpu14I	TTCGAA	1 cut(s)	208
BsaAI	YACGTR	1 cut(s)	808
BsaJI	CCNNGG	1 cut(s)	409
BsaWI	WCCGGW	1 cut(s)	193
Bsc4I	CCNNNNNNNGG	1 cut(s)	174
Bse3DI	GCAATG	1 cut(s)	997
BseBI	CCWGG	2 cut(s)	410, 950
BseDI	CCNNGG	1 cut(s)	409
BseGI	GGATG	1 cut(s)	819
BseLI	CCNNNNNNNGG	1 cut(s)	174
BseMI	GCAATG	1 cut(s)	997
BseMII	CTCAG	1 cut(s)	702
BseXI	GCAGC	4 cut(s)	569, 701, 866, 1040
BshNI	GGYRCC	3 cut(s)	157, 325, 677
BsiHKAI	GWGCWC	2 cut(s)	201, 238
BsiSI	CCGG	1 cut(s)	194
BslI	CCNNNNNNNGG	1 cut(s)	174
BsmI	GAATGC	1 cut(s)	468
Bsp119I	TTCGAA	1 cut(s)	208
Bsp1286I	GDGCHC	2 cut(s)	201, 238
Bsp1407I	TGTACA	2 cut(s)	453, 966
Bsp143I	GATC	5 cut(s)	94, 759, 941, 994, 1011
BspACI	CCGC	1 cut(s)	657
BspCNI	CTCAG	1 cut(s)	703
BspHI	TCATGA	1 cut(s)	910
BspLI	GGNNCC	5 cut(s)	159, 327, 605, 679, 719
BspPI	GGATC	3 cut(s)	102, 949, 989
BspT104I	TTCGAA	1 cut(s)	208
BspT107I	GGYRCC	3 cut(s)	157, 325, 677
BspTI	CTTAAG	1 cut(s)	763
BsrDI	GCAATG	1 cut(s)	997
BsrGI	TGTACA	2 cut(s)	453, 966
BssECI	CCNNGG	1 cut(s)	409
BssMI	GATC	5 cut(s)	94, 759, 941, 994, 1011
Bst2UI	CCWGG	2 cut(s)	410, 950
Bst4CI	ACNGT	3 cut(s)	135, 357, 978
BstAFI	CTTAAG	1 cut(s)	763
BstAPI	GCANNNNNTGC	1 cut(s)	164
BstAUI	TGTACA	2 cut(s)	453, 966
BstBAI	YACGTR	1 cut(s)	808
BstBI	TTCGAA	1 cut(s)	208
BstDEI	CTNAG	2 cut(s)	534, 711
BstF5I	GGATG	1 cut(s)	819
BstHHI	GCGC	2 cut(s)	418, 844
BstKTI	GATC	5 cut(s)	97, 762, 944, 997, 1014
BstMBI	GATC	5 cut(s)	94, 759, 941, 994, 1011
BstMWI	GCNNNNNNNGC	3 cut(s)	164, 393, 686
BstNI	CCWGG	2 cut(s)	410, 950
BstNSI	RCATGY	1 cut(s)	967
BstSCI	CCNGG	2 cut(s)	408, 948
BstSNI	TACGTA	1 cut(s)	808
BstV1I	GCAGC	4 cut(s)	569, 701, 866, 1040
BstV2I	GAAGAC	3 cut(s)	92, 545, 588
BstX2I	RGATCY	2 cut(s)	759, 941
BstXI	CCANNNNNNTGG	1 cut(s)	409
BstYI	RGATCY	2 cut(s)	759, 941
BtsCI	GGATG	1 cut(s)	819
BtsIMutI	CAGTG	3 cut(s)	238, 570, 708
CciI	TCATGA	1 cut(s)	910
CfoI	GCGC	2 cut(s)	418, 844
Cfr13I	GGNCC	1 cut(s)	1055
Csp6I	GTAC	4 cut(s)	74, 454, 700, 967
CviAII	CATG	9 cut(s)	37, 322, 512, 523, 600, 727, 819, 911, 964
CviQI	GTAC	4 cut(s)	74, 454, 700, 967
DdeI	CTNAG	2 cut(s)	534, 711
DpnI	GATC	5 cut(s)	96, 761, 943, 996, 1013
