Belongs to the disease resistance NB-LRR family
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| prunus_persica | Prupe.4G038400_v2.0.a1 Prupe.4G038500_v2.0.a1 Prupe.4G038500_v2.0.a1 Prupe.4G038500_v2.0.a1 Prupe.4G038500_v2.0.a1 Prupe.4G038500_v2.0.a1 Prupe.4G109000_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr5g0006451 RchiOBHm_Chr5g0006641 |
| rosa_laevigata | RLG00000010123 RLG00000031358 RLG00000031359 RLG00000031409 RLG00000031412 RLG00000031414 RLG00000031415 RLG00000031416 |
| rosa_multiflora | Rmu_co8352783.1_g000001 Rmu_sc0001972.1_g000012 Rmu_sc0001972.1_g000020 Rmu_sc0001972.1_g000021 Rmu_sc0002972.1_g000002 Rmu_sc0008991.1_g000009 Rmu_sc0031143.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00069360 |
| rosa_rugosa | Rorug04G0423500 Rorug04G0423600 Rorug04G0423700 |
| rosa_samantha | Rh5AG051300 Rh5AG264900 Rh5AG265100 Rh5BG050100 Rh5BG050300 Rh5BG050400 Rh5CG058400 Rh5CG058900 Rh5CG079700 Rh5DG049500 |
| rosa_wichuraiana | Rw5G005070 Rw5G005310 Rw5G005320 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 2 cut(s) | 1304, 1649 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 407, 876 |
| AciI | CCGC | 2 cut(s) | 1164, 1288 |
| AclI | AACGTT | 2 cut(s) | 584, 767 |
| AclWI | GGATC | 3 cut(s) | 8, 174, 730 |
| AcsI | RAATTY | 1 cut(s) | 1537 |
| AdeI | CACNNNGTG | 1 cut(s) | 1228 |
| AfaI | GTAC | 3 cut(s) | 86, 724, 1412 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 163, 308, 407, 876 |
| AflIII | ACRYGT | 2 cut(s) | 286, 960 |
| AgsI | TTSAA | 9 cut(s) | 107, 529, 794, 895, 904, 1021, 1042, 1624, 1666 |
| AjnI | CCWGG | 3 cut(s) | 301, 406, 1342 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 61, 93, 99, 131 |
| AleI | CACNNNNGTG | 1 cut(s) | 70 |
| AluBI | AGCT | 7 cut(s) | 365, 571, 785, 824, 1313, 1364, 1375 |
| AluI | AGCT | 7 cut(s) | 365, 571, 785, 824, 1313, 1364, 1375 |
| Alw21I | GWGCWC | 3 cut(s) | 462, 1222, 1496 |
| Alw26I | GTCTC | 1 cut(s) | 978 |
| Alw44I | GTGCAC | 1 cut(s) | 1492 |
| AlwI | GGATC | 3 cut(s) | 8, 174, 730 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 745 |
| Ama87I | CYCGRG | 1 cut(s) | 418 |
| AoxI | GGCC | 2 cut(s) | 375, 1261 |
| ApaLI | GTGCAC | 1 cut(s) | 1492 |
| ApeKI | GCWGC | 3 cut(s) | 198, 201, 666 |
| ApoI | RAATTY | 1 cut(s) | 1537 |
| AseI | ATTAAT | 1 cut(s) | 48 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 617, 1061, 1700 |
| AspLEI | GCGC | 3 cut(s) | 763, 1305, 1650 |
| AspS9I | GGNCC | 1 cut(s) | 424 |
| AsuHPI | GGTGA | 2 cut(s) | 378, 460 |
| AvaI | CYCGRG | 1 cut(s) | 418 |
| AvaII | GGWCC | 1 cut(s) | 424 |
| BaeGI | GKGCMC | 1 cut(s) | 1496 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 714, 747 |
| BbsI | GAAGAC | 1 cut(s) | 320 |
