Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr3C

Orthogroup ID

OG0002386

Physical Location & Seq

Genomic Coordinates Reverse (-)

32491758 .. 32493749

Gene Structure 1992 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh3CG309400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1992 bp

ATGCTTCGTCATTTTGTACCTATAAAATCCACTCTATCCAAAATGGAGCCCAAGGGCACTCTCATCTTCTCCACCGTTGGCCGACCCCACTACGGCTTCGACCTATTCTCCCTCCGCCTCAGCTCCTCCCATCTCCCCCTCGAACACCGCCTCACCGACGGCAAATCCATCAACTTCAACGCCCAATTCTCCCACGACGACCACCACCAATCCATCGTCTTCATCTCCGAGCGAACCGGGTCGCCCGCCATTTACTTAACCCGACCCGGAATCCCCGACCCCCAACTGCTGCATTCCGTTCCCGGGAGCCTCTTCCACGACCGACCCATCATCAAGAACGGCAAGCTCTACTTCATCTCAGCTCACGAACAGCCCGACCGGCTTTTCAAGAGCTGGTCTGCTCTCTACTCCACTGAACTTGATGATGAGAGCGAAAGGAAAACCACCCGATTGACTCCGCCCGGGTCTTTCGATTACAGTCCGGCAGTTTCTCTCTCCGGCGAGTTCGTCGCCGTCGCTTCGTACGGCTCTCGTCCCTGGGACGGCGAGTTTCACCAGCTCAACACCGACATCGTCGTCTTCCGAGCTTCACAGCCCGGAAAGCGTGTAGTGGTCTGTGAGCGCGGCGGGTGGCCCACTTGGTCCGGCGACTCCGTCATCTACTTTCACCGCCAAGACGACGACGGCTGCTGGGCCATTTTCCGAATTGATTTCCCCCAAGATTTCGAATCCTCTGCATACCCGTTGACTCCCACCCGGGTCACTCCGTCGGGTCTCCACTGCTTCACTCCGGCCGCCATGCACGACGGAAAACGAATCGCCCTCGCCACTCGCCGCCGCGACACGAAGTTCCGACACGTGGAGGTCTTCGATGTCGACACGAAGACGTTCCGTCCGGTCACCTCGATGCTGAACCCGGATTTCCACCACTACAACCCGTTTGTTTCCCCGGACTCCGAGTTCCTCGGGTACCACCGATTCCGCGGCGAGTCGACTCAGTGGGGCGGCGAGTCGATCATTCCTCACCTGGAGCCGGTGTCATCTCCCGTCACACATCTCCAAATGCTGAGGCTTCACGGCTTCTTCCCGACCTTCTCTCCCGACGCCGATCTCGTCGCGTTTAATCCCGATTTCCAAGGAAACACCGGCGTCAAAATCGTCAAGTCCGACGGGTCAAAGTGTTGGACTTTAATCAAAGACCGCACGGCCTTCTACAACTGCTGGAGCCCCACAGAGAGACACGTCATATACACATCCATAGGCCCAATCTTCCAGTCAGCAAAGTACACGGTCCAGATCGCGCGAATCGAGTTTGACCCGTCTGATCTGAACGGTGATAAGGAGGACGTCCCATGCAACGTTAAGATCCTCACTCGCGAAGACACAGGGAATAACGCCTTCGCTTCCTGCTCCCCAGACGGCAAGTCGCTCGTGTTCCGATCCGGTCGGACCGGCCACAAGAACCTCTACATTGTCGACGCCGTTAACGGCGAGTTTAACGGCGGAATCCGTCGGTTGACGGAGGGGCCGTGTATTGATACCATGCCGAGCTGGTCGCCCAGAGGAGACCTCATCGCCTTCTCTTCGAACCGGCACAAACCGCACGATGATGCTGTGTTCAGCATTTACGTCATCAACCCGGACGGCTCGGGGTTACGGAGGATCCACGTGGCGGGAGATGACGTGGACAGGGAGAGGATCAACCACGTGTGCTTTAGTAGCGACGGGGAGTGGCTGCTGTTCACGGCTAACTTGGACGGCGTGACGGCTGAGCCGGTGTCGTTTCCGAACCAGTTTCAGCCGTACGGGGATTTGTACGTGGTGAGATTGGACGGGAGTGGGCTGAGGAGGCTGACGTGGAATGGGTACGAGAATGGCACGCCGACGTGGCACACGGGTGATGAGCTGGACCTGGGGCGGCTGCGTTTGGGTCCTTCCGAAGCTGGAGATAAACTCAAGGGTCAATTTGACGAACCTCATTGGATTATCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DPPIV_N PD40

