Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr3B

Orthogroup ID

OG0002386

Physical Location & Seq

Genomic Coordinates Reverse (-)

31465360 .. 31467870

Gene Structure 2511 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh3BG310200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1962 bp

ATGGAGCCCAAGGGCACTCTCATCTTCTCCACCATTGGCCGACCCCACTACGGCTTCGACCTATTCTCCCTCCGCCTCAACTCCTCCCATCCCCTCCTCGAACACCGCCTCACCGACGGCAAATCCATCAACTTCAACGCCCAATTCGCCCACGACGACCACCACCAATCCATCGTCTTCATCTCCGAGCGAACCGGGTCGCCCGCCATTTACTTAACCCGACCCGGAGTCCCCAACCCCCAACTGCTGCATTCCGTGCCCGGAAGCCTCTTCCACGACCGACCCATCATCAAGAACGGCAAGCTCTACTTCATCTCAGCCCACGAACAGCCCGACCGGCTTTTCAATTTCAAGAGCTGGTCTGCTCTCTACTCCACTGAGCTTGATGATGAGAACGAAAGGAAAACCACCCGACTGACTCCGCCCGGGTCTGTCGATTACAGTCCGGCCGTTTCTCTCTCCGGCGAGTTCGTCGCCGTCGCTTCGTACGGCTCTCGTCCCTGGGACGGCGAGTTGCACCAGCTCAACACCGACATCGTCGTCTTCCGAGCCTCACAGCCCGGAGAGCGTGTGGTGGTCTGTGAGCGCGGCGGGTGGCCCACCTGGTCCGGCGACTCCTTCATCTACTTTCACCGCCAGGACGACGACGGATGGTGGACCATTTTCCGAATTGACTTCCCCCAAGATTTCGAATCCTCTGCATACCCGTTGACTCCCACTCGGGTCACTCCGTCGGGTCTCCACTGCTTCACTCCGGCCGCCATGCACGACGGAAAACGAATCGCCGTCGCCACTCGCCGCCGCGACACGAAGTTCCGACACGTGGAGGTCTTCGACGTCGACACGAAGACGTTCCGTCCGGTCACCTCGACGCTGAACCCGGATTTCCACCATTACAACCCGTTCGTTTCCCCGGACTCCGAGTTCCTCGGGTACCACCGATTCCGCGGCGAGTCGACTCAGTGGGGCGGCGAGTCGATCATTCCTCACCTGGAGCCGGTGTCGTCTCCCGTCACACATCTCCAAATGCTGAGGCTTAACGGCTTCTTCCCGACCTTCTCTCCCGACGCCGATCTCGTCGCGTTTAATCCCGATTTCCAAGGAAACCCCGGCGTCAAAATCGTCAGGTCCGACGGGTCAAAGTGTTGGACTTTAATCAATGGCCGCACGGCCTTCTACAACTGCTGGAGCCCCACAGAGAGACACGTCATATACACATCCATAGGCGGAATCTTCCAGTCAGCAAAGACAACGGTCCAGATTGCGCGAATAGAGTTTGACCCGTCTGATCTGAACGGTGATAAGGACGTCCCATGCAACGTTAAGATCCTCACTCGCGAAGACACAGGGAATAACGCCTTCGCTTCCTGCTCCCCAGACGGCAAGTCGCTCGTGTTCCGGTCCGGTCGGACCGGCCACAAGAACCTCTACATTGTCGACGCCGTTAACGGCGAGTTTAACGGCGGAATCCGTCGGTTGACGGAGGGGCCGTGTATTGATACCATGCCGAGCTGGTCGCCCAGAGGAGACCTCATCGCCTTCTCTTCGAACCGGCACAAACCGGACGATGATGCTGTGTTCAGCATTTACGTCATCAACCCGGACGGCTCGGGGTTGCGGAGGATCCACGTGGCGGGGGATGACGTGGACAGGGAGAGGATCAACCACGTGTGCTTTAGTAACGACGGGGAGTGGCTGCTGTTCACGGCTAACTTGGACGGCGTGACGGCTGAGCCGGTGTCGTTTCCGAACCAGTTTCAGCCGTACGGGGATTTGTACGTGGTGAGATTGGACGGGAGTGGGTTGAGGAGGCTGACGTGGAATGGGTACGAGAATGGCACGCCGACGTGGCACACGGGTGATGAGCTGGACTTGGGGCGGCTGCGTTTGGGTCCTTCCGAAGCTGGAGATAAACTCAAGGGTCAATTTGACGAACCTCTTTGGATTTCTTGTGACATCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DPPIV_N PD40

