Rmu_sc0015750.1_g000003

Carbohydrate esterase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0015750.1
Physical Location & Seq
Forward (+)
4234 .. 5842
1609 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0015750.1_g000003.1.cds

Sequence Viewer

Length: 1170 bp
atgaactccgaagtcgacccaattcgtattccattttcttctcgtttcccttcaaaccttaagcgatatcttctccaacgaatgagagacgaggatgaagagcaggctcttttaacccgtttgcttactctcctagttcactatctcaacgacaaagaggaagaggaagaggaggaggaggattctcaagagcatgaacaacaccgactcgctaaccggaagcggcgaagaactcgccgtcgcggcacaactacacgaagaagacgaaacgacggcgttccgggccaagcatacgctgggccccactcgccttcgttgacaagcgacgcggagtgcccatttaaacccgagaactcgctcattccaagaacaaaacccgacacgtcgtttatcctccttccgaaaatcccggaaatggagtcgccggagcagatcttcattctttcggggcagagcaacatggcgggtcggggcggcgtgatccgtgaccacggccacaaccaccaccagcattgggacggcgtcgttccgtcggaggctcagcccgacccttctatcctccgcctcaacgctcacctccactgggaggcggcgcgtgagcctctccacgccgacatcgacgccaagaaggtgtgcggtttgggtccgggaatgtcgttcgccaacgcggtgagggggcgcgtggaggggaagattgggctggtgccgtgcgctgttggcggcacggcgatcaaggagtgggcgcgtggggagcatctgtacgagaacatggtgaagagggcgcgtgagagcgtgaagaacgggggagagatcaaagggttgctgtggtaccagggggagagcgacacgtcgtctcagcatgatgttgaagcgtaccacgagaacatggttaggctcattgagaatgtgcgccaggaccttgcattgccttcacttccaattatccaggtggctatttgtcctggtgatgagaagttcttggagaaaattagggaggttcaattggggatgaaggttgagaatgttgtgcgtgtggatgccaagggattggagctgaaggatgatcatcttcacctgactaccaaggcacaagttcagttgggtcagatgcttgctgatgcttacctcaagcattttggatcagctaattcccatcatcctgccctttag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

389

Amino Acids

43.98

Weight (kDa)

6.38

Isoelectric Point (pI)

