Rh1BG264600

WAT1-related protein

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1B
Physical Location & Seq
Reverse (-)
39886169 .. 39888799
2631 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1BG264600.1

Sequence Viewer

Length: 795 bp
ATGGTGAATTACAGAGAATGGATGCCTACTGTTGCCATGGTTGCCATAAACCTAGCTTTTGCTGGAGCCAATGTGCTTCTTAAGTTGACTTTGGATCAAGGAGTACACAATTTGGTGGTTGTTACTTATCGGCAGTTGATTTCTTGTGTCTTATTGACACCCATTGCCTTGTTTTGGGAAAGCAGAAAAAGCAGACCCGAACTTGCAGCTGGCATCATATGCCACCTTTTCTTCAGTGCTCTAATTGGGGTAACATTCACACAATACTTGTTTCTTCTTGGACTCCAATACACCTCAGCTACCTATTCCTGTGCATTCATCAACATGGTTCCTGTGAACACTTTCCTATTGGCACTACCATTTGGTCTAGAGAAAGTAAACATTAGGAGCAAAGGAGGCAGAGCAAAGATCTTGGGTGCTCTGATATGCATTGGTGGAGCTTTGTCATTGACATTATACAAAGGAACGTCACTAACCAATCAACATTCCCATGCCACATCTCAAAACGAAGACCATGATTATATGAGGAGAGCAGCAAAGGATAAAGAGAAGTGGGCAGTTGGTTCCCTGCTTTTAGCAGCAGGTTGCCTCTTGTGGGCTTCATGGTTTCTCATACAAGCCAAGATTGGCAAGAGCTACCCATTTCAGTACTCTAGCACAGCTATCTTGTCCTTCTTCGGTGCCATTCAATCAGCCATCTTGAGCTTGGTTACCGAGAGAAACATGAACATGTCAATGTGGGTTTTGAAGGGGAAGTTGGAGATATTAGGTGTCCTATATGCTGTGAGTAACTAA

Protein Analysis

264

Amino Acids

29.13

Weight (kDa)

9.47

Isoelectric Point (pI)

