Rroxscaffold_6G00395800

WD40-like Beta Propeller Repeat

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000006
OG0002386
Physical Location & Seq
Forward (+)
16971767 .. 16973755
1989 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_6G00395800.1

Sequence Viewer

Length: 1989 bp
ATGCTTCGTCATTTTGTACCTATAAAATCCACTCTATCCAAAATGGAGCCCAAGGGCACTCTCATCTTCTCCACCGTTGGCCGACCCCACTACGGCTTCGACCTATTCTCCCTCCGCCTCAGCTCCTCCCATCTCCCCCTCGAACACCGCCTCACCGACGGCAAATCTATCAACTTCAACGCCCAATTCTCCCACGACCACCACCAATCCATCGTCTTCATCTCCGAGCGAACCGGGTCGCCCGCCATTTACTTAACCCGACCAGGAATCCCCGACCCCCAGCTGCTGCATTCCGTGCCCGGAAGCCTCTTCCACGACCGACCCATCATCAAGGACGGCAAGCTCTACTTCATCTCAGCTCACGAACAGCCCGACCGGCTTTTCAAGAGCTGGTCTGCTCTCTACTCCACTGAGCTTGATGGTGAGAACGAAAGGAAAACCACCCGGTTGACTCCGCCCGGGTCTGTCGATTACAGTCCGGCCGTTTCTCTCTCCGGCGAGTTCGTCGCCGTCGCTTCATACGGCTCTCGTCCCTGGGACGGCGAGTTTCACCAGCTCAACACCGACATCGTCGTCTTCCGAGCCTCACAGCCCGGAGAGCGTGTGGTGGTCTGTGAGCGCGGCGGGTGGCCCACCTGGTCCGGCGACTCCGTCATCTACTTTCACCGCCAAGACAACGACGGCTGGTGGGCCATTTTCCGAATTGATTTCCCCCAGGATTTCGAATCCTCTGCATATCCGCTGACTCCCACTCGGGTCACTCCGTCGGGTCTCCACTGCTTCACTCCGGCAGCCATGCACGACGGAAAACGAATCGCCGTCGCCACTCGCCGCCGCGACACCAAGTTCCGACACGTGGAGGTCTTCGACGTCGACACGAAGACGTTCCGTCCTGTCACCTCGACGCTGAACCCGGATTTCCACCATTACAACCCGTTTGTTTCTCCGGACTCCGAGTTCCTCGGGTACCACCGATTCCGCGGCGAGTCGACTCAGTGGGGCGGCGAGTCGATCATTCCTCACCTGGAGCCGGTGTCGTCTCCCGTCACACATCTCCAAATGCTGAGGCTTCACGGTTTCTTCCCGTCTCTCTCTCCCGACGCCGATCTCGTCGCGTTTAATCCCGATTTCGAAGGAAACACCGGCGTCAAAATCGTCAAGTCCGACGGGTCAAAGAGTTGGACTTTAATCAAAGGCCGTACGGCCTTCTACAACTGCTGGAGCCCCACAGAGAGACACGTCATATACACATCCATAGGCCCAATCTTCCAGTCAGCAAAGTACACGGTCCAGATCGCGCGAATAGAGTTTGACCCGTCTGATCTGAACAGTGATAAGGAGGACGTCCCATGCAACGTTAAGATCCTCACTCGCGAAGACACAGGGAATAACGCCTTCGCTTCCTGCTCCCCAGACGGCAAGTCGCTCGTGTTCCGGTCCGGTCGGACCGGCCACAAGAACCTCTACATTGTCGACGCCTTTAACGGCGAGTTTAACGGAGGAATCCGTCGGTTGACGGAGGGGCCGTGTATTGATACCATGCCGAGCTGGTCGCCCAGAGGAGACCTCATCGCCTTCTCTTCGAACCGGCACAAACCGGACGATCATGCTGTGTTCAGCATTTACGTCATAAACCCGGACGGCTCGGGGTTACGGAGGATCCACGTGGCGGGGGATGACGTGGACAGGGAGAGGATCAACCACGTGTGCTTTAGTAGAGACGGGGAGTGGCTGCTGTTCACGGCTAACTTGGACGGCGTGACGGCTGAGCCGGTGTCGTTTCCGAACCAGTTTCAGCCGTACGGGGATTTGTACGTGGTGAGATTGGACGGGAGTGGGTTGAGGAGGCTGACGTGGAATGGGTACGAGAATGGCACGCCAACGTGGCACACGGGTGATGAGCTGGACTTGGGGCGGCTGCGTTTGGGTCCTTCCGAAGCTGGAGATAAACTCAAGGGTCAATTCGACGAACCTCATTGGATTTCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DPPIV_N PD40

