Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr17

Orthogroup ID

OG0002386

Physical Location & Seq

Genomic Coordinates Forward (+)

34087607 .. 34089657

Gene Structure 2051 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD17G1281200.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1986 bp

ATGAACACCCCCAAAGGCACTGTCGTCTTCTCCACCGTTGGCAGACCCCACTATGGCTTCGACATTTTCGCCCTCCCCACCCTCCTCCACCCCTCCTCTACCAATATCGGCCCTGAGCGCCGCCTCTCCGACGGCCGTTCCATCAACTTCAACGCCCAATTCGCCGACAACAGCCACGAACCCCACTCCCTCGTCTTCATCTCCGAGCGAACCGGTTTTCCCGCCATTTACTTAACCCGACCTGGACTCCCCCATCCCCAGCTCGTGCACTCCGAACCCGGATCCCTCTTCCACGACCGACCCATCATAAAAAATCACACCCTCTACTTCGTTTCAGCTCACCAGGATCCCAGCCGATACTTCAAATCCTGGTCTGCTCTCTACTCCTCCACACTCCTCCATGACAAAATCACAACCCGATTGACTCCCTCTGACTCCGTCGATTACAGTCCCGCCCTCTCTCTCTCCGGAAAATTCGTCGCCGTCGCCTCGTACGGATCCCGTCCATGGGACGGTGAGTTTCACGAGCTCAACACCGATATCGTCGTATTCGAAGCATCGCGACCCAGTAAGCGCGTACTCGTCTGCGAGCGCGGTGGCTGGCCCACCTGGTCCGGCGACTCCGTCATATATTTTCACCGCCAACATGACGACGGCTGGTGGAGCATTTTCCGGGTCGATTTCCATTTTCCCAAAGATCTGGAGTCCTCTTCTGGGTTCCCGATCACTCCCACTCGAGTCACTCCATCGGGGCTCCACTGCTTCACTCCGGCAGCTTTCCACGACGGAAAACTAATCGCCGTCGCGACTCGCCGGCCCGGTAAGAATTTCCGACACATTGAGCTCTTTGATGTCGAATCCAAGACGTTTCAGCCGATGACAGAGATCCTGAACCCGAATTTCCACCATTACAACCCGTTTGTTTCGCCCGATTCAGAGCTCCTCGGGTATCACCGATTCCGTGGTGATTCGACTCAGTGGGGCGAGTCCGATTCCACAATTCCTTATATCGAGCGAGTGTCTTCGCCTACTGAACAACTCCAGATGTTGAGGATTCAGGGTTCGTTCCCAACCTTCTCTCCGAGCGGCGATCTGATGGCGTATAATCAGGATTTGGATGGGGACAGCGGAATCAAGGTCATCAAATCGGACGGCTCAAAGCGCTGGAATTTGATCAAGGGCCGCGCAGCCTTCTACAACGCCTGGAGTCCAACCGAGAAACACGTCATCTACACCTCGGTGGGCCCAATATTCCAGTCGGCCAAAACAACTGTCCAGATTGCACGAGTCGAATTTCACCCGTCAGATCTCGACGGCGATAAAGAGGACGTCCCGTGCAATGTAAAGATATTGACTGAGGAAGAAACAGGGAATAACGCTTTCCCTTCGTGCTCTCCAGACGGCATGTCGTTGGTATTCCGCTCCGGTCGGACAGGGCACAAGAACCTCTACATTATTGACGCCGTTGACGGCGAGTTTAACGGCAGTGTGCGTCAATTAACTGAGGGCCCCTGTATCGATACCATGCCAAGTTGGTCACCAAAAGGTGACCTCATTGCTTTCTCTTCGAACAGACACAATCCGGATGACGCAGCGGTGTTCGGCATTTACGTCGTCAAACCGGACGGTACCGGTTTGAGGAGGATCCCGGTGGCGGGAAATGAGTCGCACAGGGAGAGGATCAACCACGTGTGCTTCAGCAAGGACGGGGAGTGGCTGCTGTTCACGGCGAACTTGAGCGGCGTGATAGCTGAGCCGGTGTCGTTGCCGAATCAGTTTCAGCCGTACGGGGATTTGTACGTGGTGAGAATGGATGGGAGTGGGTTGAGGAGGCTGACGTGGAATGGGTACGAAAATGGGACGCCAGCGTGGCACGAGGGTGGTGATGAGCTGGACATGGGGGGCTTGCGGTTGGGAAATGAAGTTGGAGGAGACGAGCTCAAGGGTCAGTTTGAGGATCCTCATTGGATTTCTTGCGATTTCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DPPIV_N PD40

