Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr3

Orthogroup ID

OG0002386

Physical Location & Seq

Genomic Coordinates Reverse (-)

31532366 .. 31534438

Gene Structure 2073 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw3G024520.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1950 bp

ATGGAGCCCAAGGGCACTCTCATCTTCTCCACCGTTGGCCGACCCCACTACGGCTTCGACCTATTCTCCCTCCGCCTCAGCTCCTCCCATCTCCCCCTCGAACACCGCCTCACCGACGGCAAATCCATCAACTTCAACGCCCAATTCGCCCACGACGACCACCACCAATCCATCGTCTTCATCTCCGAGCGAACCGGGTCGCCCGCCATTTACTTAACCCGACCCGGAATCCCCGACCCCCAACTGCTGCATTCCGTGCCCGGAAGCCTCTTCCACGACCGACCCATCATCAAGAACGGCAAGCTCTACTTCATCTCAGCTCACGAACAGCCCGACCGGCTTTTCAAGAGCTGGTCTGCTCTCTACTCCACTGAGCTTGATGGTGAGAACCAAAAGAAGACCACCCGGTTGACTCCGCCCGGGTCTGTCGATTACAGTCCGGCCGTTTCTCTCTCCGGCGAGTTCGTCGCCGTCGCTTCGTACGGCTCTCGTCCCTGGGACGGCGAGTTTCACCAGCTCAACACCGACATCGTCGTCTTCCGAGCCTCACAACCCGGAGAGCGTGTGGTGGTCTGTGAGCGCGGCGGGTGGCCCACCTGGTCTGGCGACTCCGTCATCTACTTTCACCGCCAAGACGACGACGGCTGGTGGGCCATTTTCCGAATTGATTTCCCCCAAGATTTCGAATCCTCTGCATACCCGTTGACTCCCACCCGGGTCACTCCGTCGGGTCTCCACTGCTTCACTCCGGCCGCCATGCACGACGGAAAACGAATCGCCCTCGCCACTCGCCGCCGCGACACGAAGTTCCGACACGTGGAGGTCTTCGACGTCGACACGAAGACGTTCCGTCCAGTCACCTCGATGCTGAACCCGGATTTCCACCACTACAACCCGTTTGTTTCCCCGGACTCCGAGTTCCTCGGGTACCACCGATTCCGCGGCGAGTCGACTCAGTGGGGCGGCGAGTCGATCATTCCTCACCTGGAGCCGGTGTCGTCTCCCGTCACACATCTCCAAATGCTGAGGCTTCACGGCTTCTTCCCGACCTTCTCTCCCGACGCCGATCTCGTCGCCTTTAATCCCGATTTCCAAGGAAACACCGGCGTCAAAATCGTCAAGTCCGACGGGTCAAAGTGTTGGACTTTAATCAAAGACCGCACGGCCTTCTACAACTGCTGGAGCCCCACAGAGAGACACGTCATATACACATCCATAGGCCCAATCTTCCAGTCACCAAAGTACACGGTCCAGATCGCGCGAATCGAGTTTGACCCGTCTGATCTGAACGGTGATAAGGAGGAAGTCCCATGCAACGTTAAGATCCTCACTCGCGAAGACACAGGGAATAACGCCTTCGCTTCCTGCTCCCCAGACGGCAAGTCGCTTGTGTTCCGATCCGGCCGGACCGGCCACAAGAACCTCTACATTGTCGACGCCGTTAACGGCGAGTTTAACGGCGGAATCCGTCGGTTGACGGAGGGGCCGTGTATTGATACCATGCCGAGCTGGTCGCCCAGAGGAGACCTCATCGCCTTCTCTTCGAACCGGCACAAACCGCACGATGATGCTGTGTTCAGCATTTACGTCATCAACCCGGACGGCTCGGGGTTACGGAGGATCCACGTGGCGGGAGATGACGTGGACAGGGAGAGGATCAACCACGTATGCTTTAGTAGCGACGGGGAGTGGCTTCTGTTCACGGCTAACTTGGACGGCGTGACGGCTGAGCCGGTGTCGTTTCCGAACCAGTTTCAGCCGTACGGGGATTTGTACGTGGTGAGATTGGACGGGAGTGGGCTGAGGAGGCTGACGTGGAATGGGTACGAGAATGGCACGCCGACGTGGCACACGGGTGATGAGCTGGACCTGGGGCGGCTGCGTTTGGGTCCTTCCGAAGCTGGAGATAAACTCAAGGGTCAATTTGACGAACCTCATTGGATTATCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DPPIV_N PD40