| Bbv12I | GWGCWC | 3 cut(s) | 462, 1222, 1496 |
| BbvI | GCAGC | 3 cut(s) | 210, 213, 653 |
| BccI | CCATC | 4 cut(s) | 878, 983, 1338, 1526 |
| BceAI | ACGGC | 2 cut(s) | 203, 1650 |
| BciT130I | CCWGG | 3 cut(s) | 303, 408, 1344 |
| BclI | TGATCA | 3 cut(s) | 591, 1143, 1293 |
| BcoDI | GTCTC | 1 cut(s) | 978 |
| BfaI | CTAG | 1 cut(s) | 1314 |
| BfmI | CTRYAG | 3 cut(s) | 330, 453, 1505 |
| BisI | GCNGC | 3 cut(s) | 199, 202, 667 |
| BlsI | GCNGC | 3 cut(s) | 200, 203, 668 |
| BmcAI | AGTACT | 1 cut(s) | 1412 |
| Bme1390I | CCNGG | 3 cut(s) | 303, 408, 1344 |
| Bme18I | GGWCC | 1 cut(s) | 424 |
| BmeT110I | CYCGRG | 1 cut(s) | 418 |
| BmgT120I | GGNCC | 1 cut(s) | 424 |
| BmiI | GGNNCC | 1 cut(s) | 425 |
| BmrFI | CCNGG | 3 cut(s) | 303, 408, 1344 |
| BmsI | GCATC | 3 cut(s) | 118, 1024, 1290 |
| BpiI | GAAGAC | 1 cut(s) | 320 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1418, 1450 |
| BpmI | CTGGAG | 3 cut(s) | 840, 960, 1440 |
| BpuEI | CTTGAG | 2 cut(s) | 611, 1233 |
| BsaAI | YACGTR | 1 cut(s) | 287 |
| BsaBI | GATNNNNATC | 2 cut(s) | 12, 677 |
| BsaJI | CCNNGG | 3 cut(s) | 419, 654, 1342 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 163, 308, 407, 876 |
| Bse1I | ACTGG | 3 cut(s) | 564, 644, 823 |
| Bse3DI | GCAATG | 1 cut(s) | 1159 |
| Bse8I | GATNNNNATC | 2 cut(s) | 12, 677 |
| BseBI | CCWGG | 3 cut(s) | 303, 408, 1344 |
| BseDI | CCNNGG | 3 cut(s) | 419, 654, 1342 |
| BseGI | GGATG | 4 cut(s) | 13, 133, 476, 994 |
| BseJI | GATNNNNATC | 2 cut(s) | 12, 677 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 163, 308, 407, 876 |
| BseMI | GCAATG | 1 cut(s) | 1159 |
| BseMII | CTCAG | 3 cut(s) | 182, 1595, 1683 |
| BseNI | ACTGG | 3 cut(s) | 564, 644, 823 |
| BseSI | GKGCMC | 1 cut(s) | 1496 |
| BseXI | GCAGC | 3 cut(s) | 210, 213, 653 |
| BseYI | CCCAGC | 1 cut(s) | 92 |
| BshFI | GGCC | 2 cut(s) | 377, 1263 |
| BsiHKAI | GWGCWC | 3 cut(s) | 462, 1222, 1496 |
| BsiHKCI | CYCGRG | 1 cut(s) | 418 |
| BslFI | GGGAC | 5 cut(s) | 198, 437, 690, 1197, 1641 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 163, 308, 407, 876 |
| BsmAI | GTCTC | 1 cut(s) | 978 |
| BsmFI | GGGAC | 5 cut(s) | 198, 437, 690, 1197, 1641 |
| BsmI | GAATGC | 2 cut(s) | 303, 952 |
| BsnI | GGCC | 2 cut(s) | 377, 1263 |
| BsoBI | CYCGRG | 1 cut(s) | 418 |
| Bsp1286I | GDGCHC | 3 cut(s) | 462, 1222, 1496 |
| BspACI | CCGC | 2 cut(s) | 1164, 1288 |
| BspANI | GGCC | 2 cut(s) | 377, 1263 |
| BspCNI | CTCAG | 3 cut(s) | 183, 1594, 1684 |
| BspLI | GGNNCC | 1 cut(s) | 425 |
| BspMAI | CTGCAG | 2 cut(s) | 334, 1509 |
| BspPI | GGATC | 3 cut(s) | 8, 174, 730 |
| BsrDI | GCAATG | 1 cut(s) | 1159 |
| BsrI | ACTGG | 3 cut(s) | 564, 644, 823 |
