Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000003

Orthogroup ID

OG0001662

Physical Location & Seq

Genomic Coordinates Reverse (-)

10695438 .. 10698481

Gene Structure 3044 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug03G0131900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 849 bp

ATGGCGTCGTGTCGTTTACATTTCTCTCTACGATGTCCCTCCCAAACGCCACGTCTCTCTTCCCGAAACCCTACCTCCCCTCCCCTACTTAATCTCATTCCCTCCTCCTCTAATCCCCAAAAGGTCTCTTATTCCGGTACGCGGCGCCGGAGATTACTTACCGTGAAGGCGCACATGACCACCCAGGAGAAGGCGGTCTCCGGCGACCGAATGCTGGTATTTGTGCCGCCGCACCCGTTGATTAAGCATTGGGTTTCAGTCCTGAGAAATGAGCAAACCCCTTGCCCCATTTTCAAAAATGCCATGGCTGAGTTGGGGAGACTTCTTATTTATGAAGCTTCAAGAGATTGGTTGCCTACGGTCACCGGAGAAATTCAATCACCAATGGGTGTTGCATCAGTTGAATTCATAGATCCAAGGGAGCCTGTGGCGGTCGTTCCAATACTGAGAGCTGGTTTAGCTCTTATGGAACATGCATCATCCGTCTTGCCAGCAACAAAAACATACCATCTTGGAATGGCCCGAGACGAGGAAACACTTCTACCAACTATATATCTTAACAAGCTACCTGCAAAATTTCCTGAAGGATCTCGAGTATTTCTGTTTGATCCGATGCTAGCAACAGGTGGCACAATAGTGGCCGCTGTGGACCTATTAAAGGAGCATGGGCTTGCTAACAAGCAAATCAAAGTGATATCTGCTGTAGCTGCTCCTCCGGCCCTTCAAAAGCTGAGCGAGAAATTTCCAGGGCTTCATGTGTACACTGGCATCATTGATCCTACTGTAAATGACAGAGGGTTTATAATCCCTGGTCTGGGTGATGCTGGAGACCGTAGCTTTGGTACCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000278 GO:0000280 GO:0000902 GO:0000904 GO:0002831 GO:0002833 GO:0003006 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006725 GO:0006807 GO:0006996 GO:0007049 GO:0007088 GO:0007113 GO:0007127 GO:0007135 GO:0007275 GO:0007346 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009314 GO:0009411 GO:0009416 GO:0009553 GO:0009561 GO:0009628 GO:0009653 GO:0009791 GO:0009888 GO:0009892 GO:0009960 GO:0009987 GO:0010026 GO:0010090 GO:0010091 GO:0010154 GO:0010224 GO:0010564 GO:0010605 GO:0016043 GO:0019222 GO:0022402 GO:0022414 GO:0030154 GO:0031323 GO:0031324 GO:0031347 GO:0031349 GO:0031396 GO:0031397 GO:0031399 GO:0031400 GO:0032101 GO:0032103 GO:0032268 GO:0032269 GO:0032501 GO:0032502 GO:0032989 GO:0033043 GO:0034641 GO:0034645 GO:0040020 GO:0042023 GO:0043086 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043900 GO:0043902 GO:0044092 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044424 GO:0044464 GO:0044786 GO:0046483 GO:0048229 GO:0048285 GO:0048316 GO:0048468 GO:0048518 GO:0048519 GO:0048523 GO:0048583 GO:0048584 GO:0048608 GO:0048731 GO:0048856 GO:0048869 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051128 GO:0051171 GO:0051172 GO:0051246 GO:0051248 GO:0051321 GO:0051338 GO:0051348 GO:0051438 GO:0051444 GO:0051445 GO:0051726 GO:0051783 GO:0060255 GO:0061458 GO:0061982 GO:0061983 GO:0065007 GO:0065009 GO:0071704 GO:0071840 GO:0080090 GO:0080134 GO:0090304 GO:0090558 GO:0090626 GO:0140013 GO:1900424 GO:1900426 GO:1901360 GO:1901576 GO:1903046 GO:1903320 GO:1903321 GO:1904666 GO:1904667 GO:2000241

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

282

Amino Acids

30.78

Weight (kDa)

9.54

Isoelectric Point (pI)