Protein Analysis

649

Amino Acids

73.04

Weight (kDa)

6.0

Isoelectric Point (pI)

36.29

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Tricorn_N	PF26549	447 - 541	3.8e-10	Tricorn protease N-terminal beta propeller domain
PD40	PF07676	490 - 530	9.8e-06	WD40-like Beta Propeller Repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002386)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G01870 AT4G01870
fragaria_vesca	FvH4_1g26490
malus_domestica	MD17G1281200.v1.1
prunus_persica	Prupe.3G004400_v2.0.a1
pyrus_communis	pycom09g02860 pycom10g10260 pycom17g27890
rosa_chinensis	RchiOBHm_Chr2g0147951 RchiOBHm_Chr3g0485261 RchiOBHm_Chr3g0486551 RchiOBHm_Chr6g0276991 RchiOBHm_Chr6g0277001
rosa_laevigata	RLG00000023077 RLG00000024900 RLG00000033827
rosa_multiflora	Rmu_sc0000308.1_g000067 Rmu_sc0001260.1_g000030 Rmu_sc0003040.1_g000011 Rmu_sc0003801.1_g000028 Rmu_sc0003801.1_g000029 Rmu_sc0008973.1_g000015 Rmu_sc0011408.1_g000002 Rmu_sc0011408.1_g000004 Rmu_sc0011943.1_g000001 Rmu_sc0032328.1_g000001 Rmu_sc0040736.1_g000001
rosa_roxburghii	Rroxscaffold_2G00138000 Rroxscaffold_4G00302670 Rroxscaffold_5G00344080 Rroxscaffold_5G00373530 Rroxscaffold_6G00395800
rosa_rugosa	Rorug03G0225100
rosa_samantha	Rh3AG275100 Rh3BG310200 Rh3CG309400 Rh3DG306200 Rh4BG238600 Rh6BG152100 Rh6CG318000 Rh6DG302900
rosa_wichuraiana	Rw3G024520

