Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0001662

Physical Location & Seq

Genomic Coordinates Forward (+)

10912265 .. 10914822

Gene Structure 2558 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G071700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 789 bp

ATGGCCGAAGCAAGAGATAGACTGTCAAGGCCGTCTGTTGATCTCGCAGACACCTATGCTCAATGGCTATCGCGCAATCGCAGTATATACATAGATCCGCCAGAGCAGGTTCTTCAGGTTGTTCCAGACTTGTCGAGAACGCCAGCGAGACAGAGAGCCCCAACAGCATTAGGGTTTGGGGCCACCGGAGTTGTTGGTGGTGGAGGGCTCCTGAGGAGCAGTTTGAGGACTCCGAGGACCGGAAATGGGCGTGGTCGGATCCCATTTGGGTTTACGACACCGGCCAGAGAGAACACGCCCCCGGCCGGGAGTTCTCGCCGGAGAAGGGGCAGATCCAGTAACAGCGTGTTACCTTCTTGGTACCCAAGAACCCCTCTCCAGGATATCAGTGCTGTTGTGAGGGCCATTGAAAGAAGAAGAGCACGCTTGGCTGAGAACGATGGCCAACACACTGAGGGTCAAGTTCCACAGGGCCGGAATATCCTCGATCAGTATCTGCTAGTGCCAGGTGCTCAACTTGAGCATGGTGTTCCTGTTACTCCATATTCAGCTGTTCGAACCAAGCAATGCCCACCTCCTTCCATTGGTAGAGTACAGAAAATTATAAGGGAAGCCACTAACACTCAGACTGCTGAAGGAGAATTTCTTACACCACAGAAGAAACTATTGAACTCAATTGACACGGTTGAGAAAGTGGTGATGGAAGAACTTCAGAGGCTGAAGAGGACCCCAAGTGCTAAGAAGGCTGAGAGAGAGAAAAGAGTTCGAACTTTGATGTCAATGCGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000278 GO:0000280 GO:0000902 GO:0000904 GO:0002831 GO:0002833 GO:0003006 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006725 GO:0006807 GO:0006996 GO:0007049 GO:0007088 GO:0007113 GO:0007127 GO:0007135 GO:0007275 GO:0007346 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009314 GO:0009411 GO:0009416 GO:0009553 GO:0009561 GO:0009628 GO:0009653 GO:0009791 GO:0009888 GO:0009892 GO:0009960 GO:0009987 GO:0010026 GO:0010090 GO:0010091 GO:0010154 GO:0010224 GO:0010564 GO:0010605 GO:0016043 GO:0019222 GO:0022402 GO:0022414 GO:0030154 GO:0031323 GO:0031324 GO:0031347 GO:0031349 GO:0031396 GO:0031397 GO:0031399 GO:0031400 GO:0032101 GO:0032103 GO:0032268 GO:0032269 GO:0032501 GO:0032502 GO:0032989 GO:0033043 GO:0034641 GO:0034645 GO:0040020 GO:0042023 GO:0043086 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043900 GO:0043902 GO:0044092 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044424 GO:0044464 GO:0044786 GO:0046483 GO:0048229 GO:0048285 GO:0048316 GO:0048468 GO:0048518 GO:0048519 GO:0048523 GO:0048583 GO:0048584 GO:0048608 GO:0048731 GO:0048856 GO:0048869 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051128 GO:0051171 GO:0051172 GO:0051246 GO:0051248 GO:0051321 GO:0051338 GO:0051348 GO:0051438 GO:0051444 GO:0051445 GO:0051726 GO:0051783 GO:0060255 GO:0061458 GO:0061982 GO:0061983 GO:0065007 GO:0065009 GO:0071704 GO:0071840 GO:0080090 GO:0080134 GO:0090304 GO:0090558 GO:0090626 GO:0140013 GO:1900424 GO:1900426 GO:1901360 GO:1901576 GO:1903046 GO:1903320 GO:1903321 GO:1904666 GO:1904667 GO:2000241

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

263

Amino Acids

29.1

Weight (kDa)

11.2

Isoelectric Point (pI)

