Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0001393

Physical Location & Seq

Genomic Coordinates Reverse (-)

34055849 .. 34057605

Gene Structure 1757 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G375500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 336 bp

ATGTCTAAGAAAACTGTAGTGTCAGTGGAACTGCTGTGTTCAAAGTGCAGGAAGAAGGTGATGAAGTTAATAGCAACGGTAGAAGGGATAACTTCCATTGTCCTGGACCCGTCAAAAAATACGGTGACAGTAACTGGGGATGCCGATCCAGTAAAGGTTATCAAGAAGGTAAGAAAATTCAGAAAATCTGCTTCCGTTGTGAGTATAGGTCCTCCACAGAGTGAGAAGAAGGATGAGAAGAAAGACCTTGTCCCTTACCCACCAAAGACATGTCAGAGATGCGATGTCTGGTATGTGATTGCTGAAGATGGTTACAATTATTGTTCCATAATGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002252 GO:0002376 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005975 GO:0006020 GO:0006066 GO:0006793 GO:0006796 GO:0006873 GO:0006950 GO:0006952 GO:0007275 GO:0008150 GO:0008152 GO:0009058 GO:0009605 GO:0009607 GO:0009615 GO:0009617 GO:0009620 GO:0009791 GO:0009987 GO:0010264 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0017144 GO:0019637 GO:0019725 GO:0019751 GO:0022622 GO:0030002 GO:0030320 GO:0030643 GO:0032501 GO:0032502 GO:0032942 GO:0032958 GO:0033517 GO:0035299 GO:0040007 GO:0042592 GO:0042742 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043647 GO:0044237 GO:0044238 GO:0044262 GO:0044281 GO:0044283 GO:0044424 GO:0044464 GO:0046165 GO:0046173 GO:0046835 GO:0048364 GO:0048527 GO:0048528 GO:0048731 GO:0048856 GO:0048878 GO:0050801 GO:0050832 GO:0050896 GO:0051607 GO:0051704 GO:0051707 GO:0051765 GO:0052746 GO:0055062 GO:0055081 GO:0055082 GO:0055083 GO:0065007 GO:0065008 GO:0071704 GO:0072501 GO:0072502 GO:0072505 GO:0072506 GO:0090407 GO:0090696 GO:0098542 GO:0098771 GO:0099402 GO:1901576 GO:1901615 GO:1901617

KEGG Pathways

Metabolic & Signaling

ko00562 ko01100 ko04070 map00562 map01100 map04070

Pfam Domains

Protein Families

HMA Ins_P5_2-kin

Protein Analysis

112

Amino Acids

12.37

Weight (kDa)

9.42

Isoelectric Point (pI)

23.67

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001393)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G05920 AT3G05920 AT5G26690
fragaria_vesca	FvH4_1g12761 FvH4_2g14710 FvH4_2g14740 FvH4_2g14740
malus_domestica	MD02G1143000.v1.1 MD08G1026800.v1.1 MD15G1023400.v1.1 MD15G1256400.v1.1
prunus_persica	Prupe.1G375500_v2.0.a1 Prupe.1G549900_v2.0.a1 Prupe.7G158500_v2.0.a1 Prupe.8G018500_v2.0.a1
pyrus_communis	pycom02g11240 pycom02g11290 pycom15g01940
rosa_chinensis	RchiOBHm_Chr2g0100871 RchiOBHm_Chr6g0301541
rosa_laevigata	RLG00000013314 RLG00000013315 RLG00000017020
rosa_multiflora	Rmu_co8340199.1_g000001 Rmu_sc0000469.1_g000006 Rmu_sc0000469.1_g000033 Rmu_sc0000469.1_g000034 Rmu_sc0001659.1_g000036 Rmu_sc0005546.1_g000001
rosa_roxburghii	Rroxscaffold_2G00141780 Rroxscaffold_7G00166670
rosa_rugosa	Rorug02G0093300 Rorug06G0107000 Rorug06G0305900
rosa_samantha	Rh1CG139800 Rh2AG140900 Rh2BG146000 Rh2CG147200 Rh2DG146600 Rh6AG217800 Rh6AG217900 Rh6AG218200 Rh6AG419600 Rh6BG221500 Rh6BG221600 Rh6BG425600 Rh6CG432700 Rh6DG418900
rosa_wichuraiana	Rw2G011050 Rw6G019060 Rw6G019070 Rw6G019110 Rw6G019120