Protein Analysis

662

Amino Acids

73.89

Weight (kDa)

5.85

Isoelectric Point (pI)

44.9

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Tricorn_N	PF26549	455 - 552	1e-09	Tricorn protease N-terminal beta propeller domain
PD40	PF07676	498 - 538	3.8e-07	WD40-like Beta Propeller Repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002386)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G01870 AT4G01870
fragaria_vesca	FvH4_1g26490
malus_domestica	MD17G1281200.v1.1
prunus_persica	Prupe.3G004400_v2.0.a1
pyrus_communis	pycom09g02860 pycom10g10260 pycom17g27890
rosa_chinensis	RchiOBHm_Chr2g0147951 RchiOBHm_Chr3g0485261 RchiOBHm_Chr3g0486551 RchiOBHm_Chr6g0276991 RchiOBHm_Chr6g0277001
rosa_laevigata	RLG00000023077 RLG00000024900 RLG00000033827
rosa_multiflora	Rmu_sc0000308.1_g000067 Rmu_sc0001260.1_g000030 Rmu_sc0003040.1_g000011 Rmu_sc0003801.1_g000028 Rmu_sc0003801.1_g000029 Rmu_sc0008973.1_g000015 Rmu_sc0011408.1_g000002 Rmu_sc0011408.1_g000004 Rmu_sc0011943.1_g000001 Rmu_sc0032328.1_g000001 Rmu_sc0040736.1_g000001
rosa_roxburghii	Rroxscaffold_2G00138000 Rroxscaffold_4G00302670 Rroxscaffold_5G00344080 Rroxscaffold_5G00373530 Rroxscaffold_6G00395800
rosa_rugosa	Rorug03G0225100
rosa_samantha	Rh3AG275100 Rh3BG310200 Rh3CG309400 Rh3DG306200 Rh4BG238600 Rh6BG152100 Rh6CG318000 Rh6DG302900
rosa_wichuraiana	Rw3G024520