Protein Analysis

662

Amino Acids

74.53

Weight (kDa)

6.24

Isoelectric Point (pI)

36.3

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Tricorn_N PF26549 460 - 554 6.7e-10 Tricorn protease N-terminal beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 572
AatII GACGTC 2 cut(s) 873, 1347
Acc65I GGTACC 1 cut(s) 966
AccB1I GGYRCC 1 cut(s) 966
AccI GTMKAC 3 cut(s) 873, 989, 1473
AccII CGCG 7 cut(s) 621, 837, 981, 1115, 1298, 1300, 1374
AccIII TCCGGA 1 cut(s) 946
AclI AACGTT 1 cut(s) 1356
AclWI GGATC 4 cut(s) 1357, 1654, 1667, 1703
AcoI YGGCCR 3 cut(s) 79, 480, 1450
AcvI CACGTG 3 cut(s) 856, 1666, 1705
AcyI GRCGYC 5 cut(s) 870, 1101, 1146, 1344, 1476
AfaI GTAC 7 cut(s) 18, 968, 1201, 1283, 1802, 1814, 1865
AfiI CCNNNNNNNGG 5 cut(s) 92, 539, 856, 1030, 1669
AflIII ACRYGT 3 cut(s) 853, 1237, 1704
AgsI TTSAA 2 cut(s) 178, 385
AhdI GACNNNNNGTC 2 cut(s) 888, 1420
AjiI CACGTC 3 cut(s) 1240, 1681, 1854
AjnI CCWGG 5 cut(s) 262, 533, 635, 714, 1023
AleI CACNNNNGTG 1 cut(s) 1893
AloI GAACNNNNNNTCC 2 cut(s) 941, 973
Alw26I GTCTC 6 cut(s) 776, 1044, 1092, 1228, 1557, 1713
AlwI GGATC 4 cut(s) 1357, 1654, 1667, 1703
AlwNI CAGNNNCTG 1 cut(s) 286
Ama87I CYCGRG 4 cut(s) 458, 753, 962, 1645
Aor13HI TCCGGA 1 cut(s) 946
AoxI GGCC 9 cut(s) 79, 480, 629, 690, 1195, 1203, 1258, 1450, 1523
ApeKI GCWGC 5 cut(s) 283, 286, 791, 1732, 1918
Asp700I GAANNNNTTC 1 cut(s) 884
Asp718I GGTACC 1 cut(s) 966
AspLEI GCGC 2 cut(s) 621, 1300
AspS9I GGNCC 9 cut(s) 630, 639, 690, 1259, 1288, 1437, 1446, 1523, 1928
AsuC2I CCSGG 8 cut(s) 235, 300, 445, 459, 460, 594, 914, 1637
AsuHPI GGTGA 8 cut(s) 145, 434, 542, 656, 889, 1013, 1831, 1907
AsuII TTCGAA 3 cut(s) 723, 1131, 1583
AvaI CYCGRG 4 cut(s) 458, 753, 962, 1645
AvaII GGWCC 5 cut(s) 639, 1288, 1437, 1446, 1928
BaeGI GKGCMC 2 cut(s) 59, 300
BamHI GGATCC 1 cut(s) 1659
BanI GGYRCC 1 cut(s) 966