52.05

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 828
AccB1I GGYRCC 2 cut(s) 703, 828
AccI GTMKAC 1 cut(s) 15
AccII CGCG 7 cut(s) 243, 329, 595, 668, 681, 745, 784
AclWI GGATC 2 cut(s) 475, 1147
AcoI YGGCCR 1 cut(s) 493
AcuI CTGAAG 1 cut(s) 1076
AcyI GRCGYC 2 cut(s) 522, 621
AfaI GTAC 3 cut(s) 761, 830, 875
AfiI CCNNNNNNNGG 4 cut(s) 415, 514, 583, 586
AflII CTTAAG 1 cut(s) 59
AflIII ACRYGT 2 cut(s) 381, 846
AgsI TTSAA 3 cut(s) 54, 869, 1001
AhdI GACNNNNNGTC 1 cut(s) 850
AjiI CACGTC 2 cut(s) 384, 849
AjnI CCWGG 4 cut(s) 831, 912, 945, 961
AluBI AGCT 2 cut(s) 1054, 1145
AluI AGCT 2 cut(s) 1054, 1145
Alw26I GTCTC 2 cut(s) 81, 858
AlwI GGATC 2 cut(s) 475, 1147
Ama87I CYCGRG 1 cut(s) 347
AoxI GGCC 3 cut(s) 283, 299, 493
ApaI GGGCCC 1 cut(s) 303
Asp718I GGTACC 1 cut(s) 828
AspLEI GCGC 6 cut(s) 595, 681, 713, 745, 784, 912
AspS9I GGNCC 5 cut(s) 283, 299, 300, 644, 916
AsuC2I CCSGG 3 cut(s) 282, 410, 648
AsuHPI GGTGA 5 cut(s) 566, 682, 784, 977, 1064
AvaI CYCGRG 1 cut(s) 347
AvaII GGWCC 2 cut(s) 644, 916
BaeGI GKGCMC 2 cut(s) 303, 338
BanI GGYRCC 2 cut(s) 703, 828
BanII GRGCYC 1 cut(s) 303
BauI CACGAG 1 cut(s) 878
BbsI GAAGAC 1 cut(s) 268
BccI CCATC 1 cut(s) 1161
BceAI ACGGC 6 cut(s) 222, 289, 508, 535, 691, 741
BciT130I CCWGG 4 cut(s) 833, 914, 947, 963
BclI TGATCA 1 cut(s) 1063
BcnI CCSGG 3 cut(s) 282, 410, 648
BcoDI GTCTC 2 cut(s) 81, 858
BfaI CTAG 1 cut(s) 134
BfrI CTTAAG 1 cut(s) 59
BglI GCCNNNNNGGC 1 cut(s) 243
BglII AGATCT 1 cut(s) 432
BisI GCNGC 5 cut(s) 224, 244, 475, 591, 721
BlpI GCTNAGC 1 cut(s) 540
BlsI GCNGC 5 cut(s) 225, 245, 476, 592, 722
Bme1390I CCNGG 7 cut(s) 282, 410, 648, 833, 914, 947, 963
Bme18I GGWCC 2 cut(s) 644, 916
BmeRI GACNNNNNGTC 1 cut(s) 850
BmeT110I CYCGRG 1 cut(s) 347
BmgBI CACGTC 2 cut(s) 384, 849
BmgT120I GGNCC 5 cut(s) 283, 299, 300, 644, 916
BmiI GGNNCC 5 cut(s) 301, 302, 645, 705, 830
BmrFI CCNGG 7 cut(s) 282, 410, 648, 833, 914, 947, 963
BmrI ACTGGG 1 cut(s) 592
BmsI GCATC 4 cut(s) 763, 1027, 1098, 1108
BmuI ACTGGG 1 cut(s) 592
BpiI GAAGAC 1 cut(s) 268
Bpu1102I GCTNAGC 1 cut(s) 540
BpuEI CTTGAG 2 cut(s) 171, 1112
BpuMI CCSGG 3 cut(s) 282, 410, 648
BsaBI GATNNNNATC 1 cut(s) 1065
BsaHI GRCGYC 2 cut(s) 522, 621
BsaJI CCNNGG 4 cut(s) 490, 832, 1041, 1083
BsaWI WCCGGW 1 cut(s) 216
BsaXI ACNNNNNCTCC 2 cut(s) 743, 773
Bsc4I CCNNNNNNNGG 4 cut(s) 415, 514, 583, 586
Bse1I ACTGG 1 cut(s) 587
Bse3DI GCAATG 1 cut(s) 923
Bse8I GATNNNNATC 1 cut(s) 1065
BseBI CCWGG 4 cut(s) 833, 914, 947, 963
BseDI CCNNGG 4 cut(s) 490, 832, 1041, 1083
BseGI GGATG 5 cut(s) 100, 1014, 1042, 1066, 1156
BseJI GATNNNNATC 1 cut(s) 1065
BseLI CCNNNNNNNGG 4 cut(s) 415, 514, 583, 586
BseMI GCAATG 1 cut(s) 923