46.4

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
UPRTase	PF14681	75 - 282	2.7e-68	Uracil phosphoribosyltransferase
Pribosyltran	PF00156	139 - 237	2.1e-11	Phosphoribosyl transferase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001662)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G42260 AT2G42260 AT3G57860
fragaria_vesca	FvH4_1g24920 FvH4_6g18600
malus_domestica	MD12G1062400.v1.1 MD14G1063100.v1.1
prunus_persica	Prupe.7G071700_v2.0.a1
pyrus_communis	pycom14g05090
rosa_chinensis	RchiOBHm_Chr3g0473161 RchiOBHm_Chr3g0473181 RchiOBHm_Chr7g0219161
rosa_laevigata	RLG00000002322 RLG00000002349 RLG00000002350 RLG00000015134 RLG00000024022 RLG00000024024
rosa_multiflora	Rmu_sc0001539.1_g000007 Rmu_sc0003069.1_g000059 Rmu_sc0003069.1_g000060 Rmu_sc0039741.1_g000001 Rmu_sc0040292.1_g000002
rosa_roxburghii	Rroxscaffold_3G00240460 Rroxscaffold_6G00408240 Rroxscaffold_6G00408260
rosa_rugosa	Rorug03G0131900 Rorug03G0132000 Rorug03G0132100 Rorug07G0183500
rosa_samantha	Rh3AG183500 Rh3AG183700 Rh3BG209900 Rh3BG210200 Rh3CG207000 Rh3CG207300 Rh3DG207100 Rh3DG207300 Rh7AG325800 Rh7AG326200 Rh7CG342900 Rh7CG343200 Rh7DG321500
rosa_wichuraiana	Rw0G008100 Rw0G008120 Rw0G014730 Rw0G014750 Rw0G019040 Rw7G028360

