Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0002386

Physical Location & Seq

Genomic Coordinates Reverse (-)

33410181 .. 33412377

Gene Structure 2197 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ45105

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1989 bp

ATGCTTCGTCATTTTGTACCTATAAAATCCACTCTATCCAAAATGGAGCCCAAGGGCACTCTCATCTTCTCCACCGTTGGCCGACCCCACTACGGCTTCGACCTATTCTCCCTCCGCCTCAGCTCCTCCCATCTCCCCCTCGAACACCGCCTCACCGACGGCAAATCTATCAACTTCAACGCCCAATTCTCCCACGACCACCACCAATCCATCGTCTTCATCTCCGAGCGATCCGGGTCGCCCGCCATTTACTTAACCCGACCCGGAATCCCCGACCCCCAACTGCTGCATTCCGTGCCCGGAAGCCTCTTCCACGACCGACCCATCATCAAGAACGGCAAGCTCTACTTCATCTCAGCTCACGAACAGCCCGACCGGCTTTTCAAGAGCTGGTCTGCTCTCTACTCCACTCAGCTTGATGGTGAGAACGAAAGGAAAACCACCCGATTGACTCCGCCCGGGTCTGTCGATTACAGTCCGGCCGTTTCTCTCTCCGGCGAGTTCGTCGCCGTCGCTTCCTACGGCTCTCGTCCCTGGGACGGCGAGTTTCACCAGCTCAATACCGACATCGTCGTCTTCCGAGCCTCACAGCCCGGAGAGCGTGTGGTGGTCTGTGAGCGCGGCGGGTGGCCCACTTGGTCCGGCGACTCCGTCATCTACTTTCACCGCCAAGACGACGACGGGTGGTGGGCCATTTTCCGAATTGACTTCCCCCAGGATTTCGAATCCTCTGCATACCCGTTGACACCCACTCGGGTCACTCCGTCGGGTCTCCACTGCTTCACTCCGGCCGCCATGCACGACGGAAAACGAATCGCCCTCGCCACTCGCCGCCGCGACACGAAGTTCCGACACGTGGAGGTCTTCGACGTCGACACGAAGATGTTCCGTCCGGTCACCTCGACGCTGAACCCGGATTTCCACCACTACAACCCATTTGTTTCCCCGGACTCCGAGTTCCTCGGGTACCACCGATTCCGCGGCGAGTCGACTCAGTGGGGCGGCGAGTCGATCATTCCTCACCTGGAGCCGGTATTGTCTCCTGTCACACATCTCCAAATGCTGAGGCTTCACGGCTTCTTCCCGTCCTTCTCTCCCGACGCCGATCTCGTCGCGTTTAATCCCGATTTCCAAGGAAACACCGGCGTCAAAATCGTCAAGTCCGACGGGTCAAAGTGTTGGACTTTAATCAAAGACCGCACGGCCTTCTACAACTGCTGGAGCCCCACAGAGAGACACGTCATATACACATCCATAGGCCCAATCTTCCAGTCAGCAAAGTACACGGTCCAGATCGCGCGAATCGAGTTTGACCCGTCTGATCTGAACGGTGATAAGGAGGACGTCCCATGCAACGTCAAGATCCTCACTCGCGAAGACACAGGGAATAACGCCTTCGCTTCCTGCTCCCCAGACGGCAAGTCGCTCGTGTTCCGATCCGGTCGGACCGGCCACAAGAACCTCTACATTGTCGACGCCGTTAACGGCGAGTTTAACGGCGGAATCCGTCGGTTGACGGAGGGGCCGTGTATTGATACCATGCCGAGCTGGTCGCCCAGAGGAGACCTCATCGCCTTCTCTTCGAACCGGCACAAACCGAACGATGATGCTGTGTTCAGTATTTACGTCATCAACCCGGACGGCTCGGGGTTACGGAGGATCCACGTGGCGGGAGATGACGTGGACAGGGAGAGGATCAACCACGTGTGCTTTAGTAGGGACGGGGAGTGGCTTCTGTTCACGGCTAACTTGGACGGCGTGACGGCTGAGCCGGTGTCGTTTCCGAACCAGTTTCAGCCGTACGGGGATTTGTACGTGGTGAGACTGGACGGGAGTGGGCTGAGGAGGCTGACGTGGAATGGGTACGAGAATGGCACGCCGACGTGGCACACGGGTGATGAGCTGGACCTGGGGCGGCTGCGTTTGGGTCCTTCCGAAGCTGGAGATAAACTCAAGGGTCAATTTGAAGAACCTCATTGGATTATCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DPPIV_N PD40