BanII GRGCYC 2 cut(s) 51, 1226
BauI CACGAG 1 cut(s) 1427
BbrPI CACGTG 3 cut(s) 856, 1666, 1705
BbsI GAAGAC 5 cut(s) 208, 568, 856, 887, 1383
BbvCI CCTCAGC 2 cut(s) 119, 1064
BbvI GCAGC 5 cut(s) 270, 273, 803, 1719, 1905
BccI CCATC 4 cut(s) 138, 218, 332, 413
BcgI CGANNNNNNTGC 4 cut(s) 713, 747, 1408, 1442
BciT130I CCWGG 5 cut(s) 264, 535, 637, 716, 1025
BcnI CCSGG 8 cut(s) 235, 300, 445, 459, 460, 594, 914, 1637
BcoDI GTCTC 6 cut(s) 776, 1044, 1092, 1228, 1557, 1713
BglI GCCNNNNNGGC 2 cut(s) 376, 1885
BlpI GCTNAGC 1 cut(s) 1767
Bme18I GGWCC 5 cut(s) 639, 1288, 1437, 1446, 1928
BmeRI GACNNNNNGTC 2 cut(s) 888, 1420
BmeT110I CYCGRG 4 cut(s) 458, 753, 962, 1645
BmgBI CACGTC 3 cut(s) 1240, 1681, 1854
BmgT120I GGNCC 9 cut(s) 630, 639, 690, 1259, 1288, 1437, 1446, 1523, 1928
BmiI GGNNCC 7 cut(s) 48, 968, 1029, 1223, 1524, 1661, 1929
BpiI GAAGAC 5 cut(s) 208, 568, 856, 887, 1383
BplI GAGNNNNNCTC 4 cut(s) 1551, 1583, 1935, 1967
BpmI CTGGAG 3 cut(s) 1046, 1240, 1962
Bpu10I CCTNAGC 2 cut(s) 119, 1064
Bpu1102I GCTNAGC 1 cut(s) 1767
Bpu14I TTCGAA 3 cut(s) 723, 1131, 1583
BpuEI CTTGAG 1 cut(s) 1937
BpuMI CCSGG 8 cut(s) 235, 300, 445, 459, 460, 594, 914, 1637
BsaAI YACGTR 4 cut(s) 856, 1666, 1705, 1816
BsaHI GRCGYC 5 cut(s) 870, 1101, 1146, 1344, 1476
BsaI GGTCTC 2 cut(s) 776, 1557
BsaJI CCNNGG 7 cut(s) 51, 458, 533, 534, 714, 961, 979
BsaWI WCCGGW 4 cut(s) 946, 1434, 1439, 1597
BsaXI ACNNNNNCTCC 8 cut(s) 92, 122, 588, 618, 1019, 1049, 1511, 1541
Bsc4I CCNNNNNNNGG 5 cut(s) 92, 539, 856, 1030, 1669
Bse118I RCCGGY 6 cut(s) 375, 1030, 1142, 1448, 1587, 1771
Bse1I ACTGG 2 cut(s) 1270, 1789
BseAI TCCGGA 1 cut(s) 946
BseBI CCWGG 5 cut(s) 264, 535, 637, 716, 1025
BseDI CCNNGG 7 cut(s) 51, 458, 533, 534, 714, 961, 979
BseGI GGATG 2 cut(s) 1250, 1681
BseLI CCNNNNNNNGG 5 cut(s) 92, 539, 856, 1030, 1669
BseMII CTCAG 6 cut(s) 133, 369, 402, 1007, 1055, 1758
BseNI ACTGG 2 cut(s) 1270, 1789
BseRI GAGGAG 3 cut(s) 115, 1575, 1858
BseSI GKGCMC 2 cut(s) 59, 300
BseX3I CGGCCG 1 cut(s) 480
BseXI GCAGC 5 cut(s) 270, 273, 803, 1719, 1905
BseYI CCCAGC 1 cut(s) 279