| BssECI | CCNNGG | 3 cut(s) | 419, 654, 1342 |
| BssT1I | CCWWGG | 1 cut(s) | 654 |
| Bst2UI | CCWGG | 3 cut(s) | 303, 408, 1344 |
| Bst4CI | ACNGT | 6 cut(s) | 84, 123, 390, 454, 1073, 1389 |
| Bst6I | CTCTTC | 1 cut(s) | 1706 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 947 |
| BstBAI | YACGTR | 1 cut(s) | 287 |
| BstC8I | GCNNGC | 5 cut(s) | 367, 538, 787, 882, 1366 |
| BstDEI | CTNAG | 4 cut(s) | 191, 1309, 1581, 1692 |
| BstF5I | GGATG | 4 cut(s) | 13, 133, 476, 994 |
| BstHHI | GCGC | 3 cut(s) | 763, 1305, 1650 |
| BstMAI | GTCTC | 1 cut(s) | 978 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 947, 1287 |
| BstNI | CCWGG | 3 cut(s) | 303, 408, 1344 |
| BstNSI | RCATGY | 1 cut(s) | 964 |
| BstSCI | CCNGG | 3 cut(s) | 301, 406, 1342 |
| BstSFI | CTRYAG | 3 cut(s) | 330, 453, 1505 |
| BstSLI | GKGCMC | 1 cut(s) | 1496 |
| BstV1I | GCAGC | 3 cut(s) | 210, 213, 653 |
| BstV2I | GAAGAC | 1 cut(s) | 320 |
| BstX2I | RGATCY | 1 cut(s) | 735 |
| BstYI | RGATCY | 1 cut(s) | 735 |
| BsuRI | GGCC | 2 cut(s) | 377, 1263 |
| BtsCI | GGATG | 4 cut(s) | 13, 133, 476, 994 |
| BtsI | GCAGTG | 1 cut(s) | 138 |
| BtsIMutI | CAGTG | 3 cut(s) | 138, 557, 651 |
| Cac8I | GCNNGC | 5 cut(s) | 367, 538, 787, 882, 1366 |
| CaiI | CAGNNNCTG | 1 cut(s) | 745 |
| CfoI | GCGC | 3 cut(s) | 763, 1305, 1650 |
| Cfr13I | GGNCC | 1 cut(s) | 424 |
| Csp6I | GTAC | 3 cut(s) | 85, 723, 1411 |
| CviAII | CATG | 6 cut(s) | 293, 923, 942, 961, 994, 1291 |
| CviQI | GTAC | 3 cut(s) | 85, 723, 1411 |
| DdeI | CTNAG | 4 cut(s) | 191, 1309, 1581, 1692 |
| DraIII | CACNNNGTG | 1 cut(s) | 1228 |
| Eam1104I | CTCTTC | 1 cut(s) | 1706 |
| EarI | CTCTTC | 1 cut(s) | 1706 |
| Eco130I | CCWWGG | 1 cut(s) | 654 |
| Eco147I | AGGCCT | 1 cut(s) | 1263 |
| Eco32I | GATATC | 1 cut(s) | 982 |
| Eco47I | GGWCC | 1 cut(s) | 424 |
| Eco88I | CYCGRG | 1 cut(s) | 418 |
| EcoRII | CCWGG | 3 cut(s) | 301, 406, 1342 |
| EcoRV | GATATC | 1 cut(s) | 982 |
| EcoT14I | CCWWGG | 1 cut(s) | 654 |
| ErhI | CCWWGG | 1 cut(s) | 654 |
| FaeI | CATG | 6 cut(s) | 296, 926, 945, 964, 997, 1294 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1251, 1283 |
| FaqI | GGGAC | 5 cut(s) | 198, 437, 690, 1197, 1641 |
| FatI | CATG | 6 cut(s) | 292, 922, 941, 960, 993, 1290 |
| FauNDI | CATATG | 1 cut(s) | 727 |
| FbaI | TGATCA | 3 cut(s) | 591, 1143, 1293 |
| Fnu4HI | GCNGC | 3 cut(s) | 199, 202, 667 |
| FokI | GGATG | 4 cut(s) | 20, 140, 463, 1001 |
| Fsp4HI | GCNGC | 3 cut(s) | 199, 202, 667 |
| FspBI | CTAG | 1 cut(s) | 1314 |
| FspI | TGCGCA | 2 cut(s) | 1304, 1649 |
| GlaI | GCGC | 3 cut(s) | 762, 1304, 1649 |
| GluI | GCNGC | 3 cut(s) | 199, 202, 667 |
| GsaI | CCCAGC | 1 cut(s) | 96 |
| GsuI | CTGGAG | 3 cut(s) | 840, 960, 1440 |
