MD14G1063100.v1.1

negative regulation of ubiquitin-protein transferase activity

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr14
Physical Location & Seq
Reverse (-)
6684503 .. 6686860
2358 bp
Loading structure...
UTR
Exon/CDS
Intron
MD14G1063100.v1.1.491

Sequence Viewer

Length: 852 bp
ATGGATTGTGATACAAGTGTTTCCTGGGTCGGGGAATTATGCGTTTTCTTGCGATACTTTTCTTTTATTTTCCCGAGAGAATGTTCCGTTTTCTGGGAAACGAGAGATCGATTGTCAAGACCAGTTGACCTGGCCGCAGCCTATGCTCAGAGGCTGGCCGGCAACCGGAGAGTTTATATTGATCCGCCAGAGCAGACTATTCTAGCCTTTTCTCCTCCGGTGAGACGACCAACAGGCTTGGGGATTCGGGCTACCGGAATTGTTGGTGGTGGACGGCTCCCAAGGAGCATTTTGAGGACTCCCAGAACCGTGACTGGGCGTGGTCGAATCCCATTTAGGTTGTCAACGGTGGACAGAGAGAATACGCCTAGAGGGAGTTCTCACCAGAGAGGGGGCCGAGCTAGTAACAGCGTGTTGCCTTATTGGTACCCAAGATCCCCTCTCCAGGATATCACTGCTGTGGTTAGGGCTATTGAAAGTAGAAGAGCTCGCTTGATTGAGAGCGATGGCCAAAACACTGAGGGTCAAGTTCCACAAGACCAGAATGCCCTTGATCAGTCTCTTCCTGTGTCAGGTGCTCAATTTGATCATGGAGTACCTATGACTCCGTATTCAGCTGTTCGGACCAAGCACTGTCTGCCCCCTTCTGTTGGTAAAGTTCAACAAATTTTAAGGGACGTCAGTAATCAGCCATCTGAAGGAGAATTTCTTACACCACAGAAGAAACTAATGAACTCAATTGACATGGTGGAGAAAGTGGTCAGGAAAGAACTTGAGAGGCTGAAGAGAACGCCTAGCTCAAAGAAGGCTGAGAGGGAGCAAAAAGTCCGAACTCTGATGTCAATGCGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000278 GO:0000280 GO:0000902 GO:0000904 GO:0002831 GO:0002833 GO:0003006 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006725 GO:0006807 GO:0006996 GO:0007049 GO:0007088 GO:0007113 GO:0007127 GO:0007135 GO:0007275 GO:0007346 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009314 GO:0009411 GO:0009416 GO:0009553 GO:0009561 GO:0009628 GO:0009653 GO:0009791 GO:0009888 GO:0009892 GO:0009960 GO:0009987 GO:0010026 GO:0010090 GO:0010091 GO:0010154 GO:0010224 GO:0010564 GO:0010605 GO:0016043 GO:0019222 GO:0022402 GO:0022414 GO:0030154 GO:0031323 GO:0031324 GO:0031347 GO:0031349 GO:0031396 GO:0031397 GO:0031399 GO:0031400 GO:0032101 GO:0032103 GO:0032268 GO:0032269 GO:0032501 GO:0032502 GO:0032989 GO:0033043 GO:0034641 GO:0034645 GO:0040020 GO:0042023 GO:0043086 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043900 GO:0043902 GO:0044092 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044424 GO:0044464 GO:0044786 GO:0046483 GO:0048229 GO:0048285 GO:0048316 GO:0048468 GO:0048518 GO:0048519 GO:0048523 GO:0048583 GO:0048584 GO:0048608 GO:0048731 GO:0048856 GO:0048869 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051128 GO:0051171 GO:0051172 GO:0051246 GO:0051248 GO:0051321 GO:0051338 GO:0051348 GO:0051438 GO:0051444 GO:0051445 GO:0051726 GO:0051783 GO:0060255 GO:0061458 GO:0061982 GO:0061983 GO:0065007 GO:0065009 GO:0071704 GO:0071840 GO:0080090 GO:0080134 GO:0090304 GO:0090558 GO:0090626 GO:0140013 GO:1900424 GO:1900426 GO:1901360 GO:1901576 GO:1903046 GO:1903320 GO:1903321 GO:1904666 GO:1904667 GO:2000241
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

284

Amino Acids

31.9

Weight (kDa)

10.38

Isoelectric Point (pI)