Bsh1236I CGCG 7 cut(s) 621, 837, 981, 1115, 1298, 1300, 1374
Bsh1285I CGRYCG 4 cut(s) 319, 376, 483, 1444
BshFI GGCC 9 cut(s) 81, 482, 631, 692, 1197, 1205, 1260, 1452, 1525
BshNI GGYRCC 1 cut(s) 966
BsiEI CGRYCG 4 cut(s) 319, 376, 483, 1444
BsiHKCI CYCGRG 4 cut(s) 458, 753, 962, 1645
BsiWI CGTACG 2 cut(s) 1199, 1800
BslFI GGGAC 3 cut(s) 516, 551, 1331
BslI CCNNNNNNNGG 5 cut(s) 92, 539, 856, 1030, 1669
BsmAI GTCTC 6 cut(s) 776, 1044, 1092, 1228, 1557, 1713
BsmBI CGTCTC 3 cut(s) 1044, 1092, 1713
BsmFI GGGAC 3 cut(s) 516, 551, 1331
BsmI GAATGC 1 cut(s) 289
BsnI GGCC 9 cut(s) 81, 482, 631, 692, 1197, 1205, 1260, 1452, 1525
Bso31I GGTCTC 2 cut(s) 776, 1557
BsoBI CYCGRG 4 cut(s) 458, 753, 962, 1645
Bsp119I TTCGAA 3 cut(s) 723, 1131, 1583
Bsp1286I GDGCHC 4 cut(s) 51, 59, 300, 1226
Bsp13I TCCGGA 1 cut(s) 946
Bsp143I GATC 8 cut(s) 1011, 1105, 1293, 1321, 1362, 1603, 1659, 1695
Bsp1720I GCTNAGC 1 cut(s) 1767
Bsp68I TCGCGA 1 cut(s) 1374
BspANI GGCC 9 cut(s) 81, 482, 631, 692, 1197, 1205, 1260, 1452, 1525
BspCNI CTCAG 6 cut(s) 132, 368, 403, 1006, 1056, 1759
BspEI TCCGGA 1 cut(s) 946
BspFNI CGCG 7 cut(s) 621, 837, 981, 1115, 1298, 1300, 1374
BspLI GGNNCC 7 cut(s) 48, 968, 1029, 1223, 1524, 1661, 1929
BspPI GGATC 4 cut(s) 1357, 1654, 1667, 1703
BspT104I TTCGAA 3 cut(s) 723, 1131, 1583
BspT107I GGYRCC 1 cut(s) 966
BspTNI GGTCTC 2 cut(s) 776, 1557
BsrFI RCCGGY 6 cut(s) 375, 1030, 1142, 1448, 1587, 1771
BsrI ACTGG 2 cut(s) 1270, 1789
BssAI RCCGGY 6 cut(s) 375, 1030, 1142, 1448, 1587, 1771
BssECI CCNNGG 7 cut(s) 51, 458, 533, 534, 714, 961, 979
BssMI GATC 8 cut(s) 1011, 1105, 1293, 1321, 1362, 1603, 1659, 1695
BssNI GRCGYC 5 cut(s) 870, 1101, 1146, 1344, 1476
BssSI CACGAG 1 cut(s) 1427
BssT1I CCWWGG 1 cut(s) 51
Bst2BI CACGAG 1 cut(s) 1427
Bst2UI CCWGG 5 cut(s) 264, 535, 637, 716, 1025
Bst4CI ACNGT 5 cut(s) 76, 476, 1076, 1288, 1331
Bst6I CTCTTC 2 cut(s) 314, 1585
BstACI GRCGYC 5 cut(s) 870, 1101, 1146, 1344, 1476
BstAPI GCANNNNNTGC 1 cut(s) 295
BstBAI YACGTR 4 cut(s) 856, 1666, 1705, 1816
BstBI TTCGAA 3 cut(s) 723, 1131, 1583
BstC8I GCNNGC 3 cut(s) 243, 341, 1877
BstDEI CTNAG 6 cut(s) 119, 355, 411, 993, 1064, 1767