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	1332
Acc65I	GGTACC	1 cut(s)	1628
AccB1I	GGYRCC	1 cut(s)	1628
AccBSI	CCGCTC	3 cut(s)	1086, 1422, 1740
AccII	CGCG	5 cut(s)	562, 576, 594, 806, 1185
AccIII	TCCGGA	2 cut(s)	467, 1582
AcoI	YGGCCR	2 cut(s)	133, 1260
AcsI	RAATTY	5 cut(s)	473, 826, 898, 1168, 1292
AcuI	CTGAAG	1 cut(s)	1681
AcvI	CACGTG	1 cut(s)	1690
AcyI	GRCGYC	3 cut(s)	1329, 1461, 1862
AfaI	GTAC	6 cut(s)	494, 579, 1630, 1787, 1799, 1850
AfeI	AGCGCT	1 cut(s)	1163
AfiI	CCNNNNNNNGG	8 cut(s)	53, 507, 508, 512, 714, 1638, 1654, 1655
AflIII	ACRYGT	2 cut(s)	1222, 1689
AgeI	ACCGGT	2 cut(s)	212, 1631
AgsI	TTSAA	2 cut(s)	151, 364
AhdI	GACNNNNNGTC	1 cut(s)	1405
AjiI	CACGTC	2 cut(s)	1225, 1839
AjnI	CCWGG	5 cut(s)	241, 342, 368, 608, 1202
AleI	CACNNNNGTG	2 cut(s)	1238, 1878
AloI	GAACNNNNNNTCC	4 cut(s)	202, 234, 1045, 1077
AluBI	AGCT	9 cut(s)	262, 338, 529, 776, 844, 940, 1751, 1891, 1939
AluI	AGCT	9 cut(s)	262, 338, 529, 776, 844, 940, 1751, 1891, 1939
Alw21I	GWGCWC	6 cut(s)	270, 531, 846, 942, 1394, 1941
Alw26I	GTCTC	1 cut(s)	1926
Alw44I	GTGCAC	1 cut(s)	266
Ama87I	CYCGRG	2 cut(s)	735, 944
Aor13HI	TCCGGA	2 cut(s)	467, 1582
Aor51HI	AGCGCT	1 cut(s)	1163
AoxI	GGCC	8 cut(s)	109, 133, 602, 815, 1180, 1243, 1260, 1507
ApaI	GGGCCC	2 cut(s)	1247, 1511
ApaLI	GTGCAC	1 cut(s)	266
ApeKI	GCWGC	4 cut(s)	773, 1187, 1592, 1717
ApoI	RAATTY	5 cut(s)	473, 826, 898, 1168, 1292
ArsI	GACNNNNNNTTYG	3 cut(s)	38, 1257, 1289
AsiGI	ACCGGT	2 cut(s)	212, 1631
Asp718I	GGTACC	1 cut(s)	1628
AspLEI	GCGC	5 cut(s)	120, 576, 594, 1164, 1187
AspS9I	GGNCC	9 cut(s)	110, 603, 612, 816, 1180, 1243, 1244, 1507, 1508
AsuC2I	CCSGG	4 cut(s)	279, 674, 819, 1649
AsuII	TTCGAA	2 cut(s)	552, 1568
AvaI	CYCGRG	2 cut(s)	735, 944
AvaII	GGWCC	1 cut(s)	612
BaeGI	GKGCMC	4 cut(s)	270, 1247, 1440, 1511
BamHI	GGATCC	5 cut(s)	281, 346, 497, 1644, 1957
BanI	GGYRCC	1 cut(s)	1628
BanII	GRGCYC	7 cut(s)	531, 756, 846, 942, 1247, 1511, 1941
BauI	CACGAG	4 cut(s)	263, 524, 1284, 1874
BbrPI	CACGTG	1 cut(s)	1690
BbsI	GAAGAC	3 cut(s)	19, 187, 1014
Bbv12I	GWGCWC	6 cut(s)	270, 531, 846, 942, 1394, 1941
BbvI	GCAGC	4 cut(s)	785, 1199, 1604, 1704
BccI	CCATC	7 cut(s)	149, 261, 311, 754, 1090, 1112, 1808
BcgI	CGANNNNNNTGC	2 cut(s)	1594, 1628
BciT130I	CCWGG	5 cut(s)	243, 344, 370, 610, 1204
BclI	TGATCA	1 cut(s)	1173
BcnI	CCSGG	4 cut(s)	279, 674, 819, 1649
BcoDI	GTCTC	1 cut(s)	1926
BfaI	CTAG	1 cut(s)	1984
BfoI	RGCGCY	2 cut(s)	121, 1165
BglI	GCCNNNNNGGC	1 cut(s)	1870
BglII	AGATCT	2 cut(s)	697, 1306
