Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0003321

Physical Location & Seq

Genomic Coordinates Forward (+)

36879666 .. 36881160

Gene Structure 1495 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G430200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 795 bp

ATGGCCATGGTTTTATTGGCTACTCTATTTTCTCTATTGCTAGCAGCAACCCAATTCAATGTAGGCGCTTGTGCTGGCAACAAGAACATCTTCATCCTCGCAGGCCAGAGCAACATGGCAGGACGAGGAGGCGTCAGTGGAGGCAAATGGCACGGCAATGTCCCGCCCGAGTGCCAGCCCAGATCGTCAATCGTCCGACTCAGTGCTCAACTCAGATGGGAACAAGCACATGAGCCGCTCCACGCTGACATTGATGTGGGCAAGACATGTGGGGTTGGGCCAGGCATGGCTTTTGCCGATGAGGTTCTCAGAGCCAGGGGCTCAAGATTTGGGGTCTTGGGTCTGGTTCCCTGCGCTGTGGGTGGGACGAGAATCGGTGAGTGGGCTCGAGGGACTCGGTTGTATAACGAGTTGGTGAGACGAGCCACCGAGTCAGTCAGGGACGGTGGAGTTATCAGAGCGGTTTTGTGGTACCAGGGAGAGAGTGACACCGTGAACAGAGTGGATGCTGAGGGGTATAAAGGGAATTTCGAAAGGCTTGTTATGGACCTGCGTTGTGATCTTAAGAATCCAAATCTTCCTGTCATCCAGGTAGCATTGGCATCAGGAGAAGGGCAGTTTGTAGATGTAGTGAGGAAAGGTCAGCTTGGTGTCAAGTTAGGCAATGTCGAATGTGTTGATGCAAAAGGCCTGCGTCTGAAAGAAGATGACCTCCACCTCACTACCATATCTGAGGTCCACCTGGGGATCAAGTTAGCTCGTTCTTTTCTTAATTCTTTTGGGCATCACCTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

SASA

Protein Analysis

265

Amino Acids

28.47

Weight (kDa)

8.78

Isoelectric Point (pI)

30.51

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003321)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G34215 AT4G34215
fragaria_vesca	FvH4_2g05290 FvH4_2g05290 FvH4_2g33790
malus_domestica	MD15G1076800.v1.1
prunus_persica	Prupe.1G430200_v2.0.a1 Prupe.8G134400_v2.0.a1 Prupe.8G134400_v2.0.a1
pyrus_communis	pycom10g08260 pycom15g07160
rosa_chinensis	RchiOBHm_Chr6g0255411 RchiOBHm_Chr6g0255421
rosa_laevigata	RLG00000010621 RLG00000014839 RLG00000014840
rosa_multiflora	Rmu_sc0002360.1_g000013 Rmu_sc0015750.1_g000001 Rmu_sc0015750.1_g000003
rosa_roxburghii	Rroxscaffold_7G00210000 Rroxscaffold_7G00210010
rosa_rugosa	Rorug05G0558400 Rorug05G0558500 Rorug05G0558600
rosa_samantha	Rh6AG075100 Rh6AG075200 Rh6BG068500 Rh6BG068600 Rh6BG069000 Rh6CG068100 Rh6CG068200 Rh6CG494100 Rh6CG494200 Rh6DG064800 Rh6DG065000
rosa_wichuraiana	Rw6G006630