BstDSI CCRYGG 1 cut(s) 979
BstF5I GGATG 2 cut(s) 1250, 1681
BstFNI CGCG 7 cut(s) 621, 837, 981, 1115, 1298, 1300, 1374
BstHHI GCGC 2 cut(s) 621, 1300
BstKTI GATC 8 cut(s) 1014, 1108, 1296, 1324, 1365, 1606, 1662, 1698
BstMAI GTCTC 6 cut(s) 776, 1044, 1092, 1228, 1557, 1713
BstMBI GATC 8 cut(s) 1011, 1105, 1293, 1321, 1362, 1603, 1659, 1695
BstMCI CGRYCG 4 cut(s) 319, 376, 483, 1444
BstMWI GCNNNNNNNGC 4 cut(s) 295, 376, 598, 1885
BstNI CCWGG 5 cut(s) 264, 535, 637, 716, 1025
BstSLI GKGCMC 2 cut(s) 59, 300
BstUI CGCG 7 cut(s) 621, 837, 981, 1115, 1298, 1300, 1374
BstV1I GCAGC 5 cut(s) 270, 273, 803, 1719, 1905
BstV2I GAAGAC 5 cut(s) 208, 568, 856, 887, 1383
BstX2I RGATCY 2 cut(s) 1362, 1659
BstYI RGATCY 2 cut(s) 1362, 1659
BstZI CGGCCG 1 cut(s) 480
BsuRI GGCC 9 cut(s) 81, 482, 631, 692, 1197, 1205, 1260, 1452, 1525
BtgI CCRYGG 1 cut(s) 979
BtgZI GCGATG 1 cut(s) 1555
BtrI CACGTC 3 cut(s) 1240, 1681, 1854
BtsCI GGATG 2 cut(s) 1250, 1681
BtsI GCAGTG 1 cut(s) 775
BtsIMutI CAGTG 4 cut(s) 408, 775, 1001, 1336
BtuMI TCGCGA 1 cut(s) 1374
Cac8I GCNNGC 3 cut(s) 243, 341, 1877
CaiI CAGNNNCTG 1 cut(s) 286
CfoI GCGC 2 cut(s) 621, 1300
Cfr10I RCCGGY 6 cut(s) 375, 1030, 1142, 1448, 1587, 1771
Cfr13I GGNCC 9 cut(s) 630, 639, 690, 1259, 1288, 1437, 1446, 1523, 1928
Cfr42I CCGCGG 1 cut(s) 982
Cfr9I CCCGGG 1 cut(s) 458
CpoI CGGWCCG 2 cut(s) 1437, 1446
CseI GACGC 4 cut(s) 913, 1109, 1135, 1484
CsiI ACCWGGT 1 cut(s) 635
Csp6I GTAC 7 cut(s) 17, 967, 1200, 1282, 1801, 1813, 1864
CspCI CAANNNNNGTGG 2 cut(s) 397, 432
CspI CGGWCCG 2 cut(s) 1437, 1446
CviAII CATG 4 cut(s) 796, 1350, 1540, 1607
CviQI GTAC 7 cut(s) 17, 967, 1200, 1282, 1801, 1813, 1864
DdeI CTNAG 6 cut(s) 119, 355, 411, 993, 1064, 1767
DpnI GATC 8 cut(s) 1013, 1107, 1295, 1323, 1364, 1605, 1661, 1697
DpnII GATC 8 cut(s) 1011, 1105, 1293, 1321, 1362, 1603, 1659, 1695
DrdI GACNNNNNNGTC 1 cut(s) 572
DriI GACNNNNNGTC 2 cut(s) 888, 1420
DseDI GACNNNNNNGTC 1 cut(s) 572
EaeI YGGCCR 3 cut(s) 79, 480, 1450
EagI CGGCCG 1 cut(s) 480
Eam1104I CTCTTC 2 cut(s) 314, 1585
Eam1105I GACNNNNNGTC 2 cut(s) 888, 1420