Protein Analysis

663

Amino Acids

74.68

Weight (kDa)

6.18

Isoelectric Point (pI)

37.95

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Tricorn_N	PF26549	461 - 582	4.8e-11	Tricorn protease N-terminal beta propeller domain
PD40	PF07676	504 - 544	1e-05	WD40-like Beta Propeller Repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002386)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G01870 AT4G01870
fragaria_vesca	FvH4_1g26490
malus_domestica	MD17G1281200.v1.1
prunus_persica	Prupe.3G004400_v2.0.a1
pyrus_communis	pycom09g02860 pycom10g10260 pycom17g27890
rosa_chinensis	RchiOBHm_Chr2g0147951 RchiOBHm_Chr3g0485261 RchiOBHm_Chr3g0486551 RchiOBHm_Chr6g0276991 RchiOBHm_Chr6g0277001
rosa_laevigata	RLG00000023077 RLG00000024900 RLG00000033827
rosa_multiflora	Rmu_sc0000308.1_g000067 Rmu_sc0001260.1_g000030 Rmu_sc0003040.1_g000011 Rmu_sc0003801.1_g000028 Rmu_sc0003801.1_g000029 Rmu_sc0008973.1_g000015 Rmu_sc0011408.1_g000002 Rmu_sc0011408.1_g000004 Rmu_sc0011943.1_g000001 Rmu_sc0032328.1_g000001 Rmu_sc0040736.1_g000001
rosa_roxburghii	Rroxscaffold_2G00138000 Rroxscaffold_4G00302670 Rroxscaffold_5G00344080 Rroxscaffold_5G00373530 Rroxscaffold_6G00395800
rosa_rugosa	Rorug03G0225100
rosa_samantha	Rh3AG275100 Rh3BG310200 Rh3CG309400 Rh3DG306200 Rh4BG238600 Rh6BG152100 Rh6CG318000 Rh6DG302900
rosa_wichuraiana	Rw3G024520