DpnII	GATC	5 cut(s)	94, 759, 941, 994, 1011
Ecl136II	GAGCTC	1 cut(s)	199
Eco105I	TACGTA	1 cut(s)	808
Eco24I	GRGCYC	1 cut(s)	201
Eco47I	GGWCC	1 cut(s)	1055
Eco53kI	GAGCTC	1 cut(s)	199
Eco57I	CTGAAG	3 cut(s)	214, 513, 1053
EcoICRI	GAGCTC	1 cut(s)	199
EcoRII	CCWGG	2 cut(s)	408, 948
EcoT38I	GRGCYC	1 cut(s)	201
FaeI	CATG	9 cut(s)	40, 325, 515, 526, 603, 730, 822, 914, 967
FatI	CATG	9 cut(s)	36, 321, 511, 522, 599, 726, 818, 910, 963
FauNDI	CATATG	2 cut(s)	215, 775
FbaI	TGATCA	1 cut(s)	1011
Fnu4HI	GCNGC	4 cut(s)	583, 690, 855, 1029
FokI	GGATG	1 cut(s)	826
FriOI	GRGCYC	1 cut(s)	201
Fsp4HI	GCNGC	4 cut(s)	583, 690, 855, 1029
FspBI	CTAG	1 cut(s)	365
GlaI	GCGC	2 cut(s)	417, 843
GluI	GCNGC	4 cut(s)	583, 690, 855, 1029
GsuI	CTGGAG	3 cut(s)	453, 634, 801
HapII	CCGG	1 cut(s)	194
HhaI	GCGC	2 cut(s)	418, 844
Hin1II	CATG	9 cut(s)	40, 325, 515, 526, 603, 730, 822, 914, 967
Hin6I	GCGC	2 cut(s)	416, 842
HinP1I	GCGC	2 cut(s)	416, 842
HinfI	GANTC	1 cut(s)	210
HpaII	CCGG	1 cut(s)	194
HphI	GGTGA	2 cut(s)	328, 715
Hpy166II	GTNNAC	3 cut(s)	14, 376, 895
Hpy188I	TCNGA	1 cut(s)	876
Hpy188III	TCNNGA	1 cut(s)	911
Hpy8I	GTNNAC	3 cut(s)	14, 376, 895
HpyAV	CCTTC	3 cut(s)	178, 349, 739
HpyCH4III	ACNGT	3 cut(s)	135, 357, 978
HpyCH4IV	ACGT	1 cut(s)	807
HpyCH4V	TGCA	3 cut(s)	56, 505, 1046
HpyF10VI	GCNNNNNNNGC	3 cut(s)	164, 393, 686
HpyF3I	CTNAG	2 cut(s)	534, 711
HpySE526I	ACGT	1 cut(s)	807
Hsp92II	CATG	9 cut(s)	40, 325, 515, 526, 603, 730, 822, 914, 967
HspAI	GCGC	2 cut(s)	416, 842
Ksp22I	TGATCA	1 cut(s)	1011
Kzo9I	GATC	5 cut(s)	94, 759, 941, 994, 1011
LmnI	GCTCC	3 cut(s)	196, 434, 782
Lsp1109I	GCAGC	4 cut(s)	569, 701, 866, 1040
LweI	GCATC	1 cut(s)	1033
MaeI	CTAG	1 cut(s)	365
MaeII	ACGT	1 cut(s)	807
MaeIII	GTNAC	3 cut(s)	121, 247, 769
MalI	GATC	5 cut(s)	96, 761, 943, 996, 1013
MboI	GATC	5 cut(s)	94, 759, 941, 994, 1011
MboII	GAAGA	7 cut(s)	94, 97, 220, 550, 588, 1046, 1052
MflI	RGATCY	2 cut(s)	759, 941
MhlI	GDGCHC	2 cut(s)	201, 238
MluCI	AATT	6 cut(s)	4, 481, 621, 918, 957, 1005
MmeI	TCCRAC	1 cut(s)	735
MnlI	CCTC	6 cut(s)	301, 540, 596, 617, 708, 731
MseI	TTAA	3 cut(s)	69, 764, 1004
MslI	CAYNNNNRTG	1 cut(s)	731
MspA1I	CMGCKG	1 cut(s)	1031