Protein Analysis

653

Amino Acids

73.36

Weight (kDa)

5.81

Isoelectric Point (pI)

36.85

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Tricorn_N	PF26549	448 - 542	5.2e-10	Tricorn protease N-terminal beta propeller domain
PD40	PF07676	491 - 531	7.1e-06	WD40-like Beta Propeller Repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002386)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G01870 AT4G01870
fragaria_vesca	FvH4_1g26490
malus_domestica	MD17G1281200.v1.1
prunus_persica	Prupe.3G004400_v2.0.a1
pyrus_communis	pycom09g02860 pycom10g10260 pycom17g27890
rosa_chinensis	RchiOBHm_Chr2g0147951 RchiOBHm_Chr3g0485261 RchiOBHm_Chr3g0486551 RchiOBHm_Chr6g0276991 RchiOBHm_Chr6g0277001
rosa_laevigata	RLG00000023077 RLG00000024900 RLG00000033827
rosa_multiflora	Rmu_sc0000308.1_g000067 Rmu_sc0001260.1_g000030 Rmu_sc0003040.1_g000011 Rmu_sc0003801.1_g000028 Rmu_sc0003801.1_g000029 Rmu_sc0008973.1_g000015 Rmu_sc0011408.1_g000002 Rmu_sc0011408.1_g000004 Rmu_sc0011943.1_g000001 Rmu_sc0032328.1_g000001 Rmu_sc0040736.1_g000001
rosa_roxburghii	Rroxscaffold_2G00138000 Rroxscaffold_4G00302670 Rroxscaffold_5G00344080 Rroxscaffold_5G00373530 Rroxscaffold_6G00395800
rosa_rugosa	Rorug03G0225100
rosa_samantha	Rh3AG275100 Rh3BG310200 Rh3CG309400 Rh3DG306200 Rh4BG238600 Rh6BG152100 Rh6CG318000 Rh6DG302900
rosa_wichuraiana	Rw3G024520