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	558
Acc65I	GGTACC	1 cut(s)	471
AccB1I	GGYRCC	1 cut(s)	471
AccBSI	CCGCTC	2 cut(s)	238, 461
AciI	CCGC	3 cut(s)	164, 236, 461
AclWI	GGATC	1 cut(s)	755
AcoI	YGGCCR	1 cut(s)	3
AcsI	RAATTY	1 cut(s)	526
AcyI	GRCGYC	1 cut(s)	132
AfaI	GTAC	1 cut(s)	473
AflII	CTTAAG	1 cut(s)	563
AflIII	ACRYGT	1 cut(s)	266
AgsI	TTSAA	1 cut(s)	58
AjnI	CCWGG	5 cut(s)	280, 314, 474, 588, 741
AluBI	AGCT	2 cut(s)	646, 758
AluI	AGCT	2 cut(s)	646, 758
Alw21I	GWGCWC	1 cut(s)	208
Alw26I	GTCTC	1 cut(s)	412
AlwI	GGATC	1 cut(s)	755
Ama87I	CYCGRG	2 cut(s)	167, 387
AoxI	GGCC	4 cut(s)	3, 103, 278, 688
ApeKI	GCWGC	1 cut(s)	44
ApoI	RAATTY	1 cut(s)	526
Asp700I	GAANNNNTTC	1 cut(s)	89
Asp718I	GGTACC	1 cut(s)	471
AspLEI	GCGC	2 cut(s)	68, 356
AspS9I	GGNCC	3 cut(s)	278, 547, 736
AsuHPI	GGTGA	3 cut(s)	389, 427, 779
AsuII	TTCGAA	1 cut(s)	531
AsuNHI	GCTAGC	1 cut(s)	40
AvaI	CYCGRG	2 cut(s)	167, 387
AvaII	GGWCC	2 cut(s)	547, 736
BalI	TGGCCA	1 cut(s)	5
BanI	GGYRCC	1 cut(s)	471
BanII	GRGCYC	2 cut(s)	323, 388
Bbv12I	GWGCWC	1 cut(s)	208
BbvCI	CCTCAGC	1 cut(s)	510
BbvI	GCAGC	1 cut(s)	56
BccI	CCATC	1 cut(s)	210
BceAI	ACGGC	1 cut(s)	169
BciT130I	CCWGG	5 cut(s)	282, 316, 476, 590, 743
BcoDI	GTCTC	1 cut(s)	412
BfaI	CTAG	1 cut(s)	41
BfoI	RGCGCY	1 cut(s)	69
BfrI	CTTAAG	1 cut(s)	563
BfuAI	ACCTGC	1 cut(s)	558
BisI	GCNGC	2 cut(s)	45, 236
BlsI	GCNGC	2 cut(s)	46, 237
Bme1390I	CCNGG	5 cut(s)	282, 316, 476, 590, 743
Bme18I	GGWCC	2 cut(s)	547, 736
BmeT110I	CYCGRG	2 cut(s)	167, 387
BmgT120I	GGNCC	3 cut(s)	278, 547, 736
BmiI	GGNNCC	2 cut(s)	348, 473
BmrFI	CCNGG	5 cut(s)	282, 316, 476, 590, 743
BmsI	GCATC	3 cut(s)	496, 611, 670
BmtI	GCTAGC	1 cut(s)	44
Bpu10I	CCTNAGC	1 cut(s)	510
Bpu14I	TTCGAA	1 cut(s)	531
BpuEI	CTTGAG	1 cut(s)	307
BsaHI	GRCGYC	1 cut(s)	132
BsaJI	CCNNGG	4 cut(s)	6, 315, 475, 742
Bse3DI	GCAATG	2 cut(s)	163, 670
BseBI	CCWGG	5 cut(s)	282, 316, 476, 590, 743
BseDI	CCNNGG	4 cut(s)	6, 315, 475, 742
BseGI	GGATG	3 cut(s)	93, 511, 585
BseMI	GCAATG	2 cut(s)	163, 670
BseMII	CTCAG	5 cut(s)	214, 226, 322, 501, 723
BseRI	GAGGAG	1 cut(s)	141
BseXI	GCAGC	1 cut(s)	56
BshFI	GGCC	4 cut(s)	5, 105, 280, 690
BshNI	GGYRCC	1 cut(s)	471
