Rh1DG294600

WAT1-related protein

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1D
Physical Location & Seq
Reverse (-)
52050638 .. 52052777
2140 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1DG294600.1

Sequence Viewer

Length: 1056 bp
ATGGTGAATTACAGAGAATGGATGCCTACTGTTGCCATGGTTGCCATAAACCTAGCTTTTGCTGGAGCCAATGTGCTTCTTAAGTTGACTTTGGATCAAGGAGTACACAATTTGGTGGTTGTTACTTATCGGCAGTTGATTTCTTGTGTCTTATTGACACCCATTGCCTTGTTTTGGGAAAGAAAAAGCAGACCCGAACTTGCAGCTGGCATCATATGCCACCTTTTCTTCAGTGCTCTAATTGGGGTAACATTCACACAATACTTGTTTCTTCTTGGACTCCAATACACCTCAGCTACCTATTCCTGTGCATTCATCAACATGGTTCCTGTGAACACTTTCCTATTGGCACTACCATTTGGTCTAGAGAAAGTAAACATTAGGAGCAAAGGAGGCAGAGCAAAGATCTTGGGTGCTCTGATATGCATTGGTGGAGCTTTGTCATTGACATTATACAAAGGAACGTCACTAACCAATCAACATTCCCATGCCACATCTCAAAACGAAGACCATGATTATATGAGGAGAGCAGCAAAGGATAAAGAGAAGTGGGCAGTTGGTTCCCTGCTTTTAGCAGCAGGTTGCCTCTTGTGGGCTTCATGGTTTCTCATACAAGCCAAGATTGGCAAGAGCTACCCATTTCAGTACTCTAGCACAGCTATCTTGTCCTTCTTCGGTGCCATTCAATCAGCCATCTTGAGCTTGGTTACCGAGAGAAACATGAACATGTCAATGTGGGTTTTGAAGGGGAAGTTGGAGATATTAGGTGTCCTATATGCTGGAGCAATTGGATCAGGGTTGTGCTATGTAGGGATGTCATGGTGTGTGAAACAAAAGGGTCCATTGTTTACAGCAGCATTTACCCCCTTAACCCAGATTTTTGTGGCTATGTTTGACTTCTCAACCTTGAAAGAACAAATCTATCTTGGAAGTGTGGTGGGATCTATCCTAGTCATAGTGGGAATGTATGTTCTACTGTGGGGGAAAAGCAATGATGCAAAGGAAACTGTGATGAAGCAGACACAAGCAGCTGAAGAAGGTGCTGATGTCCCTTGA

Protein Analysis

351

Amino Acids

38.48

Weight (kDa)

9.14

Isoelectric Point (pI)