34.78

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
EamA PF00892 12 - 147 3.8e-11 EamA-like transporter family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0000665)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 572
AccB1I GGYRCC 1 cut(s) 680
AclWI GGATC 1 cut(s) 102
AcuI CTGAAG 1 cut(s) 217
AfaI GTAC 2 cut(s) 105, 650
AfiI CCNNNNNNNGG 2 cut(s) 174, 595
AflII CTTAAG 1 cut(s) 80
AflIII ACRYGT 1 cut(s) 729
AgsI TTSAA 2 cut(s) 689, 748
AjuI GAANNNNNNNTTGG 2 cut(s) 740, 772
AluBI AGCT 7 cut(s) 56, 209, 299, 440, 636, 662, 705
AluI AGCT 7 cut(s) 56, 209, 299, 440, 636, 662, 705
Alw21I GWGCWC 2 cut(s) 241, 421
AlwI GGATC 1 cut(s) 102
ApeKI GCWGC 3 cut(s) 206, 533, 578
Asp700I GAANNNNTTC 1 cut(s) 341
AsuHPI GGTGA 1 cut(s) 16
BanI GGYRCC 1 cut(s) 680
BbsI GAAGAC 1 cut(s) 516
Bbv12I GWGCWC 2 cut(s) 241, 421
BbvCI CCTCAGC 1 cut(s) 295
BbvI GCAGC 3 cut(s) 218, 545, 590
BccI CCATC 1 cut(s) 704
BfaI CTAG 3 cut(s) 53, 368, 654
BfrI CTTAAG 1 cut(s) 80
BfuAI ACCTGC 1 cut(s) 572
BglII AGATCT 1 cut(s) 408
BisI GCNGC 3 cut(s) 207, 534, 579
BlsI GCNGC 3 cut(s) 208, 535, 580
BmcAI AGTACT 1 cut(s) 650
BmiI GGNNCC 4 cut(s) 67, 330, 565, 682
BmsI GCATC 2 cut(s) 12, 222
BpiI GAAGAC 1 cut(s) 516
BpmI CTGGAG 1 cut(s) 84
Bpu10I CCTNAGC 1 cut(s) 295
BpuEI CTTGAG 1 cut(s) 721
BsaJI CCNNGG 1 cut(s) 36
BsaXI ACNNNNNCTCC 2 cut(s) 57, 87
Bsc4I CCNNNNNNNGG 2 cut(s) 174, 595
Bse3DI GCAATG 1 cut(s) 162
BseDI CCNNGG 1 cut(s) 36
BseGI GGATG 1 cut(s) 27
BseLI CCNNNNNNNGG 2 cut(s) 174, 595
BseMI GCAATG 1 cut(s) 162
BseMII CTCAG 1 cut(s) 309
BseRI GAGGAG 1 cut(s) 541
BseXI GCAGC 3 cut(s) 218, 545, 590
BshNI GGYRCC 1 cut(s) 680
BsiHKAI GWGCWC 2 cut(s) 241, 421
BslI CCNNNNNNNGG 2 cut(s) 174, 595
BsmI GAATGC 1 cut(s) 314
Bsp1286I GDGCHC 2 cut(s) 241, 421
Bsp143I GATC 2 cut(s) 94, 408
Bsp19I CCATGG 1 cut(s) 36
BspCNI CTCAG 1 cut(s) 308
BspLI GGNNCC 4 cut(s) 67, 330, 565, 682
BspMI ACCTGC 1 cut(s) 572
BspPI GGATC 1 cut(s) 102
BspT107I GGYRCC 1 cut(s) 680
BspTI CTTAAG 1 cut(s) 80
BsrDI GCAATG 1 cut(s) 162
BssECI CCNNGG 1 cut(s) 36
BssMI GATC 2 cut(s) 94, 408
BssT1I CCWWGG 1 cut(s) 36
Bst4CI ACNGT 1 cut(s) 31
BstAFI CTTAAG 1 cut(s) 80
BstAPI GCANNNNNTGC 1 cut(s) 219
BstC8I GCNNGC 1 cut(s) 211
BstDEI CTNAG 1 cut(s) 295
BstDSI CCRYGG 1 cut(s) 36
BstEII GGTNACC 1 cut(s) 709
BstF5I GGATG 1 cut(s) 27
BstKTI GATC 2 cut(s) 97, 411
BstMBI GATC 2 cut(s) 94, 408
BstMWI GCNNNNNNNGC 4 cut(s) 41, 189, 219, 396
BstNSI RCATGY 1 cut(s) 733
BstPI GGTNACC 1 cut(s) 709
BstV1I GCAGC 3 cut(s) 218, 545, 590
BstV2I GAAGAC 1 cut(s) 516
BstX2I RGATCY 1 cut(s) 408
BstYI RGATCY 1 cut(s) 408
BtgI CCRYGG 1 cut(s) 36
BtsCI GGATG 1 cut(s) 27
BtsIMutI CAGTG 1 cut(s) 241
BveI ACCTGC 1 cut(s) 572
Cac8I GCNNGC 1 cut(s) 211
Csp6I GTAC 2 cut(s) 104, 649
CviAII CATG 7 cut(s) 37, 325, 491, 515, 603, 724, 730
CviQI GTAC 2 cut(s) 104, 649
DdeI CTNAG 1 cut(s) 295
DpnI GATC 2 cut(s) 96, 410
DpnII GATC 2 cut(s) 94, 408
Eco130I CCWWGG 1 cut(s) 36
Eco57I CTGAAG 1 cut(s) 217
Eco91I GGTNACC 1 cut(s) 709
EcoO65I GGTNACC 1 cut(s) 709
EcoT14I CCWWGG 1 cut(s) 36
EcoT22I ATGCAT 1 cut(s) 431
ErhI CCWWGG 1 cut(s) 36
FaeI CATG 7 cut(s) 40, 328, 494, 518, 606, 727, 733
FatI CATG 7 cut(s) 36, 324, 490, 514, 602, 723, 729
FauNDI CATATG 1 cut(s) 218