BseMII CTCAG 2 cut(s) 554, 869
BseNI ACTGG 1 cut(s) 587
BseRI GAGGAG 3 cut(s) 185, 188, 191
BseSI GKGCMC 2 cut(s) 303, 338
BseYI CCCAGC 1 cut(s) 296
Bsh1236I CGCG 7 cut(s) 243, 329, 595, 668, 681, 745, 784
BshFI GGCC 3 cut(s) 285, 301, 495
BshNI GGYRCC 2 cut(s) 703, 828
BsiHKCI CYCGRG 1 cut(s) 347
BsiSI CCGG 5 cut(s) 217, 281, 410, 425, 647
BslFI GGGAC 1 cut(s) 530
BslI CCNNNNNNNGG 4 cut(s) 415, 514, 583, 586
BsmAI GTCTC 2 cut(s) 81, 858
BsmBI CGTCTC 2 cut(s) 81, 858
BsmFI GGGAC 1 cut(s) 530
BsnI GGCC 3 cut(s) 285, 301, 495
BsoBI CYCGRG 1 cut(s) 347
Bsp120I GGGCCC 1 cut(s) 299
Bsp1286I GDGCHC 2 cut(s) 303, 338
Bsp143I GATC 6 cut(s) 432, 480, 729, 810, 1063, 1139
Bsp1720I GCTNAGC 1 cut(s) 540
BspANI GGCC 3 cut(s) 285, 301, 495
BspCNI CTCAG 2 cut(s) 553, 868
BspFNI CGCG 7 cut(s) 243, 329, 595, 668, 681, 745, 784
BspLI GGNNCC 5 cut(s) 301, 302, 645, 705, 830
BspPI GGATC 2 cut(s) 475, 1147
BspQI GCTCTTC 1 cut(s) 93
BspT107I GGYRCC 2 cut(s) 703, 828
BspTI CTTAAG 1 cut(s) 59
BsrDI GCAATG 1 cut(s) 923
BsrI ACTGG 1 cut(s) 587
BssECI CCNNGG 4 cut(s) 490, 832, 1041, 1083
BssMI GATC 6 cut(s) 432, 480, 729, 810, 1063, 1139
BssNI GRCGYC 2 cut(s) 522, 621
BssSI CACGAG 1 cut(s) 878
BssT1I CCWWGG 2 cut(s) 1041, 1083
Bst2BI CACGAG 1 cut(s) 878
Bst2UI CCWGG 4 cut(s) 833, 914, 947, 963
Bst6I CTCTTC 4 cut(s) 93, 156, 162, 770
BstACI GRCGYC 2 cut(s) 522, 621
BstAFI CTTAAG 1 cut(s) 59
BstC8I GCNNGC 2 cut(s) 105, 1113
BstDEI CTNAG 2 cut(s) 540, 855
BstDSI CCRYGG 1 cut(s) 490
BstF5I GGATG 5 cut(s) 100, 1014, 1042, 1066, 1156
BstFNI CGCG 7 cut(s) 243, 329, 595, 668, 681, 745, 784
BstHHI GCGC 6 cut(s) 595, 681, 713, 745, 784, 912
BstKTI GATC 6 cut(s) 435, 483, 732, 813, 1066, 1142
BstMAI GTCTC 2 cut(s) 81, 858
BstMBI GATC 6 cut(s) 432, 480, 729, 810, 1063, 1139
BstMWI GCNNNNNNNGC 5 cut(s) 243, 282, 307, 717, 751
BstNI CCWGG 4 cut(s) 833, 914, 947, 963
BstSCI CCNGG 7 cut(s) 280, 408, 646, 831, 912, 945, 961
BstSLI GKGCMC 2 cut(s) 303, 338
BstUI CGCG 7 cut(s) 243, 329, 595, 668, 681, 745, 784
BstV2I GAAGAC 1 cut(s) 268
BstX2I RGATCY 1 cut(s) 432
BstXI CCANNNNNNTGG 1 cut(s) 1048
BstYI RGATCY 1 cut(s) 432
BsuRI GGCC 3 cut(s) 285, 301, 495
BtgI CCRYGG 1 cut(s) 490
BtrI CACGTC 2 cut(s) 384, 849
BtsCI GGATG 5 cut(s) 100, 1014, 1042, 1066, 1156
BtsIMutI CAGTG 1 cut(s) 580
Cac8I GCNNGC 2 cut(s) 105, 1113
CfoI GCGC 6 cut(s) 595, 681, 713, 745, 784, 912
Cfr13I GGNCC 5 cut(s) 283, 299, 300, 644, 916
CseI GACGC 3 cut(s) 335, 511, 629
Csp6I GTAC 3 cut(s) 760, 829, 874
CspCI CAANNNNNGTGG 2 cut(s) 494, 529
CviAII CATG 5 cut(s) 194, 460, 769, 860, 886
CviQI GTAC 3 cut(s) 760, 829, 874
DdeI CTNAG 2 cut(s) 540, 855
DpnI GATC 6 cut(s) 434, 482, 731, 812, 1065, 1141