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	575
AatII	GACGTC	1 cut(s)	1350
Acc65I	GGTACC	1 cut(s)	969
AccB1I	GGYRCC	1 cut(s)	969
AccI	GTMKAC	3 cut(s)	876, 992, 1476
AccII	CGCG	7 cut(s)	624, 840, 984, 1118, 1301, 1303, 1377
AclI	AACGTT	1 cut(s)	1359
AclWI	GGATC	5 cut(s)	1360, 1434, 1657, 1670, 1706
AcoI	YGGCCR	3 cut(s)	79, 792, 1453
AcvI	CACGTG	3 cut(s)	859, 1669, 1708
AcyI	GRCGYC	4 cut(s)	1104, 1149, 1347, 1479
AfaI	GTAC	7 cut(s)	18, 524, 971, 1286, 1805, 1817, 1868
AfiI	CCNNNNNNNGG	6 cut(s)	92, 303, 542, 859, 1033, 1672
AflIII	ACRYGT	3 cut(s)	856, 1240, 1707
AgsI	TTSAA	2 cut(s)	178, 388
AhdI	GACNNNNNGTC	2 cut(s)	891, 1423
AjiI	CACGTC	4 cut(s)	1243, 1684, 1857, 1887
AjnI	CCWGG	3 cut(s)	536, 1026, 1911
AleI	CACNNNNGTG	1 cut(s)	1896
AloI	GAACNNNNNNTCC	2 cut(s)	944, 976
AluBI	AGCT	9 cut(s)	123, 346, 362, 393, 559, 587, 1551, 1906, 1943
AluI	AGCT	9 cut(s)	123, 346, 362, 393, 559, 587, 1551, 1906, 1943
Alw26I	GTCTC	3 cut(s)	779, 1231, 1560
AlwI	GGATC	5 cut(s)	1360, 1434, 1657, 1670, 1706
Ama87I	CYCGRG	5 cut(s)	302, 461, 756, 965, 1648
AoxI	GGCC	8 cut(s)	79, 632, 693, 792, 1206, 1261, 1453, 1526
ApeKI	GCWGC	4 cut(s)	289, 687, 1735, 1921
Asp700I	GAANNNNTTC	1 cut(s)	887
Asp718I	GGTACC	1 cut(s)	969
AspLEI	GCGC	2 cut(s)	624, 1303
AspS9I	GGNCC	9 cut(s)	633, 642, 693, 1262, 1291, 1449, 1526, 1909, 1931
AsuHPI	GGTGA	8 cut(s)	145, 545, 659, 892, 1016, 1346, 1834, 1910
AsuII	TTCGAA	2 cut(s)	726, 1586
AvaI	CYCGRG	5 cut(s)	302, 461, 756, 965, 1648
AvaII	GGWCC	5 cut(s)	642, 1291, 1449, 1909, 1931
BaeGI	GKGCMC	1 cut(s)	59
BamHI	GGATCC	1 cut(s)	1662
BanI	GGYRCC	1 cut(s)	969
BanII	GRGCYC	2 cut(s)	51, 1229
BauI	CACGAG	1 cut(s)	1430
BbrPI	CACGTG	3 cut(s)	859, 1669, 1708
BbsI	GAAGAC	5 cut(s)	211, 571, 859, 890, 1386
BbvCI	CCTCAGC	3 cut(s)	119, 1067, 1844
BbvI	GCAGC	4 cut(s)	276, 674, 1722, 1908
BccI	CCATC	4 cut(s)	138, 176, 221, 335
BcgI	CGANNNNNNTGC	4 cut(s)	716, 750, 1411, 1445
BciT130I	CCWGG	3 cut(s)	538, 1028, 1913
BcoDI	GTCTC	3 cut(s)	779, 1231, 1560
BglI	GCCNNNNNGGC	2 cut(s)	379, 1888
BlpI	GCTNAGC	1 cut(s)	1770
Bme18I	GGWCC	5 cut(s)	642, 1291, 1449, 1909, 1931
BmeRI	GACNNNNNGTC	2 cut(s)	891, 1423
BmeT110I	CYCGRG	5 cut(s)	302, 461, 756, 965, 1648
BmgBI	CACGTC	4 cut(s)	1243, 1684, 1857, 1887