Protein Analysis

662

Amino Acids

74.63

Weight (kDa)

6.27

Isoelectric Point (pI)

37.04

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Tricorn_N	PF26549	460 - 554	4.1e-10	Tricorn protease N-terminal beta propeller domain
PD40	PF07676	503 - 543	5.8e-06	WD40-like Beta Propeller Repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002386)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G01870 AT4G01870
fragaria_vesca	FvH4_1g26490
malus_domestica	MD17G1281200.v1.1
prunus_persica	Prupe.3G004400_v2.0.a1
pyrus_communis	pycom09g02860 pycom10g10260 pycom17g27890
rosa_chinensis	RchiOBHm_Chr2g0147951 RchiOBHm_Chr3g0485261 RchiOBHm_Chr3g0486551 RchiOBHm_Chr6g0276991 RchiOBHm_Chr6g0277001
rosa_laevigata	RLG00000023077 RLG00000024900 RLG00000033827
rosa_multiflora	Rmu_sc0000308.1_g000067 Rmu_sc0001260.1_g000030 Rmu_sc0003040.1_g000011 Rmu_sc0003801.1_g000028 Rmu_sc0003801.1_g000029 Rmu_sc0008973.1_g000015 Rmu_sc0011408.1_g000002 Rmu_sc0011408.1_g000004 Rmu_sc0011943.1_g000001 Rmu_sc0032328.1_g000001 Rmu_sc0040736.1_g000001
rosa_roxburghii	Rroxscaffold_2G00138000 Rroxscaffold_4G00302670 Rroxscaffold_5G00344080 Rroxscaffold_5G00373530 Rroxscaffold_6G00395800
rosa_rugosa	Rorug03G0225100
rosa_samantha	Rh3AG275100 Rh3BG310200 Rh3CG309400 Rh3DG306200 Rh4BG238600 Rh6BG152100 Rh6CG318000 Rh6DG302900
rosa_wichuraiana	Rw3G024520