DpnII GATC 6 cut(s) 432, 480, 729, 810, 1063, 1139
DraI TTTAAA 1 cut(s) 343
DriI GACNNNNNGTC 1 cut(s) 850
EaeI YGGCCR 1 cut(s) 493
Eam1104I CTCTTC 4 cut(s) 93, 156, 162, 770
Eam1105I GACNNNNNGTC 1 cut(s) 850
EarI CTCTTC 4 cut(s) 93, 156, 162, 770
EciI GGCGGA 1 cut(s) 551
Eco130I CCWWGG 2 cut(s) 1041, 1083
Eco24I GRGCYC 1 cut(s) 303
Eco32I GATATC 1 cut(s) 68
Eco47I GGWCC 2 cut(s) 644, 916
Eco57I CTGAAG 1 cut(s) 1076
Eco88I CYCGRG 1 cut(s) 347
EcoO109I RGGNCCY 2 cut(s) 300, 916
EcoRII CCWGG 4 cut(s) 831, 912, 945, 961
EcoRV GATATC 1 cut(s) 68
EcoT14I CCWWGG 2 cut(s) 1041, 1083
EcoT38I GRGCYC 1 cut(s) 303
ErhI CCWWGG 2 cut(s) 1041, 1083
Esp3I CGTCTC 2 cut(s) 81, 858
FaeI CATG 5 cut(s) 197, 463, 772, 863, 889
FaiI YATR 6 cut(s) 195, 292, 461, 770, 861, 887
FaqI GGGAC 1 cut(s) 530
FatI CATG 5 cut(s) 193, 459, 768, 859, 885
FauI CCCGC 1 cut(s) 457
FbaI TGATCA 1 cut(s) 1063
FblI GTMKAC 1 cut(s) 15
Fnu4HI GCNGC 5 cut(s) 224, 244, 475, 591, 721
FokI GGATG 5 cut(s) 107, 1021, 1049, 1073, 1143
FriOI GRGCYC 1 cut(s) 303
Fsp4HI GCNGC 5 cut(s) 224, 244, 475, 591, 721
FspBI CTAG 1 cut(s) 134
GlaI GCGC 6 cut(s) 594, 680, 712, 744, 783, 911
GluI GCNGC 5 cut(s) 224, 244, 475, 591, 721
GsaI CCCAGC 1 cut(s) 300
HaeIII GGCC 3 cut(s) 285, 301, 495
HapII CCGG 5 cut(s) 217, 281, 410, 425, 647
HgaI GACGC 3 cut(s) 335, 511, 629
HhaI GCGC 6 cut(s) 595, 681, 713, 745, 784, 912
Hin1I GRCGYC 2 cut(s) 522, 621
Hin1II CATG 5 cut(s) 197, 463, 772, 863, 889
Hin6I GCGC 6 cut(s) 593, 679, 711, 743, 782, 910
HinP1I GCGC 6 cut(s) 593, 679, 711, 743, 782, 910
HincII GTYRAC 2 cut(s) 16, 318
HindII GTYRAC 2 cut(s) 16, 318
HinfI GANTC 3 cut(s) 182, 207, 419
HpaII CCGG 5 cut(s) 217, 281, 410, 425, 647
HphI GGTGA 5 cut(s) 566, 682, 784, 977, 1064
Hpy166II GTNNAC 3 cut(s) 16, 139, 318
Hpy188I TCNGA 4 cut(s) 10, 402, 535, 1107
Hpy188III TCNNGA 1 cut(s) 188
Hpy8I GTNNAC 3 cut(s) 16, 139, 318
Hpy99I CGWCG 8 cut(s) 243, 275, 329, 388, 527, 535, 623, 853
HpyAV CCTTC 8 cut(s) 60, 321, 407, 561, 622, 939, 1006, 1051
HpyCH4IV ACGT 2 cut(s) 383, 848
HpyCH4V TGCA 1 cut(s) 923
HpyF10VI GCNNNNNNNGC 5 cut(s) 243, 282, 307, 717, 751
HpyF3I CTNAG 2 cut(s) 540, 855
HpySE526I ACGT 2 cut(s) 383, 848
Hsp92I GRCGYC 2 cut(s) 522, 621
Hsp92II CATG 5 cut(s) 197, 463, 772, 863, 889
HspAI GCGC 6 cut(s) 593, 679, 711, 743, 782, 910
KpnI GGTACC 1 cut(s) 832
Ksp22I TGATCA 1 cut(s) 1063
Kzo9I GATC 6 cut(s) 432, 480, 729, 810, 1063, 1139
LguI GCTCTTC 1 cut(s) 93
LmnI GCTCC 3 cut(s) 427, 751, 1051
LweI GCATC 4 cut(s) 763, 1027, 1098, 1108
MaeI CTAG 1 cut(s) 134
MaeII ACGT 2 cut(s) 383, 848
MaeIII GTNAC 1 cut(s) 485
MalI GATC 6 cut(s) 434, 482, 731, 812, 1065, 1141
MboI GATC 6 cut(s) 432, 480, 729, 810, 1063, 1139