| HaeIII | GGCC | 2 cut(s) | 377, 1263 |
| HhaI | GCGC | 3 cut(s) | 763, 1305, 1650 |
| Hin1II | CATG | 6 cut(s) | 296, 926, 945, 964, 997, 1294 |
| Hin6I | GCGC | 3 cut(s) | 761, 1303, 1648 |
| HinP1I | GCGC | 3 cut(s) | 761, 1303, 1648 |
| HincII | GTYRAC | 3 cut(s) | 337, 582, 928 |
| HindII | GTYRAC | 3 cut(s) | 337, 582, 928 |
| HindIII | AAGCTT | 2 cut(s) | 363, 1373 |
| HinfI | GANTC | 4 cut(s) | 473, 640, 971, 1453 |
| HpaI | GTTAAC | 1 cut(s) | 582 |
| HphI | GGTGA | 2 cut(s) | 378, 460 |
| Hpy166II | GTNNAC | 5 cut(s) | 337, 393, 582, 928, 1494 |
| Hpy188I | TCNGA | 7 cut(s) | 279, 591, 716, 1098, 1584, 1693, 1719 |
| Hpy8I | GTNNAC | 5 cut(s) | 337, 393, 582, 928, 1494 |
| HpyAV | CCTTC | 5 cut(s) | 262, 458, 1036, 1274, 1610 |
| HpyCH4III | ACNGT | 6 cut(s) | 84, 123, 390, 454, 1073, 1389 |
| HpyCH4IV | ACGT | 5 cut(s) | 286, 395, 584, 767, 933 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 947, 1287 |
| HpyF3I | CTNAG | 4 cut(s) | 191, 1309, 1581, 1692 |
| HpySE526I | ACGT | 5 cut(s) | 286, 395, 584, 767, 933 |
| Hsp92II | CATG | 6 cut(s) | 296, 926, 945, 964, 997, 1294 |
| HspAI | GCGC | 3 cut(s) | 761, 1303, 1648 |
| Ksp22I | TGATCA | 3 cut(s) | 591, 1143, 1293 |
| KspAI | GTTAAC | 1 cut(s) | 582 |
| LmnI | GCTCC | 1 cut(s) | 821 |
| Lsp1109I | GCAGC | 3 cut(s) | 210, 213, 653 |
| LweI | GCATC | 3 cut(s) | 118, 1024, 1290 |
| MaeI | CTAG | 1 cut(s) | 1314 |
| MaeII | ACGT | 5 cut(s) | 286, 395, 584, 767, 933 |
| MaeIII | GTNAC | 5 cut(s) | 41, 259, 396, 410, 448 |
| MfeI | CAATTG | 1 cut(s) | 1651 |
| MflI | RGATCY | 1 cut(s) | 735 |
| MhlI | GDGCHC | 3 cut(s) | 462, 1222, 1496 |
| MlyI | GAGTC | 1 cut(s) | 980 |
| MmeI | TCCRAC | 1 cut(s) | 105 |
| MroXI | GAANNNNTTC | 3 cut(s) | 617, 1061, 1700 |
| MseI | TTAA | 9 cut(s) | 48, 249, 581, 632, 732, 806, 965, 1011, 1275 |
| MslI | CAYNNNNRTG | 3 cut(s) | 70, 446, 680 |
| MspR9I | CCNGG | 3 cut(s) | 303, 408, 1344 |
| MunI | CAATTG | 1 cut(s) | 1651 |
| Mva1269I | GAATGC | 2 cut(s) | 303, 952 |
| MvaI | CCWGG | 3 cut(s) | 303, 408, 1344 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 947, 1287 |
| NdeI | CATATG | 1 cut(s) | 727 |
| NlaIII | CATG | 6 cut(s) | 296, 926, 945, 964, 997, 1294 |
| NlaIV | GGNNCC | 1 cut(s) | 425 |
| NmeAIII | GCCGAG | 1 cut(s) | 774 |
| NmuCI | GTSAC | 2 cut(s) | 41, 448 |
| NsbI | TGCGCA | 2 cut(s) | 1304, 1649 |
| NspI | RCATGY | 1 cut(s) | 964 |
| OliI | CACNNNNGTG | 1 cut(s) | 70 |
| PceI | AGGCCT | 1 cut(s) | 1263 |
| PciI | ACATGT | 1 cut(s) | 960 |
| PctI | GAATGC | 2 cut(s) | 303, 952 |
| PdmI | GAANNNNTTC | 3 cut(s) | 617, 1061, 1700 |
| PfeI | GAWTC | 3 cut(s) | 473, 640, 1453 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 407, 876 |