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AclWI	GGATC	1 cut(s)	140
AcsI	RAATTY	1 cut(s)	176
AcuI	CTGAAG	1 cut(s)	324
AdeI	CACNNNGTG	1 cut(s)	221
AflIII	ACRYGT	1 cut(s)	269
AgsI	TTSAA	1 cut(s)	42
AjnI	CCWGG	1 cut(s)	102
AlwI	GGATC	1 cut(s)	140
AlwNI	CAGNNNCTG	1 cut(s)	134
ApoI	RAATTY	1 cut(s)	176
AspS9I	GGNCC	2 cut(s)	106, 209
AsuHPI	GGTGA	2 cut(s)	70, 136
AvaII	GGWCC	2 cut(s)	106, 209
BccI	CCATC	1 cut(s)	302
BciT130I	CCWGG	1 cut(s)	104
BfmI	CTRYAG	1 cut(s)	15
Bme1390I	CCNGG	1 cut(s)	104
Bme18I	GGWCC	2 cut(s)	106, 209
BmgT120I	GGNCC	2 cut(s)	106, 209
BmiI	GGNNCC	1 cut(s)	108
BmrFI	CCNGG	1 cut(s)	104
BmrI	ACTGGG	1 cut(s)	144
BmsI	GCATC	2 cut(s)	130, 269
BmuI	ACTGGG	1 cut(s)	144
BsaBI	GATNNNNATC	1 cut(s)	144
Bse1I	ACTGG	2 cut(s)	139, 149
Bse8I	GATNNNNATC	1 cut(s)	144
BseBI	CCWGG	1 cut(s)	104
BseGI	GGATG	2 cut(s)	145, 238
BseJI	GATNNNNATC	1 cut(s)	144
BseNI	ACTGG	2 cut(s)	139, 149
BsgI	GTGCAG	1 cut(s)	67
BslFI	GGGAC	1 cut(s)	236
BsmFI	GGGAC	1 cut(s)	236
Bsp143I	GATC	1 cut(s)	145
BspLI	GGNNCC	1 cut(s)	108
BspPI	GGATC	1 cut(s)	140
BsrI	ACTGG	2 cut(s)	139, 149
BssMI	GATC	1 cut(s)	145
Bst2UI	CCWGG	1 cut(s)	104
Bst4CI	ACNGT	4 cut(s)	16, 79, 124, 130
BstDEI	CTNAG	1 cut(s)	6
BstF5I	GGATG	2 cut(s)	145, 238
BstKTI	GATC	1 cut(s)	148
BstMBI	GATC	1 cut(s)	145
BstNI	CCWGG	1 cut(s)	104
BstNSI	RCATGY	1 cut(s)	273
BstSCI	CCNGG	1 cut(s)	102
BstSFI	CTRYAG	1 cut(s)	15
BstXI	CCANNNNNNTGG	1 cut(s)	103
BtgZI	GCGATG	1 cut(s)	297
BtsCI	GGATG	2 cut(s)	145, 238
BtsIMutI	CAGTG	1 cut(s)	30
CaiI	CAGNNNCTG	1 cut(s)	134
Cfr13I	GGNCC	2 cut(s)	106, 209
CviAII	CATG	1 cut(s)	270
DdeI	CTNAG	1 cut(s)	6
DpnI	GATC	1 cut(s)	147
DpnII	GATC	1 cut(s)	145
DraIII	CACNNNGTG	1 cut(s)	221
Eco47I	GGWCC	2 cut(s)	106, 209
Eco57I	CTGAAG	1 cut(s)	324
EcoO109I	RGGNCCY	1 cut(s)	209
EcoRII	CCWGG	1 cut(s)	102
FaeI	CATG	1 cut(s)	273
FaiI	YATR	4 cut(s)	206, 271, 294, 329
FaqI	GGGAC	1 cut(s)	236