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	533
AatII	GACGTC	1 cut(s)	834
Acc65I	GGTACC	1 cut(s)	927
AccB1I	GGYRCC	1 cut(s)	927
AccI	GTMKAC	3 cut(s)	834, 950, 1434
AccII	CGCG	6 cut(s)	582, 798, 942, 1259, 1261, 1335
AclI	AACGTT	1 cut(s)	1317
AclWI	GGATC	5 cut(s)	1318, 1392, 1615, 1628, 1664
AcoI	YGGCCR	5 cut(s)	37, 441, 750, 1402, 1411
AcvI	CACGTG	2 cut(s)	817, 1627
AcyI	GRCGYC	4 cut(s)	831, 1062, 1107, 1437
AfaI	GTAC	6 cut(s)	482, 929, 1244, 1763, 1775, 1826
AfiI	CCNNNNNNNGG	5 cut(s)	50, 500, 817, 991, 1630
AflIII	ACRYGT	2 cut(s)	814, 1198
AgsI	TTSAA	2 cut(s)	136, 346
AhdI	GACNNNNNGTC	2 cut(s)	849, 1381
AjiI	CACGTC	4 cut(s)	1201, 1642, 1815, 1845
AjnI	CCWGG	4 cut(s)	494, 596, 984, 1869
AleI	CACNNNNGTG	1 cut(s)	1854
AloI	GAACNNNNNNTCC	2 cut(s)	902, 934
AluBI	AGCT	9 cut(s)	81, 304, 320, 351, 376, 517, 1509, 1864, 1901
AluI	AGCT	9 cut(s)	81, 304, 320, 351, 376, 517, 1509, 1864, 1901
Alw26I	GTCTC	4 cut(s)	737, 1005, 1189, 1518
AlwI	GGATC	5 cut(s)	1318, 1392, 1615, 1628, 1664
Ama87I	CYCGRG	4 cut(s)	419, 714, 923, 1606
ApeKI	GCWGC	2 cut(s)	247, 1879
Asp700I	GAANNNNTTC	1 cut(s)	845
Asp718I	GGTACC	1 cut(s)	927
AspLEI	GCGC	2 cut(s)	582, 1261
AspS9I	GGNCC	8 cut(s)	591, 651, 1220, 1249, 1407, 1484, 1867, 1889
AsuII	TTCGAA	2 cut(s)	684, 1544
AvaI	CYCGRG	4 cut(s)	419, 714, 923, 1606
AvaII	GGWCC	4 cut(s)	1249, 1407, 1867, 1889
BaeGI	GKGCMC	2 cut(s)	17, 261
BamHI	GGATCC	1 cut(s)	1620
BanI	GGYRCC	1 cut(s)	927
BanII	GRGCYC	2 cut(s)	9, 1187
BbrPI	CACGTG	2 cut(s)	817, 1627
BbsI	GAAGAC	6 cut(s)	169, 404, 529, 817, 848, 1344
BbvCI	CCTCAGC	3 cut(s)	77, 1025, 1802
BbvI	GCAGC	2 cut(s)	234, 1866
BccI	CCATC	5 cut(s)	96, 134, 179, 293, 374
BcgI	CGANNNNNNTGC	2 cut(s)	674, 708
BciT130I	CCWGG	4 cut(s)	496, 598, 986, 1871
BcoDI	GTCTC	4 cut(s)	737, 1005, 1189, 1518
BglI	GCCNNNNNGGC	3 cut(s)	337, 1410, 1846
BisI	GCNGC	9 cut(s)	248, 583, 753, 793, 796, 943, 964, 1877, 1880
BlpI	GCTNAGC	1 cut(s)	1728
BlsI	GCNGC	9 cut(s)	249, 584, 754, 794, 797, 944, 965, 1878, 1881
Bme18I	GGWCC	4 cut(s)	1249, 1407, 1867, 1889
BmeRI	GACNNNNNGTC	2 cut(s)	849, 1381
BmeT110I	CYCGRG	4 cut(s)	419, 714, 923, 1606
BmgBI	CACGTC	4 cut(s)	1201, 1642, 1815, 1845
BmgT120I	GGNCC	8 cut(s)	591, 651, 1220, 1249, 1407, 1484, 1867, 1889