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	539
AatII	GACGTC	2 cut(s)	840, 1311
Acc65I	GGTACC	1 cut(s)	933
AccB1I	GGYRCC	1 cut(s)	933
AccI	GTMKAC	3 cut(s)	840, 956, 1437
AccII	CGCG	6 cut(s)	588, 804, 948, 1082, 1267, 1338
AclI	AACGTT	1 cut(s)	1320
AclWI	GGATC	4 cut(s)	1321, 1618, 1631, 1667
AcoI	YGGCCR	5 cut(s)	37, 447, 756, 1162, 1414
AcvI	CACGTG	3 cut(s)	823, 1630, 1669
AcyI	GRCGYC	5 cut(s)	837, 1068, 1113, 1308, 1440
AfaI	GTAC	5 cut(s)	488, 935, 1766, 1778, 1829
AfiI	CCNNNNNNNGG	5 cut(s)	50, 506, 823, 997, 1633
AflIII	ACRYGT	3 cut(s)	820, 1204, 1668
AgsI	TTSAA	3 cut(s)	136, 346, 352
AhdI	GACNNNNNGTC	3 cut(s)	227, 855, 1384
AjiI	CACGTC	4 cut(s)	1207, 1645, 1818, 1848
AjnI	CCWGG	4 cut(s)	500, 602, 636, 990
AleI	CACNNNNGTG	1 cut(s)	1857
AloI	GAACNNNNNNTCC	2 cut(s)	908, 940
AluBI	AGCT	7 cut(s)	304, 357, 382, 523, 1512, 1867, 1904
AluI	AGCT	7 cut(s)	304, 357, 382, 523, 1512, 1867, 1904
Alw26I	GTCTC	4 cut(s)	743, 1011, 1195, 1521
AlwI	GGATC	4 cut(s)	1321, 1618, 1631, 1667
Ama87I	CYCGRG	4 cut(s)	425, 720, 929, 1609
AoxI	GGCC	8 cut(s)	37, 447, 596, 756, 1162, 1170, 1414, 1487
ApeKI	GCWGC	3 cut(s)	247, 1696, 1882
Asp700I	GAANNNNTTC	1 cut(s)	851
Asp718I	GGTACC	1 cut(s)	933
AspLEI	GCGC	2 cut(s)	588, 1267
AspS9I	GGNCC	9 cut(s)	597, 606, 657, 1128, 1255, 1401, 1410, 1487, 1892
AsuHPI	GGTGA	7 cut(s)	103, 623, 856, 980, 1310, 1795, 1871
AsuII	TTCGAA	2 cut(s)	690, 1547
AvaI	CYCGRG	4 cut(s)	425, 720, 929, 1609
AvaII	GGWCC	7 cut(s)	606, 657, 1128, 1255, 1401, 1410, 1892
BaeGI	GKGCMC	2 cut(s)	17, 261
BamHI	GGATCC	1 cut(s)	1623
BanI	GGYRCC	1 cut(s)	933
BanII	GRGCYC	2 cut(s)	9, 1193
BauI	CACGAG	1 cut(s)	1391
BbrPI	CACGTG	3 cut(s)	823, 1630, 1669
BbsI	GAAGAC	5 cut(s)	169, 535, 823, 854, 1347
BbvCI	CCTCAGC	1 cut(s)	1031
BbvI	GCAGC	3 cut(s)	234, 1683, 1869
BccI	CCATC	5 cut(s)	96, 134, 179, 293, 645
BcgI	CGANNNNNNTGC	4 cut(s)	680, 714, 1372, 1406
BciT130I	CCWGG	4 cut(s)	502, 604, 638, 992
BcoDI	GTCTC	4 cut(s)	743, 1011, 1195, 1521
BglI	GCCNNNNNGGC	2 cut(s)	337, 1849
BlpI	GCTNAGC	1 cut(s)	1731
Bme18I	GGWCC	7 cut(s)	606, 657, 1128, 1255, 1401, 1410, 1892
BmeRI	GACNNNNNGTC	3 cut(s)	227, 855, 1384
BmeT110I	CYCGRG	4 cut(s)	425, 720, 929, 1609
BmgBI	CACGTC	4 cut(s)	1207, 1645, 1818, 1848
BmgT120I	GGNCC	9 cut(s)	597, 606, 657, 1128, 1255, 1401, 1410, 1487, 1892