BmgT120I	GGNCC	9 cut(s)	633, 642, 693, 1262, 1291, 1449, 1526, 1909, 1931
BmiI	GGNNCC	8 cut(s)	48, 308, 971, 1032, 1226, 1527, 1664, 1932
BmsI	GCATC	2 cut(s)	897, 1600
BpiI	GAAGAC	5 cut(s)	211, 571, 859, 890, 1386
BplI	GAGNNNNNCTC	4 cut(s)	1554, 1586, 1938, 1970
BpmI	CTGGAG	3 cut(s)	1049, 1243, 1965
Bpu10I	CCTNAGC	3 cut(s)	119, 1067, 1844
Bpu1102I	GCTNAGC	1 cut(s)	1770
Bpu14I	TTCGAA	2 cut(s)	726, 1586
BpuEI	CTTGAG	1 cut(s)	1940
BsaAI	YACGTR	4 cut(s)	859, 1669, 1708, 1819
BsaHI	GRCGYC	4 cut(s)	1104, 1149, 1347, 1479
BsaI	GGTCTC	2 cut(s)	779, 1560
BsaWI	WCCGGW	2 cut(s)	895, 1442
Bsc4I	CCNNNNNNNGG	6 cut(s)	92, 303, 542, 859, 1033, 1672
Bse118I	RCCGGY	6 cut(s)	378, 1033, 1145, 1451, 1590, 1774
Bse1I	ACTGG	2 cut(s)	1273, 1792
BseBI	CCWGG	3 cut(s)	538, 1028, 1913
BseGI	GGATG	1 cut(s)	1253
BseLI	CCNNNNNNNGG	6 cut(s)	92, 303, 542, 859, 1033, 1672
BseMII	CTCAG	6 cut(s)	133, 372, 1010, 1058, 1761, 1835
BseNI	ACTGG	2 cut(s)	1273, 1792
BseRI	GAGGAG	3 cut(s)	115, 1578, 1861
BseSI	GKGCMC	1 cut(s)	59
BseX3I	CGGCCG	1 cut(s)	792
BseXI	GCAGC	4 cut(s)	276, 674, 1722, 1908
BseYI	CCCAGC	1 cut(s)	690
Bsh1236I	CGCG	7 cut(s)	624, 840, 984, 1118, 1301, 1303, 1377
Bsh1285I	CGRYCG	4 cut(s)	322, 379, 795, 1447
BshFI	GGCC	8 cut(s)	81, 634, 695, 794, 1208, 1263, 1455, 1528
BshNI	GGYRCC	1 cut(s)	969
BsiEI	CGRYCG	4 cut(s)	322, 379, 795, 1447
BsiHKCI	CYCGRG	5 cut(s)	302, 461, 756, 965, 1648
BsiWI	CGTACG	2 cut(s)	522, 1803
BslFI	GGGAC	3 cut(s)	519, 554, 1334
BslI	CCNNNNNNNGG	6 cut(s)	92, 303, 542, 859, 1033, 1672
BsmAI	GTCTC	3 cut(s)	779, 1231, 1560
BsmFI	GGGAC	3 cut(s)	519, 554, 1334
BsmI	GAATGC	1 cut(s)	292
BsnI	GGCC	8 cut(s)	81, 634, 695, 794, 1208, 1263, 1455, 1528
Bso31I	GGTCTC	2 cut(s)	779, 1560
BsoBI	CYCGRG	5 cut(s)	302, 461, 756, 965, 1648
Bsp119I	TTCGAA	2 cut(s)	726, 1586
Bsp1286I	GDGCHC	3 cut(s)	51, 59, 1229
Bsp143I	GATC	8 cut(s)	1014, 1108, 1296, 1324, 1365, 1439, 1662, 1698
Bsp1720I	GCTNAGC	1 cut(s)	1770
Bsp68I	TCGCGA	1 cut(s)	1377
BspANI	GGCC	8 cut(s)	81, 634, 695, 794, 1208, 1263, 1455, 1528
BspCNI	CTCAG	6 cut(s)	132, 371, 1009, 1059, 1762, 1836
BspFNI	CGCG	7 cut(s)	624, 840, 984, 1118, 1301, 1303, 1377
BspLI	GGNNCC	8 cut(s)	48, 308, 971, 1032, 1226, 1527, 1664, 1932
BspPI	GGATC	5 cut(s)	1360, 1434, 1657, 1670, 1706
BspT104I	TTCGAA	2 cut(s)	726, 1586