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	803
Acc36I	ACCTGC	1 cut(s)	577
Acc65I	GGTACC	1 cut(s)	842
AccB1I	GGYRCC	2 cut(s)	144, 842
AccII	CGCG	1 cut(s)	142
AciI	CCGC	6 cut(s)	142, 194, 227, 230, 431, 642
AclWI	GGATC	4 cut(s)	407, 595, 602, 770
AcoI	YGGCCR	1 cut(s)	639
AcsI	RAATTY	4 cut(s)	372, 404, 575, 740
AcuI	CTGAAG	1 cut(s)	603
AcyI	GRCGYC	2 cut(s)	5, 145
AfaI	GTAC	3 cut(s)	139, 761, 844
AfiI	CCNNNNNNNGG	7 cut(s)	141, 190, 214, 529, 658, 814, 815
AgsI	TTSAA	5 cut(s)	295, 342, 377, 404, 725
AjiI	CACGTC	1 cut(s)	53
AjnI	CCWGG	3 cut(s)	183, 745, 808
AleI	CACNNNNGTG	1 cut(s)	635
AluBI	AGCT	7 cut(s)	338, 452, 461, 565, 707, 730, 837
AluI	AGCT	7 cut(s)	338, 452, 461, 565, 707, 730, 837
Alw26I	GTCTC	6 cut(s)	59, 130, 202, 313, 519, 822
AlwI	GGATC	4 cut(s)	407, 595, 602, 770
Ama87I	CYCGRG	2 cut(s)	522, 591
AoxI	GGCC	3 cut(s)	519, 639, 717
ApeKI	GCWGC	1 cut(s)	707
ApoI	RAATTY	4 cut(s)	372, 404, 575, 740
ArsI	GACNNNNNNTTYG	3 cut(s)	37, 69, 821
Asp700I	GAANNNNTTC	1 cut(s)	537
Asp718I	GGTACC	1 cut(s)	842
AspLEI	GCGC	2 cut(s)	147, 172
AspS9I	GGNCC	3 cut(s)	520, 649, 718
AsuHPI	GGTGA	3 cut(s)	355, 372, 830
AsuNHI	GCTAGC	1 cut(s)	616
AvaI	CYCGRG	2 cut(s)	522, 591
AvaII	GGWCC	1 cut(s)	649
BanI	GGYRCC	2 cut(s)	144, 842
BbvI	GCAGC	1 cut(s)	694
BccI	CCATC	1 cut(s)	516
BciT130I	CCWGG	3 cut(s)	185, 747, 810
BcoDI	GTCTC	6 cut(s)	59, 130, 202, 313, 519, 822
BfaI	CTAG	2 cut(s)	617, 847
BfmI	CTRYAG	1 cut(s)	702
BfoI	RGCGCY	1 cut(s)	148
BfuAI	ACCTGC	1 cut(s)	577
BisI	GCNGC	5 cut(s)	143, 227, 230, 642, 708
BlpI	GCTNAGC	1 cut(s)	731
BlsI	GCNGC	5 cut(s)	144, 228, 231, 643, 709
Bme1390I	CCNGG	3 cut(s)	185, 747, 810
Bme18I	GGWCC	1 cut(s)	649
BmeT110I	CYCGRG	2 cut(s)	522, 591
BmgBI	CACGTC	1 cut(s)	53
BmgT120I	GGNCC	3 cut(s)	520, 649, 718
BmiI	GGNNCC	3 cut(s)	146, 423, 844
BmrFI	CCNGG	3 cut(s)	185, 747, 810
BmsI	GCATC	5 cut(s)	404, 485, 603, 777, 811
BmtI	GCTAGC	1 cut(s)	620
BpmI	CTGGAG	1 cut(s)	846
Bpu1102I	GCTNAGC	1 cut(s)	731
BsaHI	GRCGYC	2 cut(s)	5, 145
BsaI	GGTCTC	3 cut(s)	130, 202, 822
BsaJI	CCNNGG	5 cut(s)	183, 303, 416, 746, 808
BsaWI	WCCGGW	2 cut(s)	134, 365
BsaXI	ACNNNNNCTCC	4 cut(s)	59, 64, 89, 94
Bsc4I	CCNNNNNNNGG	7 cut(s)	141, 190, 214, 529, 658, 814, 815
Bse1I	ACTGG	1 cut(s)	769
BseBI	CCWGG	3 cut(s)	185, 747, 810
BseDI	CCNNGG	5 cut(s)	183, 303, 416, 746, 808
BseGI	GGATG	1 cut(s)	479
BseLI	CCNNNNNNNGG	7 cut(s)	141, 190, 214, 529, 658, 814, 815
BseMII	CTCAG	4 cut(s)	254, 300, 437, 722
BseNI	ACTGG	1 cut(s)	769
BseRI	GAGGAG	3 cut(s)	94, 97, 702
BseXI	GCAGC	1 cut(s)	694
Bsh1236I	CGCG	1 cut(s)	142