BmiI	GGNNCC	7 cut(s)	6, 935, 996, 1190, 1488, 1625, 1893
BmsI	GCATC	1 cut(s)	1561
BoxI	GACNNNNGTC	1 cut(s)	1253
BpiI	GAAGAC	5 cut(s)	169, 535, 823, 854, 1347
BplI	GAGNNNNNCTC	4 cut(s)	1515, 1547, 1899, 1931
BpmI	CTGGAG	3 cut(s)	1013, 1207, 1926
Bpu10I	CCTNAGC	1 cut(s)	1031
Bpu1102I	GCTNAGC	1 cut(s)	1731
Bpu14I	TTCGAA	2 cut(s)	690, 1547
BpuEI	CTTGAG	1 cut(s)	1901
BsaAI	YACGTR	4 cut(s)	823, 1630, 1669, 1780
BsaHI	GRCGYC	5 cut(s)	837, 1068, 1113, 1308, 1440
BsaI	GGTCTC	2 cut(s)	743, 1521
BsaJI	CCNNGG	9 cut(s)	9, 425, 500, 501, 912, 928, 946, 1099, 1108
BsaWI	WCCGGW	4 cut(s)	859, 1398, 1403, 1561
Bsc4I	CCNNNNNNNGG	5 cut(s)	50, 506, 823, 997, 1633
Bse118I	RCCGGY	5 cut(s)	336, 997, 1412, 1551, 1735
Bse1I	ACTGG	2 cut(s)	1237, 1753
BseBI	CCWGG	4 cut(s)	502, 604, 638, 992
BseDI	CCNNGG	9 cut(s)	9, 425, 500, 501, 912, 928, 946, 1099, 1108
BseGI	GGATG	4 cut(s)	88, 656, 1217, 1645
BseLI	CCNNNNNNNGG	5 cut(s)	50, 506, 823, 997, 1633
BseMII	CTCAG	5 cut(s)	330, 369, 974, 1022, 1722
BseNI	ACTGG	2 cut(s)	1237, 1753
BseRI	GAGGAG	4 cut(s)	73, 86, 1539, 1822
BseSI	GKGCMC	2 cut(s)	17, 261
BseX3I	CGGCCG	2 cut(s)	447, 756
BseXI	GCAGC	3 cut(s)	234, 1683, 1869
Bsh1236I	CGCG	6 cut(s)	588, 804, 948, 1082, 1267, 1338
Bsh1285I	CGRYCG	5 cut(s)	280, 337, 450, 759, 1408
BshFI	GGCC	8 cut(s)	39, 449, 598, 758, 1164, 1172, 1416, 1489
BshNI	GGYRCC	1 cut(s)	933
BsiEI	CGRYCG	5 cut(s)	280, 337, 450, 759, 1408
BsiHKCI	CYCGRG	4 cut(s)	425, 720, 929, 1609
BsiWI	CGTACG	2 cut(s)	486, 1764
BslFI	GGGAC	4 cut(s)	215, 483, 518, 1295
BslI	CCNNNNNNNGG	5 cut(s)	50, 506, 823, 997, 1633
BsmAI	GTCTC	4 cut(s)	743, 1011, 1195, 1521
BsmBI	CGTCTC	1 cut(s)	1011
BsmFI	GGGAC	4 cut(s)	215, 483, 518, 1295
BsmI	GAATGC	1 cut(s)	250
BsnI	GGCC	8 cut(s)	39, 449, 598, 758, 1164, 1172, 1416, 1489
Bso31I	GGTCTC	2 cut(s)	743, 1521
BsoBI	CYCGRG	4 cut(s)	425, 720, 929, 1609
Bsp119I	TTCGAA	2 cut(s)	690, 1547
Bsp1286I	GDGCHC	4 cut(s)	9, 17, 261, 1193
Bsp143I	GATC	6 cut(s)	978, 1072, 1288, 1326, 1623, 1659
Bsp1720I	GCTNAGC	1 cut(s)	1731
Bsp68I	TCGCGA	1 cut(s)	1338
BspANI	GGCC	8 cut(s)	39, 449, 598, 758, 1164, 1172, 1416, 1489
BspCNI	CTCAG	5 cut(s)	329, 370, 973, 1023, 1723
BspFNI	CGCG	6 cut(s)	588, 804, 948, 1082, 1267, 1338
BspLI	GGNNCC	7 cut(s)	6, 935, 996, 1190, 1488, 1625, 1893
BspPI	GGATC	4 cut(s)	1321, 1618, 1631, 1667