EarI CTCTTC 2 cut(s) 314, 1585
EciI GGCGGA 2 cut(s) 104, 444
EclXI CGGCCG 1 cut(s) 480
Eco130I CCWWGG 1 cut(s) 51
Eco24I GRGCYC 2 cut(s) 51, 1226
Eco31I GGTCTC 2 cut(s) 776, 1557
Eco47I GGWCC 5 cut(s) 639, 1288, 1437, 1446, 1928
Eco52I CGGCCG 1 cut(s) 480
Eco72I CACGTG 3 cut(s) 856, 1666, 1705
Eco88I CYCGRG 4 cut(s) 458, 753, 962, 1645
EcoO109I RGGNCCY 1 cut(s) 1928
EcoRII CCWGG 5 cut(s) 262, 533, 635, 714, 1023
EcoT14I CCWWGG 1 cut(s) 51
EcoT38I GRGCYC 2 cut(s) 51, 1226
ErhI CCWWGG 1 cut(s) 51
Esp3I CGTCTC 3 cut(s) 1044, 1092, 1713
FaeI CATG 4 cut(s) 799, 1353, 1543, 1610
FalI AAGNNNNNCTT 2 cut(s) 332, 364
FaqI GGGAC 3 cut(s) 516, 551, 1331
FatI CATG 4 cut(s) 795, 1349, 1539, 1606
FauI CCCGC 3 cut(s) 250, 617, 1663
FblI GTMKAC 3 cut(s) 873, 989, 1473
FokI GGATG 2 cut(s) 1237, 1688
FriOI GRGCYC 2 cut(s) 51, 1226
GlaI GCGC 2 cut(s) 620, 1299
GsaI CCCAGC 1 cut(s) 283
GsuI CTGGAG 3 cut(s) 1046, 1240, 1962
HaeIII GGCC 9 cut(s) 81, 482, 631, 692, 1197, 1205, 1260, 1452, 1525
HgaI GACGC 4 cut(s) 913, 1109, 1135, 1484
HhaI GCGC 2 cut(s) 621, 1300
Hin1I GRCGYC 5 cut(s) 870, 1101, 1146, 1344, 1476
Hin1II CATG 4 cut(s) 799, 1353, 1543, 1610
Hin6I GCGC 2 cut(s) 619, 1298
HinP1I GCGC 2 cut(s) 619, 1298
HincII GTYRAC 5 cut(s) 450, 874, 990, 1474, 1515
HindII GTYRAC 5 cut(s) 450, 874, 990, 1474, 1515
HphI GGTGA 8 cut(s) 145, 434, 542, 656, 889, 1013, 1831, 1907
Hpy166II GTNNAC 8 cut(s) 450, 874, 990, 1284, 1474, 1515, 1684, 1740
Hpy188III TCNNGA 8 cut(s) 362, 385, 947, 1097, 1124, 1291, 1373, 1986
Hpy8I GTNNAC 8 cut(s) 450, 874, 990, 1284, 1474, 1515, 1684, 1740
HpyAV CCTTC 5 cut(s) 1127, 1216, 1405, 1585, 1941
HpyCH4III ACNGT 5 cut(s) 76, 476, 1076, 1288, 1331
HpyCH4V TGCA 4 cut(s) 289, 734, 799, 1353
HpyF10VI GCNNNNNNNGC 4 cut(s) 295, 376, 598, 1885
HpyF3I CTNAG 6 cut(s) 119, 355, 411, 993, 1064, 1767
Hsp92I GRCGYC 5 cut(s) 870, 1101, 1146, 1344, 1476
Hsp92II CATG 4 cut(s) 799, 1353, 1543, 1610
HspAI GCGC 2 cut(s) 619, 1298
Kpn2I TCCGGA 1 cut(s) 946
KpnI GGTACC 1 cut(s) 970
KspI CCGCGG 1 cut(s) 982
Kzo9I GATC 8 cut(s) 1011, 1105, 1293, 1321, 1362, 1603, 1659, 1695