BisI	GCNGC	8 cut(s)	121, 774, 1087, 1183, 1188, 1593, 1718, 1741
BlpI	GCTNAGC	1 cut(s)	1752
BlsI	GCNGC	8 cut(s)	122, 775, 1088, 1184, 1189, 1594, 1719, 1742
Bme1390I	CCNGG	9 cut(s)	243, 279, 344, 370, 610, 674, 819, 1204, 1649
Bme18I	GGWCC	1 cut(s)	612
BmeRI	GACNNNNNGTC	1 cut(s)	1405
BmeT110I	CYCGRG	2 cut(s)	735, 944
BmgBI	CACGTC	2 cut(s)	1225, 1839
BmgT120I	GGNCC	9 cut(s)	110, 603, 612, 816, 1180, 1243, 1244, 1507, 1508
BmrFI	CCNGG	9 cut(s)	243, 279, 344, 370, 610, 674, 819, 1204, 1649
BmrI	ACTGGG	1 cut(s)	561
BmsI	GCATC	1 cut(s)	566
BmuI	ACTGGG	1 cut(s)	561
BpiI	GAAGAC	3 cut(s)	19, 187, 1014
BplI	GAGNNNNNCTC	2 cut(s)	1923, 1955
BpmI	CTGGAG	4 cut(s)	722, 1025, 1225, 1380
Bpu10I	CCTNAGC	1 cut(s)	114
Bpu1102I	GCTNAGC	1 cut(s)	1752
Bpu14I	TTCGAA	2 cut(s)	552, 1568
BpuEI	CTTGAG	2 cut(s)	1756, 1925
BpuMI	CCSGG	4 cut(s)	279, 674, 819, 1649
Bsa29I	ATCGAT	1 cut(s)	1518
BsaAI	YACGTR	2 cut(s)	1690, 1801
BsaHI	GRCGYC	3 cut(s)	1329, 1461, 1862
BsaJI	CCNNGG	4 cut(s)	506, 943, 961, 1236
BsaWI	WCCGGW	6 cut(s)	212, 467, 1424, 1582, 1621, 1631
BsaXI	ACNNNNNCTCC	4 cut(s)	231, 261, 1063, 1093
Bsc4I	CCNNNNNNNGG	8 cut(s)	53, 507, 508, 512, 714, 1638, 1654, 1655
Bse118I	RCCGGY	4 cut(s)	212, 813, 1631, 1756
Bse1I	ACTGG	2 cut(s)	567, 1255
Bse3DI	GCAATG	2 cut(s)	1345, 1554
BseAI	TCCGGA	2 cut(s)	467, 1582
BseBI	CCWGG	5 cut(s)	243, 344, 370, 610, 1204
BseCI	ATCGAT	1 cut(s)	1518
BseDI	CCNNGG	4 cut(s)	506, 943, 961, 1236
BseGI	GGATG	4 cut(s)	253, 1123, 1591, 1819
BseLI	CCNNNNNNNGG	8 cut(s)	53, 507, 508, 512, 714, 1638, 1654, 1655
BseMI	GCAATG	2 cut(s)	1345, 1554
BseMII	CTCAG	5 cut(s)	105, 989, 1347, 1494, 1743
BseNI	ACTGG	2 cut(s)	567, 1255
BseRI	GAGGAG	8 cut(s)	74, 85, 376, 386, 932, 1654, 1843, 1944
BseSI	GKGCMC	4 cut(s)	270, 1247, 1440, 1511
BseX3I	CGGCCG	1 cut(s)	133
BseXI	GCAGC	4 cut(s)	785, 1199, 1604, 1704
BseYI	CCCAGC	2 cut(s)	258, 350
Bsh1236I	CGCG	5 cut(s)	562, 576, 594, 806, 1185
Bsh1285I	CGRYCG	3 cut(s)	136, 298, 1429
BshFI	GGCC	8 cut(s)	111, 135, 604, 817, 1182, 1245, 1262, 1509
BshNI	GGYRCC	1 cut(s)	1628
BshTI	ACCGGT	2 cut(s)	212, 1631
BshVI	ATCGAT	1 cut(s)	1518
BsiEI	CGRYCG	3 cut(s)	136, 298, 1429
BsiHKAI	GWGCWC	6 cut(s)	270, 531, 846, 942, 1394, 1941
BsiHKCI	CYCGRG	2 cut(s)	735, 944
BsiWI	CGTACG	2 cut(s)	492, 1785
BslFI	GGGAC	5 cut(s)	435, 524, 1136, 1316, 1873
BslI	CCNNNNNNNGG	8 cut(s)	53, 507, 508, 512, 714, 1638, 1654, 1655
BsmAI	GTCTC	1 cut(s)	1926
BsmBI	CGTCTC	1 cut(s)	1926
BsmFI	GGGAC	5 cut(s)	435, 524, 1136, 1316, 1873