BspT104I	TTCGAA	2 cut(s)	690, 1547
BspT107I	GGYRCC	1 cut(s)	933
BspTNI	GGTCTC	2 cut(s)	743, 1521
BsrFI	RCCGGY	5 cut(s)	336, 997, 1412, 1551, 1735
BsrI	ACTGG	2 cut(s)	1237, 1753
BssAI	RCCGGY	5 cut(s)	336, 997, 1412, 1551, 1735
BssECI	CCNNGG	9 cut(s)	9, 425, 500, 501, 912, 928, 946, 1099, 1108
BssMI	GATC	6 cut(s)	978, 1072, 1288, 1326, 1623, 1659
BssNI	GRCGYC	5 cut(s)	837, 1068, 1113, 1308, 1440
BssSI	CACGAG	1 cut(s)	1391
BssT1I	CCWWGG	2 cut(s)	9, 1099
Bst2BI	CACGAG	1 cut(s)	1391
Bst2UI	CCWGG	4 cut(s)	502, 604, 638, 992
Bst4CI	ACNGT	3 cut(s)	443, 1255, 1298
Bst6I	CTCTTC	2 cut(s)	275, 1549
BstACI	GRCGYC	5 cut(s)	837, 1068, 1113, 1308, 1440
BstAPI	GCANNNNNTGC	1 cut(s)	256
BstBAI	YACGTR	4 cut(s)	823, 1630, 1669, 1780
BstBI	TTCGAA	2 cut(s)	690, 1547
BstC8I	GCNNGC	3 cut(s)	204, 302, 1841
BstDEI	CTNAG	5 cut(s)	316, 378, 960, 1031, 1731
BstDSI	CCRYGG	1 cut(s)	946
BstEII	GGTNACC	1 cut(s)	862
BstF5I	GGATG	4 cut(s)	88, 656, 1217, 1645
BstFNI	CGCG	6 cut(s)	588, 804, 948, 1082, 1267, 1338
BstHHI	GCGC	2 cut(s)	588, 1267
BstKTI	GATC	6 cut(s)	981, 1075, 1291, 1329, 1626, 1662
BstMAI	GTCTC	4 cut(s)	743, 1011, 1195, 1521
BstMBI	GATC	6 cut(s)	978, 1072, 1288, 1326, 1623, 1659
BstMCI	CGRYCG	5 cut(s)	280, 337, 450, 759, 1408
BstMWI	GCNNNNNNNGC	5 cut(s)	146, 256, 337, 565, 1849
BstNI	CCWGG	4 cut(s)	502, 604, 638, 992
BstPAI	GACNNNNGTC	1 cut(s)	1253
BstPI	GGTNACC	1 cut(s)	862
BstSLI	GKGCMC	2 cut(s)	17, 261
BstUI	CGCG	6 cut(s)	588, 804, 948, 1082, 1267, 1338
BstV1I	GCAGC	3 cut(s)	234, 1683, 1869
BstV2I	GAAGAC	5 cut(s)	169, 535, 823, 854, 1347
BstX2I	RGATCY	2 cut(s)	1326, 1623
BstYI	RGATCY	2 cut(s)	1326, 1623
BstZI	CGGCCG	2 cut(s)	447, 756
BsuRI	GGCC	8 cut(s)	39, 449, 598, 758, 1164, 1172, 1416, 1489
BtgI	CCRYGG	1 cut(s)	946
BtgZI	GCGATG	1 cut(s)	1519
BtrI	CACGTC	4 cut(s)	1207, 1645, 1818, 1848
BtsCI	GGATG	4 cut(s)	88, 656, 1217, 1645
BtsI	GCAGTG	1 cut(s)	742
BtsIMutI	CAGTG	3 cut(s)	375, 742, 968
BtuMI	TCGCGA	1 cut(s)	1338
Cac8I	GCNNGC	3 cut(s)	204, 302, 1841
CfoI	GCGC	2 cut(s)	588, 1267
Cfr10I	RCCGGY	5 cut(s)	336, 997, 1412, 1551, 1735
Cfr13I	GGNCC	9 cut(s)	597, 606, 657, 1128, 1255, 1401, 1410, 1487, 1892
Cfr42I	CCGCGG	1 cut(s)	949
Cfr9I	CCCGGG	1 cut(s)	425
CpoI	CGGWCCG	2 cut(s)	1401, 1410
CseI	GACGC	4 cut(s)	880, 1076, 1102, 1448