50.95

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 681
Acc65I GGTACC 1 cut(s) 426
AccB1I GGYRCC 1 cut(s) 426
AciI CCGC 2 cut(s) 135, 185
AclWI GGATC 2 cut(s) 176, 429
AcoI YGGCCR 3 cut(s) 132, 156, 508
AcsI RAATTY 2 cut(s) 666, 704
AcuI CTGAAG 2 cut(s) 717, 803
AcyI GRCGYC 1 cut(s) 678
AfaI GTAC 2 cut(s) 428, 597
AfiI CCNNNNNNNGG 9 cut(s) 30, 93, 165, 315, 391, 445, 572, 650, 698
AgsI TTSAA 2 cut(s) 476, 662
AjnI CCWGG 3 cut(s) 23, 129, 444
AleI CACNNNNGTG 1 cut(s) 458
AluBI AGCT 4 cut(s) 401, 488, 617, 798
AluI AGCT 4 cut(s) 401, 488, 617, 798
Alw21I GWGCWC 2 cut(s) 490, 580
Alw26I GTCTC 2 cut(s) 217, 564
AlwI GGATC 2 cut(s) 176, 429
AlwNI CAGNNNCTG 1 cut(s) 154
Ama87I CYCGRG 1 cut(s) 73
AoxI GGCC 4 cut(s) 132, 156, 394, 508
ApeKI GCWGC 1 cut(s) 137
ApoI RAATTY 2 cut(s) 666, 704
Asp718I GGTACC 1 cut(s) 426
AspLEI GCGC 1 cut(s) 849
AspS9I GGNCC 2 cut(s) 394, 624
AsuHPI GGTGA 2 cut(s) 232, 374
AvaI CYCGRG 1 cut(s) 73
AvaII GGWCC 1 cut(s) 624
BaeI ACNNNNGTAYC 1 cut(s) 36
BalI TGGCCA 1 cut(s) 510
BanI GGYRCC 1 cut(s) 426
BanII GRGCYC 1 cut(s) 490
Bbv12I GWGCWC 2 cut(s) 490, 580
BbvI GCAGC 1 cut(s) 149
BccI CCATC 2 cut(s) 500, 700
BceAI ACGGC 1 cut(s) 290
BciT130I CCWGG 3 cut(s) 25, 131, 446
BclI TGATCA 2 cut(s) 553, 586
BcoDI GTCTC 2 cut(s) 217, 564
BfaI CTAG 4 cut(s) 203, 369, 402, 795
BisI GCNGC 2 cut(s) 135, 138
BlsI GCNGC 2 cut(s) 136, 139
Bme1390I CCNGG 3 cut(s) 25, 131, 446
Bme18I GGWCC 1 cut(s) 624
BmeT110I CYCGRG 1 cut(s) 73
BmgT120I GGNCC 2 cut(s) 394, 624
BmiI GGNNCC 3 cut(s) 278, 395, 428
BmrFI CCNGG 3 cut(s) 25, 131, 446
BmrI ACTGGG 1 cut(s) 324
BmuI ACTGGG 1 cut(s) 324
BpmI CTGGAG 1 cut(s) 428
BpuEI CTTGAG 1 cut(s) 794
Bsa29I ATCGAT 1 cut(s) 109
BsaHI GRCGYC 1 cut(s) 678
BsaJI CCNNGG 2 cut(s) 24, 281
BsaWI WCCGGW 3 cut(s) 165, 217, 254
Bsc4I CCNNNNNNNGG 9 cut(s) 30, 93, 165, 315, 391, 445, 572, 650, 698
Bse118I RCCGGY 1 cut(s) 158
Bse1I ACTGG 2 cut(s) 122, 319
BseBI CCWGG 3 cut(s) 25, 131, 446
BseCI ATCGAT 1 cut(s) 109
BseDI CCNNGG 2 cut(s) 24, 281
BseLI CCNNNNNNNGG 9 cut(s) 30, 93, 165, 315, 391, 445, 572, 650, 698
BseMII CTCAG 3 cut(s) 161, 510, 801
BseNI ACTGG 2 cut(s) 122, 319
BseRI GAGGAG 1 cut(s) 204
BseXI GCAGC 1 cut(s) 149
BshFI GGCC 4 cut(s) 134, 158, 396, 510
BshNI GGYRCC 1 cut(s) 426
BshVI ATCGAT 1 cut(s) 109
BsiHKAI GWGCWC 2 cut(s) 490, 580
BsiHKCI CYCGRG 1 cut(s) 73