BmiI	GGNNCC	7 cut(s)	6, 929, 990, 1184, 1485, 1622, 1890
BmsI	GCATC	2 cut(s)	855, 1558
BpiI	GAAGAC	6 cut(s)	169, 404, 529, 817, 848, 1344
BplI	GAGNNNNNCTC	4 cut(s)	1512, 1544, 1896, 1928
BpmI	CTGGAG	3 cut(s)	1007, 1201, 1923
Bpu10I	CCTNAGC	3 cut(s)	77, 1025, 1802
Bpu1102I	GCTNAGC	1 cut(s)	1728
Bpu14I	TTCGAA	2 cut(s)	684, 1544
BpuEI	CTTGAG	1 cut(s)	1898
BsaAI	YACGTR	4 cut(s)	817, 1627, 1666, 1777
BsaHI	GRCGYC	4 cut(s)	831, 1062, 1107, 1437
BsaI	GGTCTC	2 cut(s)	737, 1518
Bsc4I	CCNNNNNNNGG	5 cut(s)	50, 500, 817, 991, 1630
Bse118I	RCCGGY	6 cut(s)	336, 991, 1103, 1409, 1548, 1732
Bse1I	ACTGG	3 cut(s)	854, 1231, 1750
BseBI	CCWGG	4 cut(s)	496, 598, 986, 1871
BseGI	GGATG	1 cut(s)	1211
BseLI	CCNNNNNNNGG	5 cut(s)	50, 500, 817, 991, 1630
BseMII	CTCAG	7 cut(s)	91, 330, 363, 968, 1016, 1719, 1793
BseNI	ACTGG	3 cut(s)	854, 1231, 1750
BseRI	GAGGAG	3 cut(s)	73, 1536, 1819
BseSI	GKGCMC	2 cut(s)	17, 261
BseX3I	CGGCCG	3 cut(s)	441, 750, 1402
BseXI	GCAGC	2 cut(s)	234, 1866
Bsh1236I	CGCG	6 cut(s)	582, 798, 942, 1259, 1261, 1335
Bsh1285I	CGRYCG	5 cut(s)	280, 337, 444, 753, 1405
BshNI	GGYRCC	1 cut(s)	927
BsiEI	CGRYCG	5 cut(s)	280, 337, 444, 753, 1405
BsiHKCI	CYCGRG	4 cut(s)	419, 714, 923, 1606
BsiWI	CGTACG	2 cut(s)	480, 1761
BslFI	GGGAC	3 cut(s)	477, 512, 1292
BslI	CCNNNNNNNGG	5 cut(s)	50, 500, 817, 991, 1630
BsmAI	GTCTC	4 cut(s)	737, 1005, 1189, 1518
BsmBI	CGTCTC	1 cut(s)	1005
BsmFI	GGGAC	3 cut(s)	477, 512, 1292
BsmI	GAATGC	1 cut(s)	250
Bso31I	GGTCTC	2 cut(s)	737, 1518
BsoBI	CYCGRG	4 cut(s)	419, 714, 923, 1606
Bsp119I	TTCGAA	2 cut(s)	684, 1544
Bsp1286I	GDGCHC	4 cut(s)	9, 17, 261, 1187
Bsp143I	GATC	8 cut(s)	972, 1066, 1254, 1282, 1323, 1397, 1620, 1656
Bsp1720I	GCTNAGC	1 cut(s)	1728
Bsp68I	TCGCGA	1 cut(s)	1335
BspCNI	CTCAG	7 cut(s)	90, 329, 364, 967, 1017, 1720, 1794
BspFNI	CGCG	6 cut(s)	582, 798, 942, 1259, 1261, 1335
BspLI	GGNNCC	7 cut(s)	6, 929, 990, 1184, 1485, 1622, 1890
BspPI	GGATC	5 cut(s)	1318, 1392, 1615, 1628, 1664
BspT104I	TTCGAA	2 cut(s)	684, 1544
BspT107I	GGYRCC	1 cut(s)	927
BspTNI	GGTCTC	2 cut(s)	737, 1518
BsrFI	RCCGGY	6 cut(s)	336, 991, 1103, 1409, 1548, 1732
BsrI	ACTGG	3 cut(s)	854, 1231, 1750
BssAI	RCCGGY	6 cut(s)	336, 991, 1103, 1409, 1548, 1732