Bsh1285I	CGRYCG	2 cut(s)	208, 435
BshFI	GGCC	3 cut(s)	521, 641, 719
BshNI	GGYRCC	2 cut(s)	144, 842
BsiEI	CGRYCG	2 cut(s)	208, 435
BsiHKCI	CYCGRG	2 cut(s)	522, 591
BsiSI	CCGG	5 cut(s)	135, 148, 201, 366, 716
BslFI	GGGAC	1 cut(s)	21
BslI	CCNNNNNNNGG	7 cut(s)	141, 190, 214, 529, 658, 814, 815
BsmAI	GTCTC	6 cut(s)	59, 130, 202, 313, 519, 822
BsmBI	CGTCTC	2 cut(s)	59, 519
BsmFI	GGGAC	1 cut(s)	21
BsmI	GAATGC	1 cut(s)	216
BsnI	GGCC	3 cut(s)	521, 641, 719
Bso31I	GGTCTC	3 cut(s)	130, 202, 822
BsoBI	CYCGRG	2 cut(s)	522, 591
Bsp1407I	TGTACA	1 cut(s)	759
Bsp143I	GATC	4 cut(s)	412, 587, 607, 775
Bsp1720I	GCTNAGC	1 cut(s)	731
Bsp19I	CCATGG	1 cut(s)	303
BspACI	CCGC	6 cut(s)	142, 194, 227, 230, 431, 642
BspANI	GGCC	3 cut(s)	521, 641, 719
BspCNI	CTCAG	4 cut(s)	255, 301, 438, 723
BspFNI	CGCG	1 cut(s)	142
BspLI	GGNNCC	3 cut(s)	146, 423, 844
BspMI	ACCTGC	1 cut(s)	577
BspOI	GCTAGC	1 cut(s)	620
BspPI	GGATC	4 cut(s)	407, 595, 602, 770
BspT107I	GGYRCC	2 cut(s)	144, 842
BspTNI	GGTCTC	3 cut(s)	130, 202, 822
BsrGI	TGTACA	1 cut(s)	759
BsrI	ACTGG	1 cut(s)	769
BssECI	CCNNGG	5 cut(s)	183, 303, 416, 746, 808
BssMI	GATC	4 cut(s)	412, 587, 607, 775
BssNI	GRCGYC	2 cut(s)	5, 145
BssT1I	CCWWGG	2 cut(s)	303, 416
Bst2UI	CCWGG	3 cut(s)	185, 747, 810
Bst4CI	ACNGT	4 cut(s)	163, 361, 784, 833
Bst6I	CTCTTC	1 cut(s)	64
BstACI	GRCGYC	2 cut(s)	5, 145
BstAUI	TGTACA	1 cut(s)	759
BstC8I	GCNNGC	3 cut(s)	492, 618, 672
BstDEI	CTNAG	4 cut(s)	263, 309, 446, 731
BstDSI	CCRYGG	1 cut(s)	303
BstEII	GGTNACC	1 cut(s)	361
BstENI	CCTNNNNNAGG	1 cut(s)	656
BstF5I	GGATG	1 cut(s)	479
BstFNI	CGCG	1 cut(s)	142
BstH2I	RGCGCY	1 cut(s)	148
BstHHI	GCGC	2 cut(s)	147, 172
BstKTI	GATC	4 cut(s)	415, 590, 610, 778
BstMAI	GTCTC	6 cut(s)	59, 130, 202, 313, 519, 822
BstMBI	GATC	4 cut(s)	412, 587, 607, 775
BstMCI	CGRYCG	2 cut(s)	208, 435
BstMWI	GCNNNNNNNGC	3 cut(s)	458, 707, 716
BstNI	CCWGG	3 cut(s)	185, 747, 810
BstNSI	RCATGY	1 cut(s)	476
BstPI	GGTNACC	1 cut(s)	361
BstSCI	CCNGG	3 cut(s)	183, 745, 808
BstSFI	CTRYAG	1 cut(s)	702
BstUI	CGCG	1 cut(s)	142
BstV1I	GCAGC	1 cut(s)	694
BstX2I	RGATCY	2 cut(s)	412, 587
BstYI	RGATCY	2 cut(s)	412, 587
BsuRI	GGCC	3 cut(s)	521, 641, 719
BtgI	CCRYGG	1 cut(s)	303
BtrI	CACGTC	1 cut(s)	53
BtsCI	GGATG	1 cut(s)	479
BtsIMutI	CAGTG	1 cut(s)	762
BveI	ACCTGC	1 cut(s)	577
Cac8I	GCNNGC	3 cut(s)	492, 618, 672
CfoI	GCGC	2 cut(s)	147, 172
Cfr13I	GGNCC	3 cut(s)	520, 649, 718
Csp6I	GTAC	3 cut(s)	138, 760, 843
CviAII	CATG	5 cut(s)	175, 304, 473, 665, 755
CviQI	GTAC	3 cut(s)	138, 760, 843
DdeI	CTNAG	4 cut(s)	263, 309, 446, 731
DinI	GGCGCC	1 cut(s)	146
