pycom14g05090

negative regulation of ubiquitin-protein transferase activity

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr14
Physical Location & Seq
Reverse (-)
4904504 .. 4904755
252 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom14g05090.1

Sequence Viewer

Length: 252 bp
ATGACTCCGTATTCAGCTGTTCGGACCAAGCGCTGTCTGCCCCCTTCTGTTGGTAAAGTTCAAAAAATTTTAAGGGATGTCAGTAATCAGCCATCTGAAGGAGAATTTCTTACACCACAGAAGAAACTAATGAACTCAATTGACATGGTGGAGAAAGTGGTCAGGAAAGAACTTGAGAGGCTGAAGAGAACGCCTAGCGCAAAGAAGGCTGAGAGGGAGCAAAAAGTCCGAACTCTGATGTCAATGCGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000278 GO:0000280 GO:0000902 GO:0000904 GO:0002831 GO:0002833 GO:0003006 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006725 GO:0006807 GO:0006996 GO:0007049 GO:0007088 GO:0007113 GO:0007127 GO:0007135 GO:0007275 GO:0007346 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009314 GO:0009411 GO:0009416 GO:0009553 GO:0009561 GO:0009628 GO:0009653 GO:0009791 GO:0009888 GO:0009892 GO:0009960 GO:0009987 GO:0010026 GO:0010090 GO:0010091 GO:0010154 GO:0010224 GO:0010564 GO:0010605 GO:0016043 GO:0019222 GO:0022402 GO:0022414 GO:0030154 GO:0031323 GO:0031324 GO:0031347 GO:0031349 GO:0031396 GO:0031397 GO:0031399 GO:0031400 GO:0032101 GO:0032103 GO:0032268 GO:0032269 GO:0032501 GO:0032502 GO:0032989 GO:0033043 GO:0034641 GO:0034645 GO:0040020 GO:0042023 GO:0043086 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043900 GO:0043902 GO:0044092 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044424 GO:0044464 GO:0044786 GO:0046483 GO:0048229 GO:0048285 GO:0048316 GO:0048468 GO:0048518 GO:0048519 GO:0048523 GO:0048583 GO:0048584 GO:0048608 GO:0048731 GO:0048856 GO:0048869 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051128 GO:0051171 GO:0051172 GO:0051246 GO:0051248 GO:0051321 GO:0051338 GO:0051348 GO:0051438 GO:0051444 GO:0051445 GO:0051726 GO:0051783 GO:0060255 GO:0061458 GO:0061982 GO:0061983 GO:0065007 GO:0065009 GO:0071704 GO:0071840 GO:0080090 GO:0080134 GO:0090304 GO:0090558 GO:0090626 GO:0140013 GO:1900424 GO:1900426 GO:1901360 GO:1901576 GO:1903046 GO:1903320 GO:1903321 GO:1904666 GO:1904667 GO:2000241
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

84

Amino Acids

9.61

Weight (kDa)

10.44

Isoelectric Point (pI)