BsnI	GGCC	8 cut(s)	111, 135, 604, 817, 1182, 1245, 1262, 1509
BsoBI	CYCGRG	2 cut(s)	735, 944
Bsp119I	TTCGAA	2 cut(s)	552, 1568
Bsp120I	GGGCCC	2 cut(s)	1243, 1507
Bsp13I	TCCGGA	2 cut(s)	467, 1582
Bsp1720I	GCTNAGC	1 cut(s)	1752
Bsp19I	CCATGG	1 cut(s)	506
Bsp68I	TCGCGA	2 cut(s)	562, 806
BspANI	GGCC	8 cut(s)	111, 135, 604, 817, 1182, 1245, 1262, 1509
BspCNI	CTCAG	5 cut(s)	106, 988, 1348, 1495, 1744
BspDI	ATCGAT	1 cut(s)	1518
BspEI	TCCGGA	2 cut(s)	467, 1582
BspFNI	CGCG	5 cut(s)	562, 576, 594, 806, 1185
BspT104I	TTCGAA	2 cut(s)	552, 1568
BspT107I	GGYRCC	1 cut(s)	1628
BsrBI	CCGCTC	3 cut(s)	1086, 1422, 1740
BsrDI	GCAATG	2 cut(s)	1345, 1554
BsrFI	RCCGGY	4 cut(s)	212, 813, 1631, 1756
BsrI	ACTGG	2 cut(s)	567, 1255
BssAI	RCCGGY	4 cut(s)	212, 813, 1631, 1756
BssECI	CCNNGG	4 cut(s)	506, 943, 961, 1236
BssNI	GRCGYC	3 cut(s)	1329, 1461, 1862
BssSI	CACGAG	4 cut(s)	263, 524, 1284, 1874
BssT1I	CCWWGG	1 cut(s)	506
Bst2BI	CACGAG	4 cut(s)	263, 524, 1284, 1874
Bst2UI	CCWGG	5 cut(s)	243, 344, 370, 610, 1204
Bst4CI	ACNGT	6 cut(s)	22, 37, 449, 515, 1273, 1628
Bst6I	CTCTTC	3 cut(s)	293, 715, 1570
BstACI	GRCGYC	3 cut(s)	1329, 1461, 1862
BstBAI	YACGTR	2 cut(s)	1690, 1801
BstBI	TTCGAA	2 cut(s)	552, 1568
BstC8I	GCNNGC	5 cut(s)	590, 602, 815, 1866, 1907
BstDEI	CTNAG	5 cut(s)	114, 975, 1356, 1503, 1752
BstDSI	CCRYGG	2 cut(s)	506, 961
BstEII	GGTNACC	2 cut(s)	1536, 1547
BstF5I	GGATG	4 cut(s)	253, 1123, 1591, 1819
BstFNI	CGCG	5 cut(s)	562, 576, 594, 806, 1185
BstH2I	RGCGCY	2 cut(s)	121, 1165
BstHHI	GCGC	5 cut(s)	120, 576, 594, 1164, 1187
BstMAI	GTCTC	1 cut(s)	1926
BstMCI	CGRYCG	3 cut(s)	136, 298, 1429
BstMWI	GCNNNNNNNGC	5 cut(s)	117, 161, 663, 1161, 1870
BstNI	CCWGG	5 cut(s)	243, 344, 370, 610, 1204
BstNSI	RCATGY	1 cut(s)	1408
BstPI	GGTNACC	2 cut(s)	1536, 1547
BstSCI	CCNGG	9 cut(s)	241, 277, 342, 368, 608, 672, 817, 1202, 1647
BstSLI	GKGCMC	4 cut(s)	270, 1247, 1440, 1511
BstUI	CGCG	5 cut(s)	562, 576, 594, 806, 1185
BstV1I	GCAGC	4 cut(s)	785, 1199, 1604, 1704
BstV2I	GAAGAC	3 cut(s)	19, 187, 1014
BstX2I	RGATCY	8 cut(s)	281, 346, 497, 697, 885, 1306, 1644, 1957
BstXI	CCANNNNNNTGG	1 cut(s)	700
BstYI	RGATCY	8 cut(s)	281, 346, 497, 697, 885, 1306, 1644, 1957
BstZI	CGGCCG	1 cut(s)	133
Bsu15I	ATCGAT	1 cut(s)	1518
BsuRI	GGCC	8 cut(s)	111, 135, 604, 817, 1182, 1245, 1262, 1509
BsuTUI	ATCGAT	1 cut(s)	1518
BtgI	CCRYGG	2 cut(s)	506, 961
BtgZI	GCGATG	1 cut(s)	543
BtrI	CACGTC	2 cut(s)	1225, 1839
BtsCI	GGATG	4 cut(s)	253, 1123, 1591, 1819
BtsI	GCAGTG	2 cut(s)	757, 1492
