Prupe.8G134400_v2.0.a1

Carbohydrate esterase

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
Physical Location & Seq
Reverse (-)
15532993 .. 15535669
2677 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.8G134400.1

Sequence Viewer

Length: 1092 bp
ATGCGTAATCAGCGACGCCGGTACCTCATTCAAGGCAAAGAACAAGAACAGGAAAAAGAAGAAGTCTCTATCCCCGCAACCAAACAACCCCCAGCCACGGAATCGCTGGGCATTTTAGAAGCGAGGGAGGAAGAACTCGCCAACAATAGGAGGCGGAAACGACGCCGTCTCGCTCGCTGGGTAATTACGCGGCCTATCGGCAACACTGGGCCCACTCACACCGGGTCTCCCAGTCCTTTAATCAGCGATGCTTGTACCCCATTTAAACCAAACAAGATAAAAAACAACAACCCCATATCCCCGCAACCAAACACCCGCGCCCACCCACCCAAAATGGAATCTCAATCGCTCCAACCCAAACAGATCTTCATCTTATCGGGCCAGAGCAATATGGCCGGCCGCGGTGGCGTTTTCAGAGACCACCATCACCACCAGCACTGGGACCGCGTCGTTCCGAACGAGTGCGGCCCCCATCCATCCATCCATCGCCTCAGCGCGCATCTCCAGTGGGAGCCCGCGCACGAGCCGCTTCACGCCGACATCGATGCCAAGGTCTGCGGCGTGGGGCCGGGGATGGCGTTCGCGAACGGGGTGAGGGAGCGCGTGGGGGTGGTGGGGCTCGTGCCGTGCGCGGTGGGCGGGACGGCGATCAAGGAGTGGGCGCGTGGAGAGCACTTGTACGAGAGTATGGTGAAGAGGGCGAGAGCGAGCGTGAAGGGTGGGGGTGAGATGAAAGGATTGTTGTGGTACCAAGGGGAGAGTGACACGTCGACGCAGCATGATGCTGATGCGTACCACGGGAACATGGTGAAGCTCATTGAGAATGTGCGCGAGGATCTTGGCTTGCCTTCGCTTCCTATTATCCAGGTGGCTATTGGGTCTGGGGATGCGAAGTATATAGAGAAAGTGAGGGAGGCCCAATTGGGAATGAATGTTCCAAATGTGGTTTGTGTGGATGCAAAGGGGTTGGAGCTCAAAGATGATCATCTGCACCTGACCACCAAGGCCCAGGTTCAATTGGGTCACATGTTGGCTGATGCTTACATCAAACACTTTGTATCATCAGTAGCGAATGCTCATCCTGCCCTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

364

Amino Acids

40.12

Weight (kDa)

9.12

Isoelectric Point (pI)