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	572
AatII	GACGTC	2 cut(s)	873, 1347
Acc65I	GGTACC	1 cut(s)	966
AccB1I	GGYRCC	1 cut(s)	966
AccI	GTMKAC	3 cut(s)	873, 989, 1473
AccII	CGCG	7 cut(s)	621, 837, 981, 1115, 1298, 1300, 1374
AclWI	GGATC	6 cut(s)	225, 1357, 1431, 1654, 1667, 1703
AcoI	YGGCCR	4 cut(s)	79, 480, 789, 1450
AcvI	CACGTG	3 cut(s)	856, 1666, 1705
AcyI	GRCGYC	5 cut(s)	870, 1101, 1146, 1344, 1476
AfaI	GTAC	6 cut(s)	18, 968, 1283, 1802, 1814, 1865
AfiI	CCNNNNNNNGG	5 cut(s)	92, 539, 856, 1030, 1669
AflIII	ACRYGT	3 cut(s)	853, 1237, 1704
AgsI	TTSAA	3 cut(s)	178, 385, 1967
AhdI	GACNNNNNGTC	1 cut(s)	1420
AjiI	CACGTC	4 cut(s)	1240, 1681, 1854, 1884
AjnI	CCWGG	4 cut(s)	533, 714, 1023, 1908
AleI	CACNNNNGTG	1 cut(s)	1893
AloI	GAACNNNNNNTCC	2 cut(s)	941, 973
AluBI	AGCT	9 cut(s)	123, 343, 359, 390, 415, 556, 1548, 1903, 1940
AluI	AGCT	9 cut(s)	123, 343, 359, 390, 415, 556, 1548, 1903, 1940
Alw26I	GTCTC	5 cut(s)	776, 1044, 1228, 1557, 1816
AlwI	GGATC	6 cut(s)	225, 1357, 1431, 1654, 1667, 1703
Ama87I	CYCGRG	4 cut(s)	458, 753, 962, 1645
AoxI	GGCC	9 cut(s)	79, 480, 629, 690, 789, 1203, 1258, 1450, 1523
ApeKI	GCWGC	2 cut(s)	286, 1918
Asp700I	GAANNNNTTC	1 cut(s)	884
Asp718I	GGTACC	1 cut(s)	966
AspLEI	GCGC	2 cut(s)	621, 1300
AspS9I	GGNCC	9 cut(s)	630, 639, 690, 1259, 1288, 1446, 1523, 1906, 1928
AsuC2I	CCSGG	9 cut(s)	235, 264, 300, 459, 460, 594, 914, 947, 1637
AsuHPI	GGTGA	9 cut(s)	145, 434, 542, 656, 889, 1013, 1343, 1831, 1907
AsuII	TTCGAA	2 cut(s)	723, 1583
AvaI	CYCGRG	4 cut(s)	458, 753, 962, 1645
AvaII	GGWCC	5 cut(s)	639, 1288, 1446, 1906, 1928
BaeGI	GKGCMC	2 cut(s)	59, 300
BamHI	GGATCC	1 cut(s)	1659
BanI	GGYRCC	1 cut(s)	966
BanII	GRGCYC	2 cut(s)	51, 1226
BauI	CACGAG	1 cut(s)	1427
BbrPI	CACGTG	3 cut(s)	856, 1666, 1705
BbsI	GAAGAC	4 cut(s)	208, 568, 856, 1383
BbvCI	CCTCAGC	3 cut(s)	119, 1064, 1841
BbvI	GCAGC	2 cut(s)	273, 1905
BccI	CCATC	4 cut(s)	138, 218, 332, 413
BcgI	CGANNNNNNTGC	4 cut(s)	713, 747, 1408, 1442
BciT130I	CCWGG	4 cut(s)	535, 716, 1025, 1910
BcnI	CCSGG	9 cut(s)	235, 264, 300, 459, 460, 594, 914, 947, 1637
BcoDI	GTCTC	5 cut(s)	776, 1044, 1228, 1557, 1816
BglI	GCCNNNNNGGC	2 cut(s)	376, 1885
BisI	GCNGC	9 cut(s)	287, 622, 792, 832, 835, 982, 1003, 1916, 1919
BlpI	GCTNAGC	1 cut(s)	1767
BlsI	GCNGC	9 cut(s)	288, 623, 793, 833, 836, 983, 1004, 1917, 1920
Bme18I	GGWCC	5 cut(s)	639, 1288, 1446, 1906, 1928
BmeRI	GACNNNNNGTC	1 cut(s)	1420