BtsIMutI	CAGTG	4 cut(s)	18, 757, 983, 1492
BtuMI	TCGCGA	2 cut(s)	562, 806
Cac8I	GCNNGC	5 cut(s)	590, 602, 815, 1866, 1907
CfoI	GCGC	5 cut(s)	120, 576, 594, 1164, 1187
Cfr10I	RCCGGY	4 cut(s)	212, 813, 1631, 1756
Cfr13I	GGNCC	9 cut(s)	110, 603, 612, 816, 1180, 1243, 1244, 1507, 1508
ClaI	ATCGAT	1 cut(s)	1518
CseI	GACGC	4 cut(s)	1469, 1481, 1598, 1870
CsiI	ACCWGGT	1 cut(s)	608
Csp6I	GTAC	6 cut(s)	493, 578, 1629, 1786, 1798, 1849
CspAI	ACCGGT	2 cut(s)	212, 1631
CviAII	CATG	6 cut(s)	401, 507, 647, 1405, 1525, 1897
CviQI	GTAC	6 cut(s)	493, 578, 1629, 1786, 1798, 1849
DdeI	CTNAG	5 cut(s)	114, 975, 1356, 1503, 1752
DriI	GACNNNNNGTC	1 cut(s)	1405
EaeI	YGGCCR	2 cut(s)	133, 1260
EagI	CGGCCG	1 cut(s)	133
Eam1104I	CTCTTC	3 cut(s)	293, 715, 1570
Eam1105I	GACNNNNNGTC	1 cut(s)	1405
EarI	CTCTTC	3 cut(s)	293, 715, 1570
Ecl136II	GAGCTC	4 cut(s)	529, 844, 940, 1939
EclXI	CGGCCG	1 cut(s)	133
Eco130I	CCWWGG	1 cut(s)	506
Eco24I	GRGCYC	7 cut(s)	531, 756, 846, 942, 1247, 1511, 1941
Eco32I	GATATC	1 cut(s)	541
Eco47I	GGWCC	1 cut(s)	612
Eco47III	AGCGCT	1 cut(s)	1163
Eco52I	CGGCCG	1 cut(s)	133
Eco53kI	GAGCTC	4 cut(s)	529, 844, 940, 1939
Eco57I	CTGAAG	1 cut(s)	1681
Eco72I	CACGTG	1 cut(s)	1690
Eco88I	CYCGRG	2 cut(s)	735, 944
Eco91I	GGTNACC	2 cut(s)	1536, 1547
EcoICRI	GAGCTC	4 cut(s)	529, 844, 940, 1939
EcoO109I	RGGNCCY	2 cut(s)	1507, 1508
EcoO65I	GGTNACC	2 cut(s)	1536, 1547
EcoRII	CCWGG	5 cut(s)	241, 342, 368, 608, 1202
EcoRV	GATATC	1 cut(s)	541
EcoT14I	CCWWGG	1 cut(s)	506
EcoT38I	GRGCYC	7 cut(s)	531, 756, 846, 942, 1247, 1511, 1941
ErhI	CCWWGG	1 cut(s)	506
Esp3I	CGTCTC	1 cut(s)	1926
FaeI	CATG	6 cut(s)	404, 510, 650, 1408, 1528, 1900
FaqI	GGGAC	5 cut(s)	435, 524, 1136, 1316, 1873
FatI	CATG	6 cut(s)	400, 506, 646, 1404, 1524, 1896
FauI	CCCGC	3 cut(s)	229, 460, 1648
FbaI	TGATCA	1 cut(s)	1173
Fnu4HI	GCNGC	8 cut(s)	121, 774, 1087, 1183, 1188, 1593, 1718, 1741
FokI	GGATG	4 cut(s)	240, 1130, 1598, 1826
FriOI	GRGCYC	7 cut(s)	531, 756, 846, 942, 1247, 1511, 1941
Fsp4HI	GCNGC	8 cut(s)	121, 774, 1087, 1183, 1188, 1593, 1718, 1741
FspBI	CTAG	1 cut(s)	1984
GlaI	GCGC	5 cut(s)	119, 575, 593, 1163, 1186
GluI	GCNGC	8 cut(s)	121, 774, 1087, 1183, 1188, 1593, 1718, 1741
GsaI	CCCAGC	2 cut(s)	262, 354
GsuI	CTGGAG	4 cut(s)	722, 1025, 1225, 1380
HaeII	RGCGCY	2 cut(s)	121, 1165
HaeIII	GGCC	8 cut(s)	111, 135, 604, 817, 1182, 1245, 1262, 1509
HgaI	GACGC	4 cut(s)	1469, 1481, 1598, 1870
HhaI	GCGC	5 cut(s)	120, 576, 594, 1164, 1187
Hin1I	GRCGYC	3 cut(s)	1329, 1461, 1862
Hin1II	CATG	6 cut(s)	404, 510, 650, 1408, 1528, 1900