BspT107I	GGYRCC	1 cut(s)	969
BspTNI	GGTCTC	2 cut(s)	779, 1560
BsrFI	RCCGGY	6 cut(s)	378, 1033, 1145, 1451, 1590, 1774
BsrI	ACTGG	2 cut(s)	1273, 1792
BssAI	RCCGGY	6 cut(s)	378, 1033, 1145, 1451, 1590, 1774
BssMI	GATC	8 cut(s)	1014, 1108, 1296, 1324, 1365, 1439, 1662, 1698
BssNI	GRCGYC	4 cut(s)	1104, 1149, 1347, 1479
BssSI	CACGAG	1 cut(s)	1430
BssT1I	CCWWGG	2 cut(s)	51, 1135
Bst2BI	CACGAG	1 cut(s)	1430
Bst2UI	CCWGG	3 cut(s)	538, 1028, 1913
Bst4CI	ACNGT	4 cut(s)	76, 479, 1291, 1334
Bst6I	CTCTTC	2 cut(s)	317, 1588
BstACI	GRCGYC	4 cut(s)	1104, 1149, 1347, 1479
BstBAI	YACGTR	4 cut(s)	859, 1669, 1708, 1819
BstBI	TTCGAA	2 cut(s)	726, 1586
BstC8I	GCNNGC	3 cut(s)	246, 344, 1880
BstDEI	CTNAG	6 cut(s)	119, 358, 996, 1067, 1770, 1844
BstDSI	CCRYGG	1 cut(s)	982
BstEII	GGTNACC	1 cut(s)	898
BstF5I	GGATG	1 cut(s)	1253
BstFNI	CGCG	7 cut(s)	624, 840, 984, 1118, 1301, 1303, 1377
BstHHI	GCGC	2 cut(s)	624, 1303
BstKTI	GATC	8 cut(s)	1017, 1111, 1299, 1327, 1368, 1442, 1665, 1701
BstMAI	GTCTC	3 cut(s)	779, 1231, 1560
BstMBI	GATC	8 cut(s)	1014, 1108, 1296, 1324, 1365, 1439, 1662, 1698
BstMCI	CGRYCG	4 cut(s)	322, 379, 795, 1447
BstMWI	GCNNNNNNNGC	6 cut(s)	379, 601, 1600, 1719, 1849, 1888
BstNI	CCWGG	3 cut(s)	538, 1028, 1913
BstPI	GGTNACC	1 cut(s)	898
BstSLI	GKGCMC	1 cut(s)	59
BstUI	CGCG	7 cut(s)	624, 840, 984, 1118, 1301, 1303, 1377
BstV1I	GCAGC	4 cut(s)	276, 674, 1722, 1908
BstV2I	GAAGAC	5 cut(s)	211, 571, 859, 890, 1386
BstX2I	RGATCY	2 cut(s)	1365, 1662
BstYI	RGATCY	2 cut(s)	1365, 1662
BstZI	CGGCCG	1 cut(s)	792
BsuRI	GGCC	8 cut(s)	81, 634, 695, 794, 1208, 1263, 1455, 1528
BtgI	CCRYGG	1 cut(s)	982
BtgZI	GCGATG	1 cut(s)	1558
BtrI	CACGTC	4 cut(s)	1243, 1684, 1857, 1887
BtsCI	GGATG	1 cut(s)	1253
BtsI	GCAGTG	1 cut(s)	778
BtsIMutI	CAGTG	3 cut(s)	411, 778, 1004
BtuMI	TCGCGA	1 cut(s)	1377
Cac8I	GCNNGC	3 cut(s)	246, 344, 1880
CfoI	GCGC	2 cut(s)	624, 1303
Cfr10I	RCCGGY	6 cut(s)	378, 1033, 1145, 1451, 1590, 1774
Cfr13I	GGNCC	9 cut(s)	633, 642, 693, 1262, 1291, 1449, 1526, 1909, 1931
Cfr42I	CCGCGG	1 cut(s)	985
Cfr9I	CCCGGG	3 cut(s)	302, 461, 756
CpoI	CGGWCCG	1 cut(s)	1449
CseI	GACGC	3 cut(s)	1112, 1138, 1487
Csp6I	GTAC	7 cut(s)	17, 523, 970, 1285, 1804, 1816, 1867
CspCI	CAANNNNNGTGG	2 cut(s)	400, 435
CspI	CGGWCCG	1 cut(s)	1449
CviAII	CATG	3 cut(s)	799, 1353, 1543