LmnI GCTCC 5 cut(s) 46, 128, 1027, 1221, 1412
Lsp1109I GCAGC 5 cut(s) 270, 273, 803, 1719, 1905
MabI ACCWGGT 1 cut(s) 635
MaeIII GTNAC 5 cut(s) 757, 895, 1045, 1650, 1759
MalI GATC 8 cut(s) 1013, 1107, 1295, 1323, 1364, 1605, 1661, 1697
MboI GATC 8 cut(s) 1011, 1105, 1293, 1321, 1362, 1603, 1659, 1695
MflI RGATCY 2 cut(s) 1362, 1659
MhlI GDGCHC 4 cut(s) 51, 59, 300, 1226
MluCI AATT 3 cut(s) 185, 702, 1961
MlyI GAGTC 7 cut(s) 445, 641, 739, 944, 985, 995, 1016
MmeI TCCRAC 4 cut(s) 874, 1160, 1188, 1424
MroI TCCGGA 1 cut(s) 946
MroXI GAANNNNTTC 1 cut(s) 884
MseI TTAA 6 cut(s) 254, 1119, 1187, 1359, 1482, 1494
MslI CAYNNNNRTG 1 cut(s) 1893
MspA1I CMGCKG 3 cut(s) 283, 742, 981
Mva1269I GAATGC 1 cut(s) 289
MvaI CCWGG 5 cut(s) 264, 535, 637, 716, 1025
MvnI CGCG 7 cut(s) 621, 837, 981, 1115, 1298, 1300, 1374
MwoI GCNNNNNNNGC 4 cut(s) 295, 376, 598, 1885
NciI CCSGG 8 cut(s) 235, 300, 445, 459, 460, 594, 914, 1637
NdeII GATC 8 cut(s) 1011, 1105, 1293, 1321, 1362, 1603, 1659, 1695
NlaIII CATG 4 cut(s) 799, 1353, 1543, 1610
NlaIV GGNNCC 7 cut(s) 48, 968, 1029, 1223, 1524, 1661, 1929
NmeAIII GCCGAG 1 cut(s) 1569
NmuCI GTSAC 4 cut(s) 757, 895, 1045, 1759
NruI TCGCGA 1 cut(s) 1374
NspV TTCGAA 3 cut(s) 723, 1131, 1583
OliI CACNNNNGTG 1 cut(s) 1893
PasI CCCWGGG 1 cut(s) 534
PcsI WCGNNNNNNNCGW 4 cut(s) 369, 1107, 1161, 1523
PctI GAATGC 1 cut(s) 289
PdmI GAANNNNTTC 1 cut(s) 884
PfeI GAWTC 5 cut(s) 267, 725, 813, 975, 1503
Pfl23II CGTACG 2 cut(s) 1199, 1800
PflFI GACNNNGTC 2 cut(s) 569, 650
PleI GAGTC 7 cut(s) 445, 641, 739, 944, 985, 994, 1015
PmaCI CACGTG 3 cut(s) 856, 1666, 1705
PmlI CACGTG 3 cut(s) 856, 1666, 1705
PpsI GAGTC 7 cut(s) 445, 641, 739, 944, 985, 994, 1015
Ppu21I YACGTR 4 cut(s) 856, 1666, 1705, 1816
PpuMI RGGWCCY 1 cut(s) 1928
Psp1406I AACGTT 1 cut(s) 1356
Psp5II RGGWCCY 1 cut(s) 1928
Psp6I CCWGG 5 cut(s) 262, 533, 635, 714, 1023
PspCI CACGTG 3 cut(s) 856, 1666, 1705
PspFI CCCAGC 1 cut(s) 279
PspGI CCWGG 5 cut(s) 262, 533, 635, 714, 1023
PspLI CGTACG 2 cut(s) 1199, 1800
PspN4I GGNNCC 7 cut(s) 48, 968, 1029, 1223, 1524, 1661, 1929