BsiHKAI	GWGCWC	1 cut(s)	208
BsiHKCI	CYCGRG	2 cut(s)	167, 387
BslFI	GGGAC	4 cut(s)	146, 379, 406, 455
BsmAI	GTCTC	1 cut(s)	412
BsmBI	CGTCTC	1 cut(s)	412
BsmFI	GGGAC	4 cut(s)	146, 379, 406, 455
BsnI	GGCC	4 cut(s)	5, 105, 280, 690
BsoBI	CYCGRG	2 cut(s)	167, 387
Bsp119I	TTCGAA	1 cut(s)	531
Bsp1286I	GDGCHC	3 cut(s)	208, 323, 388
Bsp143I	GATC	3 cut(s)	182, 559, 747
Bsp19I	CCATGG	1 cut(s)	6
BspACI	CCGC	3 cut(s)	164, 236, 461
BspANI	GGCC	4 cut(s)	5, 105, 280, 690
BspCNI	CTCAG	5 cut(s)	213, 225, 321, 502, 724
BspLI	GGNNCC	2 cut(s)	348, 473
BspMI	ACCTGC	1 cut(s)	558
BspOI	GCTAGC	1 cut(s)	44
BspPI	GGATC	1 cut(s)	755
BspT104I	TTCGAA	1 cut(s)	531
BspT107I	GGYRCC	1 cut(s)	471
BspTI	CTTAAG	1 cut(s)	563
BsrBI	CCGCTC	2 cut(s)	238, 461
BsrDI	GCAATG	2 cut(s)	163, 670
BssECI	CCNNGG	4 cut(s)	6, 315, 475, 742
BssMI	GATC	3 cut(s)	182, 559, 747
BssNI	GRCGYC	1 cut(s)	132
BssT1I	CCWWGG	1 cut(s)	6
Bst2UI	CCWGG	5 cut(s)	282, 316, 476, 590, 743
Bst4CI	ACNGT	2 cut(s)	446, 493
BstACI	GRCGYC	1 cut(s)	132
BstAFI	CTTAAG	1 cut(s)	563
BstBI	TTCGAA	1 cut(s)	531
BstC8I	GCNNGC	5 cut(s)	42, 76, 103, 176, 692
BstDEI	CTNAG	5 cut(s)	200, 212, 308, 510, 732
BstDSI	CCRYGG	1 cut(s)	6
BstF5I	GGATG	3 cut(s)	93, 511, 585
BstH2I	RGCGCY	1 cut(s)	69
BstHHI	GCGC	2 cut(s)	68, 356
BstKTI	GATC	3 cut(s)	185, 562, 750
BstMAI	GTCTC	1 cut(s)	412
BstMBI	GATC	3 cut(s)	182, 559, 747
BstNI	CCWGG	5 cut(s)	282, 316, 476, 590, 743
BstNSI	RCATGY	1 cut(s)	270
BstSCI	CCNGG	5 cut(s)	280, 314, 474, 588, 741
BstV1I	GCAGC	1 cut(s)	56
BsuRI	GGCC	4 cut(s)	5, 105, 280, 690
BtgI	CCRYGG	1 cut(s)	6
BtsCI	GGATG	3 cut(s)	93, 511, 585
BtsIMutI	CAGTG	2 cut(s)	142, 208
BveI	ACCTGC	1 cut(s)	558
Cac8I	GCNNGC	5 cut(s)	42, 76, 103, 176, 692
CfoI	GCGC	2 cut(s)	68, 356
Cfr13I	GGNCC	3 cut(s)	278, 547, 736
CseI	GACGC	2 cut(s)	121, 683
Csp6I	GTAC	1 cut(s)	472
CspCI	CAANNNNNGTGG	2 cut(s)	250, 285
CviAII	CATG	5 cut(s)	7, 115, 230, 267, 286
CviQI	GTAC	1 cut(s)	472
DdeI	CTNAG	5 cut(s)	200, 212, 308, 510, 732
DpnI	GATC	3 cut(s)	184, 561, 749
DpnII	GATC	3 cut(s)	182, 559, 747
EaeI	YGGCCR	1 cut(s)	3
Eco130I	CCWWGG	1 cut(s)	6
Eco147I	AGGCCT	1 cut(s)	690
Eco24I	GRGCYC	2 cut(s)	323, 388