CviQI	GTAC	7 cut(s)	17, 523, 970, 1285, 1804, 1816, 1867
DdeI	CTNAG	6 cut(s)	119, 358, 996, 1067, 1770, 1844
DpnI	GATC	8 cut(s)	1016, 1110, 1298, 1326, 1367, 1441, 1664, 1700
DpnII	GATC	8 cut(s)	1014, 1108, 1296, 1324, 1365, 1439, 1662, 1698
DrdI	GACNNNNNNGTC	1 cut(s)	575
DriI	GACNNNNNGTC	2 cut(s)	891, 1423
DseDI	GACNNNNNNGTC	1 cut(s)	575
EaeI	YGGCCR	3 cut(s)	79, 792, 1453
EagI	CGGCCG	1 cut(s)	792
Eam1104I	CTCTTC	2 cut(s)	317, 1588
Eam1105I	GACNNNNNGTC	2 cut(s)	891, 1423
EarI	CTCTTC	2 cut(s)	317, 1588
EciI	GGCGGA	3 cut(s)	104, 447, 1518
EclXI	CGGCCG	1 cut(s)	792
Eco130I	CCWWGG	2 cut(s)	51, 1135
Eco24I	GRGCYC	2 cut(s)	51, 1229
Eco31I	GGTCTC	2 cut(s)	779, 1560
Eco47I	GGWCC	5 cut(s)	642, 1291, 1449, 1909, 1931
Eco52I	CGGCCG	1 cut(s)	792
Eco72I	CACGTG	3 cut(s)	859, 1669, 1708
Eco88I	CYCGRG	5 cut(s)	302, 461, 756, 965, 1648
Eco91I	GGTNACC	1 cut(s)	898
EcoO109I	RGGNCCY	1 cut(s)	1931
EcoO65I	GGTNACC	1 cut(s)	898
EcoRII	CCWGG	3 cut(s)	536, 1026, 1911
EcoT14I	CCWWGG	2 cut(s)	51, 1135
EcoT38I	GRGCYC	2 cut(s)	51, 1229
ErhI	CCWWGG	2 cut(s)	51, 1135
FaeI	CATG	3 cut(s)	802, 1356, 1546
FaiI	YATR	8 cut(s)	23, 739, 800, 1247, 1249, 1259, 1354, 1544
FalI	AAGNNNNNCTT	2 cut(s)	335, 367
FaqI	GGGAC	3 cut(s)	519, 554, 1334
FatI	CATG	3 cut(s)	798, 1352, 1542
FauI	CCCGC	3 cut(s)	253, 620, 1666
FblI	GTMKAC	3 cut(s)	876, 992, 1476
FokI	GGATG	1 cut(s)	1240
FriOI	GRGCYC	2 cut(s)	51, 1229
GlaI	GCGC	2 cut(s)	623, 1302
GsaI	CCCAGC	1 cut(s)	694
GsuI	CTGGAG	3 cut(s)	1049, 1243, 1965
HaeIII	GGCC	8 cut(s)	81, 634, 695, 794, 1208, 1263, 1455, 1528
HgaI	GACGC	3 cut(s)	1112, 1138, 1487
HhaI	GCGC	2 cut(s)	624, 1303
Hin1I	GRCGYC	4 cut(s)	1104, 1149, 1347, 1479
Hin1II	CATG	3 cut(s)	802, 1356, 1546
Hin6I	GCGC	2 cut(s)	622, 1301
HinP1I	GCGC	2 cut(s)	622, 1301
HincII	GTYRAC	6 cut(s)	747, 877, 993, 1477, 1486, 1518
HindII	GTYRAC	6 cut(s)	747, 877, 993, 1477, 1486, 1518
HpaI	GTTAAC	1 cut(s)	1486
HphI	GGTGA	8 cut(s)	145, 545, 659, 892, 1016, 1346, 1834, 1910
Hpy166II	GTNNAC	9 cut(s)	747, 877, 993, 1287, 1477, 1486, 1518, 1687, 1743
Hpy188III	TCNNGA	8 cut(s)	334, 365, 388, 1087, 1100, 1127, 1294, 1376
Hpy8I	GTNNAC	9 cut(s)	747, 877, 993, 1287, 1477, 1486, 1518, 1687, 1743
HpyAV	CCTTC	5 cut(s)	1102, 1219, 1408, 1588, 1944
HpyCH4III	ACNGT	4 cut(s)	76, 479, 1291, 1334