BmeT110I	CYCGRG	4 cut(s)	458, 753, 962, 1645
BmgBI	CACGTC	4 cut(s)	1240, 1681, 1854, 1884
BmgT120I	GGNCC	9 cut(s)	630, 639, 690, 1259, 1288, 1446, 1523, 1906, 1928
BmiI	GGNNCC	7 cut(s)	48, 968, 1029, 1223, 1524, 1661, 1929
BmsI	GCATC	1 cut(s)	1597
BpiI	GAAGAC	4 cut(s)	208, 568, 856, 1383
BplI	GAGNNNNNCTC	4 cut(s)	1551, 1583, 1935, 1967
BpmI	CTGGAG	3 cut(s)	1046, 1240, 1962
Bpu10I	CCTNAGC	3 cut(s)	119, 1064, 1841
Bpu1102I	GCTNAGC	1 cut(s)	1767
Bpu14I	TTCGAA	2 cut(s)	723, 1583
BpuEI	CTTGAG	1 cut(s)	1937
BpuMI	CCSGG	9 cut(s)	235, 264, 300, 459, 460, 594, 914, 947, 1637
BsaAI	YACGTR	4 cut(s)	856, 1666, 1705, 1816
BsaHI	GRCGYC	5 cut(s)	870, 1101, 1146, 1344, 1476
BsaI	GGTCTC	2 cut(s)	776, 1557
BsaWI	WCCGGW	2 cut(s)	892, 1439
BsaXI	ACNNNNNCTCC	8 cut(s)	92, 122, 588, 618, 1511, 1541, 1665, 1695
Bsc4I	CCNNNNNNNGG	5 cut(s)	92, 539, 856, 1030, 1669
Bse118I	RCCGGY	6 cut(s)	375, 1030, 1142, 1448, 1587, 1771
Bse1I	ACTGG	3 cut(s)	1270, 1789, 1830
BseBI	CCWGG	4 cut(s)	535, 716, 1025, 1910
BseGI	GGATG	1 cut(s)	1250
BseLI	CCNNNNNNNGG	5 cut(s)	92, 539, 856, 1030, 1669
BseMII	CTCAG	7 cut(s)	133, 369, 425, 1007, 1055, 1758, 1832
BseNI	ACTGG	3 cut(s)	1270, 1789, 1830
BseRI	GAGGAG	3 cut(s)	115, 1575, 1858
BseSI	GKGCMC	2 cut(s)	59, 300
BseX3I	CGGCCG	2 cut(s)	480, 789
BseXI	GCAGC	2 cut(s)	273, 1905
Bsh1236I	CGCG	7 cut(s)	621, 837, 981, 1115, 1298, 1300, 1374
Bsh1285I	CGRYCG	5 cut(s)	319, 376, 483, 792, 1444
BshFI	GGCC	9 cut(s)	81, 482, 631, 692, 791, 1205, 1260, 1452, 1525
BshNI	GGYRCC	1 cut(s)	966
BsiEI	CGRYCG	5 cut(s)	319, 376, 483, 792, 1444
BsiHKCI	CYCGRG	4 cut(s)	458, 753, 962, 1645
BsiWI	CGTACG	1 cut(s)	1800
BslFI	GGGAC	4 cut(s)	516, 551, 1331, 1733
BslI	CCNNNNNNNGG	5 cut(s)	92, 539, 856, 1030, 1669
BsmAI	GTCTC	5 cut(s)	776, 1044, 1228, 1557, 1816
BsmFI	GGGAC	4 cut(s)	516, 551, 1331, 1733
BsmI	GAATGC	1 cut(s)	289
BsnI	GGCC	9 cut(s)	81, 482, 631, 692, 791, 1205, 1260, 1452, 1525
Bso31I	GGTCTC	2 cut(s)	776, 1557
BsoBI	CYCGRG	4 cut(s)	458, 753, 962, 1645
Bsp119I	TTCGAA	2 cut(s)	723, 1583
Bsp1286I	GDGCHC	4 cut(s)	51, 59, 300, 1226
Bsp143I	GATC	9 cut(s)	230, 1011, 1105, 1293, 1321, 1362, 1436, 1659, 1695
Bsp1720I	GCTNAGC	1 cut(s)	1767
Bsp68I	TCGCGA	1 cut(s)	1374
BspANI	GGCC	9 cut(s)	81, 482, 631, 692, 791, 1205, 1260, 1452, 1525
BspCNI	CTCAG	7 cut(s)	132, 368, 424, 1006, 1056, 1759, 1833
BspFNI	CGCG	7 cut(s)	621, 837, 981, 1115, 1298, 1300, 1374