BsiSI CCGG 4 cut(s) 159, 166, 218, 255
BslFI GGGAC 1 cut(s) 689
BslI CCNNNNNNNGG 9 cut(s) 30, 93, 165, 315, 391, 445, 572, 650, 698
BsmAI GTCTC 2 cut(s) 217, 564
BsmBI CGTCTC 1 cut(s) 217
BsmFI GGGAC 1 cut(s) 689
BsmI GAATGC 1 cut(s) 550
BsnI GGCC 4 cut(s) 134, 158, 396, 510
BsoBI CYCGRG 1 cut(s) 73
Bsp1286I GDGCHC 2 cut(s) 490, 580
Bsp143I GATC 5 cut(s) 106, 181, 434, 553, 586
BspACI CCGC 2 cut(s) 135, 185
BspANI GGCC 4 cut(s) 134, 158, 396, 510
BspCNI CTCAG 3 cut(s) 160, 511, 802
BspDI ATCGAT 1 cut(s) 109
BspLI GGNNCC 3 cut(s) 278, 395, 428
BspPI GGATC 2 cut(s) 176, 429
BspQI GCTCTTC 1 cut(s) 478
BspT107I GGYRCC 1 cut(s) 426
BsrFI RCCGGY 1 cut(s) 158
BsrI ACTGG 2 cut(s) 122, 319
BssAI RCCGGY 1 cut(s) 158
BssECI CCNNGG 2 cut(s) 24, 281
BssMI GATC 5 cut(s) 106, 181, 434, 553, 586
BssNI GRCGYC 1 cut(s) 678
BssT1I CCWWGG 1 cut(s) 281
Bst2UI CCWGG 3 cut(s) 25, 131, 446
Bst4CI ACNGT 3 cut(s) 310, 349, 635
Bst6I CTCTTC 3 cut(s) 478, 567, 779
BstACI GRCGYC 1 cut(s) 678
BstAPI GCANNNNNTGC 2 cut(s) 143, 637
BstC8I GCNNGC 3 cut(s) 156, 160, 490
BstDEI CTNAG 3 cut(s) 147, 519, 810
BstENI CCTNNNNNAGG 1 cut(s) 570
BstHHI GCGC 1 cut(s) 849
BstKTI GATC 5 cut(s) 109, 184, 437, 556, 589
BstMAI GTCTC 2 cut(s) 217, 564
BstMBI GATC 5 cut(s) 106, 181, 434, 553, 586
BstMWI GCNNNNNNNGC 2 cut(s) 143, 637
BstNI CCWGG 3 cut(s) 25, 131, 446
BstSCI CCNGG 3 cut(s) 23, 129, 444
BstV1I GCAGC 1 cut(s) 149
BstX2I RGATCY 1 cut(s) 434
BstYI RGATCY 1 cut(s) 434
Bsu15I ATCGAT 1 cut(s) 109
BsuRI GGCC 4 cut(s) 134, 158, 396, 510
BsuTUI ATCGAT 1 cut(s) 109
BtgZI GCGATG 1 cut(s) 519
BtsI GCAGTG 1 cut(s) 453
BtsIMutI CAGTG 3 cut(s) 453, 516, 631
Cac8I GCNNGC 3 cut(s) 156, 160, 490
CaiI CAGNNNCTG 1 cut(s) 154
CfoI GCGC 1 cut(s) 849
Cfr10I RCCGGY 1 cut(s) 158
Cfr13I GGNCC 2 cut(s) 394, 624
ClaI ATCGAT 1 cut(s) 109
Csp6I GTAC 2 cut(s) 427, 596
CviAII CATG 2 cut(s) 590, 745
CviQI GTAC 2 cut(s) 427, 596
DdeI CTNAG 3 cut(s) 147, 519, 810
DpnI GATC 5 cut(s) 108, 183, 436, 555, 588
DpnII GATC 5 cut(s) 106, 181, 434, 553, 586
EaeI YGGCCR 3 cut(s) 132, 156, 508
Eam1104I CTCTTC 3 cut(s) 478, 567, 779
EarI CTCTTC 3 cut(s) 478, 567, 779
EciI GGCGGA 1 cut(s) 174
Ecl136II GAGCTC 1 cut(s) 488
Eco130I CCWWGG 1 cut(s) 281
Eco24I GRGCYC 1 cut(s) 490
Eco32I GATATC 1 cut(s) 451
Eco47I GGWCC 1 cut(s) 624
Eco53kI GAGCTC 1 cut(s) 488