HpyCH4V	TGCA	4 cut(s)	292, 737, 802, 1356
HpyF10VI	GCNNNNNNNGC	6 cut(s)	379, 601, 1600, 1719, 1849, 1888
HpyF3I	CTNAG	6 cut(s)	119, 358, 996, 1067, 1770, 1844
Hsp92I	GRCGYC	4 cut(s)	1104, 1149, 1347, 1479
Hsp92II	CATG	3 cut(s)	802, 1356, 1546
HspAI	GCGC	2 cut(s)	622, 1301
KpnI	GGTACC	1 cut(s)	973
KspAI	GTTAAC	1 cut(s)	1486
KspI	CCGCGG	1 cut(s)	985
Kzo9I	GATC	8 cut(s)	1014, 1108, 1296, 1324, 1365, 1439, 1662, 1698
LmnI	GCTCC	6 cut(s)	46, 128, 306, 1030, 1224, 1415
Lsp1109I	GCAGC	4 cut(s)	276, 674, 1722, 1908
LweI	GCATC	2 cut(s)	897, 1600
MaeIII	GTNAC	5 cut(s)	760, 898, 1048, 1653, 1762
MalI	GATC	8 cut(s)	1016, 1110, 1298, 1326, 1367, 1441, 1664, 1700
MboI	GATC	8 cut(s)	1014, 1108, 1296, 1324, 1365, 1439, 1662, 1698
MflI	RGATCY	2 cut(s)	1365, 1662
MhlI	GDGCHC	3 cut(s)	51, 59, 1229
MluCI	AATT	3 cut(s)	185, 705, 1964
MlyI	GAGTC	7 cut(s)	448, 644, 742, 947, 988, 998, 1019
MmeI	TCCRAC	4 cut(s)	877, 1163, 1191, 1427
MroXI	GAANNNNTTC	1 cut(s)	887
MseI	TTAA	6 cut(s)	257, 1122, 1190, 1362, 1485, 1497
MslI	CAYNNNNRTG	3 cut(s)	905, 1608, 1896
MspA1I	CMGCKG	1 cut(s)	984
Mva1269I	GAATGC	1 cut(s)	292
MvaI	CCWGG	3 cut(s)	538, 1028, 1913
MvnI	CGCG	7 cut(s)	624, 840, 984, 1118, 1301, 1303, 1377
MwoI	GCNNNNNNNGC	6 cut(s)	379, 601, 1600, 1719, 1849, 1888
NdeII	GATC	8 cut(s)	1014, 1108, 1296, 1324, 1365, 1439, 1662, 1698
NlaIII	CATG	3 cut(s)	802, 1356, 1546
NlaIV	GGNNCC	8 cut(s)	48, 308, 971, 1032, 1226, 1527, 1664, 1932
NmeAIII	GCCGAG	1 cut(s)	1572
NmuCI	GTSAC	4 cut(s)	760, 898, 1048, 1762
NruI	TCGCGA	1 cut(s)	1377
NspV	TTCGAA	2 cut(s)	726, 1586
OliI	CACNNNNGTG	1 cut(s)	1896
PasI	CCCWGGG	1 cut(s)	537
PcsI	WCGNNNNNNNCGW	5 cut(s)	372, 1110, 1164, 1305, 1526
PctI	GAATGC	1 cut(s)	292
PdmI	GAANNNNTTC	1 cut(s)	887
PfeI	GAWTC	6 cut(s)	270, 728, 816, 978, 1305, 1506
Pfl23II	CGTACG	2 cut(s)	522, 1803
PflFI	GACNNNGTC	2 cut(s)	572, 653
PleI	GAGTC	7 cut(s)	448, 644, 742, 947, 988, 997, 1018
PmaCI	CACGTG	3 cut(s)	859, 1669, 1708
PmlI	CACGTG	3 cut(s)	859, 1669, 1708
PpsI	GAGTC	7 cut(s)	448, 644, 742, 947, 988, 997, 1018
Ppu21I	YACGTR	4 cut(s)	859, 1669, 1708, 1819
PpuMI	RGGWCCY	1 cut(s)	1931
Psp1406I	AACGTT	1 cut(s)	1359
Psp5II	RGGWCCY	1 cut(s)	1931
Psp6I	CCWGG	3 cut(s)	536, 1026, 1911
PspCI	CACGTG	3 cut(s)	859, 1669, 1708