Hin6I	GCGC	5 cut(s)	118, 574, 592, 1162, 1185
HinP1I	GCGC	5 cut(s)	118, 574, 592, 1162, 1185
HincII	GTYRAC	1 cut(s)	1468
HindII	GTYRAC	1 cut(s)	1468
Hpy166II	GTNNAC	3 cut(s)	268, 1468, 1725
Hpy8I	GTNNAC	3 cut(s)	268, 1468, 1725
HpyAV	CCTTC	3 cut(s)	1084, 1201, 1395
HpyCH4III	ACNGT	6 cut(s)	22, 37, 449, 515, 1273, 1628
HpyCH4IV	ACGT	7 cut(s)	866, 1224, 1329, 1611, 1689, 1800, 1838
HpyCH4V	TGCA	3 cut(s)	268, 1283, 1338
HpyF10VI	GCNNNNNNNGC	5 cut(s)	117, 161, 663, 1161, 1870
HpyF3I	CTNAG	5 cut(s)	114, 975, 1356, 1503, 1752
HpySE526I	ACGT	7 cut(s)	866, 1224, 1329, 1611, 1689, 1800, 1838
Hsp92I	GRCGYC	3 cut(s)	1329, 1461, 1862
Hsp92II	CATG	6 cut(s)	404, 510, 650, 1408, 1528, 1900
HspAI	GCGC	5 cut(s)	118, 574, 592, 1162, 1185
Kpn2I	TCCGGA	2 cut(s)	467, 1582
KpnI	GGTACC	1 cut(s)	1632
KroI	GCCGGC	1 cut(s)	813
KroNI	GCCGGC	1 cut(s)	815
Ksp22I	TGATCA	1 cut(s)	1173
LmnI	GCTCC	4 cut(s)	663, 759, 945, 1427
Lsp1109I	GCAGC	4 cut(s)	785, 1199, 1604, 1704
LweI	GCATC	1 cut(s)	566
MabI	ACCWGGT	1 cut(s)	608
MaeI	CTAG	1 cut(s)	1984
MaeII	ACGT	7 cut(s)	866, 1224, 1329, 1611, 1689, 1800, 1838
MaeIII	GTNAC	3 cut(s)	739, 1536, 1547
MbiI	CCGCTC	3 cut(s)	1086, 1422, 1740
MboII	GAAGA	7 cut(s)	19, 187, 280, 702, 1014, 1373, 1557
MflI	RGATCY	8 cut(s)	281, 346, 497, 697, 885, 1306, 1644, 1957
MluCI	AATT	8 cut(s)	158, 473, 826, 898, 999, 1168, 1292, 1496
MmeI	TCCRAC	5 cut(s)	153, 856, 1235, 1409, 1906
MroI	TCCGGA	2 cut(s)	467, 1582
MroNI	GCCGGC	1 cut(s)	813
MseI	TTAA	3 cut(s)	233, 1479, 1499
MslI	CAYNNNNRTG	2 cut(s)	1238, 1878
MspA1I	CMGCKG	2 cut(s)	1128, 1595
MspR9I	CCNGG	9 cut(s)	243, 279, 344, 370, 610, 674, 819, 1204, 1649
MvaI	CCWGG	5 cut(s)	243, 344, 370, 610, 1204
MvnI	CGCG	5 cut(s)	562, 576, 594, 806, 1185
MwoI	GCNNNNNNNGC	5 cut(s)	117, 161, 663, 1161, 1870
NaeI	GCCGGC	1 cut(s)	815
NciI	CCSGG	4 cut(s)	279, 674, 819, 1649
NcoI	CCATGG	1 cut(s)	506
NgoMIV	GCCGGC	1 cut(s)	813
NlaIII	CATG	6 cut(s)	404, 510, 650, 1408, 1528, 1900
NmuCI	GTSAC	3 cut(s)	739, 1536, 1547
NruI	TCGCGA	2 cut(s)	562, 806
NspI	RCATGY	1 cut(s)	1408
NspV	TTCGAA	2 cut(s)	552, 1568
OliI	CACNNNNGTG	2 cut(s)	1238, 1878
PaeR7I	CTCGAG	1 cut(s)	735
PcsI	WCGNNNNNNNCGW	4 cut(s)	270, 549, 872, 1608
PdiI	GCCGGC	1 cut(s)	815
PfeI	GAWTC	8 cut(s)	857, 932, 957, 968, 992, 1054, 1131, 1771
Pfl23II	CGTACG	2 cut(s)	492, 1785
PflFI	GACNNNGTC	2 cut(s)	437, 623
PinAI	ACCGGT	2 cut(s)	212, 1631
PkrI	GCNGC	8 cut(s)	122, 775, 1088, 1184, 1189, 1594, 1719, 1742
PmaCI	CACGTG	1 cut(s)	1690