49.72

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 2 cut(s) 21, 747
AccB1I GGYRCC 2 cut(s) 21, 747
AccI GTMKAC 1 cut(s) 770
AclWI GGATC 1 cut(s) 843
AcoI YGGCCR 2 cut(s) 393, 397
AcyI GRCGYC 2 cut(s) 16, 163
AfaI GTAC 5 cut(s) 23, 256, 680, 749, 794
AfiI CCNNNNNNNGG 3 cut(s) 97, 147, 439
AflIII ACRYGT 2 cut(s) 765, 1026
AgsI TTSAA 2 cut(s) 32, 1016
AjiI CACGTC 1 cut(s) 768
AjnI CCWGG 2 cut(s) 864, 1008
AjuI GAANNNNNNNTTGG 2 cut(s) 350, 382
AloI GAACNNNNNNTCC 2 cut(s) 918, 950
AluBI AGCT 2 cut(s) 814, 973
AluI AGCT 2 cut(s) 814, 973
Alw21I GWGCWC 2 cut(s) 675, 975
Alw26I GTCTC 4 cut(s) 70, 173, 231, 411
AlwI GGATC 1 cut(s) 843
AoxI GGCC 9 cut(s) 191, 209, 379, 393, 397, 466, 566, 915, 1005
ApaI GGGCCC 1 cut(s) 213
ApeKI GCWGC 1 cut(s) 775
Asp718I GGTACC 2 cut(s) 21, 747
AspLEI GCGC 8 cut(s) 320, 497, 499, 520, 603, 632, 664, 831
AspS9I GGNCC 8 cut(s) 209, 210, 379, 442, 467, 566, 916, 1006
AsuC2I CCSGG 2 cut(s) 223, 570
AsuHPI GGTGA 5 cut(s) 419, 604, 703, 737, 820
AvaII GGWCC 1 cut(s) 442
BaeGI GKGCMC 1 cut(s) 213
BaeI ACNNNNGTAYC 1 cut(s) 38
BanI GGYRCC 2 cut(s) 21, 747
BanII GRGCYC 4 cut(s) 213, 516, 621, 975
BauI CACGAG 2 cut(s) 521, 620
Bbv12I GWGCWC 2 cut(s) 675, 975
BbvCI CCTCAGC 1 cut(s) 491
BbvI GCAGC 1 cut(s) 787
BccI CCATC 6 cut(s) 432, 480, 484, 488, 492, 568
BceAI ACGGC 3 cut(s) 150, 610, 660
BcgI CGANNNNNNTGC 2 cut(s) 527, 561
BciT130I CCWGG 2 cut(s) 866, 1010
BclI TGATCA 1 cut(s) 982
BcnI CCSGG 2 cut(s) 223, 570
BcoDI GTCTC 4 cut(s) 70, 173, 231, 411
BglI GCCNNNNNGGC 1 cut(s) 405
BglII AGATCT 1 cut(s) 363
BisI GCNGC 6 cut(s) 191, 400, 466, 527, 559, 776
BlsI GCNGC 6 cut(s) 192, 401, 467, 528, 560, 777
Bme1390I CCNGG 4 cut(s) 223, 570, 866, 1010
Bme18I GGWCC 1 cut(s) 442
BmgBI CACGTC 1 cut(s) 768
BmgT120I GGNCC 8 cut(s) 209, 210, 379, 442, 467, 566, 916, 1006
BmiI GGNNCC 7 cut(s) 23, 211, 443, 469, 513, 567, 749
BmrFI CCNGG 4 cut(s) 223, 570, 866, 1010
BmrI ACTGGG 3 cut(s) 216, 225, 448
BmsI GCATC 8 cut(s) 238, 508, 535, 772, 778, 877, 946, 1027
BmuI ACTGGG 3 cut(s) 216, 225, 448
BpmI CTGGAG 1 cut(s) 488
Bpu10I CCTNAGC 1 cut(s) 491
BpuMI CCSGG 2 cut(s) 223, 570
Bsa29I ATCGAT 1 cut(s) 543
BsaBI GATNNNNATC 2 cut(s) 368, 984
BsaHI GRCGYC 2 cut(s) 16, 163
BsaI GGTCTC 2 cut(s) 231, 411
BsaJI CCNNGG 8 cut(s) 96, 400, 549, 569, 751, 796, 1002, 1008