39.62

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 2 cut(s) 66, 104
AcuI CTGAAG 2 cut(s) 117, 203
AfeI AGCGCT 1 cut(s) 32
AfiI CCNNNNNNNGG 2 cut(s) 50, 98
AgsI TTSAA 1 cut(s) 62
AluBI AGCT 1 cut(s) 17
AluI AGCT 1 cut(s) 17
Aor51HI AGCGCT 1 cut(s) 32
ApoI RAATTY 2 cut(s) 66, 104
AspLEI GCGC 3 cut(s) 33, 200, 249
AspS9I GGNCC 1 cut(s) 24
AvaII GGWCC 1 cut(s) 24
BccI CCATC 1 cut(s) 100
BfaI CTAG 1 cut(s) 195
BfoI RGCGCY 1 cut(s) 34
Bme18I GGWCC 1 cut(s) 24
BmgT120I GGNCC 1 cut(s) 24
BpuEI CTTGAG 1 cut(s) 194
Bsc4I CCNNNNNNNGG 2 cut(s) 50, 98
BseGI GGATG 1 cut(s) 82
BseLI CCNNNNNNNGG 2 cut(s) 50, 98
BseMII CTCAG 1 cut(s) 201
BslI CCNNNNNNNGG 2 cut(s) 50, 98
BspCNI CTCAG 1 cut(s) 202
Bst6I CTCTTC 1 cut(s) 179
BstDEI CTNAG 1 cut(s) 210
BstF5I GGATG 1 cut(s) 82
BstH2I RGCGCY 1 cut(s) 34
BstHHI GCGC 3 cut(s) 33, 200, 249
BstMWI GCNNNNNNNGC 2 cut(s) 37, 206
BtsCI GGATG 1 cut(s) 82
CfoI GCGC 3 cut(s) 33, 200, 249
Cfr13I GGNCC 1 cut(s) 24
CviAII CATG 1 cut(s) 145
CviJI RGCY 4 cut(s) 17, 91, 181, 209
CviKI_1 RGCY 4 cut(s) 17, 91, 181, 209
DdeI CTNAG 1 cut(s) 210
Eam1104I CTCTTC 1 cut(s) 179
EarI CTCTTC 1 cut(s) 179
Eco47I GGWCC 1 cut(s) 24
Eco47III AGCGCT 1 cut(s) 32
Eco57I CTGAAG 2 cut(s) 117, 203
FaeI CATG 1 cut(s) 148
FaiI YATR 1 cut(s) 146
FatI CATG 1 cut(s) 144
FokI GGATG 1 cut(s) 89
FspBI CTAG 1 cut(s) 195
GlaI GCGC 3 cut(s) 32, 199, 248
HaeII RGCGCY 1 cut(s) 34
HhaI GCGC 3 cut(s) 33, 200, 249
Hin1II CATG 1 cut(s) 148
Hin6I GCGC 3 cut(s) 31, 198, 247
HinP1I GCGC 3 cut(s) 31, 198, 247
HinfI GANTC 1 cut(s) 4
Hpy188I TCNGA 4 cut(s) 24, 97, 230, 237
Hpy188III TCNNGA 1 cut(s) 163
HpyAV CCTTC 3 cut(s) 54, 92, 199
HpyF10VI GCNNNNNNNGC 2 cut(s) 37, 206
HpyF3I CTNAG 1 cut(s) 210
Hsp92II CATG 1 cut(s) 148
HspAI GCGC 3 cut(s) 31, 198, 247
LmnI GCTCC 1 cut(s) 217
LpnPI CCDG 1 cut(s) 148
MaeI CTAG 1 cut(s) 195
MboII GAAGA 2 cut(s) 133, 196
MfeI CAATTG 1 cut(s) 138
MluCI AATT 3 cut(s) 66, 104, 138
MnlI CCTC 2 cut(s) 171, 207
MseI TTAA 1 cut(s) 71
MspA1I CMGCKG 1 cut(s) 17
MunI CAATTG 1 cut(s) 138
MwoI GCNNNNNNNGC 2 cut(s) 37, 206
NlaIII CATG 1 cut(s) 148
PspPI GGNCC 1 cut(s) 24
PvuII CAGCTG 1 cut(s) 17
SaqAI TTAA 1 cut(s) 71
Sau96I GGNCC 1 cut(s) 24
SetI ASST 1 cut(s) 19
SgeI CNNG 5 cut(s) 40, 157, 175, 185, 207
SinI GGWCC 1 cut(s) 24
SmlI CTYRAG 1 cut(s) 173
SmoI CTYRAG 1 cut(s) 173
Sse9I AATT 3 cut(s) 66, 104, 138
SspMI CTAG 1 cut(s) 195
TasI AATT 3 cut(s) 66, 104, 138
Tru1I TTAA 1 cut(s) 71
Tru9I TTAA 1 cut(s) 71
TspDTI ATGAA 1 cut(s) 146
VpaK11BI GGWCC 1 cut(s) 24
XapI RAATTY 2 cut(s) 66, 104
XspI CTAG 1 cut(s) 195
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.