Eco47I	GGWCC	2 cut(s)	547, 736
Eco88I	CYCGRG	2 cut(s)	167, 387
EcoRII	CCWGG	5 cut(s)	280, 314, 474, 588, 741
EcoT14I	CCWWGG	1 cut(s)	6
EcoT38I	GRGCYC	2 cut(s)	323, 388
ErhI	CCWWGG	1 cut(s)	6
Esp3I	CGTCTC	1 cut(s)	412
FaeI	CATG	5 cut(s)	10, 118, 233, 270, 289
FaiI	YATR	9 cut(s)	8, 116, 231, 268, 287, 405, 519, 545, 728
FalI	AAGNNNNNCTT	4 cut(s)	74, 106, 630, 662
FaqI	GGGAC	4 cut(s)	146, 379, 406, 455
FatI	CATG	5 cut(s)	6, 114, 229, 266, 285
FauI	CCCGC	1 cut(s)	171
Fnu4HI	GCNGC	2 cut(s)	45, 236
FokI	GGATG	3 cut(s)	80, 518, 572
FriOI	GRGCYC	2 cut(s)	323, 388
Fsp4HI	GCNGC	2 cut(s)	45, 236
FspBI	CTAG	1 cut(s)	41
GlaI	GCGC	2 cut(s)	67, 355
GluI	GCNGC	2 cut(s)	45, 236
HaeII	RGCGCY	1 cut(s)	69
HaeIII	GGCC	4 cut(s)	5, 105, 280, 690
HgaI	GACGC	2 cut(s)	121, 683
HhaI	GCGC	2 cut(s)	68, 356
Hin1I	GRCGYC	1 cut(s)	132
Hin1II	CATG	5 cut(s)	10, 118, 233, 270, 289
Hin6I	GCGC	2 cut(s)	66, 354
HinP1I	GCGC	2 cut(s)	66, 354
HinfI	GANTC	5 cut(s)	198, 372, 394, 431, 568
HphI	GGTGA	3 cut(s)	389, 427, 779
Hpy166II	GTNNAC	2 cut(s)	496, 739
Hpy188I	TCNGA	6 cut(s)	197, 215, 311, 458, 699, 733
Hpy188III	TCNNGA	2 cut(s)	324, 606
Hpy8I	GTNNAC	2 cut(s)	496, 739
HpyAV	CCTTC	1 cut(s)	605
HpyCH4III	ACNGT	2 cut(s)	446, 493
HpyCH4V	TGCA	1 cut(s)	683
HpyF3I	CTNAG	5 cut(s)	200, 212, 308, 510, 732
Hsp92I	GRCGYC	1 cut(s)	132
Hsp92II	CATG	5 cut(s)	10, 118, 233, 270, 289
HspAI	GCGC	2 cut(s)	66, 354
KpnI	GGTACC	1 cut(s)	475
Kzo9I	GATC	3 cut(s)	182, 559, 747
LmnI	GCTCC	1 cut(s)	243
Lsp1109I	GCAGC	1 cut(s)	56
LweI	GCATC	3 cut(s)	496, 611, 670
MaeI	CTAG	1 cut(s)	41
MaeIII	GTNAC	1 cut(s)	485
MalI	GATC	3 cut(s)	184, 561, 749
MbiI	CCGCTC	2 cut(s)	238, 461
MboI	GATC	3 cut(s)	182, 559, 747
MboII	GAAGA	3 cut(s)	82, 569, 716
MhlI	GDGCHC	3 cut(s)	208, 323, 388
MlsI	TGGCCA	1 cut(s)	5
MluCI	AATT	3 cut(s)	53, 526, 772
MluNI	TGGCCA	1 cut(s)	5
MlyI	GAGTC	3 cut(s)	192, 388, 440
MmeI	TCCRAC	1 cut(s)	220
Mox20I	TGGCCA	1 cut(s)	5
MroXI	GAANNNNTTC	1 cut(s)	89
MscI	TGGCCA	1 cut(s)	5
MseI	TTAA	3 cut(s)	564, 771, 793
MslI	CAYNNNNRTG	2 cut(s)	156, 254
Msp20I	TGGCCA	1 cut(s)	5
MspCI	CTTAAG	1 cut(s)	563
MspR9I	CCNGG	5 cut(s)	282, 316, 476, 590, 743