BsaXI ACNNNNNCTCC 2 cut(s) 211, 241
Bsc4I CCNNNNNNNGG 3 cut(s) 97, 147, 439
Bse118I RCCGGY 2 cut(s) 18, 395
Bse1I ACTGG 4 cut(s) 211, 231, 443, 505
Bse8I GATNNNNATC 2 cut(s) 368, 984
BseBI CCWGG 2 cut(s) 866, 1010
BseCI ATCGAT 1 cut(s) 543
BseDI CCNNGG 8 cut(s) 96, 400, 549, 569, 751, 796, 1002, 1008
BseGI GGATG 7 cut(s) 472, 476, 480, 579, 892, 961, 1078
BseJI GATNNNNATC 2 cut(s) 368, 984
BseLI CCNNNNNNNGG 3 cut(s) 97, 147, 439
BseMII CTCAG 1 cut(s) 505
BseNI ACTGG 4 cut(s) 211, 231, 443, 505
BsePI GCGCGC 1 cut(s) 495
BseSI GKGCMC 1 cut(s) 213
BseX3I CGGCCG 1 cut(s) 397
BseXI GCAGC 1 cut(s) 787
BseYI CCCAGC 3 cut(s) 91, 106, 177
BsgI GTGCAG 1 cut(s) 974
Bsh1285I CGRYCG 1 cut(s) 400
BshFI GGCC 9 cut(s) 193, 211, 381, 395, 399, 468, 568, 917, 1007
BshNI GGYRCC 2 cut(s) 21, 747
BshVI ATCGAT 1 cut(s) 543
BsiEI CGRYCG 1 cut(s) 400
BsiHKAI GWGCWC 2 cut(s) 675, 975
BsiSI CCGG 4 cut(s) 19, 222, 396, 569
BslFI GGGAC 2 cut(s) 455, 655
BslI CCNNNNNNNGG 3 cut(s) 97, 147, 439
BsmAI GTCTC 4 cut(s) 70, 173, 231, 411
BsmBI CGTCTC 1 cut(s) 173
BsmFI GGGAC 2 cut(s) 455, 655
BsmI GAATGC 1 cut(s) 1078
BsnI GGCC 9 cut(s) 193, 211, 381, 395, 399, 468, 568, 917, 1007
Bso31I GGTCTC 2 cut(s) 231, 411
Bsp120I GGGCCC 1 cut(s) 209
Bsp1286I GDGCHC 5 cut(s) 213, 516, 621, 675, 975
Bsp143I GATC 4 cut(s) 363, 648, 835, 982
Bsp68I TCGCGA 1 cut(s) 584
BspANI GGCC 9 cut(s) 193, 211, 381, 395, 399, 468, 568, 917, 1007
BspCNI CTCAG 1 cut(s) 504
BspDI ATCGAT 1 cut(s) 543
BspLI GGNNCC 7 cut(s) 23, 211, 443, 469, 513, 567, 749
BspPI GGATC 1 cut(s) 843
BspT107I GGYRCC 2 cut(s) 21, 747
BspTNI GGTCTC 2 cut(s) 231, 411
BsrFI RCCGGY 2 cut(s) 18, 395
BsrI ACTGG 4 cut(s) 211, 231, 443, 505
BssAI RCCGGY 2 cut(s) 18, 395
BssECI CCNNGG 8 cut(s) 96, 400, 549, 569, 751, 796, 1002, 1008
BssHII GCGCGC 1 cut(s) 495
BssMI GATC 4 cut(s) 363, 648, 835, 982
BssNI GRCGYC 2 cut(s) 16, 163
BssSI CACGAG 2 cut(s) 521, 620
BssT1I CCWWGG 3 cut(s) 549, 751, 1002
Bst2BI CACGAG 2 cut(s) 521, 620
Bst2UI CCWGG 2 cut(s) 866, 1010
Bst6I CTCTTC 1 cut(s) 689
BstACI GRCGYC 2 cut(s) 16, 163
BstC8I GCNNGC 6 cut(s) 175, 397, 497, 516, 709, 845
BstDEI CTNAG 1 cut(s) 491
BstDSI CCRYGG 3 cut(s) 96, 400, 796
BstF5I GGATG 7 cut(s) 472, 476, 480, 579, 892, 961, 1078
BstHHI GCGC 8 cut(s) 320, 497, 499, 520, 603, 632, 664, 831
BstKTI GATC 4 cut(s) 366, 651, 838, 985