BssMI	GATC	8 cut(s)	972, 1066, 1254, 1282, 1323, 1397, 1620, 1656
BssNI	GRCGYC	4 cut(s)	831, 1062, 1107, 1437
BssT1I	CCWWGG	2 cut(s)	9, 1093
Bst2UI	CCWGG	4 cut(s)	496, 598, 986, 1871
Bst4CI	ACNGT	4 cut(s)	34, 437, 1249, 1292
Bst6I	CTCTTC	2 cut(s)	275, 1546
BstACI	GRCGYC	4 cut(s)	831, 1062, 1107, 1437
BstAPI	GCANNNNNTGC	1 cut(s)	256
BstBAI	YACGTR	4 cut(s)	817, 1627, 1666, 1777
BstBI	TTCGAA	2 cut(s)	684, 1544
BstC8I	GCNNGC	3 cut(s)	204, 302, 1838
BstDEI	CTNAG	7 cut(s)	77, 316, 372, 954, 1025, 1728, 1802
BstDSI	CCRYGG	1 cut(s)	940
BstF5I	GGATG	1 cut(s)	1211
BstFNI	CGCG	6 cut(s)	582, 798, 942, 1259, 1261, 1335
BstHHI	GCGC	2 cut(s)	582, 1261
BstKTI	GATC	8 cut(s)	975, 1069, 1257, 1285, 1326, 1400, 1623, 1659
BstMAI	GTCTC	4 cut(s)	737, 1005, 1189, 1518
BstMBI	GATC	8 cut(s)	972, 1066, 1254, 1282, 1323, 1397, 1620, 1656
BstMCI	CGRYCG	5 cut(s)	280, 337, 444, 753, 1405
BstMWI	GCNNNNNNNGC	8 cut(s)	146, 256, 337, 1410, 1558, 1677, 1807, 1846
BstNI	CCWGG	4 cut(s)	496, 598, 986, 1871
BstSLI	GKGCMC	2 cut(s)	17, 261
BstUI	CGCG	6 cut(s)	582, 798, 942, 1259, 1261, 1335
BstV1I	GCAGC	2 cut(s)	234, 1866
BstV2I	GAAGAC	6 cut(s)	169, 404, 529, 817, 848, 1344
BstX2I	RGATCY	2 cut(s)	1323, 1620
BstYI	RGATCY	2 cut(s)	1323, 1620
BstZI	CGGCCG	3 cut(s)	441, 750, 1402
BtgI	CCRYGG	1 cut(s)	940
BtgZI	GCGATG	1 cut(s)	1516
BtrI	CACGTC	4 cut(s)	1201, 1642, 1815, 1845
BtsCI	GGATG	1 cut(s)	1211
BtsI	GCAGTG	1 cut(s)	736
BtsIMutI	CAGTG	3 cut(s)	369, 736, 962
BtuMI	TCGCGA	1 cut(s)	1335
Cac8I	GCNNGC	3 cut(s)	204, 302, 1838
CfoI	GCGC	2 cut(s)	582, 1261
Cfr10I	RCCGGY	6 cut(s)	336, 991, 1103, 1409, 1548, 1732
Cfr13I	GGNCC	8 cut(s)	591, 651, 1220, 1249, 1407, 1484, 1867, 1889
Cfr42I	CCGCGG	1 cut(s)	943
Cfr9I	CCCGGG	2 cut(s)	419, 714
CpoI	CGGWCCG	1 cut(s)	1407
CseI	GACGC	3 cut(s)	1070, 1096, 1445
CsiI	ACCWGGT	1 cut(s)	596
Csp6I	GTAC	6 cut(s)	481, 928, 1243, 1762, 1774, 1825
CspCI	CAANNNNNGTGG	2 cut(s)	358, 393
CspI	CGGWCCG	1 cut(s)	1407
CviAII	CATG	3 cut(s)	757, 1311, 1501
CviQI	GTAC	6 cut(s)	481, 928, 1243, 1762, 1774, 1825
DdeI	CTNAG	7 cut(s)	77, 316, 372, 954, 1025, 1728, 1802
DpnI	GATC	8 cut(s)	974, 1068, 1256, 1284, 1325, 1399, 1622, 1658