CsiI	ACCWGGT	1 cut(s)	602
Csp6I	GTAC	5 cut(s)	487, 934, 1765, 1777, 1828
CspCI	CAANNNNNGTGG	2 cut(s)	364, 399
CspI	CGGWCCG	2 cut(s)	1401, 1410
CviAII	CATG	3 cut(s)	763, 1314, 1504
CviQI	GTAC	5 cut(s)	487, 934, 1765, 1777, 1828
DdeI	CTNAG	5 cut(s)	316, 378, 960, 1031, 1731
DpnI	GATC	6 cut(s)	980, 1074, 1290, 1328, 1625, 1661
DpnII	GATC	6 cut(s)	978, 1072, 1288, 1326, 1623, 1659
DrdI	GACNNNNNNGTC	1 cut(s)	539
DriI	GACNNNNNGTC	3 cut(s)	227, 855, 1384
DseDI	GACNNNNNNGTC	1 cut(s)	539
EaeI	YGGCCR	5 cut(s)	37, 447, 756, 1162, 1414
EagI	CGGCCG	2 cut(s)	447, 756
Eam1104I	CTCTTC	2 cut(s)	275, 1549
Eam1105I	GACNNNNNGTC	3 cut(s)	227, 855, 1384
EarI	CTCTTC	2 cut(s)	275, 1549
EciI	GGCGGA	4 cut(s)	62, 411, 1242, 1479
EclXI	CGGCCG	2 cut(s)	447, 756
Eco130I	CCWWGG	2 cut(s)	9, 1099
Eco24I	GRGCYC	2 cut(s)	9, 1193
Eco31I	GGTCTC	2 cut(s)	743, 1521
Eco47I	GGWCC	7 cut(s)	606, 657, 1128, 1255, 1401, 1410, 1892
Eco52I	CGGCCG	2 cut(s)	447, 756
Eco72I	CACGTG	3 cut(s)	823, 1630, 1669
Eco88I	CYCGRG	4 cut(s)	425, 720, 929, 1609
Eco91I	GGTNACC	1 cut(s)	862
EcoO109I	RGGNCCY	1 cut(s)	1892
EcoO65I	GGTNACC	1 cut(s)	862
EcoRII	CCWGG	4 cut(s)	500, 602, 636, 990
EcoT14I	CCWWGG	2 cut(s)	9, 1099
EcoT38I	GRGCYC	2 cut(s)	9, 1193
ErhI	CCWWGG	2 cut(s)	9, 1099
Esp3I	CGTCTC	1 cut(s)	1011
FaeI	CATG	3 cut(s)	766, 1317, 1507
FaiI	YATR	7 cut(s)	703, 764, 1211, 1213, 1223, 1315, 1505
FalI	AAGNNNNNCTT	2 cut(s)	293, 325
FaqI	GGGAC	4 cut(s)	215, 483, 518, 1295
FatI	CATG	3 cut(s)	762, 1313, 1503
FauI	CCCGC	3 cut(s)	211, 584, 1627
FblI	GTMKAC	3 cut(s)	840, 956, 1437
FokI	GGATG	4 cut(s)	75, 663, 1204, 1652
FriOI	GRGCYC	2 cut(s)	9, 1193
GlaI	GCGC	2 cut(s)	587, 1266
GsuI	CTGGAG	3 cut(s)	1013, 1207, 1926
HaeIII	GGCC	8 cut(s)	39, 449, 598, 758, 1164, 1172, 1416, 1489
HgaI	GACGC	4 cut(s)	880, 1076, 1102, 1448
HhaI	GCGC	2 cut(s)	588, 1267
Hin1I	GRCGYC	5 cut(s)	837, 1068, 1113, 1308, 1440
Hin1II	CATG	3 cut(s)	766, 1317, 1507
Hin6I	GCGC	2 cut(s)	586, 1265
HinP1I	GCGC	2 cut(s)	586, 1265
HincII	GTYRAC	6 cut(s)	711, 841, 957, 1438, 1447, 1479
HindII	GTYRAC	6 cut(s)	711, 841, 957, 1438, 1447, 1479
HpaI	GTTAAC	1 cut(s)	1447
HphI	GGTGA	7 cut(s)	103, 623, 856, 980, 1310, 1795, 1871
Hpy166II	GTNNAC	9 cut(s)	657, 711, 841, 957, 1438, 1447, 1479, 1648, 1704
Hpy188III	TCNNGA	7 cut(s)	292, 352, 1051, 1064, 1091, 1258, 1337