BspLI	GGNNCC	7 cut(s)	48, 968, 1029, 1223, 1524, 1661, 1929
BspPI	GGATC	6 cut(s)	225, 1357, 1431, 1654, 1667, 1703
BspT104I	TTCGAA	2 cut(s)	723, 1583
BspT107I	GGYRCC	1 cut(s)	966
BspTNI	GGTCTC	2 cut(s)	776, 1557
BsrFI	RCCGGY	6 cut(s)	375, 1030, 1142, 1448, 1587, 1771
BsrI	ACTGG	3 cut(s)	1270, 1789, 1830
BssAI	RCCGGY	6 cut(s)	375, 1030, 1142, 1448, 1587, 1771
BssMI	GATC	9 cut(s)	230, 1011, 1105, 1293, 1321, 1362, 1436, 1659, 1695
BssNI	GRCGYC	5 cut(s)	870, 1101, 1146, 1344, 1476
BssSI	CACGAG	1 cut(s)	1427
BssT1I	CCWWGG	2 cut(s)	51, 1132
Bst2BI	CACGAG	1 cut(s)	1427
Bst2UI	CCWGG	4 cut(s)	535, 716, 1025, 1910
Bst4CI	ACNGT	4 cut(s)	76, 476, 1288, 1331
Bst6I	CTCTTC	2 cut(s)	314, 1585
BstACI	GRCGYC	5 cut(s)	870, 1101, 1146, 1344, 1476
BstAPI	GCANNNNNTGC	1 cut(s)	295
BstBAI	YACGTR	4 cut(s)	856, 1666, 1705, 1816
BstBI	TTCGAA	2 cut(s)	723, 1583
BstC8I	GCNNGC	3 cut(s)	243, 341, 1877
BstDEI	CTNAG	7 cut(s)	119, 355, 411, 993, 1064, 1767, 1841
BstDSI	CCRYGG	1 cut(s)	979
BstEII	GGTNACC	1 cut(s)	895
BstF5I	GGATG	1 cut(s)	1250
BstFNI	CGCG	7 cut(s)	621, 837, 981, 1115, 1298, 1300, 1374
BstHHI	GCGC	2 cut(s)	621, 1300
BstKTI	GATC	9 cut(s)	233, 1014, 1108, 1296, 1324, 1365, 1439, 1662, 1698
BstMAI	GTCTC	5 cut(s)	776, 1044, 1228, 1557, 1816
BstMBI	GATC	9 cut(s)	230, 1011, 1105, 1293, 1321, 1362, 1436, 1659, 1695
BstMCI	CGRYCG	5 cut(s)	319, 376, 483, 792, 1444
BstMWI	GCNNNNNNNGC	5 cut(s)	295, 376, 598, 1846, 1885
BstNI	CCWGG	4 cut(s)	535, 716, 1025, 1910
BstPI	GGTNACC	1 cut(s)	895
BstSLI	GKGCMC	2 cut(s)	59, 300
BstUI	CGCG	7 cut(s)	621, 837, 981, 1115, 1298, 1300, 1374
BstV1I	GCAGC	2 cut(s)	273, 1905
BstV2I	GAAGAC	4 cut(s)	208, 568, 856, 1383
BstX2I	RGATCY	2 cut(s)	1362, 1659
BstYI	RGATCY	2 cut(s)	1362, 1659
BstZI	CGGCCG	2 cut(s)	480, 789
BsuRI	GGCC	9 cut(s)	81, 482, 631, 692, 791, 1205, 1260, 1452, 1525
BtgI	CCRYGG	1 cut(s)	979
BtgZI	GCGATG	1 cut(s)	1555
BtrI	CACGTC	4 cut(s)	1240, 1681, 1854, 1884
BtsCI	GGATG	1 cut(s)	1250
BtsI	GCAGTG	1 cut(s)	775
BtsIMutI	CAGTG	2 cut(s)	775, 1001
BtuMI	TCGCGA	1 cut(s)	1374
Cac8I	GCNNGC	3 cut(s)	243, 341, 1877
CfoI	GCGC	2 cut(s)	621, 1300
Cfr10I	RCCGGY	6 cut(s)	375, 1030, 1142, 1448, 1587, 1771
Cfr13I	GGNCC	9 cut(s)	630, 639, 690, 1259, 1288, 1446, 1523, 1906, 1928
Cfr42I	CCGCGG	1 cut(s)	982
Cfr9I	CCCGGG	1 cut(s)	458
CpoI	CGGWCCG	1 cut(s)	1446
CseI	GACGC	4 cut(s)	913, 1109, 1135, 1484
Csp6I	GTAC	6 cut(s)	17, 967, 1282, 1801, 1813, 1864