MspCI	CTTAAG	1 cut(s)	763
MspI	CCGG	1 cut(s)	194
MspR9I	CCNGG	2 cut(s)	410, 950
Mva1269I	GAATGC	1 cut(s)	468
MvaI	CCWGG	2 cut(s)	410, 950
MwoI	GCNNNNNNNGC	3 cut(s)	164, 393, 686
NdeI	CATATG	2 cut(s)	215, 775
NdeII	GATC	5 cut(s)	94, 759, 941, 994, 1011
NlaIII	CATG	9 cut(s)	40, 325, 515, 526, 603, 730, 822, 914, 967
NlaIV	GGNNCC	5 cut(s)	159, 327, 605, 679, 719
NmuCI	GTSAC	1 cut(s)	769
NspI	RCATGY	1 cut(s)	967
NspV	TTCGAA	1 cut(s)	208
PagI	TCATGA	1 cut(s)	910
PctI	GAATGC	1 cut(s)	468
PfeI	GAWTC	1 cut(s)	210
PkrI	GCNGC	4 cut(s)	584, 691, 856, 1030
Ppu21I	YACGTR	1 cut(s)	808
Psp124BI	GAGCTC	1 cut(s)	201
Psp6I	CCWGG	2 cut(s)	408, 948
PspGI	CCWGG	2 cut(s)	408, 948
PspN4I	GGNNCC	5 cut(s)	159, 327, 605, 679, 719
PspPI	GGNCC	1 cut(s)	1055
PsuI	RGATCY	2 cut(s)	759, 941
PvuII	CAGCTG	1 cut(s)	1031
RsaI	GTAC	4 cut(s)	75, 455, 701, 968
RsaNI	GTAC	4 cut(s)	74, 454, 700, 967
RseI	CAYNNNNRTG	1 cut(s)	731
SacI	GAGCTC	1 cut(s)	201
SaqAI	TTAA	3 cut(s)	69, 764, 1004
SatI	GCNGC	4 cut(s)	583, 690, 855, 1029
Sau3AI	GATC	5 cut(s)	94, 759, 941, 994, 1011
Sau96I	GGNCC	1 cut(s)	1055
ScrFI	CCNGG	2 cut(s)	410, 950
SduI	GDGCHC	2 cut(s)	201, 238
SfaNI	GCATC	1 cut(s)	1033
SfuI	TTCGAA	1 cut(s)	208
SinI	GGWCC	1 cut(s)	1055
SmiMI	CAYNNNNRTG	1 cut(s)	731
SmlI	CTYRAG	1 cut(s)	763
SmoI	CTYRAG	1 cut(s)	763
SnaBI	TACGTA	1 cut(s)	808
Sse9I	AATT	6 cut(s)	4, 481, 621, 918, 957, 1005
SsiI	CCGC	1 cut(s)	657
SspMI	CTAG	1 cut(s)	365
SstI	GAGCTC	1 cut(s)	201
StyD4I	CCNGG	2 cut(s)	408, 948
TaaI	ACNGT	3 cut(s)	135, 357, 978
TaiI	ACGT	1 cut(s)	810
TaqI	TCGA	3 cut(s)	130, 137, 208
TasI	AATT	6 cut(s)	4, 481, 621, 918, 957, 1005
TatI	WGTACW	3 cut(s)	73, 453, 966
TfiI	GAWTC	1 cut(s)	210
Tru1I	TTAA	3 cut(s)	69, 764, 1004
Tru9I	TTAA	3 cut(s)	69, 764, 1004
TscAI	CASTG	3 cut(s)	238, 570, 715
TseFI	GTSAC	1 cut(s)	769
TseI	GCWGC	4 cut(s)	582, 689, 854, 1028
Tsp45I	GTSAC	1 cut(s)	769
TspDTI	ATGAA	6 cut(s)	17, 588, 758, 899, 927, 1053
TspRI	CASTG	3 cut(s)	238, 570, 715
Vha464I	CTTAAG	1 cut(s)	763
VpaK11BI	GGWCC	1 cut(s)	1055
XapI	RAATTY	1 cut(s)	918
XceI	RCATGY	1 cut(s)	967
XspI	CTAG	1 cut(s)	365

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.