30.76

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
EamA PF00892 12 - 146 4.8e-11 EamA-like transporter family
EamA PF00892 187 - 326 5.8e-11 EamA-like transporter family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0000665)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 569
AccB1I GGYRCC 1 cut(s) 677
AclWI GGATC 3 cut(s) 102, 799, 949
AcuI CTGAAG 2 cut(s) 214, 1053
AfaI GTAC 2 cut(s) 105, 647
AfiI CCNNNNNNNGG 2 cut(s) 174, 592
AflII CTTAAG 1 cut(s) 80
AflIII ACRYGT 1 cut(s) 726
AgsI TTSAA 3 cut(s) 686, 745, 910
AjuI GAANNNNNNNTTGG 2 cut(s) 737, 769
AloI GAACNNNNNNTCC 2 cut(s) 954, 986
AluBI AGCT 8 cut(s) 56, 206, 296, 437, 633, 659, 702, 1031
AluI AGCT 8 cut(s) 56, 206, 296, 437, 633, 659, 702, 1031
Alw21I GWGCWC 2 cut(s) 238, 418
AlwI GGATC 3 cut(s) 102, 799, 949
ApeKI GCWGC 5 cut(s) 203, 530, 575, 854, 1028
Asp700I GAANNNNTTC 1 cut(s) 338
AspS9I GGNCC 1 cut(s) 839
AsuHPI GGTGA 1 cut(s) 16
AvaII GGWCC 1 cut(s) 839
BanI GGYRCC 1 cut(s) 677
BbsI GAAGAC 1 cut(s) 513
Bbv12I GWGCWC 2 cut(s) 238, 418
BbvCI CCTCAGC 1 cut(s) 292
BbvI GCAGC 5 cut(s) 215, 542, 587, 866, 1040
BccI CCATC 1 cut(s) 701
BfaI CTAG 4 cut(s) 53, 365, 651, 950
BfrI CTTAAG 1 cut(s) 80
BfuAI ACCTGC 1 cut(s) 569
BglII AGATCT 1 cut(s) 405
BisI GCNGC 5 cut(s) 204, 531, 576, 855, 1029
BlsI GCNGC 5 cut(s) 205, 532, 577, 856, 1030
BmcAI AGTACT 1 cut(s) 647
Bme18I GGWCC 1 cut(s) 839
BmgT120I GGNCC 1 cut(s) 839
BmiI GGNNCC 5 cut(s) 67, 327, 562, 679, 840
BmsI GCATC 3 cut(s) 12, 219, 985
BpiI GAAGAC 1 cut(s) 513
BpmI CTGGAG 2 cut(s) 84, 801
Bpu10I CCTNAGC 1 cut(s) 292
BpuEI CTTGAG 1 cut(s) 718
BsaJI CCNNGG 1 cut(s) 36
BsaXI ACNNNNNCTCC 2 cut(s) 57, 87
Bsc4I CCNNNNNNNGG 2 cut(s) 174, 592
Bse3DI GCAATG 2 cut(s) 162, 997
BseDI CCNNGG 1 cut(s) 36
BseGI GGATG 2 cut(s) 27, 819
BseLI CCNNNNNNNGG 2 cut(s) 174, 592
BseMI GCAATG 2 cut(s) 162, 997
BseMII CTCAG 1 cut(s) 306
BseRI GAGGAG 1 cut(s) 538
BseXI GCAGC 5 cut(s) 215, 542, 587, 866, 1040
BshNI GGYRCC 1 cut(s) 677
BsiHKAI GWGCWC 2 cut(s) 238, 418
BslFI GGGAC 1 cut(s) 1034
BslI CCNNNNNNNGG 2 cut(s) 174, 592
BsmFI GGGAC 1 cut(s) 1034
BsmI GAATGC 1 cut(s) 311
Bsp1286I GDGCHC 2 cut(s) 238, 418
Bsp143I GATC 4 cut(s) 94, 405, 791, 941
Bsp19I CCATGG 1 cut(s) 36
BspCNI CTCAG 1 cut(s) 305
BspLI GGNNCC 5 cut(s) 67, 327, 562, 679, 840
BspMI ACCTGC 1 cut(s) 569
BspPI GGATC 3 cut(s) 102, 799, 949
BspT107I GGYRCC 1 cut(s) 677
BspTI CTTAAG 1 cut(s) 80
BsrDI GCAATG 2 cut(s) 162, 997
BssECI CCNNGG 1 cut(s) 36
BssMI GATC 4 cut(s) 94, 405, 791, 941