CspCI	CAANNNNNGTGG	2 cut(s)	397, 432
CspI	CGGWCCG	1 cut(s)	1446
CviAII	CATG	3 cut(s)	796, 1350, 1540
CviQI	GTAC	6 cut(s)	17, 967, 1282, 1801, 1813, 1864
DdeI	CTNAG	7 cut(s)	119, 355, 411, 993, 1064, 1767, 1841
DpnI	GATC	9 cut(s)	232, 1013, 1107, 1295, 1323, 1364, 1438, 1661, 1697
DpnII	GATC	9 cut(s)	230, 1011, 1105, 1293, 1321, 1362, 1436, 1659, 1695
DrdI	GACNNNNNNGTC	1 cut(s)	572
DriI	GACNNNNNGTC	1 cut(s)	1420
DseDI	GACNNNNNNGTC	1 cut(s)	572
EaeI	YGGCCR	4 cut(s)	79, 480, 789, 1450
EagI	CGGCCG	2 cut(s)	480, 789
Eam1104I	CTCTTC	2 cut(s)	314, 1585
Eam1105I	GACNNNNNGTC	1 cut(s)	1420
EarI	CTCTTC	2 cut(s)	314, 1585
EciI	GGCGGA	3 cut(s)	104, 444, 1515
EclXI	CGGCCG	2 cut(s)	480, 789
Eco130I	CCWWGG	2 cut(s)	51, 1132
Eco24I	GRGCYC	2 cut(s)	51, 1226
Eco31I	GGTCTC	2 cut(s)	776, 1557
Eco47I	GGWCC	5 cut(s)	639, 1288, 1446, 1906, 1928
Eco52I	CGGCCG	2 cut(s)	480, 789
Eco72I	CACGTG	3 cut(s)	856, 1666, 1705
Eco88I	CYCGRG	4 cut(s)	458, 753, 962, 1645
Eco91I	GGTNACC	1 cut(s)	895
EcoO109I	RGGNCCY	1 cut(s)	1928
EcoO65I	GGTNACC	1 cut(s)	895
EcoRII	CCWGG	4 cut(s)	533, 714, 1023, 1908
EcoT14I	CCWWGG	2 cut(s)	51, 1132
EcoT38I	GRGCYC	2 cut(s)	51, 1226
ErhI	CCWWGG	2 cut(s)	51, 1132
FaeI	CATG	3 cut(s)	799, 1353, 1543
FaiI	YATR	8 cut(s)	23, 736, 797, 1244, 1246, 1256, 1351, 1541
FalI	AAGNNNNNCTT	2 cut(s)	332, 364
FaqI	GGGAC	4 cut(s)	516, 551, 1331, 1733
FatI	CATG	3 cut(s)	795, 1349, 1539
FauI	CCCGC	3 cut(s)	250, 617, 1663
FblI	GTMKAC	3 cut(s)	873, 989, 1473
Fnu4HI	GCNGC	9 cut(s)	287, 622, 792, 832, 835, 982, 1003, 1916, 1919
FokI	GGATG	1 cut(s)	1237
FriOI	GRGCYC	2 cut(s)	51, 1226
Fsp4HI	GCNGC	9 cut(s)	287, 622, 792, 832, 835, 982, 1003, 1916, 1919
GlaI	GCGC	2 cut(s)	620, 1299
GluI	GCNGC	9 cut(s)	287, 622, 792, 832, 835, 982, 1003, 1916, 1919
GsuI	CTGGAG	3 cut(s)	1046, 1240, 1962
HaeIII	GGCC	9 cut(s)	81, 482, 631, 692, 791, 1205, 1260, 1452, 1525
HgaI	GACGC	4 cut(s)	913, 1109, 1135, 1484
HhaI	GCGC	2 cut(s)	621, 1300
Hin1I	GRCGYC	5 cut(s)	870, 1101, 1146, 1344, 1476
Hin1II	CATG	3 cut(s)	799, 1353, 1543
Hin6I	GCGC	2 cut(s)	619, 1298
HinP1I	GCGC	2 cut(s)	619, 1298
HincII	GTYRAC	6 cut(s)	744, 874, 990, 1474, 1483, 1515
HindII	GTYRAC	6 cut(s)	744, 874, 990, 1474, 1483, 1515
HpaI	GTTAAC	1 cut(s)	1483
HphI	GGTGA	9 cut(s)	145, 434, 542, 656, 889, 1013, 1343, 1831, 1907
Hpy166II	GTNNAC	9 cut(s)	744, 874, 990, 1284, 1474, 1483, 1515, 1684, 1740