PspPI GGNCC 9 cut(s) 630, 639, 690, 1259, 1288, 1437, 1446, 1523, 1928
PspPPI RGGWCCY 1 cut(s) 1928
PstNI CAGNNNCTG 1 cut(s) 286
PsuI RGATCY 2 cut(s) 1362, 1659
PsyI GACNNNGTC 2 cut(s) 569, 650
PvuII CAGCTG 1 cut(s) 283
RruI TCGCGA 1 cut(s) 1374
RsaI GTAC 7 cut(s) 18, 968, 1201, 1283, 1802, 1814, 1865
RsaNI GTAC 7 cut(s) 17, 967, 1200, 1282, 1801, 1813, 1864
RseI CAYNNNNRTG 1 cut(s) 1893
Rsr2I CGGWCCG 2 cut(s) 1437, 1446
RsrII CGGWCCG 2 cut(s) 1437, 1446
SacII CCGCGG 1 cut(s) 982
SalI GTCGAC 3 cut(s) 872, 988, 1472
SaqAI TTAA 6 cut(s) 254, 1119, 1187, 1359, 1482, 1494
Sau3AI GATC 8 cut(s) 1011, 1105, 1293, 1321, 1362, 1603, 1659, 1695
Sau96I GGNCC 9 cut(s) 630, 639, 690, 1259, 1288, 1437, 1446, 1523, 1928
SchI GAGTC 7 cut(s) 445, 641, 739, 944, 985, 995, 1016
SduI GDGCHC 4 cut(s) 51, 59, 300, 1226
SexAI ACCWGGT 1 cut(s) 635
Sfr303I CCGCGG 1 cut(s) 982
SfuI TTCGAA 3 cut(s) 723, 1131, 1583
SgrAI CRCCGGYG 1 cut(s) 1142
SgrBI CCGCGG 1 cut(s) 982
SinI GGWCC 5 cut(s) 639, 1288, 1437, 1446, 1928
SmaI CCCGGG 1 cut(s) 460
SmiMI CAYNNNNRTG 1 cut(s) 1893
SmlI CTYRAG 1 cut(s) 1952
SmoI CTYRAG 1 cut(s) 1952
Sse9I AATT 3 cut(s) 185, 702, 1961
StyI CCWWGG 1 cut(s) 51
TaaI ACNGT 5 cut(s) 76, 476, 1076, 1288, 1331
TaqII GACCGA 1 cut(s) 333
TasI AATT 3 cut(s) 185, 702, 1961
TatI WGTACW 1 cut(s) 1281
TauI GCSGC 6 cut(s) 624, 834, 837, 984, 1005, 1918
TfiI GAWTC 5 cut(s) 267, 725, 813, 975, 1503
Tru1I TTAA 6 cut(s) 254, 1119, 1187, 1359, 1482, 1494
Tru9I TTAA 6 cut(s) 254, 1119, 1187, 1359, 1482, 1494
TscAI CASTG 4 cut(s) 415, 782, 1001, 1336
TseFI GTSAC 4 cut(s) 757, 895, 1045, 1759
TseI GCWGC 5 cut(s) 283, 286, 791, 1732, 1918
Tsp45I GTSAC 4 cut(s) 757, 895, 1045, 1759
TspDTI ATGAA 3 cut(s) 208, 340, 507
TspGWI ACGGA 9 cut(s) 283, 640, 753, 819, 878, 1496, 1512, 1532, 1669
TspMI CCCGGG 1 cut(s) 458
TspRI CASTG 4 cut(s) 415, 782, 1001, 1336
Tth111I GACNNNGTC 2 cut(s) 569, 650
VpaK11BI GGWCC 5 cut(s) 639, 1288, 1437, 1446, 1928
XmaI CCCGGG 1 cut(s) 458
XmiI GTMKAC 3 cut(s) 873, 989, 1473
XmnI GAANNNNTTC 1 cut(s) 884
ZraI GACGTC 2 cut(s) 871, 1345
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.