59.27

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001662)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G42260 AT2G42260 AT3G57860
fragaria_vesca	FvH4_1g24920 FvH4_6g18600
malus_domestica	MD12G1062400.v1.1 MD14G1063100.v1.1
prunus_persica	Prupe.7G071700_v2.0.a1
pyrus_communis	pycom14g05090
rosa_chinensis	RchiOBHm_Chr3g0473161 RchiOBHm_Chr3g0473181 RchiOBHm_Chr7g0219161
rosa_laevigata	RLG00000002322 RLG00000002349 RLG00000002350 RLG00000015134 RLG00000024022 RLG00000024024
rosa_multiflora	Rmu_sc0001539.1_g000007 Rmu_sc0003069.1_g000059 Rmu_sc0003069.1_g000060 Rmu_sc0039741.1_g000001 Rmu_sc0040292.1_g000002
rosa_roxburghii	Rroxscaffold_3G00240460 Rroxscaffold_6G00408240 Rroxscaffold_6G00408260
rosa_rugosa	Rorug03G0131900 Rorug03G0132000 Rorug03G0132100 Rorug07G0183500
rosa_samantha	Rh3AG183500 Rh3AG183700 Rh3BG209900 Rh3BG210200 Rh3CG207000 Rh3CG207300 Rh3DG207100 Rh3DG207300 Rh7AG325800 Rh7AG326200 Rh7CG342900 Rh7CG343200 Rh7DG321500
rosa_wichuraiana	Rw0G008100 Rw0G008120 Rw0G014730 Rw0G014750 Rw0G019040 Rw7G028360