| PkrI | GCNGC | 3 cut(s) | 200, 203, 668 |
| PleI | GAGTC | 1 cut(s) | 979 |
| PpsI | GAGTC | 1 cut(s) | 979 |
| Ppu21I | YACGTR | 1 cut(s) | 287 |
| PscI | ACATGT | 1 cut(s) | 960 |
| PshBI | ATTAAT | 1 cut(s) | 48 |
| Psp1406I | AACGTT | 2 cut(s) | 584, 767 |
| Psp6I | CCWGG | 3 cut(s) | 301, 406, 1342 |
| PspFI | CCCAGC | 1 cut(s) | 92 |
| PspGI | CCWGG | 3 cut(s) | 301, 406, 1342 |
| PspN4I | GGNNCC | 1 cut(s) | 425 |
| PspPI | GGNCC | 1 cut(s) | 424 |
| PstI | CTGCAG | 2 cut(s) | 334, 1509 |
| PstNI | CAGNNNCTG | 1 cut(s) | 745 |
| PsuI | RGATCY | 1 cut(s) | 735 |
| RsaI | GTAC | 3 cut(s) | 86, 724, 1412 |
| RsaNI | GTAC | 3 cut(s) | 85, 723, 1411 |
| RseI | CAYNNNNRTG | 3 cut(s) | 70, 446, 680 |
| SaqAI | TTAA | 9 cut(s) | 48, 249, 581, 632, 732, 806, 965, 1011, 1275 |
| SatI | GCNGC | 3 cut(s) | 199, 202, 667 |
| Sau96I | GGNCC | 1 cut(s) | 424 |
| ScaI | AGTACT | 1 cut(s) | 1412 |
| SchI | GAGTC | 1 cut(s) | 980 |
| ScrFI | CCNGG | 3 cut(s) | 303, 408, 1344 |
| SduI | GDGCHC | 3 cut(s) | 462, 1222, 1496 |
| SfaNI | GCATC | 3 cut(s) | 118, 1024, 1290 |
| SfcI | CTRYAG | 3 cut(s) | 330, 453, 1505 |
| SinI | GGWCC | 1 cut(s) | 424 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 70, 446, 680 |
| SmlI | CTYRAG | 2 cut(s) | 626, 1248 |
| SmoI | CTYRAG | 2 cut(s) | 626, 1248 |
| SseBI | AGGCCT | 1 cut(s) | 1263 |
| SsiI | CCGC | 2 cut(s) | 1164, 1288 |
| SspMI | CTAG | 1 cut(s) | 1314 |
| StuI | AGGCCT | 1 cut(s) | 1263 |
| StyD4I | CCNGG | 3 cut(s) | 301, 406, 1342 |
| StyI | CCWWGG | 1 cut(s) | 654 |
| TaaI | ACNGT | 6 cut(s) | 84, 123, 390, 454, 1073, 1389 |
| TaiI | ACGT | 5 cut(s) | 289, 398, 587, 770, 936 |
| TaqI | TCGA | 7 cut(s) | 28, 522, 686, 780, 1101, 1119, 1456 |
| TatI | WGTACW | 2 cut(s) | 84, 1410 |
| TfiI | GAWTC | 3 cut(s) | 473, 640, 1453 |
| Tru1I | TTAA | 9 cut(s) | 48, 249, 581, 632, 732, 806, 965, 1011, 1275 |
| Tru9I | TTAA | 9 cut(s) | 48, 249, 581, 632, 732, 806, 965, 1011, 1275 |
| TscAI | CASTG | 3 cut(s) | 138, 564, 651 |
| TseFI | GTSAC | 2 cut(s) | 41, 448 |
| TseI | GCWGC | 3 cut(s) | 198, 201, 666 |
| Tsp45I | GTSAC | 2 cut(s) | 41, 448 |
| TspDTI | ATGAA | 8 cut(s) | 17, 103, 281, 861, 1010, 1014, 1221, 1514 |
| TspGWI | ACGGA | 1 cut(s) | 6 |
| TspRI | CASTG | 3 cut(s) | 138, 564, 651 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 407, 876 |
| VneI | GTGCAC | 1 cut(s) | 1492 |
| VpaK11BI | GGWCC | 1 cut(s) | 424 |
| VspI | ATTAAT | 1 cut(s) | 48 |
| XapI | RAATTY | 1 cut(s) | 1537 |
| XceI | RCATGY | 1 cut(s) | 964 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 877 |
| XmnI | GAANNNNTTC | 3 cut(s) | 617, 1061, 1700 |
| XspI | CTAG | 1 cut(s) | 1314 |
| ZrmI | AGTACT | 1 cut(s) | 1412 |