Hpy8I	GTNNAC	9 cut(s)	657, 711, 841, 957, 1438, 1447, 1479, 1648, 1704
HpyAV	CCTTC	6 cut(s)	628, 1066, 1183, 1369, 1549, 1905
HpyCH4III	ACNGT	3 cut(s)	443, 1255, 1298
HpyCH4V	TGCA	5 cut(s)	250, 517, 701, 766, 1317
HpyF10VI	GCNNNNNNNGC	5 cut(s)	146, 256, 337, 565, 1849
HpyF3I	CTNAG	5 cut(s)	316, 378, 960, 1031, 1731
Hsp92I	GRCGYC	5 cut(s)	837, 1068, 1113, 1308, 1440
Hsp92II	CATG	3 cut(s)	766, 1317, 1507
HspAI	GCGC	2 cut(s)	586, 1265
KpnI	GGTACC	1 cut(s)	937
KspAI	GTTAAC	1 cut(s)	1447
KspI	CCGCGG	1 cut(s)	949
Kzo9I	GATC	6 cut(s)	978, 1072, 1288, 1326, 1623, 1659
LmnI	GCTCC	4 cut(s)	4, 994, 1188, 1376
Lsp1109I	GCAGC	3 cut(s)	234, 1683, 1869
LweI	GCATC	1 cut(s)	1561
MabI	ACCWGGT	1 cut(s)	602
MaeIII	GTNAC	6 cut(s)	724, 862, 1012, 1679, 1723, 1952
MalI	GATC	6 cut(s)	980, 1074, 1290, 1328, 1625, 1661
MboI	GATC	6 cut(s)	978, 1072, 1288, 1326, 1623, 1659
MflI	RGATCY	2 cut(s)	1326, 1623
MhlI	GDGCHC	4 cut(s)	9, 17, 261, 1193
MluCI	AATT	4 cut(s)	143, 346, 669, 1925
MlyI	GAGTC	8 cut(s)	237, 412, 608, 706, 911, 952, 962, 983
MmeI	TCCRAC	4 cut(s)	841, 1127, 1155, 1388
MroXI	GAANNNNTTC	1 cut(s)	851
MseI	TTAA	7 cut(s)	215, 1038, 1086, 1154, 1323, 1446, 1458
MslI	CAYNNNNRTG	1 cut(s)	1857
MspA1I	CMGCKG	1 cut(s)	948
Mva1269I	GAATGC	1 cut(s)	250
MvaI	CCWGG	4 cut(s)	502, 604, 638, 992
MvnI	CGCG	6 cut(s)	588, 804, 948, 1082, 1267, 1338
MwoI	GCNNNNNNNGC	5 cut(s)	146, 256, 337, 565, 1849
NdeII	GATC	6 cut(s)	978, 1072, 1288, 1326, 1623, 1659
NlaIII	CATG	3 cut(s)	766, 1317, 1507
NlaIV	GGNNCC	7 cut(s)	6, 935, 996, 1190, 1488, 1625, 1893
NmeAIII	GCCGAG	1 cut(s)	1533
NmuCI	GTSAC	5 cut(s)	724, 862, 1012, 1723, 1952
NruI	TCGCGA	1 cut(s)	1338
NspV	TTCGAA	2 cut(s)	690, 1547
OliI	CACNNNNGTG	1 cut(s)	1857
PasI	CCCWGGG	1 cut(s)	501
PcsI	WCGNNNNNNNCGW	5 cut(s)	153, 330, 1074, 1128, 1487
PctI	GAATGC	1 cut(s)	250
PdmI	GAANNNNTTC	1 cut(s)	851
PfeI	GAWTC	5 cut(s)	692, 780, 942, 1230, 1467
Pfl23II	CGTACG	2 cut(s)	486, 1764
PflFI	GACNNNGTC	1 cut(s)	536
PleI	GAGTC	8 cut(s)	236, 412, 608, 706, 911, 952, 961, 982
PmaCI	CACGTG	3 cut(s)	823, 1630, 1669
PmlI	CACGTG	3 cut(s)	823, 1630, 1669
PpsI	GAGTC	8 cut(s)	236, 412, 608, 706, 911, 952, 961, 982
Ppu21I	YACGTR	4 cut(s)	823, 1630, 1669, 1780
PpuMI	RGGWCCY	1 cut(s)	1892
PshAI	GACNNNNGTC	1 cut(s)	1253
Psp1406I	AACGTT	1 cut(s)	1320