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	605
Acc36I	ACCTGC	1 cut(s)	97
Acc65I	GGTACC	1 cut(s)	360
AccB1I	GGYRCC	1 cut(s)	360
AccII	CGCG	1 cut(s)	73
AciI	CCGC	1 cut(s)	98
AclWI	GGATC	4 cut(s)	89, 253, 266, 327
AcoI	YGGCCR	4 cut(s)	3, 282, 303, 442
AcsI	RAATTY	1 cut(s)	641
AcuI	CTGAAG	4 cut(s)	98, 654, 695, 740
AfaI	GTAC	2 cut(s)	362, 594
AfiI	CCNNNNNNNGG	7 cut(s)	239, 246, 305, 306, 325, 379, 584
AgsI	TTSAA	2 cut(s)	410, 670
AjnI	CCWGG	2 cut(s)	378, 505
AluBI	AGCT	1 cut(s)	551
AluI	AGCT	1 cut(s)	551
Alw21I	GWGCWC	2 cut(s)	424, 514
Alw26I	GTCTC	1 cut(s)	142
AlwI	GGATC	4 cut(s)	89, 253, 266, 327
AlwNI	CAGNNNCTG	2 cut(s)	496, 718
AoxI	GGCC	8 cut(s)	3, 29, 180, 282, 303, 402, 442, 472
ApoI	RAATTY	1 cut(s)	641
Asp700I	GAANNNNTTC	1 cut(s)	708
Asp718I	GGTACC	1 cut(s)	360
AspLEI	GCGC	1 cut(s)	75
AspS9I	GGNCC	5 cut(s)	180, 237, 402, 472, 726
AsuC2I	CCSGG	2 cut(s)	302, 307
AsuHPI	GGTGA	1 cut(s)	709
AsuII	TTCGAA	2 cut(s)	556, 766
AvaII	GGWCC	2 cut(s)	237, 726
AxyI	CCTNAGG	1 cut(s)	212
BalI	TGGCCA	1 cut(s)	444
BamHI	GGATCC	1 cut(s)	258
BanI	GGYRCC	1 cut(s)	360
BanII	GRGCYC	2 cut(s)	160, 210
Bbv12I	GWGCWC	2 cut(s)	424, 514
BccI	CCATC	2 cut(s)	434, 694
BceAI	ACGGC	1 cut(s)	16
BciT130I	CCWGG	2 cut(s)	380, 507
BcnI	CCSGG	2 cut(s)	302, 307
BcoDI	GTCTC	1 cut(s)	142
BfaI	CTAG	1 cut(s)	500
BfuAI	ACCTGC	1 cut(s)	97
Bme1390I	CCNGG	4 cut(s)	302, 307, 380, 507
Bme18I	GGWCC	2 cut(s)	237, 726
BmgT120I	GGNCC	5 cut(s)	180, 237, 402, 472, 726
BmiI	GGNNCC	5 cut(s)	181, 209, 260, 362, 728
BmrFI	CCNGG	4 cut(s)	302, 307, 380, 507
BpmI	CTGGAG	1 cut(s)	362
Bpu14I	TTCGAA	2 cut(s)	556, 766
BpuEI	CTTGAG	1 cut(s)	539
BpuMI	CCSGG	2 cut(s)	302, 307
BsaBI	GATNNNNATC	1 cut(s)	492
BsaJI	CCNNGG	2 cut(s)	233, 300
BsaWI	WCCGGW	2 cut(s)	185, 239
Bsc4I	CCNNNNNNNGG	7 cut(s)	239, 246, 305, 306, 325, 379, 584
Bse118I	RCCGGY	1 cut(s)	280
Bse1I	ACTGG	1 cut(s)	336
Bse21I	CCTNAGG	1 cut(s)	212
Bse3DI	GCAATG	1 cut(s)	572
Bse8I	GATNNNNATC	1 cut(s)	492
BseBI	CCWGG	2 cut(s)	380, 507
BseDI	CCNNGG	2 cut(s)	233, 300
BseJI	GATNNNNATC	1 cut(s)	492
BseLI	CCNNNNNNNGG	7 cut(s)	239, 246, 305, 306, 325, 379, 584
BseMI	GCAATG	1 cut(s)	572
BseMII	CTCAG	5 cut(s)	203, 423, 444, 638, 738
BseNI	ACTGG	1 cut(s)	336
BseRI	GAGGAG	1 cut(s)	229
BseX3I	CGGCCG	1 cut(s)	303
Bsh1236I	CGCG	1 cut(s)	73
Bsh1285I	CGRYCG	1 cut(s)	306
BshFI	GGCC	8 cut(s)	5, 31, 182, 284, 305, 404, 444, 474
BshNI	GGYRCC	1 cut(s)	360
BsiEI	CGRYCG	1 cut(s)	306
BsiHKAI	GWGCWC	2 cut(s)	424, 514
BsiSI	CCGG	7 cut(s)	186, 240, 281, 302, 306, 319, 475
BslI	CCNNNNNNNGG	7 cut(s)	239, 246, 305, 306, 325, 379, 584
BsmAI	GTCTC	1 cut(s)	142
BsnI	GGCC	8 cut(s)	5, 31, 182, 284, 305, 404, 444, 474
Bsp119I	TTCGAA	2 cut(s)	556, 766
Bsp1286I	GDGCHC	4 cut(s)	160, 210, 424, 514
Bsp143I	GATC	5 cut(s)	40, 94, 258, 332, 487