MvaI	CCWGG	5 cut(s)	282, 316, 476, 590, 743
NcoI	CCATGG	1 cut(s)	6
NdeII	GATC	3 cut(s)	182, 559, 747
NheI	GCTAGC	1 cut(s)	40
NlaIII	CATG	5 cut(s)	10, 118, 233, 270, 289
NlaIV	GGNNCC	2 cut(s)	348, 473
NmuCI	GTSAC	1 cut(s)	485
NspI	RCATGY	1 cut(s)	270
NspV	TTCGAA	1 cut(s)	531
PaeR7I	CTCGAG	1 cut(s)	387
PceI	AGGCCT	1 cut(s)	690
PciI	ACATGT	1 cut(s)	266
PdmI	GAANNNNTTC	1 cut(s)	89
PfeI	GAWTC	2 cut(s)	372, 568
PkrI	GCNGC	2 cut(s)	46, 237
PleI	GAGTC	3 cut(s)	192, 388, 439
PpsI	GAGTC	3 cut(s)	192, 388, 439
PscI	ACATGT	1 cut(s)	266
Psp6I	CCWGG	5 cut(s)	280, 314, 474, 588, 741
PspGI	CCWGG	5 cut(s)	280, 314, 474, 588, 741
PspN4I	GGNNCC	2 cut(s)	348, 473
PspPI	GGNCC	3 cut(s)	278, 547, 736
PspXI	VCTCGAGB	1 cut(s)	387
RsaI	GTAC	1 cut(s)	473
RsaNI	GTAC	1 cut(s)	472
RseI	CAYNNNNRTG	2 cut(s)	156, 254
SaqAI	TTAA	3 cut(s)	564, 771, 793
SatI	GCNGC	2 cut(s)	45, 236
Sau3AI	GATC	3 cut(s)	182, 559, 747
Sau96I	GGNCC	3 cut(s)	278, 547, 736
SchI	GAGTC	3 cut(s)	192, 388, 440
ScrFI	CCNGG	5 cut(s)	282, 316, 476, 590, 743
SduI	GDGCHC	3 cut(s)	208, 323, 388
SfaNI	GCATC	3 cut(s)	496, 611, 670
Sfr274I	CTCGAG	1 cut(s)	387
SfuI	TTCGAA	1 cut(s)	531
SinI	GGWCC	2 cut(s)	547, 736
SlaI	CTCGAG	1 cut(s)	387
SmiMI	CAYNNNNRTG	2 cut(s)	156, 254
SmlI	CTYRAG	3 cut(s)	322, 387, 563
SmoI	CTYRAG	3 cut(s)	322, 387, 563
Sse9I	AATT	3 cut(s)	53, 526, 772
SseBI	AGGCCT	1 cut(s)	690
SsiI	CCGC	3 cut(s)	164, 236, 461
SspMI	CTAG	1 cut(s)	41
StuI	AGGCCT	1 cut(s)	690
StyD4I	CCNGG	5 cut(s)	280, 314, 474, 588, 741
StyI	CCWWGG	1 cut(s)	6
TaaI	ACNGT	2 cut(s)	446, 493
TaqI	TCGA	3 cut(s)	388, 531, 669
TasI	AATT	3 cut(s)	53, 526, 772
TauI	GCSGC	1 cut(s)	238
TfiI	GAWTC	2 cut(s)	372, 568
Tru1I	TTAA	3 cut(s)	564, 771, 793
Tru9I	TTAA	3 cut(s)	564, 771, 793
TscAI	CASTG	2 cut(s)	142, 208
TseFI	GTSAC	1 cut(s)	485
TseI	GCWGC	1 cut(s)	44
Tsp45I	GTSAC	1 cut(s)	485
TspDTI	ATGAA	1 cut(s)	82
TspRI	CASTG	2 cut(s)	142, 208
Vha464I	CTTAAG	1 cut(s)	563
VpaK11BI	GGWCC	2 cut(s)	547, 736
XapI	RAATTY	1 cut(s)	526
XceI	RCATGY	1 cut(s)	270
XcmI	CCANNNNNNNNNTGG	1 cut(s)	13
XhoI	CTCGAG	1 cut(s)	387
XmnI	GAANNNNTTC	1 cut(s)	89
XspI	CTAG	1 cut(s)	41

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.