DpnI	GATC	4 cut(s)	414, 589, 609, 777
DpnII	GATC	4 cut(s)	412, 587, 607, 775
EaeI	YGGCCR	1 cut(s)	639
Eam1104I	CTCTTC	1 cut(s)	64
EarI	CTCTTC	1 cut(s)	64
Eco130I	CCWWGG	2 cut(s)	303, 416
Eco31I	GGTCTC	3 cut(s)	130, 202, 822
Eco32I	GATATC	1 cut(s)	696
Eco47I	GGWCC	1 cut(s)	649
Eco57I	CTGAAG	1 cut(s)	603
Eco88I	CYCGRG	2 cut(s)	522, 591
Eco91I	GGTNACC	1 cut(s)	361
EcoNI	CCTNNNNNAGG	1 cut(s)	656
EcoO65I	GGTNACC	1 cut(s)	361
EcoRI	GAATTC	1 cut(s)	404
EcoRII	CCWGG	3 cut(s)	183, 745, 808
EcoRV	GATATC	1 cut(s)	696
EcoT14I	CCWWGG	2 cut(s)	303, 416
EcoT22I	ATGCAT	1 cut(s)	478
EgeI	GGCGCC	1 cut(s)	146
EheI	GGCGCC	1 cut(s)	146
ErhI	CCWWGG	2 cut(s)	303, 416
Esp3I	CGTCTC	2 cut(s)	59, 519
FaeI	CATG	5 cut(s)	178, 307, 476, 668, 758
FaqI	GGGAC	1 cut(s)	21
FatI	CATG	5 cut(s)	174, 303, 472, 664, 754
Fnu4HI	GCNGC	5 cut(s)	143, 227, 230, 642, 708
FokI	GGATG	1 cut(s)	466
Fsp4HI	GCNGC	5 cut(s)	143, 227, 230, 642, 708
FspBI	CTAG	2 cut(s)	617, 847
GlaI	GCGC	2 cut(s)	146, 171
GluI	GCNGC	5 cut(s)	143, 227, 230, 642, 708
GsuI	CTGGAG	1 cut(s)	846
HaeII	RGCGCY	1 cut(s)	148
HaeIII	GGCC	3 cut(s)	521, 641, 719
HapII	CCGG	5 cut(s)	135, 148, 201, 366, 716
HhaI	GCGC	2 cut(s)	147, 172
Hin1I	GRCGYC	2 cut(s)	5, 145
Hin1II	CATG	5 cut(s)	178, 307, 476, 668, 758
Hin6I	GCGC	2 cut(s)	145, 170
HinP1I	GCGC	2 cut(s)	145, 170
HindIII	AAGCTT	1 cut(s)	336
HpaII	CCGG	5 cut(s)	135, 148, 201, 366, 716
HphI	GGTGA	3 cut(s)	355, 372, 830
Hpy166II	GTNNAC	4 cut(s)	17, 649, 760, 762
Hpy188I	TCNGA	1 cut(s)	612
Hpy188III	TCNNGA	5 cut(s)	63, 262, 342, 581, 591
Hpy8I	GTNNAC	4 cut(s)	17, 649, 760, 762
Hpy99I	CGWCG	1 cut(s)	10
HpyAV	CCTTC	4 cut(s)	160, 184, 578, 731
HpyCH4III	ACNGT	4 cut(s)	163, 361, 784, 833
HpyCH4IV	ACGT	1 cut(s)	52
HpyCH4V	TGCA	3 cut(s)	395, 476, 572
HpyF10VI	GCNNNNNNNGC	3 cut(s)	458, 707, 716
HpyF3I	CTNAG	4 cut(s)	263, 309, 446, 731
HpySE526I	ACGT	1 cut(s)	52
Hsp92I	GRCGYC	2 cut(s)	5, 145
Hsp92II	CATG	5 cut(s)	178, 307, 476, 668, 758
HspAI	GCGC	2 cut(s)	145, 170
KasI	GGCGCC	1 cut(s)	144
KpnI	GGTACC	1 cut(s)	846
Kzo9I	GATC	4 cut(s)	412, 587, 607, 775
LmnI	GCTCC	3 cut(s)	421, 661, 715
Lsp1109I	GCAGC	1 cut(s)	694
LweI	GCATC	5 cut(s)	404, 485, 603, 777, 811
MaeI	CTAG	2 cut(s)	617, 847
MaeII	ACGT	1 cut(s)	52
MaeIII	GTNAC	1 cut(s)	361
MalI	GATC	4 cut(s)	414, 589, 609, 777
MboI	GATC	4 cut(s)	412, 587, 607, 775
MboII	GAAGA	1 cut(s)	51
MflI	RGATCY	2 cut(s)	412, 587
MluCI	AATT	4 cut(s)	372, 404, 575, 740
Mly113I	GGCGCC	1 cut(s)	145
MnlI	CCTC	9 cut(s)	49, 85, 90, 112, 115, 118, 523, 723, 788
Mph1103I	ATGCAT	1 cut(s)	478