BspACI	CCGC	1 cut(s)	98
BspANI	GGCC	8 cut(s)	5, 31, 182, 284, 305, 404, 444, 474
BspCNI	CTCAG	5 cut(s)	204, 424, 445, 637, 739
BspFNI	CGCG	1 cut(s)	73
BspLI	GGNNCC	5 cut(s)	181, 209, 260, 362, 728
BspMI	ACCTGC	1 cut(s)	97
BspPI	GGATC	4 cut(s)	89, 253, 266, 327
BspQI	GCTCTTC	1 cut(s)	412
BspT104I	TTCGAA	2 cut(s)	556, 766
BspT107I	GGYRCC	1 cut(s)	360
BsrDI	GCAATG	1 cut(s)	572
BsrFI	RCCGGY	1 cut(s)	280
BsrI	ACTGG	1 cut(s)	336
BssAI	RCCGGY	1 cut(s)	280
BssECI	CCNNGG	2 cut(s)	233, 300
BssMI	GATC	5 cut(s)	40, 94, 258, 332, 487
Bst2UI	CCWGG	2 cut(s)	380, 507
Bst4CI	ACNGT	2 cut(s)	24, 685
Bst6I	CTCTTC	2 cut(s)	412, 716
BstBI	TTCGAA	2 cut(s)	556, 766
BstC8I	GCNNGC	2 cut(s)	144, 424
BstDEI	CTNAG	6 cut(s)	212, 432, 453, 624, 738, 747
BstFNI	CGCG	1 cut(s)	73
BstHHI	GCGC	1 cut(s)	75
BstKTI	GATC	5 cut(s)	43, 97, 261, 335, 490
BstMAI	GTCTC	1 cut(s)	142
BstMBI	GATC	5 cut(s)	40, 94, 258, 332, 487
BstMCI	CGRYCG	1 cut(s)	306
BstMWI	GCNNNNNNNGC	3 cut(s)	164, 428, 743
BstNI	CCWGG	2 cut(s)	380, 507
BstSCI	CCNGG	4 cut(s)	300, 305, 378, 505
BstUI	CGCG	1 cut(s)	73
BstX2I	RGATCY	3 cut(s)	94, 258, 332
BstYI	RGATCY	3 cut(s)	94, 258, 332
BstZI	CGGCCG	1 cut(s)	303
Bsu36I	CCTNAGG	1 cut(s)	212
BsuRI	GGCC	8 cut(s)	5, 31, 182, 284, 305, 404, 444, 474
BtsIMutI	CAGTG	2 cut(s)	394, 450
BveI	ACCTGC	1 cut(s)	97
Cac8I	GCNNGC	2 cut(s)	144, 424
CaiI	CAGNNNCTG	2 cut(s)	496, 718
CfoI	GCGC	1 cut(s)	75
Cfr10I	RCCGGY	1 cut(s)	280
Cfr13I	GGNCC	5 cut(s)	180, 237, 402, 472, 726
Csp6I	GTAC	2 cut(s)	361, 593
CspCI	CAANNNNNGTGG	2 cut(s)	172, 207
CviAII	CATG	1 cut(s)	524
CviQI	GTAC	2 cut(s)	361, 593
DdeI	CTNAG	6 cut(s)	212, 432, 453, 624, 738, 747
DpnI	GATC	5 cut(s)	42, 96, 260, 334, 489
DpnII	GATC	5 cut(s)	40, 94, 258, 332, 487
EaeI	YGGCCR	4 cut(s)	3, 282, 303, 442
EagI	CGGCCG	1 cut(s)	303
Eam1104I	CTCTTC	2 cut(s)	412, 716
EarI	CTCTTC	2 cut(s)	412, 716
EciI	GGCGGA	1 cut(s)	87
EclXI	CGGCCG	1 cut(s)	303
Eco24I	GRGCYC	2 cut(s)	160, 210
Eco32I	GATATC	1 cut(s)	385
Eco47I	GGWCC	2 cut(s)	237, 726
Eco52I	CGGCCG	1 cut(s)	303
Eco57I	CTGAAG	4 cut(s)	98, 654, 695, 740
Eco81I	CCTNAGG	1 cut(s)	212
EcoO109I	RGGNCCY	1 cut(s)	726
EcoRII	CCWGG	2 cut(s)	378, 505
EcoRV	GATATC	1 cut(s)	385
EcoT38I	GRGCYC	2 cut(s)	160, 210
FaeI	CATG	1 cut(s)	527
FaiI	YATR	7 cut(s)	57, 86, 88, 92, 525, 544, 605
FatI	CATG	1 cut(s)	523
FriOI	GRGCYC	2 cut(s)	160, 210
FspBI	CTAG	1 cut(s)	500
GlaI	GCGC	1 cut(s)	74
GsuI	CTGGAG	1 cut(s)	362
HaeIII	GGCC	8 cut(s)	5, 31, 182, 284, 305, 404, 444, 474
HapII	CCGG	7 cut(s)	186, 240, 281, 302, 306, 319, 475
HhaI	GCGC	1 cut(s)	75
Hin1II	CATG	1 cut(s)	527
Hin6I	GCGC	1 cut(s)	73
HinP1I	GCGC	1 cut(s)	73
HinfI	GANTC	1 cut(s)	229
HpaII	CCGG	7 cut(s)	186, 240, 281, 302, 306, 319, 475
HphI	GGTGA	1 cut(s)	709
Hpy166II	GTNNAC	1 cut(s)	273
Hpy188I	TCNGA	4 cut(s)	234, 258, 627, 714