BstMAI GTCTC 4 cut(s) 70, 173, 231, 411
BstMBI GATC 4 cut(s) 363, 648, 835, 982
BstMCI CGRYCG 1 cut(s) 400
BstMWI GCNNNNNNNGC 6 cut(s) 10, 405, 526, 636, 670, 1082
BstNI CCWGG 2 cut(s) 866, 1010
BstNSI RCATGY 1 cut(s) 1030
BstSCI CCNGG 4 cut(s) 221, 568, 864, 1008
BstSLI GKGCMC 1 cut(s) 213
BstV1I GCAGC 1 cut(s) 787
BstX2I RGATCY 2 cut(s) 363, 835
BstYI RGATCY 2 cut(s) 363, 835
BstZI CGGCCG 1 cut(s) 397
Bsu15I ATCGAT 1 cut(s) 543
BsuRI GGCC 9 cut(s) 193, 211, 381, 395, 399, 468, 568, 917, 1007
BsuTUI ATCGAT 1 cut(s) 543
BtgI CCRYGG 3 cut(s) 96, 400, 796
BtgZI GCGATG 2 cut(s) 261, 470
BtrI CACGTC 1 cut(s) 768
BtsCI GGATG 7 cut(s) 472, 476, 480, 579, 892, 961, 1078
BtsIMutI CAGTG 3 cut(s) 204, 436, 512
BtuMI TCGCGA 1 cut(s) 584
Cac8I GCNNGC 6 cut(s) 175, 397, 497, 516, 709, 845
CfoI GCGC 8 cut(s) 320, 497, 499, 520, 603, 632, 664, 831
Cfr10I RCCGGY 2 cut(s) 18, 395
Cfr13I GGNCC 8 cut(s) 209, 210, 379, 442, 467, 566, 916, 1006
Cfr42I CCGCGG 1 cut(s) 403
ClaI ATCGAT 1 cut(s) 543
CseI GACGC 4 cut(s) 24, 171, 436, 781
Csp6I GTAC 5 cut(s) 22, 255, 679, 748, 793
CviAII CATG 3 cut(s) 779, 805, 1027
CviQI GTAC 5 cut(s) 22, 255, 679, 748, 793
DdeI CTNAG 1 cut(s) 491
DpnI GATC 4 cut(s) 365, 650, 837, 984
DpnII GATC 4 cut(s) 363, 648, 835, 982
DraI TTTAAA 1 cut(s) 265
EaeI YGGCCR 2 cut(s) 393, 397
EagI CGGCCG 1 cut(s) 397
Eam1104I CTCTTC 1 cut(s) 689
EarI CTCTTC 1 cut(s) 689
EciI GGCGGA 1 cut(s) 169
Ecl136II GAGCTC 1 cut(s) 973
EclXI CGGCCG 1 cut(s) 397
Eco130I CCWWGG 3 cut(s) 549, 751, 1002
Eco24I GRGCYC 4 cut(s) 213, 516, 621, 975
Eco31I GGTCTC 2 cut(s) 231, 411
Eco47I GGWCC 1 cut(s) 442
Eco52I CGGCCG 1 cut(s) 397
Eco53kI GAGCTC 1 cut(s) 973
EcoICRI GAGCTC 1 cut(s) 973
EcoRII CCWGG 2 cut(s) 864, 1008
EcoT14I CCWWGG 3 cut(s) 549, 751, 1002
EcoT38I GRGCYC 4 cut(s) 213, 516, 621, 975
ErhI CCWWGG 3 cut(s) 549, 751, 1002
Esp3I CGTCTC 1 cut(s) 173
FaeI CATG 3 cut(s) 782, 808, 1030
FaiI YATR 8 cut(s) 296, 392, 689, 780, 806, 897, 899, 1028
FaqI GGGAC 2 cut(s) 455, 655
FatI CATG 3 cut(s) 778, 804, 1026
FauI CCCGC 5 cut(s) 82, 309, 323, 523, 632
FbaI TGATCA 1 cut(s) 982
FblI GTMKAC 1 cut(s) 770
Fnu4HI GCNGC 6 cut(s) 191, 400, 466, 527, 559, 776
FokI GGATG 7 cut(s) 459, 463, 467, 586, 899, 968, 1065
FriOI GRGCYC 4 cut(s) 213, 516, 621, 975
FseI GGCCGGCC 1 cut(s) 399