DpnII	GATC	8 cut(s)	972, 1066, 1254, 1282, 1323, 1397, 1620, 1656
DrdI	GACNNNNNNGTC	1 cut(s)	533
DriI	GACNNNNNGTC	2 cut(s)	849, 1381
DseDI	GACNNNNNNGTC	1 cut(s)	533
EaeI	YGGCCR	5 cut(s)	37, 441, 750, 1402, 1411
EagI	CGGCCG	3 cut(s)	441, 750, 1402
Eam1104I	CTCTTC	2 cut(s)	275, 1546
Eam1105I	GACNNNNNGTC	2 cut(s)	849, 1381
EarI	CTCTTC	2 cut(s)	275, 1546
EciI	GGCGGA	3 cut(s)	62, 405, 1476
EclXI	CGGCCG	3 cut(s)	441, 750, 1402
Eco130I	CCWWGG	2 cut(s)	9, 1093
Eco24I	GRGCYC	2 cut(s)	9, 1187
Eco31I	GGTCTC	2 cut(s)	737, 1518
Eco47I	GGWCC	4 cut(s)	1249, 1407, 1867, 1889
Eco52I	CGGCCG	3 cut(s)	441, 750, 1402
Eco72I	CACGTG	2 cut(s)	817, 1627
Eco88I	CYCGRG	4 cut(s)	419, 714, 923, 1606
EcoO109I	RGGNCCY	1 cut(s)	1889
EcoRII	CCWGG	4 cut(s)	494, 596, 984, 1869
EcoT14I	CCWWGG	2 cut(s)	9, 1093
EcoT38I	GRGCYC	2 cut(s)	9, 1187
ErhI	CCWWGG	2 cut(s)	9, 1093
Esp3I	CGTCTC	1 cut(s)	1005
FaeI	CATG	3 cut(s)	760, 1314, 1504
FaiI	YATR	8 cut(s)	697, 758, 1205, 1207, 1217, 1312, 1502, 1669
FalI	AAGNNNNNCTT	2 cut(s)	293, 325
FaqI	GGGAC	3 cut(s)	477, 512, 1292
FatI	CATG	3 cut(s)	756, 1310, 1500
FauI	CCCGC	3 cut(s)	211, 578, 1624
FblI	GTMKAC	3 cut(s)	834, 950, 1434
Fnu4HI	GCNGC	9 cut(s)	248, 583, 753, 793, 796, 943, 964, 1877, 1880
FokI	GGATG	1 cut(s)	1198
FriOI	GRGCYC	2 cut(s)	9, 1187
Fsp4HI	GCNGC	9 cut(s)	248, 583, 753, 793, 796, 943, 964, 1877, 1880
GlaI	GCGC	2 cut(s)	581, 1260
GluI	GCNGC	9 cut(s)	248, 583, 753, 793, 796, 943, 964, 1877, 1880
GsuI	CTGGAG	3 cut(s)	1007, 1201, 1923
HgaI	GACGC	3 cut(s)	1070, 1096, 1445
HhaI	GCGC	2 cut(s)	582, 1261
Hin1I	GRCGYC	4 cut(s)	831, 1062, 1107, 1437
Hin1II	CATG	3 cut(s)	760, 1314, 1504
Hin6I	GCGC	2 cut(s)	580, 1259
HinP1I	GCGC	2 cut(s)	580, 1259
HincII	GTYRAC	7 cut(s)	411, 705, 835, 951, 1435, 1444, 1476
HindII	GTYRAC	7 cut(s)	411, 705, 835, 951, 1435, 1444, 1476
HpaI	GTTAAC	1 cut(s)	1444
Hpy188III	TCNNGA	8 cut(s)	292, 323, 346, 1045, 1058, 1085, 1252, 1334
HpyAV	CCTTC	5 cut(s)	1060, 1177, 1366, 1546, 1902
HpyCH4III	ACNGT	4 cut(s)	34, 437, 1249, 1292
HpyCH4V	TGCA	4 cut(s)	250, 695, 760, 1314
HpyF10VI	GCNNNNNNNGC	8 cut(s)	146, 256, 337, 1410, 1558, 1677, 1807, 1846
HpyF3I	CTNAG	7 cut(s)	77, 316, 372, 954, 1025, 1728, 1802
Hsp92I	GRCGYC	4 cut(s)	831, 1062, 1107, 1437