PspEI	GGTNACC	1 cut(s)	898
PspFI	CCCAGC	1 cut(s)	690
PspGI	CCWGG	3 cut(s)	536, 1026, 1911
PspLI	CGTACG	2 cut(s)	522, 1803
PspN4I	GGNNCC	8 cut(s)	48, 308, 971, 1032, 1226, 1527, 1664, 1932
PspPI	GGNCC	9 cut(s)	633, 642, 693, 1262, 1291, 1449, 1526, 1909, 1931
PspPPI	RGGWCCY	1 cut(s)	1931
PsuI	RGATCY	2 cut(s)	1365, 1662
PsyI	GACNNNGTC	2 cut(s)	572, 653
RruI	TCGCGA	1 cut(s)	1377
RsaI	GTAC	7 cut(s)	18, 524, 971, 1286, 1805, 1817, 1868
RsaNI	GTAC	7 cut(s)	17, 523, 970, 1285, 1804, 1816, 1867
RseI	CAYNNNNRTG	3 cut(s)	905, 1608, 1896
Rsr2I	CGGWCCG	1 cut(s)	1449
RsrII	CGGWCCG	1 cut(s)	1449
SacII	CCGCGG	1 cut(s)	985
SalI	GTCGAC	3 cut(s)	875, 991, 1475
SaqAI	TTAA	6 cut(s)	257, 1122, 1190, 1362, 1485, 1497
Sau3AI	GATC	8 cut(s)	1014, 1108, 1296, 1324, 1365, 1439, 1662, 1698
Sau96I	GGNCC	9 cut(s)	633, 642, 693, 1262, 1291, 1449, 1526, 1909, 1931
SchI	GAGTC	7 cut(s)	448, 644, 742, 947, 988, 998, 1019
SduI	GDGCHC	3 cut(s)	51, 59, 1229
SfaNI	GCATC	2 cut(s)	897, 1600
Sfr303I	CCGCGG	1 cut(s)	985
SfuI	TTCGAA	2 cut(s)	726, 1586
SgrAI	CRCCGGYG	1 cut(s)	1145
SgrBI	CCGCGG	1 cut(s)	985
SinI	GGWCC	5 cut(s)	642, 1291, 1449, 1909, 1931
SmaI	CCCGGG	3 cut(s)	304, 463, 758
SmiMI	CAYNNNNRTG	3 cut(s)	905, 1608, 1896
SmlI	CTYRAG	1 cut(s)	1955
SmoI	CTYRAG	1 cut(s)	1955
Sse9I	AATT	3 cut(s)	185, 705, 1964
StyI	CCWWGG	2 cut(s)	51, 1135
TaaI	ACNGT	4 cut(s)	76, 479, 1291, 1334
TaqII	GACCGA	1 cut(s)	336
TasI	AATT	3 cut(s)	185, 705, 1964
TatI	WGTACW	1 cut(s)	1284
TauI	GCSGC	7 cut(s)	627, 797, 837, 840, 987, 1008, 1921
TfiI	GAWTC	6 cut(s)	270, 728, 816, 978, 1305, 1506
Tru1I	TTAA	6 cut(s)	257, 1122, 1190, 1362, 1485, 1497
Tru9I	TTAA	6 cut(s)	257, 1122, 1190, 1362, 1485, 1497
TscAI	CASTG	3 cut(s)	418, 785, 1004
TseFI	GTSAC	4 cut(s)	760, 898, 1048, 1762
TseI	GCWGC	4 cut(s)	289, 687, 1735, 1921
Tsp45I	GTSAC	4 cut(s)	760, 898, 1048, 1762
TspDTI	ATGAA	2 cut(s)	211, 343
TspGWI	ACGGA	8 cut(s)	286, 643, 756, 822, 881, 1499, 1535, 1672
TspMI	CCCGGG	3 cut(s)	302, 461, 756
TspRI	CASTG	3 cut(s)	418, 785, 1004
Tth111I	GACNNNGTC	2 cut(s)	572, 653
VpaK11BI	GGWCC	5 cut(s)	642, 1291, 1449, 1909, 1931
XmaI	CCCGGG	3 cut(s)	302, 461, 756
XmiI	GTMKAC	3 cut(s)	876, 992, 1476
XmnI	GAANNNNTTC	1 cut(s)	887
ZraI	GACGTC	1 cut(s)	1348

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.