BssT1I CCWWGG 1 cut(s) 36
Bst4CI ACNGT 3 cut(s) 31, 978, 1009
BstAFI CTTAAG 1 cut(s) 80
BstAPI GCANNNNNTGC 1 cut(s) 216
BstC8I GCNNGC 1 cut(s) 208
BstDEI CTNAG 1 cut(s) 292
BstDSI CCRYGG 1 cut(s) 36
BstEII GGTNACC 1 cut(s) 706
BstF5I GGATG 2 cut(s) 27, 819
BstKTI GATC 4 cut(s) 97, 408, 794, 944
BstMBI GATC 4 cut(s) 94, 405, 791, 941
BstMWI GCNNNNNNNGC 3 cut(s) 41, 216, 393
BstNSI RCATGY 1 cut(s) 730
BstPI GGTNACC 1 cut(s) 706
BstV1I GCAGC 5 cut(s) 215, 542, 587, 866, 1040
BstV2I GAAGAC 1 cut(s) 513
BstX2I RGATCY 2 cut(s) 405, 941
BstYI RGATCY 2 cut(s) 405, 941
BtgI CCRYGG 1 cut(s) 36
BtsCI GGATG 2 cut(s) 27, 819
BtsIMutI CAGTG 1 cut(s) 238
BveI ACCTGC 1 cut(s) 569
Cac8I GCNNGC 1 cut(s) 208
Cfr13I GGNCC 1 cut(s) 839
Csp6I GTAC 2 cut(s) 104, 646
CviAII CATG 8 cut(s) 37, 322, 488, 512, 600, 721, 727, 819
CviQI GTAC 2 cut(s) 104, 646
DdeI CTNAG 1 cut(s) 292
DpnI GATC 4 cut(s) 96, 407, 793, 943
DpnII GATC 4 cut(s) 94, 405, 791, 941
Eco130I CCWWGG 1 cut(s) 36
Eco47I GGWCC 1 cut(s) 839
Eco57I CTGAAG 2 cut(s) 214, 1053
Eco91I GGTNACC 1 cut(s) 706
EcoO65I GGTNACC 1 cut(s) 706
EcoT14I CCWWGG 1 cut(s) 36
EcoT22I ATGCAT 1 cut(s) 428
ErhI CCWWGG 1 cut(s) 36
FaeI CATG 8 cut(s) 40, 325, 491, 515, 603, 724, 730, 822
FaqI GGGAC 1 cut(s) 1034
FatI CATG 8 cut(s) 36, 321, 487, 511, 599, 720, 726, 818
FauNDI CATATG 1 cut(s) 215
Fnu4HI GCNGC 5 cut(s) 204, 531, 576, 855, 1029
FokI GGATG 2 cut(s) 34, 826
Fsp4HI GCNGC 5 cut(s) 204, 531, 576, 855, 1029
FspBI CTAG 4 cut(s) 53, 365, 651, 950
GluI GCNGC 5 cut(s) 204, 531, 576, 855, 1029
GsuI CTGGAG 2 cut(s) 84, 801
Hin1II CATG 8 cut(s) 40, 325, 491, 515, 603, 724, 730, 822
HincII GTYRAC 1 cut(s) 87
HindII GTYRAC 1 cut(s) 87
HinfI GANTC 1 cut(s) 279
HphI GGTGA 1 cut(s) 16
Hpy166II GTNNAC 5 cut(s) 87, 106, 334, 376, 849
Hpy188I TCNGA 1 cut(s) 420
Hpy188III TCNNGA 2 cut(s) 365, 697
Hpy8I GTNNAC 5 cut(s) 87, 106, 334, 376, 849
HpyAV CCTTC 3 cut(s) 679, 739, 1031
HpyCH4III ACNGT 3 cut(s) 31, 978, 1009
HpyCH4IV ACGT 1 cut(s) 464
HpyCH4V TGCA 4 cut(s) 203, 311, 426, 998
HpyF10VI GCNNNNNNNGC 3 cut(s) 41, 216, 393
HpyF3I CTNAG 1 cut(s) 292
HpySE526I ACGT 1 cut(s) 464
Hsp92II CATG 8 cut(s) 40, 325, 491, 515, 603, 724, 730, 822
Kzo9I GATC 4 cut(s) 94, 405, 791, 941
LmnI GCTCC 4 cut(s) 65, 384, 434, 782
LpnPI CCDG 9 cut(s) 48, 192, 319, 342, 564, 578, 765, 780, 887
Lsp1109I GCAGC 5 cut(s) 215, 542, 587, 866, 1040
LweI GCATC 3 cut(s) 12, 219, 985
MaeI CTAG 4 cut(s) 53, 365, 651, 950
MaeII ACGT 1 cut(s) 464
MaeIII GTNAC 4 cut(s) 121, 247, 465, 706