MfeI CAATTG 1 cut(s) 1001
MflI RGATCY 1 cut(s) 432
MhlI GDGCHC 2 cut(s) 303, 338
MluCI AATT 5 cut(s) 21, 939, 987, 1001, 1147
MlyI GAGTC 2 cut(s) 201, 428
MmeI TCCRAC 2 cut(s) 100, 513
MseI TTAA 3 cut(s) 60, 113, 342
MspCI CTTAAG 1 cut(s) 59
MspI CCGG 5 cut(s) 217, 281, 410, 425, 647
MspR9I CCNGG 7 cut(s) 282, 410, 648, 833, 914, 947, 963
MunI CAATTG 1 cut(s) 1001
MvaI CCWGG 4 cut(s) 833, 914, 947, 963
MvnI CGCG 7 cut(s) 243, 329, 595, 668, 681, 745, 784
MwoI GCNNNNNNNGC 5 cut(s) 243, 282, 307, 717, 751
NciI CCSGG 3 cut(s) 282, 410, 648
NdeII GATC 6 cut(s) 432, 480, 729, 810, 1063, 1139
NlaIII CATG 5 cut(s) 197, 463, 772, 863, 889
NlaIV GGNNCC 5 cut(s) 301, 302, 645, 705, 830
NmuCI GTSAC 1 cut(s) 485
PciSI GCTCTTC 1 cut(s) 93
PcsI WCGNNNNNNNCGW 2 cut(s) 262, 615
PfeI GAWTC 1 cut(s) 182
PflFI GACNNNGTC 1 cut(s) 521
PfoI TCCNGGA 2 cut(s) 408, 646
PkrI GCNGC 5 cut(s) 225, 245, 476, 592, 722
PleI GAGTC 2 cut(s) 201, 427
PpsI GAGTC 2 cut(s) 201, 427
PpuMI RGGWCCY 1 cut(s) 916
Psp5II RGGWCCY 1 cut(s) 916
Psp6I CCWGG 4 cut(s) 831, 912, 945, 961
PspFI CCCAGC 1 cut(s) 296
PspGI CCWGG 4 cut(s) 831, 912, 945, 961
PspN4I GGNNCC 5 cut(s) 301, 302, 645, 705, 830
PspOMI GGGCCC 1 cut(s) 299
PspPI GGNCC 5 cut(s) 283, 299, 300, 644, 916
PspPPI RGGWCCY 1 cut(s) 916
PsuI RGATCY 1 cut(s) 432
PsyI GACNNNGTC 1 cut(s) 521
RsaI GTAC 3 cut(s) 761, 830, 875
RsaNI GTAC 3 cut(s) 760, 829, 874
SalI GTCGAC 1 cut(s) 14
SapI GCTCTTC 1 cut(s) 93
SaqAI TTAA 3 cut(s) 60, 113, 342
SatI GCNGC 5 cut(s) 224, 244, 475, 591, 721
Sau3AI GATC 6 cut(s) 432, 480, 729, 810, 1063, 1139
Sau96I GGNCC 5 cut(s) 283, 299, 300, 644, 916
SchI GAGTC 2 cut(s) 201, 428
ScrFI CCNGG 7 cut(s) 282, 410, 648, 833, 914, 947, 963
SduI GDGCHC 2 cut(s) 303, 338
SfaNI GCATC 4 cut(s) 763, 1027, 1098, 1108
SinI GGWCC 2 cut(s) 644, 916
SmlI CTYRAG 3 cut(s) 59, 186, 1127
SmoI CTYRAG 3 cut(s) 59, 186, 1127
Sse9I AATT 5 cut(s) 21, 939, 987, 1001, 1147
SspMI CTAG 1 cut(s) 134
StyD4I CCNGG 7 cut(s) 280, 408, 646, 831, 912, 945, 961
StyI CCWWGG 2 cut(s) 1041, 1083
TaiI ACGT 2 cut(s) 386, 851
TaqI TCGA 2 cut(s) 15, 618
TasI AATT 5 cut(s) 21, 939, 987, 1001, 1147
TauI GCSGC 5 cut(s) 226, 246, 477, 593, 723
TfiI GAWTC 1 cut(s) 182
Tru1I TTAA 3 cut(s) 60, 113, 342
Tru9I TTAA 3 cut(s) 60, 113, 342
TscAI CASTG 1 cut(s) 587
TseFI GTSAC 1 cut(s) 485
Tsp45I GTSAC 1 cut(s) 485
TspDTI ATGAA 5 cut(s) 17, 111, 210, 427, 1025
TspGWI ACGGA 2 cut(s) 473, 519
TspRI CASTG 1 cut(s) 587
Tth111I GACNNNGTC 1 cut(s) 521
Vha464I CTTAAG 1 cut(s) 59
VpaK11BI GGWCC 2 cut(s) 644, 916
XcmI CCANNNNNNNNNTGG 1 cut(s) 293
XmiI GTMKAC 1 cut(s) 15
XspI CTAG 1 cut(s) 134
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.