Hpy188III	TCNNGA	3 cut(s)	125, 135, 211
Hpy8I	GTNNAC	1 cut(s)	273
HpyAV	CCTTC	5 cut(s)	318, 363, 588, 629, 736
HpyCH4III	ACNGT	2 cut(s)	24, 685
HpyF10VI	GCNNNNNNNGC	3 cut(s)	164, 428, 743
HpyF3I	CTNAG	6 cut(s)	212, 432, 453, 624, 738, 747
Hsp92II	CATG	1 cut(s)	527
HspAI	GCGC	1 cut(s)	73
KpnI	GGTACC	1 cut(s)	364
Kzo9I	GATC	5 cut(s)	40, 94, 258, 332, 487
LguI	GCTCTTC	1 cut(s)	412
LmnI	GCTCC	2 cut(s)	213, 216
MaeI	CTAG	1 cut(s)	500
MaeIII	GTNAC	3 cut(s)	338, 348, 535
MalI	GATC	5 cut(s)	42, 96, 260, 334, 489
MboI	GATC	5 cut(s)	40, 94, 258, 332, 487
MboII	GAAGA	6 cut(s)	104, 426, 429, 670, 716, 733
MfeI	CAATTG	1 cut(s)	675
MflI	RGATCY	3 cut(s)	94, 258, 332
MhlI	GDGCHC	4 cut(s)	160, 210, 424, 514
MlsI	TGGCCA	1 cut(s)	444
MluCI	AATT	3 cut(s)	600, 641, 675
MluNI	TGGCCA	1 cut(s)	444
MlyI	GAGTC	1 cut(s)	223
MmeI	TCCRAC	1 cut(s)	236
Mox20I	TGGCCA	1 cut(s)	444
MroXI	GAANNNNTTC	1 cut(s)	708
MscI	TGGCCA	1 cut(s)	444
Msp20I	TGGCCA	1 cut(s)	444
MspA1I	CMGCKG	1 cut(s)	551
MspI	CCGG	7 cut(s)	186, 240, 281, 302, 306, 319, 475
MspR9I	CCNGG	4 cut(s)	302, 307, 380, 507
MunI	CAATTG	1 cut(s)	675
MvaI	CCWGG	2 cut(s)	380, 507
MvnI	CGCG	1 cut(s)	73
MwoI	GCNNNNNNNGC	3 cut(s)	164, 428, 743
NciI	CCSGG	2 cut(s)	302, 307
NdeII	GATC	5 cut(s)	40, 94, 258, 332, 487
NlaIII	CATG	1 cut(s)	527
NlaIV	GGNNCC	5 cut(s)	181, 209, 260, 362, 728
NspV	TTCGAA	2 cut(s)	556, 766
PciSI	GCTCTTC	1 cut(s)	412
PdmI	GAANNNNTTC	1 cut(s)	708
PfoI	TCCNGGA	1 cut(s)	378
PleI	GAGTC	1 cut(s)	223
PpsI	GAGTC	1 cut(s)	223
PpuMI	RGGWCCY	1 cut(s)	726
PsiI	TTATAA	1 cut(s)	605
Psp5II	RGGWCCY	1 cut(s)	726
Psp6I	CCWGG	2 cut(s)	378, 505
PspGI	CCWGG	2 cut(s)	378, 505
PspN4I	GGNNCC	5 cut(s)	181, 209, 260, 362, 728
PspPI	GGNCC	5 cut(s)	180, 237, 402, 472, 726
PspPPI	RGGWCCY	1 cut(s)	726
PstNI	CAGNNNCTG	2 cut(s)	496, 718
PsuI	RGATCY	3 cut(s)	94, 258, 332
PvuII	CAGCTG	1 cut(s)	551
RsaI	GTAC	2 cut(s)	362, 594
RsaNI	GTAC	2 cut(s)	361, 593
SapI	GCTCTTC	1 cut(s)	412
Sau3AI	GATC	5 cut(s)	40, 94, 258, 332, 487
Sau96I	GGNCC	5 cut(s)	180, 237, 402, 472, 726
SchI	GAGTC	1 cut(s)	223
ScrFI	CCNGG	4 cut(s)	302, 307, 380, 507
SduI	GDGCHC	4 cut(s)	160, 210, 424, 514
SetI	ASST	7 cut(s)	56, 111, 120, 355, 511, 553, 577
SfuI	TTCGAA	2 cut(s)	556, 766
SinI	GGWCC	2 cut(s)	237, 726
SmlI	CTYRAG	1 cut(s)	518
SmoI	CTYRAG	1 cut(s)	518
Sse9I	AATT	3 cut(s)	600, 641, 675
SsiI	CCGC	1 cut(s)	98
SspMI	CTAG	1 cut(s)	500
StyD4I	CCNGG	4 cut(s)	300, 305, 378, 505
TaaI	ACNGT	2 cut(s)	24, 685
TaqI	TCGA	4 cut(s)	134, 486, 556, 766
TasI	AATT	3 cut(s)	600, 641, 675
TatI	WGTACW	1 cut(s)	592
TscAI	CASTG	2 cut(s)	394, 457
TspRI	CASTG	2 cut(s)	394, 457
VpaK11BI	GGWCC	2 cut(s)	237, 726
XapI	RAATTY	1 cut(s)	641
XmnI	GAANNNNTTC	1 cut(s)	708
XspI	CTAG	1 cut(s)	500

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.