Eco57I CTGAAG 2 cut(s) 717, 803
Eco88I CYCGRG 1 cut(s) 73
EcoICRI GAGCTC 1 cut(s) 488
EcoNI CCTNNNNNAGG 1 cut(s) 570
EcoRII CCWGG 3 cut(s) 23, 129, 444
EcoRV GATATC 1 cut(s) 451
EcoT14I CCWWGG 1 cut(s) 281
EcoT38I GRGCYC 1 cut(s) 490
ErhI CCWWGG 1 cut(s) 281
Esp3I CGTCTC 1 cut(s) 217
FaeI CATG 2 cut(s) 593, 748
FaiI YATR 6 cut(s) 40, 144, 177, 591, 602, 746
FaqI GGGAC 1 cut(s) 689
FatI CATG 2 cut(s) 589, 744
FbaI TGATCA 2 cut(s) 553, 586
Fnu4HI GCNGC 2 cut(s) 135, 138
FriOI GRGCYC 1 cut(s) 490
Fsp4HI GCNGC 2 cut(s) 135, 138
FspBI CTAG 4 cut(s) 203, 369, 402, 795
GlaI GCGC 1 cut(s) 848
GluI GCNGC 2 cut(s) 135, 138
GsuI CTGGAG 1 cut(s) 428
HaeIII GGCC 4 cut(s) 134, 158, 396, 510
HapII CCGG 4 cut(s) 159, 166, 218, 255
HhaI GCGC 1 cut(s) 849
Hin1I GRCGYC 1 cut(s) 678
Hin1II CATG 2 cut(s) 593, 748
Hin6I GCGC 1 cut(s) 847
HinP1I GCGC 1 cut(s) 847
HincII GTYRAC 2 cut(s) 127, 345
HindII GTYRAC 2 cut(s) 127, 345
HinfI GANTC 4 cut(s) 244, 298, 327, 604
HpaII CCGG 4 cut(s) 159, 166, 218, 255
HphI GGTGA 2 cut(s) 232, 374
Hpy166II GTNNAC 4 cut(s) 127, 272, 345, 352
Hpy188I TCNGA 5 cut(s) 150, 624, 697, 830, 837
Hpy188III TCNNGA 3 cut(s) 73, 117, 763
Hpy8I GTNNAC 4 cut(s) 127, 272, 345, 352
HpyAV CCTTC 3 cut(s) 654, 692, 799
HpyCH4III ACNGT 3 cut(s) 310, 349, 635
HpyCH4IV ACGT 1 cut(s) 678
HpyF10VI GCNNNNNNNGC 2 cut(s) 143, 637
HpyF3I CTNAG 3 cut(s) 147, 519, 810
HpySE526I ACGT 1 cut(s) 678
Hsp92I GRCGYC 1 cut(s) 678
Hsp92II CATG 2 cut(s) 593, 748
HspAI GCGC 1 cut(s) 847
KpnI GGTACC 1 cut(s) 430
KroI GCCGGC 1 cut(s) 158
KroNI GCCGGC 1 cut(s) 160
Ksp22I TGATCA 2 cut(s) 553, 586
Kzo9I GATC 5 cut(s) 106, 181, 434, 553, 586
LguI GCTCTTC 1 cut(s) 478
LmnI GCTCC 3 cut(s) 282, 285, 817
Lsp1109I GCAGC 1 cut(s) 149
MaeI CTAG 4 cut(s) 203, 369, 402, 795
MaeII ACGT 1 cut(s) 678
MaeIII GTNAC 2 cut(s) 310, 404
MalI GATC 5 cut(s) 108, 183, 436, 555, 588
MboI GATC 5 cut(s) 106, 181, 434, 553, 586
MboII GAAGA 4 cut(s) 495, 554, 733, 796
MfeI CAATTG 1 cut(s) 738
MflI RGATCY 1 cut(s) 434
MhlI GDGCHC 2 cut(s) 490, 580
MlsI TGGCCA 1 cut(s) 510
MluCI AATT 6 cut(s) 35, 258, 581, 666, 704, 738
MluNI TGGCCA 1 cut(s) 510
MlyI GAGTC 2 cut(s) 292, 598
MnlI CCTC 9 cut(s) 144, 225, 288, 365, 383, 450, 514, 771, 807
Mox20I TGGCCA 1 cut(s) 510
MroNI GCCGGC 1 cut(s) 158
MscI TGGCCA 1 cut(s) 510
MseI TTAA 1 cut(s) 671
MslI CAYNNNNRTG 1 cut(s) 458