MroXI	GAANNNNTTC	1 cut(s)	537
MseI	TTAA	4 cut(s)	90, 243, 558, 656
MslI	CAYNNNNRTG	1 cut(s)	635
MspA1I	CMGCKG	1 cut(s)	644
MspI	CCGG	5 cut(s)	135, 148, 201, 366, 716
MspR9I	CCNGG	3 cut(s)	185, 747, 810
Mva1269I	GAATGC	1 cut(s)	216
MvaI	CCWGG	3 cut(s)	185, 747, 810
MvnI	CGCG	1 cut(s)	142
MwoI	GCNNNNNNNGC	3 cut(s)	458, 707, 716
NarI	GGCGCC	1 cut(s)	145
NcoI	CCATGG	1 cut(s)	303
NdeII	GATC	4 cut(s)	412, 587, 607, 775
NheI	GCTAGC	1 cut(s)	616
NlaIII	CATG	5 cut(s)	178, 307, 476, 668, 758
NlaIV	GGNNCC	3 cut(s)	146, 423, 844
NmuCI	GTSAC	1 cut(s)	361
NsiI	ATGCAT	1 cut(s)	478
NspI	RCATGY	1 cut(s)	476
OliI	CACNNNNGTG	1 cut(s)	635
PaeR7I	CTCGAG	1 cut(s)	591
PctI	GAATGC	1 cut(s)	216
PdmI	GAANNNNTTC	1 cut(s)	537
PkrI	GCNGC	5 cut(s)	144, 228, 231, 643, 709
PluTI	GGCGCC	1 cut(s)	148
PsiI	TTATAA	1 cut(s)	803
Psp6I	CCWGG	3 cut(s)	183, 745, 808
PspEI	GGTNACC	1 cut(s)	361
PspGI	CCWGG	3 cut(s)	183, 745, 808
PspN4I	GGNNCC	3 cut(s)	146, 423, 844
PspPI	GGNCC	3 cut(s)	520, 649, 718
PsuI	RGATCY	2 cut(s)	412, 587
RsaI	GTAC	3 cut(s)	139, 761, 844
RsaNI	GTAC	3 cut(s)	138, 760, 843
RseI	CAYNNNNRTG	1 cut(s)	635
SaqAI	TTAA	4 cut(s)	90, 243, 558, 656
SatI	GCNGC	5 cut(s)	143, 227, 230, 642, 708
Sau3AI	GATC	4 cut(s)	412, 587, 607, 775
Sau96I	GGNCC	3 cut(s)	520, 649, 718
ScrFI	CCNGG	3 cut(s)	185, 747, 810
SfaNI	GCATC	5 cut(s)	404, 485, 603, 777, 811
SfcI	CTRYAG	1 cut(s)	702
SfoI	GGCGCC	1 cut(s)	146
Sfr274I	CTCGAG	1 cut(s)	591
SinI	GGWCC	1 cut(s)	649
SlaI	CTCGAG	1 cut(s)	591
SmiMI	CAYNNNNRTG	1 cut(s)	635
SmlI	CTYRAG	1 cut(s)	591
SmoI	CTYRAG	1 cut(s)	591
Sse9I	AATT	4 cut(s)	372, 404, 575, 740
SsiI	CCGC	6 cut(s)	142, 194, 227, 230, 431, 642
SspDI	GGCGCC	1 cut(s)	144
SspMI	CTAG	2 cut(s)	617, 847
StyD4I	CCNGG	3 cut(s)	183, 745, 808
StyI	CCWWGG	2 cut(s)	303, 416
TaaI	ACNGT	4 cut(s)	163, 361, 784, 833
TaiI	ACGT	1 cut(s)	55
TaqI	TCGA	1 cut(s)	592
TaqII	GACCGA	1 cut(s)	222
TasI	AATT	4 cut(s)	372, 404, 575, 740
TatI	WGTACW	1 cut(s)	759
TauI	GCSGC	4 cut(s)	145, 229, 232, 644
Tru1I	TTAA	4 cut(s)	90, 243, 558, 656
Tru9I	TTAA	4 cut(s)	90, 243, 558, 656
TscAI	CASTG	1 cut(s)	769
TseFI	GTSAC	1 cut(s)	361
TseI	GCWGC	1 cut(s)	707
Tsp45I	GTSAC	1 cut(s)	361
TspDTI	ATGAA	3 cut(s)	348, 397, 743
TspGWI	ACGGA	1 cut(s)	472
TspRI	CASTG	1 cut(s)	769
VpaK11BI	GGWCC	1 cut(s)	649
XagI	CCTNNNNNAGG	1 cut(s)	656
XapI	RAATTY	4 cut(s)	372, 404, 575, 740
XceI	RCATGY	1 cut(s)	476
XcmI	CCANNNNNNNNNTGG	1 cut(s)	310
XhoI	CTCGAG	1 cut(s)	591
XmnI	GAANNNNTTC	1 cut(s)	537
XspI	CTAG	2 cut(s)	617, 847
Zsp2I	ATGCAT	1 cut(s)	478

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.