Psp5II	RGGWCCY	1 cut(s)	1892
Psp6I	CCWGG	4 cut(s)	500, 602, 636, 990
PspCI	CACGTG	3 cut(s)	823, 1630, 1669
PspEI	GGTNACC	1 cut(s)	862
PspGI	CCWGG	4 cut(s)	500, 602, 636, 990
PspLI	CGTACG	2 cut(s)	486, 1764
PspN4I	GGNNCC	7 cut(s)	6, 935, 996, 1190, 1488, 1625, 1893
PspPI	GGNCC	9 cut(s)	597, 606, 657, 1128, 1255, 1401, 1410, 1487, 1892
PspPPI	RGGWCCY	1 cut(s)	1892
PsuI	RGATCY	2 cut(s)	1326, 1623
PsyI	GACNNNGTC	1 cut(s)	536
RruI	TCGCGA	1 cut(s)	1338
RsaI	GTAC	5 cut(s)	488, 935, 1766, 1778, 1829
RsaNI	GTAC	5 cut(s)	487, 934, 1765, 1777, 1828
RseI	CAYNNNNRTG	1 cut(s)	1857
Rsr2I	CGGWCCG	2 cut(s)	1401, 1410
RsrII	CGGWCCG	2 cut(s)	1401, 1410
SacII	CCGCGG	1 cut(s)	949
SalI	GTCGAC	3 cut(s)	839, 955, 1436
SaqAI	TTAA	7 cut(s)	215, 1038, 1086, 1154, 1323, 1446, 1458
Sau3AI	GATC	6 cut(s)	978, 1072, 1288, 1326, 1623, 1659
Sau96I	GGNCC	9 cut(s)	597, 606, 657, 1128, 1255, 1401, 1410, 1487, 1892
SchI	GAGTC	8 cut(s)	237, 412, 608, 706, 911, 952, 962, 983
SduI	GDGCHC	4 cut(s)	9, 17, 261, 1193
SexAI	ACCWGGT	1 cut(s)	602
SfaNI	GCATC	1 cut(s)	1561
Sfr303I	CCGCGG	1 cut(s)	949
SfuI	TTCGAA	2 cut(s)	690, 1547
SgrBI	CCGCGG	1 cut(s)	949
SinI	GGWCC	7 cut(s)	606, 657, 1128, 1255, 1401, 1410, 1892
SmaI	CCCGGG	1 cut(s)	427
SmiMI	CAYNNNNRTG	1 cut(s)	1857
SmlI	CTYRAG	1 cut(s)	1916
SmoI	CTYRAG	1 cut(s)	1916
Sse9I	AATT	4 cut(s)	143, 346, 669, 1925
StyI	CCWWGG	2 cut(s)	9, 1099
TaaI	ACNGT	3 cut(s)	443, 1255, 1298
TaqII	GACCGA	1 cut(s)	294
TasI	AATT	4 cut(s)	143, 346, 669, 1925
TauI	GCSGC	8 cut(s)	591, 761, 801, 804, 951, 972, 1167, 1882
TfiI	GAWTC	5 cut(s)	692, 780, 942, 1230, 1467
Tru1I	TTAA	7 cut(s)	215, 1038, 1086, 1154, 1323, 1446, 1458
Tru9I	TTAA	7 cut(s)	215, 1038, 1086, 1154, 1323, 1446, 1458
TscAI	CASTG	3 cut(s)	382, 749, 968
TseFI	GTSAC	5 cut(s)	724, 862, 1012, 1723, 1952
TseI	GCWGC	3 cut(s)	247, 1696, 1882
Tsp45I	GTSAC	5 cut(s)	724, 862, 1012, 1723, 1952
TspDTI	ATGAA	3 cut(s)	169, 301, 610
TspGWI	ACGGA	7 cut(s)	244, 663, 720, 786, 845, 1460, 1496
TspMI	CCCGGG	1 cut(s)	425
TspRI	CASTG	3 cut(s)	382, 749, 968
Tth111I	GACNNNGTC	1 cut(s)	536
VpaK11BI	GGWCC	7 cut(s)	606, 657, 1128, 1255, 1401, 1410, 1892
XmaI	CCCGGG	1 cut(s)	425
XmiI	GTMKAC	3 cut(s)	840, 956, 1437
XmnI	GAANNNNTTC	1 cut(s)	851
ZraI	GACGTC	2 cut(s)	838, 1309

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.