Fsp4HI GCNGC 6 cut(s) 191, 400, 466, 527, 559, 776
GlaI GCGC 8 cut(s) 319, 496, 498, 519, 602, 631, 663, 830
GluI GCNGC 6 cut(s) 191, 400, 466, 527, 559, 776
GsaI CCCAGC 3 cut(s) 95, 110, 181
GsuI CTGGAG 1 cut(s) 488
HaeIII GGCC 9 cut(s) 193, 211, 381, 395, 399, 468, 568, 917, 1007
HapII CCGG 4 cut(s) 19, 222, 396, 569
HgaI GACGC 4 cut(s) 24, 171, 436, 781
HhaI GCGC 8 cut(s) 320, 497, 499, 520, 603, 632, 664, 831
Hin1I GRCGYC 2 cut(s) 16, 163
Hin1II CATG 3 cut(s) 782, 808, 1030
Hin6I GCGC 8 cut(s) 318, 495, 497, 518, 601, 630, 662, 829
HinP1I GCGC 8 cut(s) 318, 495, 497, 518, 601, 630, 662, 829
HincII GTYRAC 1 cut(s) 771
HindII GTYRAC 1 cut(s) 771
HinfI GANTC 2 cut(s) 101, 338
HpaII CCGG 4 cut(s) 19, 222, 396, 569
HphI GGTGA 5 cut(s) 419, 604, 703, 737, 820
Hpy166II GTNNAC 1 cut(s) 771
Hpy188I TCNGA 2 cut(s) 416, 456
Hpy188III TCNNGA 1 cut(s) 583
Hpy8I GTNNAC 1 cut(s) 771
Hpy99I CGWCG 5 cut(s) 18, 165, 452, 772, 775
HpyAV CCTTC 2 cut(s) 709, 858
HpyCH4IV ACGT 1 cut(s) 767
HpyCH4V TGCA 2 cut(s) 959, 991
HpyF10VI GCNNNNNNNGC 6 cut(s) 10, 405, 526, 636, 670, 1082
HpyF3I CTNAG 1 cut(s) 491
HpySE526I ACGT 1 cut(s) 767
Hsp92I GRCGYC 2 cut(s) 16, 163
Hsp92II CATG 3 cut(s) 782, 808, 1030
HspAI GCGC 8 cut(s) 318, 495, 497, 518, 601, 630, 662, 829
KpnI GGTACC 2 cut(s) 25, 751
KroI GCCGGC 1 cut(s) 395
KroNI GCCGGC 1 cut(s) 397
Ksp22I TGATCA 1 cut(s) 982
KspI CCGCGG 1 cut(s) 403
Kzo9I GATC 4 cut(s) 363, 648, 835, 982
LmnI GCTCC 4 cut(s) 354, 511, 598, 970
Lsp1109I GCAGC 1 cut(s) 787
LweI GCATC 8 cut(s) 238, 508, 535, 772, 778, 877, 946, 1027
MaeII ACGT 1 cut(s) 767
MaeIII GTNAC 2 cut(s) 761, 1022
MalI GATC 4 cut(s) 365, 650, 837, 984
MboI GATC 4 cut(s) 363, 648, 835, 982
MboII GAAGA 4 cut(s) 71, 143, 358, 706
MfeI CAATTG 2 cut(s) 920, 1016
MflI RGATCY 2 cut(s) 363, 835
MhlI GDGCHC 5 cut(s) 213, 516, 621, 675, 975
MluCI AATT 3 cut(s) 183, 920, 1016
MmeI TCCRAC 2 cut(s) 376, 948
MroNI GCCGGC 1 cut(s) 395
MseI TTAA 3 cut(s) 239, 264, 1090
MspA1I CMGCKG 1 cut(s) 402
MspI CCGG 4 cut(s) 19, 222, 396, 569
MspR9I CCNGG 4 cut(s) 223, 570, 866, 1010
MunI CAATTG 2 cut(s) 920, 1016
Mva1269I GAATGC 1 cut(s) 1078
MvaI CCWGG 2 cut(s) 866, 1010
MwoI GCNNNNNNNGC 6 cut(s) 10, 405, 526, 636, 670, 1082
NaeI GCCGGC 1 cut(s) 397
NciI CCSGG 2 cut(s) 223, 570
NdeII GATC 4 cut(s) 363, 648, 835, 982
NgoMIV GCCGGC 1 cut(s) 395