Hpy188III	TCNNGA	8 cut(s)	331, 362, 385, 1097, 1124, 1291, 1360, 1373
Hpy8I	GTNNAC	9 cut(s)	744, 874, 990, 1284, 1474, 1483, 1515, 1684, 1740
HpyAV	CCTTC	5 cut(s)	1099, 1216, 1405, 1585, 1941
HpyCH4III	ACNGT	4 cut(s)	76, 476, 1288, 1331
HpyCH4V	TGCA	4 cut(s)	289, 734, 799, 1353
HpyF10VI	GCNNNNNNNGC	5 cut(s)	295, 376, 598, 1846, 1885
HpyF3I	CTNAG	7 cut(s)	119, 355, 411, 993, 1064, 1767, 1841
Hsp92I	GRCGYC	5 cut(s)	870, 1101, 1146, 1344, 1476
Hsp92II	CATG	3 cut(s)	799, 1353, 1543
HspAI	GCGC	2 cut(s)	619, 1298
KpnI	GGTACC	1 cut(s)	970
KspAI	GTTAAC	1 cut(s)	1483
KspI	CCGCGG	1 cut(s)	982
Kzo9I	GATC	9 cut(s)	230, 1011, 1105, 1293, 1321, 1362, 1436, 1659, 1695
LmnI	GCTCC	5 cut(s)	46, 128, 1027, 1221, 1412
Lsp1109I	GCAGC	2 cut(s)	273, 1905
LweI	GCATC	1 cut(s)	1597
MaeIII	GTNAC	5 cut(s)	757, 895, 1045, 1650, 1759
MalI	GATC	9 cut(s)	232, 1013, 1107, 1295, 1323, 1364, 1438, 1661, 1697
MboI	GATC	9 cut(s)	230, 1011, 1105, 1293, 1321, 1362, 1436, 1659, 1695
MflI	RGATCY	2 cut(s)	1362, 1659
MhlI	GDGCHC	4 cut(s)	51, 59, 300, 1226
MluCI	AATT	3 cut(s)	185, 702, 1961
MlyI	GAGTC	6 cut(s)	445, 641, 944, 985, 995, 1016
MmeI	TCCRAC	4 cut(s)	874, 1160, 1188, 1424
MroXI	GAANNNNTTC	1 cut(s)	884
MseI	TTAA	5 cut(s)	254, 1119, 1187, 1482, 1494
MslI	CAYNNNNRTG	2 cut(s)	881, 1893
MspA1I	CMGCKG	1 cut(s)	981
Mva1269I	GAATGC	1 cut(s)	289
MvaI	CCWGG	4 cut(s)	535, 716, 1025, 1910
MvnI	CGCG	7 cut(s)	621, 837, 981, 1115, 1298, 1300, 1374
MwoI	GCNNNNNNNGC	5 cut(s)	295, 376, 598, 1846, 1885
NciI	CCSGG	9 cut(s)	235, 264, 300, 459, 460, 594, 914, 947, 1637
NdeII	GATC	9 cut(s)	230, 1011, 1105, 1293, 1321, 1362, 1436, 1659, 1695
NlaIII	CATG	3 cut(s)	799, 1353, 1543
NlaIV	GGNNCC	7 cut(s)	48, 968, 1029, 1223, 1524, 1661, 1929
NmeAIII	GCCGAG	1 cut(s)	1569
NmuCI	GTSAC	4 cut(s)	757, 895, 1045, 1759
NruI	TCGCGA	1 cut(s)	1374
NspV	TTCGAA	2 cut(s)	723, 1583
OliI	CACNNNNGTG	1 cut(s)	1893
PasI	CCCWGGG	1 cut(s)	534
PcsI	WCGNNNNNNNCGW	5 cut(s)	369, 1107, 1161, 1302, 1523
PctI	GAATGC	1 cut(s)	289
PdmI	GAANNNNTTC	1 cut(s)	884
PfeI	GAWTC	6 cut(s)	267, 725, 813, 975, 1302, 1503
Pfl23II	CGTACG	1 cut(s)	1800
PflFI	GACNNNGTC	2 cut(s)	569, 650
PkrI	GCNGC	9 cut(s)	288, 623, 793, 833, 836, 983, 1004, 1917, 1920
PleI	GAGTC	6 cut(s)	445, 641, 944, 985, 994, 1015
PmaCI	CACGTG	3 cut(s)	856, 1666, 1705
PmlI	CACGTG	3 cut(s)	856, 1666, 1705
PpsI	GAGTC	6 cut(s)	445, 641, 944, 985, 994, 1015