MalI GATC 4 cut(s) 96, 407, 793, 943
MboI GATC 4 cut(s) 94, 405, 791, 941
MboII GAAGA 5 cut(s) 220, 263, 518, 664, 1046
MfeI CAATTG 1 cut(s) 786
MflI RGATCY 2 cut(s) 405, 941
MhlI GDGCHC 2 cut(s) 238, 418
MluCI AATT 4 cut(s) 7, 109, 240, 786
MlyI GAGTC 1 cut(s) 273
MmeI TCCRAC 1 cut(s) 735
MnlI CCTC 4 cut(s) 301, 386, 516, 596
Mph1103I ATGCAT 1 cut(s) 428
MroXI GAANNNNTTC 1 cut(s) 338
MseI TTAA 2 cut(s) 81, 869
MslI CAYNNNNRTG 4 cut(s) 320, 486, 725, 731
MspA1I CMGCKG 2 cut(s) 206, 1031
MspCI CTTAAG 1 cut(s) 80
MunI CAATTG 1 cut(s) 786
Mva1269I GAATGC 1 cut(s) 311
MwoI GCNNNNNNNGC 3 cut(s) 41, 216, 393
NcoI CCATGG 1 cut(s) 36
NdeI CATATG 1 cut(s) 215
NdeII GATC 4 cut(s) 94, 405, 791, 941
NlaIII CATG 8 cut(s) 40, 325, 491, 515, 603, 724, 730, 822
NlaIV GGNNCC 5 cut(s) 67, 327, 562, 679, 840
NmuCI GTSAC 1 cut(s) 465
NsiI ATGCAT 1 cut(s) 428
NspI RCATGY 1 cut(s) 730
PciI ACATGT 1 cut(s) 726
PctI GAATGC 1 cut(s) 311
PdmI GAANNNNTTC 1 cut(s) 338
PkrI GCNGC 5 cut(s) 205, 532, 577, 856, 1030
PleI GAGTC 1 cut(s) 273
PpsI GAGTC 1 cut(s) 273
PscI ACATGT 1 cut(s) 726
PspEI GGTNACC 1 cut(s) 706
PspN4I GGNNCC 5 cut(s) 67, 327, 562, 679, 840
PspPI GGNCC 1 cut(s) 839
PsuI RGATCY 2 cut(s) 405, 941
PvuII CAGCTG 2 cut(s) 206, 1031
RsaI GTAC 2 cut(s) 105, 647
RsaNI GTAC 2 cut(s) 104, 646
RseI CAYNNNNRTG 4 cut(s) 320, 486, 725, 731
SaqAI TTAA 2 cut(s) 81, 869
SatI GCNGC 5 cut(s) 204, 531, 576, 855, 1029
Sau3AI GATC 4 cut(s) 94, 405, 791, 941
Sau96I GGNCC 1 cut(s) 839
ScaI AGTACT 1 cut(s) 647
SchI GAGTC 1 cut(s) 273
SduI GDGCHC 2 cut(s) 238, 418
SfaNI GCATC 3 cut(s) 12, 219, 985
SinI GGWCC 1 cut(s) 839
SmiMI CAYNNNNRTG 4 cut(s) 320, 486, 725, 731
SmlI CTYRAG 2 cut(s) 80, 697
SmoI CTYRAG 2 cut(s) 80, 697
Sse9I AATT 4 cut(s) 7, 109, 240, 786
SspMI CTAG 4 cut(s) 53, 365, 651, 950
StyI CCWWGG 1 cut(s) 36
TaaI ACNGT 3 cut(s) 31, 978, 1009
TaiI ACGT 1 cut(s) 467
TasI AATT 4 cut(s) 7, 109, 240, 786
TatI WGTACW 2 cut(s) 103, 645
Tru1I TTAA 2 cut(s) 81, 869
Tru9I TTAA 2 cut(s) 81, 869
TscAI CASTG 1 cut(s) 238
TseFI GTSAC 1 cut(s) 465
TseI GCWGC 5 cut(s) 203, 530, 575, 854, 1028
Tsp45I GTSAC 1 cut(s) 465
TspDTI ATGAA 4 cut(s) 304, 588, 737, 1028
TspRI CASTG 1 cut(s) 238
Vha464I CTTAAG 1 cut(s) 80
VpaK11BI GGWCC 1 cut(s) 839
XbaI TCTAGA 1 cut(s) 364
XceI RCATGY 1 cut(s) 730
XcmI CCANNNNNNNNNTGG 1 cut(s) 700
XmnI GAANNNNTTC 1 cut(s) 338
XspI CTAG 4 cut(s) 53, 365, 651, 950
ZrmI AGTACT 1 cut(s) 647
Zsp2I ATGCAT 1 cut(s) 428
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.