NlaIII CATG 3 cut(s) 782, 808, 1030
NlaIV GGNNCC 7 cut(s) 23, 211, 443, 469, 513, 567, 749
NmuCI GTSAC 2 cut(s) 761, 1022
NruI TCGCGA 1 cut(s) 584
NspI RCATGY 1 cut(s) 1030
PauI GCGCGC 1 cut(s) 495
PciI ACATGT 1 cut(s) 1026
PcsI WCGNNNNNNNCGW 2 cut(s) 456, 540
PctI GAATGC 1 cut(s) 1078
PdiI GCCGGC 1 cut(s) 397
PfeI GAWTC 2 cut(s) 101, 338
PflFI GACNNNGTC 2 cut(s) 165, 446
PkrI GCNGC 6 cut(s) 192, 401, 467, 528, 560, 777
PscI ACATGT 1 cut(s) 1026
Psp124BI GAGCTC 1 cut(s) 975
Psp6I CCWGG 2 cut(s) 864, 1008
PspFI CCCAGC 3 cut(s) 91, 106, 177
PspGI CCWGG 2 cut(s) 864, 1008
PspN4I GGNNCC 7 cut(s) 23, 211, 443, 469, 513, 567, 749
PspOMI GGGCCC 1 cut(s) 209
PspPI GGNCC 8 cut(s) 209, 210, 379, 442, 467, 566, 916, 1006
PsuI RGATCY 2 cut(s) 363, 835
PsyI GACNNNGTC 2 cut(s) 165, 446
PteI GCGCGC 1 cut(s) 495
RigI GGCCGGCC 1 cut(s) 399
RruI TCGCGA 1 cut(s) 584
RsaI GTAC 5 cut(s) 23, 256, 680, 749, 794
RsaNI GTAC 5 cut(s) 22, 255, 679, 748, 793
SacI GAGCTC 1 cut(s) 975
SacII CCGCGG 1 cut(s) 403
SalI GTCGAC 1 cut(s) 769
SaqAI TTAA 3 cut(s) 239, 264, 1090
SatI GCNGC 6 cut(s) 191, 400, 466, 527, 559, 776
Sau3AI GATC 4 cut(s) 363, 648, 835, 982
Sau96I GGNCC 8 cut(s) 209, 210, 379, 442, 467, 566, 916, 1006
ScrFI CCNGG 4 cut(s) 223, 570, 866, 1010
SduI GDGCHC 5 cut(s) 213, 516, 621, 675, 975
SetI ASST 8 cut(s) 27, 555, 770, 816, 870, 975, 996, 1014
SfaNI GCATC 8 cut(s) 238, 508, 535, 772, 778, 877, 946, 1027
Sfr303I CCGCGG 1 cut(s) 403
SgrBI CCGCGG 1 cut(s) 403
SgrDI CGTCGACG 1 cut(s) 769
SinI GGWCC 1 cut(s) 442
Sse9I AATT 3 cut(s) 183, 920, 1016
SstI GAGCTC 1 cut(s) 975
StyD4I CCNGG 4 cut(s) 221, 568, 864, 1008
StyI CCWWGG 3 cut(s) 549, 751, 1002
TaiI ACGT 1 cut(s) 770
TaqI TCGA 2 cut(s) 543, 770
TasI AATT 3 cut(s) 183, 920, 1016
TauI GCSGC 5 cut(s) 193, 402, 468, 529, 561
TfiI GAWTC 2 cut(s) 101, 338
Tru1I TTAA 3 cut(s) 239, 264, 1090
Tru9I TTAA 3 cut(s) 239, 264, 1090
TscAI CASTG 3 cut(s) 211, 443, 512
TseFI GTSAC 2 cut(s) 761, 1022
TseI GCWGC 1 cut(s) 775
Tsp45I GTSAC 2 cut(s) 761, 1022
TspDTI ATGAA 3 cut(s) 358, 746, 944
TspGWI ACGGA 1 cut(s) 113
TspRI CASTG 3 cut(s) 211, 443, 512
Tth111I GACNNNGTC 2 cut(s) 165, 446
VpaK11BI GGWCC 1 cut(s) 442
XceI RCATGY 1 cut(s) 1030
XcmI CCANNNNNNNNNTGG 2 cut(s) 103, 872
XmiI GTMKAC 1 cut(s) 770
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.