Fnu4HI GCNGC 3 cut(s) 207, 534, 579
FokI GGATG 1 cut(s) 34
Fsp4HI GCNGC 3 cut(s) 207, 534, 579
FspBI CTAG 3 cut(s) 53, 368, 654
GluI GCNGC 3 cut(s) 207, 534, 579
GsuI CTGGAG 1 cut(s) 84
Hin1II CATG 7 cut(s) 40, 328, 494, 518, 606, 727, 733
HincII GTYRAC 1 cut(s) 87
HindII GTYRAC 1 cut(s) 87
HinfI GANTC 1 cut(s) 282
HphI GGTGA 1 cut(s) 16
Hpy166II GTNNAC 4 cut(s) 87, 106, 337, 379
Hpy188I TCNGA 1 cut(s) 423
Hpy188III TCNNGA 2 cut(s) 368, 700
Hpy8I GTNNAC 4 cut(s) 87, 106, 337, 379
HpyAV CCTTC 2 cut(s) 682, 742
HpyCH4III ACNGT 1 cut(s) 31
HpyCH4IV ACGT 1 cut(s) 467
HpyCH4V TGCA 3 cut(s) 206, 314, 429
HpyF10VI GCNNNNNNNGC 4 cut(s) 41, 189, 219, 396
HpyF3I CTNAG 1 cut(s) 295
HpySE526I ACGT 1 cut(s) 467
Hsp92II CATG 7 cut(s) 40, 328, 494, 518, 606, 727, 733
Kzo9I GATC 2 cut(s) 94, 408
LmnI GCTCC 3 cut(s) 65, 387, 437
LpnPI CCDG 6 cut(s) 48, 195, 322, 345, 567, 581
Lsp1109I GCAGC 3 cut(s) 218, 545, 590
LweI GCATC 2 cut(s) 12, 222
MaeI CTAG 3 cut(s) 53, 368, 654
MaeII ACGT 1 cut(s) 467
MaeIII GTNAC 5 cut(s) 121, 250, 468, 709, 788
MalI GATC 2 cut(s) 96, 410
MboI GATC 2 cut(s) 94, 408
MboII GAAGA 4 cut(s) 223, 266, 521, 667
MflI RGATCY 1 cut(s) 408
MhlI GDGCHC 2 cut(s) 241, 421
MluCI AATT 3 cut(s) 7, 109, 243
MlyI GAGTC 1 cut(s) 276
MmeI TCCRAC 1 cut(s) 738
MnlI CCTC 4 cut(s) 304, 389, 519, 599
Mph1103I ATGCAT 1 cut(s) 431
MroXI GAANNNNTTC 1 cut(s) 341
MseI TTAA 1 cut(s) 81
MslI CAYNNNNRTG 4 cut(s) 323, 489, 728, 734
MspA1I CMGCKG 1 cut(s) 209
MspCI CTTAAG 1 cut(s) 80
Mva1269I GAATGC 1 cut(s) 314
MwoI GCNNNNNNNGC 4 cut(s) 41, 189, 219, 396
NcoI CCATGG 1 cut(s) 36
NdeI CATATG 1 cut(s) 218
NdeII GATC 2 cut(s) 94, 408
NlaIII CATG 7 cut(s) 40, 328, 494, 518, 606, 727, 733
NlaIV GGNNCC 4 cut(s) 67, 330, 565, 682
NmuCI GTSAC 1 cut(s) 468
NsiI ATGCAT 1 cut(s) 431
NspI RCATGY 1 cut(s) 733
PciI ACATGT 1 cut(s) 729
PctI GAATGC 1 cut(s) 314
PdmI GAANNNNTTC 1 cut(s) 341
PkrI GCNGC 3 cut(s) 208, 535, 580
PleI GAGTC 1 cut(s) 276
PpsI GAGTC 1 cut(s) 276
PscI ACATGT 1 cut(s) 729
PspEI GGTNACC 1 cut(s) 709
PspN4I GGNNCC 4 cut(s) 67, 330, 565, 682
PsuI RGATCY 1 cut(s) 408
PvuII CAGCTG 1 cut(s) 209
RsaI GTAC 2 cut(s) 105, 650
RsaNI GTAC 2 cut(s) 104, 649
RseI CAYNNNNRTG 4 cut(s) 323, 489, 728, 734
SaqAI TTAA 1 cut(s) 81
SatI GCNGC 3 cut(s) 207, 534, 579
Sau3AI GATC 2 cut(s) 94, 408
ScaI AGTACT 1 cut(s) 650
SchI GAGTC 1 cut(s) 276
SduI GDGCHC 2 cut(s) 241, 421
SfaNI GCATC 2 cut(s) 12, 222
SmiMI CAYNNNNRTG 4 cut(s) 323, 489, 728, 734
SmlI CTYRAG 2 cut(s) 80, 700
SmoI CTYRAG 2 cut(s) 80, 700
Sse9I AATT 3 cut(s) 7, 109, 243
SspMI CTAG 3 cut(s) 53, 368, 654
StyI CCWWGG 1 cut(s) 36
TaaI ACNGT 1 cut(s) 31
TaiI ACGT 1 cut(s) 470
TasI AATT 3 cut(s) 7, 109, 243
TatI WGTACW 2 cut(s) 103, 648
Tru1I TTAA 1 cut(s) 81
Tru9I TTAA 1 cut(s) 81
TscAI CASTG 1 cut(s) 241
TseFI GTSAC 1 cut(s) 468
TseI GCWGC 3 cut(s) 206, 533, 578
Tsp45I GTSAC 1 cut(s) 468
TspDTI ATGAA 3 cut(s) 307, 591, 740
TspRI CASTG 1 cut(s) 241
Vha464I CTTAAG 1 cut(s) 80
XbaI TCTAGA 1 cut(s) 367
XceI RCATGY 1 cut(s) 733
XcmI CCANNNNNNNNNTGG 1 cut(s) 703
XmnI GAANNNNTTC 1 cut(s) 341
XspI CTAG 3 cut(s) 53, 368, 654
ZrmI AGTACT 1 cut(s) 650
Zsp2I ATGCAT 1 cut(s) 431
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.