Msp20I TGGCCA 1 cut(s) 510
MspA1I CMGCKG 1 cut(s) 617
MspI CCGG 4 cut(s) 159, 166, 218, 255
MspR9I CCNGG 3 cut(s) 25, 131, 446
MunI CAATTG 1 cut(s) 738
Mva1269I GAATGC 1 cut(s) 550
MvaI CCWGG 3 cut(s) 25, 131, 446
MwoI GCNNNNNNNGC 2 cut(s) 143, 637
NaeI GCCGGC 1 cut(s) 160
NdeII GATC 5 cut(s) 106, 181, 434, 553, 586
NgoMIV GCCGGC 1 cut(s) 158
NlaIII CATG 2 cut(s) 593, 748
NlaIV GGNNCC 3 cut(s) 278, 395, 428
NmeAIII GCCGAG 1 cut(s) 422
NmuCI GTSAC 1 cut(s) 310
OliI CACNNNNGTG 1 cut(s) 458
PciSI GCTCTTC 1 cut(s) 478
PctI GAATGC 1 cut(s) 550
PdiI GCCGGC 1 cut(s) 160
PfeI GAWTC 2 cut(s) 244, 327
PfoI TCCNGGA 1 cut(s) 444
PkrI GCNGC 2 cut(s) 136, 139
PleI GAGTC 2 cut(s) 292, 598
PpsI GAGTC 2 cut(s) 292, 598
Psp124BI GAGCTC 1 cut(s) 490
Psp6I CCWGG 3 cut(s) 23, 129, 444
PspGI CCWGG 3 cut(s) 23, 129, 444
PspN4I GGNNCC 3 cut(s) 278, 395, 428
PspPI GGNCC 2 cut(s) 394, 624
PstNI CAGNNNCTG 1 cut(s) 154
PsuI RGATCY 1 cut(s) 434
PvuII CAGCTG 1 cut(s) 617
RsaI GTAC 2 cut(s) 428, 597
RsaNI GTAC 2 cut(s) 427, 596
RseI CAYNNNNRTG 1 cut(s) 458
SacI GAGCTC 1 cut(s) 490
SapI GCTCTTC 1 cut(s) 478
SaqAI TTAA 1 cut(s) 671
SatI GCNGC 2 cut(s) 135, 138
Sau3AI GATC 5 cut(s) 106, 181, 434, 553, 586
Sau96I GGNCC 2 cut(s) 394, 624
SchI GAGTC 2 cut(s) 292, 598
ScrFI CCNGG 3 cut(s) 25, 131, 446
SduI GDGCHC 2 cut(s) 490, 580
SetI ASST 9 cut(s) 132, 341, 403, 490, 577, 601, 619, 681, 800
SinI GGWCC 1 cut(s) 624
SmiMI CAYNNNNRTG 1 cut(s) 458
SmlI CTYRAG 1 cut(s) 773
SmoI CTYRAG 1 cut(s) 773
Sse9I AATT 6 cut(s) 35, 258, 581, 666, 704, 738
SsiI CCGC 2 cut(s) 135, 185
SspMI CTAG 4 cut(s) 203, 369, 402, 795
SstI GAGCTC 1 cut(s) 490
StyD4I CCNGG 3 cut(s) 23, 129, 444
StyI CCWWGG 1 cut(s) 281
TaaI ACNGT 3 cut(s) 310, 349, 635
TaiI ACGT 1 cut(s) 681
TaqI TCGA 2 cut(s) 109, 325
TasI AATT 6 cut(s) 35, 258, 581, 666, 704, 738
TauI GCSGC 1 cut(s) 137
TfiI GAWTC 2 cut(s) 244, 327
Tru1I TTAA 1 cut(s) 671
Tru9I TTAA 1 cut(s) 671
TscAI CASTG 3 cut(s) 460, 523, 638
TseFI GTSAC 1 cut(s) 310
TseI GCWGC 1 cut(s) 137
Tsp45I GTSAC 1 cut(s) 310
TspDTI ATGAA 1 cut(s) 746
TspGWI ACGGA 2 cut(s) 76, 597
TspRI CASTG 3 cut(s) 460, 523, 638
VpaK11BI GGWCC 1 cut(s) 624
XagI CCTNNNNNAGG 1 cut(s) 570
XapI RAATTY 2 cut(s) 666, 704
XspI CTAG 4 cut(s) 203, 369, 402, 795
ZraI GACGTC 1 cut(s) 679
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.