Ppu21I	YACGTR	4 cut(s)	856, 1666, 1705, 1816
PpuMI	RGGWCCY	1 cut(s)	1928
Psp5II	RGGWCCY	1 cut(s)	1928
Psp6I	CCWGG	4 cut(s)	533, 714, 1023, 1908
PspCI	CACGTG	3 cut(s)	856, 1666, 1705
PspEI	GGTNACC	1 cut(s)	895
PspGI	CCWGG	4 cut(s)	533, 714, 1023, 1908
PspLI	CGTACG	1 cut(s)	1800
PspN4I	GGNNCC	7 cut(s)	48, 968, 1029, 1223, 1524, 1661, 1929
PspPI	GGNCC	9 cut(s)	630, 639, 690, 1259, 1288, 1446, 1523, 1906, 1928
PspPPI	RGGWCCY	1 cut(s)	1928
PsuI	RGATCY	2 cut(s)	1362, 1659
PsyI	GACNNNGTC	2 cut(s)	569, 650
RruI	TCGCGA	1 cut(s)	1374
RsaI	GTAC	6 cut(s)	18, 968, 1283, 1802, 1814, 1865
RsaNI	GTAC	6 cut(s)	17, 967, 1282, 1801, 1813, 1864
RseI	CAYNNNNRTG	2 cut(s)	881, 1893
Rsr2I	CGGWCCG	1 cut(s)	1446
RsrII	CGGWCCG	1 cut(s)	1446
SacII	CCGCGG	1 cut(s)	982
SalI	GTCGAC	3 cut(s)	872, 988, 1472
SaqAI	TTAA	5 cut(s)	254, 1119, 1187, 1482, 1494
SatI	GCNGC	9 cut(s)	287, 622, 792, 832, 835, 982, 1003, 1916, 1919
Sau3AI	GATC	9 cut(s)	230, 1011, 1105, 1293, 1321, 1362, 1436, 1659, 1695
Sau96I	GGNCC	9 cut(s)	630, 639, 690, 1259, 1288, 1446, 1523, 1906, 1928
SchI	GAGTC	6 cut(s)	445, 641, 944, 985, 995, 1016
SduI	GDGCHC	4 cut(s)	51, 59, 300, 1226
SfaNI	GCATC	1 cut(s)	1597
Sfr303I	CCGCGG	1 cut(s)	982
SfuI	TTCGAA	2 cut(s)	723, 1583
SgrAI	CRCCGGYG	1 cut(s)	1142
SgrBI	CCGCGG	1 cut(s)	982
SinI	GGWCC	5 cut(s)	639, 1288, 1446, 1906, 1928
SmaI	CCCGGG	1 cut(s)	460
SmiMI	CAYNNNNRTG	2 cut(s)	881, 1893
SmlI	CTYRAG	1 cut(s)	1952
SmoI	CTYRAG	1 cut(s)	1952
Sse9I	AATT	3 cut(s)	185, 702, 1961
StyI	CCWWGG	2 cut(s)	51, 1132
TaaI	ACNGT	4 cut(s)	76, 476, 1288, 1331
TaqII	GACCGA	1 cut(s)	333
TasI	AATT	3 cut(s)	185, 702, 1961
TatI	WGTACW	1 cut(s)	1281
TauI	GCSGC	7 cut(s)	624, 794, 834, 837, 984, 1005, 1918
TfiI	GAWTC	6 cut(s)	267, 725, 813, 975, 1302, 1503
Tru1I	TTAA	5 cut(s)	254, 1119, 1187, 1482, 1494
Tru9I	TTAA	5 cut(s)	254, 1119, 1187, 1482, 1494
TscAI	CASTG	2 cut(s)	782, 1001
TseFI	GTSAC	4 cut(s)	757, 895, 1045, 1759
TseI	GCWGC	2 cut(s)	286, 1918
Tsp45I	GTSAC	4 cut(s)	757, 895, 1045, 1759
TspDTI	ATGAA	2 cut(s)	208, 340
TspGWI	ACGGA	8 cut(s)	283, 640, 753, 819, 878, 1496, 1532, 1669
TspMI	CCCGGG	1 cut(s)	458
TspRI	CASTG	2 cut(s)	782, 1001
Tth111I	GACNNNGTC	2 cut(s)	569, 650
VpaK11BI	GGWCC	5 cut(s)	639, 1288, 1446, 1906, 1928
XmaI	CCCGGG	1 cut(s)	458
XmiI	GTMKAC	3 cut(s)	873, 989, 1473
XmnI	GAANNNNTTC	1 cut(s)	884
ZraI	GACGTC	2 cut(s)	871, 1345

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.