PmlI	CACGTG	1 cut(s)	1690
Ppu21I	YACGTR	2 cut(s)	1690, 1801
Psp124BI	GAGCTC	4 cut(s)	531, 846, 942, 1941
Psp6I	CCWGG	5 cut(s)	241, 342, 368, 608, 1202
PspCI	CACGTG	1 cut(s)	1690
PspEI	GGTNACC	2 cut(s)	1536, 1547
PspFI	CCCAGC	2 cut(s)	258, 350
PspGI	CCWGG	5 cut(s)	241, 342, 368, 608, 1202
PspLI	CGTACG	2 cut(s)	492, 1785
PspOMI	GGGCCC	2 cut(s)	1243, 1507
PspPI	GGNCC	9 cut(s)	110, 603, 612, 816, 1180, 1243, 1244, 1507, 1508
PspXI	VCTCGAGB	1 cut(s)	735
PsuI	RGATCY	8 cut(s)	281, 346, 497, 697, 885, 1306, 1644, 1957
PsyI	GACNNNGTC	2 cut(s)	437, 623
RruI	TCGCGA	2 cut(s)	562, 806
RsaI	GTAC	6 cut(s)	494, 579, 1630, 1787, 1799, 1850
RsaNI	GTAC	6 cut(s)	493, 578, 1629, 1786, 1798, 1849
RseI	CAYNNNNRTG	2 cut(s)	1238, 1878
SacI	GAGCTC	4 cut(s)	531, 846, 942, 1941
SaqAI	TTAA	3 cut(s)	233, 1479, 1499
SatI	GCNGC	8 cut(s)	121, 774, 1087, 1183, 1188, 1593, 1718, 1741
Sau96I	GGNCC	9 cut(s)	110, 603, 612, 816, 1180, 1243, 1244, 1507, 1508
ScrFI	CCNGG	9 cut(s)	243, 279, 344, 370, 610, 674, 819, 1204, 1649
SexAI	ACCWGGT	1 cut(s)	608
SfaNI	GCATC	1 cut(s)	566
Sfr274I	CTCGAG	1 cut(s)	735
SfuI	TTCGAA	2 cut(s)	552, 1568
SinI	GGWCC	1 cut(s)	612
SlaI	CTCGAG	1 cut(s)	735
SmiMI	CAYNNNNRTG	2 cut(s)	1238, 1878
SmlI	CTYRAG	3 cut(s)	735, 1735, 1940
SmoI	CTYRAG	3 cut(s)	735, 1735, 1940
Sse9I	AATT	8 cut(s)	158, 473, 826, 898, 999, 1168, 1292, 1496
SspI	AATATT	1 cut(s)	1251
SspMI	CTAG	1 cut(s)	1984
SstI	GAGCTC	4 cut(s)	531, 846, 942, 1941
StyD4I	CCNGG	9 cut(s)	241, 277, 342, 368, 608, 672, 817, 1202, 1647
StyI	CCWWGG	1 cut(s)	506
TaaI	ACNGT	6 cut(s)	22, 37, 449, 515, 1273, 1628
TaiI	ACGT	7 cut(s)	869, 1227, 1332, 1614, 1692, 1803, 1841
TaqII	GACCGA	1 cut(s)	312
TasI	AATT	8 cut(s)	158, 473, 826, 898, 999, 1168, 1292, 1496
TauI	GCSGC	4 cut(s)	123, 1089, 1185, 1743
TfiI	GAWTC	8 cut(s)	857, 932, 957, 968, 992, 1054, 1131, 1771
Tru1I	TTAA	3 cut(s)	233, 1479, 1499
Tru9I	TTAA	3 cut(s)	233, 1479, 1499
TscAI	CASTG	4 cut(s)	25, 764, 983, 1492
TseFI	GTSAC	3 cut(s)	739, 1536, 1547
TseI	GCWGC	4 cut(s)	773, 1187, 1592, 1717
Tsp45I	GTSAC	3 cut(s)	739, 1536, 1547
TspDTI	ATGAA	3 cut(s)	17, 187, 1935
TspGWI	ACGGA	5 cut(s)	427, 510, 613, 801, 950
TspRI	CASTG	4 cut(s)	25, 764, 983, 1492
Tth111I	GACNNNGTC	2 cut(s)	437, 623
VneI	GTGCAC	1 cut(s)	266
VpaK11BI	GGWCC	1 cut(s)	612
XapI	RAATTY	5 cut(s)	473, 826, 898, 1168, 1292
XceI	RCATGY	1 cut(s)	1408
XhoI	CTCGAG	1 cut(s)	735
XspI	CTAG	1 cut(s)	1984
ZraI	GACGTC	1 cut(s)	1330

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.