Hsp92II	CATG	3 cut(s)	760, 1314, 1504
HspAI	GCGC	2 cut(s)	580, 1259
KpnI	GGTACC	1 cut(s)	931
KspAI	GTTAAC	1 cut(s)	1444
KspI	CCGCGG	1 cut(s)	943
Kzo9I	GATC	8 cut(s)	972, 1066, 1254, 1282, 1323, 1397, 1620, 1656
LmnI	GCTCC	5 cut(s)	4, 86, 988, 1182, 1373
Lsp1109I	GCAGC	2 cut(s)	234, 1866
LweI	GCATC	2 cut(s)	855, 1558
MabI	ACCWGGT	1 cut(s)	596
MaeIII	GTNAC	6 cut(s)	718, 856, 1006, 1233, 1611, 1720
MalI	GATC	8 cut(s)	974, 1068, 1256, 1284, 1325, 1399, 1622, 1658
MboI	GATC	8 cut(s)	972, 1066, 1254, 1282, 1323, 1397, 1620, 1656
MflI	RGATCY	2 cut(s)	1323, 1620
MhlI	GDGCHC	4 cut(s)	9, 17, 261, 1187
MluCI	AATT	3 cut(s)	143, 663, 1922
MlyI	GAGTC	7 cut(s)	406, 602, 700, 905, 946, 956, 977
MmeI	TCCRAC	3 cut(s)	835, 1121, 1149
MroXI	GAANNNNTTC	1 cut(s)	845
MseI	TTAA	6 cut(s)	215, 1080, 1148, 1320, 1443, 1455
MslI	CAYNNNNRTG	3 cut(s)	863, 1566, 1854
MspA1I	CMGCKG	1 cut(s)	942
Mva1269I	GAATGC	1 cut(s)	250
MvaI	CCWGG	4 cut(s)	496, 598, 986, 1871
MvnI	CGCG	6 cut(s)	582, 798, 942, 1259, 1261, 1335
MwoI	GCNNNNNNNGC	8 cut(s)	146, 256, 337, 1410, 1558, 1677, 1807, 1846
NdeII	GATC	8 cut(s)	972, 1066, 1254, 1282, 1323, 1397, 1620, 1656
NlaIII	CATG	3 cut(s)	760, 1314, 1504
NlaIV	GGNNCC	7 cut(s)	6, 929, 990, 1184, 1485, 1622, 1890
NmeAIII	GCCGAG	1 cut(s)	1530
NmuCI	GTSAC	5 cut(s)	718, 856, 1006, 1233, 1720
NruI	TCGCGA	1 cut(s)	1335
NspV	TTCGAA	2 cut(s)	684, 1544
OliI	CACNNNNGTG	1 cut(s)	1854
PasI	CCCWGGG	1 cut(s)	495
PcsI	WCGNNNNNNNCGW	6 cut(s)	153, 330, 1068, 1122, 1263, 1484
PctI	GAATGC	1 cut(s)	250
PdmI	GAANNNNTTC	1 cut(s)	845
PfeI	GAWTC	6 cut(s)	228, 686, 774, 936, 1263, 1464
Pfl23II	CGTACG	2 cut(s)	480, 1761
PflFI	GACNNNGTC	2 cut(s)	530, 611
PkrI	GCNGC	9 cut(s)	249, 584, 754, 794, 797, 944, 965, 1878, 1881
PleI	GAGTC	7 cut(s)	406, 602, 700, 905, 946, 955, 976
PmaCI	CACGTG	2 cut(s)	817, 1627
PmlI	CACGTG	2 cut(s)	817, 1627
PpsI	GAGTC	7 cut(s)	406, 602, 700, 905, 946, 955, 976
Ppu21I	YACGTR	4 cut(s)	817, 1627, 1666, 1777
PpuMI	RGGWCCY	1 cut(s)	1889
Psp1406I	AACGTT	1 cut(s)	1317
Psp5II	RGGWCCY	1 cut(s)	1889
Psp6I	CCWGG	4 cut(s)	494, 596, 984, 1869
PspCI	CACGTG	2 cut(s)	817, 1627
PspGI	CCWGG	4 cut(s)	494, 596, 984, 1869
PspLI	CGTACG	2 cut(s)	480, 1761