FatI	CATG	1 cut(s)	269
FokI	GGATG	2 cut(s)	152, 245
Hin1II	CATG	1 cut(s)	273
HphI	GGTGA	2 cut(s)	70, 136
Hpy188I	TCNGA	2 cut(s)	182, 276
Hpy188III	TCNNGA	1 cut(s)	163
HpyAV	CCTTC	4 cut(s)	49, 77, 160, 223
HpyCH4III	ACNGT	4 cut(s)	16, 79, 124, 130
HpyCH4V	TGCA	1 cut(s)	48
HpyF3I	CTNAG	1 cut(s)	6
Hsp92II	CATG	1 cut(s)	273
Kzo9I	GATC	1 cut(s)	145
LpnPI	CCDG	6 cut(s)	34, 89, 116, 120, 162, 274
LweI	GCATC	2 cut(s)	130, 269
MaeIII	GTNAC	3 cut(s)	124, 130, 311
MalI	GATC	1 cut(s)	147
MboI	GATC	1 cut(s)	145
MboII	GAAGA	4 cut(s)	64, 238, 250, 317
MluCI	AATT	2 cut(s)	176, 316
MnlI	CCTC	1 cut(s)	222
MseI	TTAA	1 cut(s)	68
MspR9I	CCNGG	1 cut(s)	104
MvaI	CCWGG	1 cut(s)	104
NdeII	GATC	1 cut(s)	145
NlaIII	CATG	1 cut(s)	273
NlaIV	GGNNCC	1 cut(s)	108
NmuCI	GTSAC	1 cut(s)	124
NspI	RCATGY	1 cut(s)	273
PciI	ACATGT	1 cut(s)	269
PflFI	GACNNNGTC	1 cut(s)	248
PfoI	TCCNGGA	1 cut(s)	102
PpuMI	RGGWCCY	1 cut(s)	209
PscI	ACATGT	1 cut(s)	269
Psp5II	RGGWCCY	1 cut(s)	209
Psp6I	CCWGG	1 cut(s)	102
PspGI	CCWGG	1 cut(s)	102
PspN4I	GGNNCC	1 cut(s)	108
PspPI	GGNCC	2 cut(s)	106, 209
PspPPI	RGGWCCY	1 cut(s)	209
PstNI	CAGNNNCTG	1 cut(s)	134
PsyI	GACNNNGTC	1 cut(s)	248
SaqAI	TTAA	1 cut(s)	68
Sau3AI	GATC	1 cut(s)	145
Sau96I	GGNCC	2 cut(s)	106, 209
ScrFI	CCNGG	1 cut(s)	104
SetI	ASST	5 cut(s)	60, 159, 171, 211, 249
SfaNI	GCATC	2 cut(s)	130, 269
SfcI	CTRYAG	1 cut(s)	15
SinI	GGWCC	2 cut(s)	106, 209
Sse9I	AATT	2 cut(s)	176, 316
StyD4I	CCNGG	1 cut(s)	102
TaaI	ACNGT	4 cut(s)	16, 79, 124, 130
TasI	AATT	2 cut(s)	176, 316
Tru1I	TTAA	1 cut(s)	68
Tru9I	TTAA	1 cut(s)	68
TscAI	CASTG	1 cut(s)	30
TseFI	GTSAC	1 cut(s)	124
Tsp45I	GTSAC	1 cut(s)	124
TspDTI	ATGAA	1 cut(s)	77
TspGWI	ACGGA	1 cut(s)	184
TspRI	CASTG	1 cut(s)	30
Tth111I	GACNNNGTC	1 cut(s)	248
VpaK11BI	GGWCC	2 cut(s)	106, 209
XapI	RAATTY	1 cut(s)	176
XceI	RCATGY	1 cut(s)	273

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.