PspN4I	GGNNCC	7 cut(s)	6, 929, 990, 1184, 1485, 1622, 1890
PspPI	GGNCC	8 cut(s)	591, 651, 1220, 1249, 1407, 1484, 1867, 1889
PspPPI	RGGWCCY	1 cut(s)	1889
PsuI	RGATCY	2 cut(s)	1323, 1620
PsyI	GACNNNGTC	2 cut(s)	530, 611
RruI	TCGCGA	1 cut(s)	1335
RsaI	GTAC	6 cut(s)	482, 929, 1244, 1763, 1775, 1826
RsaNI	GTAC	6 cut(s)	481, 928, 1243, 1762, 1774, 1825
RseI	CAYNNNNRTG	3 cut(s)	863, 1566, 1854
Rsr2I	CGGWCCG	1 cut(s)	1407
RsrII	CGGWCCG	1 cut(s)	1407
SacII	CCGCGG	1 cut(s)	943
SalI	GTCGAC	3 cut(s)	833, 949, 1433
SaqAI	TTAA	6 cut(s)	215, 1080, 1148, 1320, 1443, 1455
SatI	GCNGC	9 cut(s)	248, 583, 753, 793, 796, 943, 964, 1877, 1880
Sau3AI	GATC	8 cut(s)	972, 1066, 1254, 1282, 1323, 1397, 1620, 1656
Sau96I	GGNCC	8 cut(s)	591, 651, 1220, 1249, 1407, 1484, 1867, 1889
SchI	GAGTC	7 cut(s)	406, 602, 700, 905, 946, 956, 977
SduI	GDGCHC	4 cut(s)	9, 17, 261, 1187
SexAI	ACCWGGT	1 cut(s)	596
SfaNI	GCATC	2 cut(s)	855, 1558
SfiI	GGCCNNNNNGGCC	1 cut(s)	1410
Sfr303I	CCGCGG	1 cut(s)	943
SfuI	TTCGAA	2 cut(s)	684, 1544
SgrAI	CRCCGGYG	1 cut(s)	1103
SgrBI	CCGCGG	1 cut(s)	943
SinI	GGWCC	4 cut(s)	1249, 1407, 1867, 1889
SmaI	CCCGGG	2 cut(s)	421, 716
SmiMI	CAYNNNNRTG	3 cut(s)	863, 1566, 1854
SmlI	CTYRAG	1 cut(s)	1913
SmoI	CTYRAG	1 cut(s)	1913
Sse9I	AATT	3 cut(s)	143, 663, 1922
StyI	CCWWGG	2 cut(s)	9, 1093
TaaI	ACNGT	4 cut(s)	34, 437, 1249, 1292
TaqII	GACCGA	1 cut(s)	294
TasI	AATT	3 cut(s)	143, 663, 1922
TatI	WGTACW	1 cut(s)	1242
TauI	GCSGC	7 cut(s)	585, 755, 795, 798, 945, 966, 1879
TfiI	GAWTC	6 cut(s)	228, 686, 774, 936, 1263, 1464
Tru1I	TTAA	6 cut(s)	215, 1080, 1148, 1320, 1443, 1455
Tru9I	TTAA	6 cut(s)	215, 1080, 1148, 1320, 1443, 1455
TscAI	CASTG	3 cut(s)	376, 743, 962
TseFI	GTSAC	5 cut(s)	718, 856, 1006, 1233, 1720
TseI	GCWGC	2 cut(s)	247, 1879
Tsp45I	GTSAC	5 cut(s)	718, 856, 1006, 1233, 1720
TspDTI	ATGAA	2 cut(s)	169, 301
TspGWI	ACGGA	8 cut(s)	244, 601, 714, 780, 839, 1457, 1493, 1630
TspMI	CCCGGG	2 cut(s)	419, 714
TspRI	CASTG	3 cut(s)	376, 743, 962
Tth111I	GACNNNGTC	2 cut(s)	530, 611
VpaK11BI	GGWCC	4 cut(s)	1249, 1407, 1867, 1889
XmaI	CCCGGG	2 cut(s)	419, 714
XmiI	GTMKAC	3 cut(s)	834, 950, 1434
XmnI	GAANNNNTTC	1 cut(s)	845
ZraI	GACGTC	1 cut(s)	832

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.