Rw5G005070

ADP binding

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr5
OG0002553
Physical Location & Seq
Reverse (-)
5251266 .. 5255391
4126 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw5G005070.1

Sequence Viewer

Length: 3012 bp
ATGGCAGAAACAATTGCACTTGTTTCCAGCGTTTTTGGTTGCCTAACCGTAGCTGTAACTCTGGCGGCACCCTGTTTTCGTGTACCCCTTACGGAAAAATATGATTTCTTCAGGAAACGAGAAAAAAAGCTTCGTGCTCTATTACTTAAACAGAATGAGCTGGAACAGAAATGGAGTAAGGTAGATCAGGAATCTAAGGAGAAGGTGGTGCGTAAGTTTGTGAGAAGTTCAAAGTGGTTGGAAGAGACAGAGAATATTATCAAGGAAGCTGCTGCATGGAAGTTTGAGGAGAGTATACATAAGAAGTATTGCTGTGGTCTACCCAACTATAGGTCACAGTATAAAGCTGGAAAACAAATTTCTGAAAGAATTGACCTGTTGGTTGAACTAATAACCGAAGGCGAAAAATTCATTAATATTCAGGGGTCTGATGTGGTTGGGAAAATGATACGAGGAAGCAAGCTCATGGGGGAGACGGCAAATGCTACAGTTGAAGAGATAAAGAAGTGTGTATCAGGAGAAGAGGTTGGGACGATACGTGTTTATGGAATGGCTGGTTTAGGCAAGTCGAATATTGTATCGCAAGTTAATGACCTGATATTACATGAGGAGGAAGATGATGATAACAGCACAGGAAATGGCCATTTTGATAAAGTTCTTTTTGTGACTGTAAAGAATGAGCTCGGATCAACCAAAGCATCCGTTGAGGATCTGCAGAAGCAGATTGCAGATAAATTACAAATTGATCTTCACAAGGAAAATGGAAGTAGTGCAGATGATGCATTGGCAAGTGCCTTGGCCAAGTTAAGATTTCTGATCATTTTGGATGATATGCAGACAGAACTCTCTTTTGAGGCAATCGGCATTCCAAGGCCAAACAAAGAGAATCGCTGCAAGGTTATAATTGTATCCAGATCACTTCCGGTGTGCAGCGACATCCACGTTGATAAAAAGTTTGAGATCAAACCTTTATCTGCTGCAGAGGCACAAGAACTGTTTGAGAGTGAAGCTGGAATTAAATTTTCAAATCTAGGGGAGGATACTCGAGCCATTGCAAAGGAGATGATAGATGAATGTGATGGTTTTCCCATCACAATTATCTTGCTGGCACGAAACTTGAAGGAATTGATGACCAATGATTCTGATGATGTTGATAAAGTATGGAAGACAGCTTTGACTAAGCTGAAGGATTCTCCAGTTCGTTTAGAAAGCATGACTAAGAGGGCATTTACTCGTTTGAAGCATAGTTATGACATGTTGAGTAAAGAAGCTCAGCAATGTTTCCTCTATTGTGCATTGTACCCGTCTGGCTATGAAATCGAAAAAAGAGAGTTGGTGGAGTATTGGTTTTGGGAGGGTTTATTGGATACCAGAAAGAGAGATGGAAGGATAGAAGATATGATACAAGCAAAAGAGATCCTCGATGAGCTCGCAGCATCTTACCTTCTGGAAACAGTCAGTCAGGAAGGGGGTAAAGAATCCATTAAGATGCGCAGCTTAGCTAAGCATATGGCAATCCACCTGACCAAAACAAGCCCTCAGTTTCTCACCAAAGCTGGAGAAGAGCTAGAAATGTTTCCTTTGCAAGGGGAGTGGCTTCAAGATGTTGAGAGAGCCTCATTGATGAGAAACCAGTTTAAGTTTCTTCAGGGAGAACCCAAATGGCCCAAGCTAACCACATTACTTTTGCAGCATAACCCCATAGGTTTATACTTGCATGAGAATTTCTTTCGTAGTATGCCTAATCTCAATGTTCTTGACCTTTCTTACACTGATATCACTTCCCTTCCACAGTCATCTTTTTCTAAATTGACAAAACTGAGTGCACTTCTCTTGCATCATTGTCGCAACCTAAAAACCCTACCTTCTTTAGAACAGTCCAAGAAACTCCTTGTTCTTGACCTTGCTGATACTCCTGTAGCAGAATTACCAGCCGGGATGAAGAAAATGACCAAACTTATTCGCCTAAACCTATCTCGCACCAATGTGAAGATATTTCCATCTAAGTTAGCACCTGCATTAGGACATCTGGAAGAACTGTTGATGATAATTAATGACTCTGGTTTTTATTGGGGATCAACCAAGGGAGCACATATCAGCGAGCTGAGATCCTGCCAAAATTTAGCTATTCTCCATGCCAACTTCCTAAATGCAGAAACTTTTGTTAGTTATGTTGATAAGCATCTTTGTCCGCCCAGTTTCAGGTTCGGTGTGGGTGGCTCTTGTGAAGAAAAGTTACCTGAAAACAGCATAGTTTTCAAGGGTAACTTCCTAGTGAATGGAGAACCAGTCTCACTCCCAGAACACACATCCGAACTGCATGTCATAAGCAATGAGGATCTACCTTGCTTGCAAGTTGATTGTCATCTAAAGAACCTGATGGTCATTAACATTTGTGACTGCAGATGTTTGGTCCATTTATTCACCACTGACATGTTGGGGAATCTTCCAAACCTTGAAACCATTTCAGTCGAGAAATGTCCAAAGATTGTGAGCTTGATAGAGCCAGAAGAATCTGATGACATGATTAAATCTCGTCTGAAACACCTAAAGGTCATTCGTATCTCTGACTGCGAAAGTTTGGTCTACTTATTCAACAATGAGATGCTGCACTACTTCCCGGAGCTCCTAGAGATCTCCATCAAACGATGCCAGATGATAGAAGTTGTAATAGGGTCAAAAGAGCCAAATGTCTACCCTGCAATTCTTCCAAAGTTACAGGAGTTGGTATTGGCTGATTTGCAAGAATTAAAATGCATCTATAATGGAGAAATGAAGTGGAACTCTCGCGAAACAATTTGGAACTGTCCAGCTCTAAAGATGCCAATGATAACTTCTCTACCTGCAGAACTGCTTCACAGGCCAAGTGGGAGTAATCAACTACAAAGGAGTTATAGCTTAGATGGCAAGGAGACTATACTGCTGGACTCGATTAATATCAATGCAGCGGAAGCTCCTGAATCCGTTGGACCCAAATTTCGTAATGCTGCAAAGGGATGGAGGAGGAACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04626 map04626
Pfam Domains
Protein Families
LRR_8 NB-ARC

Protein Analysis

1003

Amino Acids

113.55

Weight (kDa)

6.06

Isoelectric Point (pI)

46.02

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NB-ARC PF00931 162 - 338 3.2e-25 NB-ARC domain
WHD_DRP PF23559 433 - 501 1e-07 Disease resistance protein Winged helix domain
LRR_8 PF13855 556 - 616 2.4e-09 Leucine rich repeat
LRR_RPS2 PF23247 845 - 925 1.4e-09 Plant disease resistance protein RPS2-like, leucine-rich repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 902
AarI CACCTGC 1 cut(s) 2023
Acc16I TGCGCA 1 cut(s) 1493
Acc36I ACCTGC 2 cut(s) 2023, 2851
AccB1I GGYRCC 1 cut(s) 67
AccI GTMKAC 4 cut(s) 295, 319, 2586, 2694
AccII CGCG 1 cut(s) 2790
AciI CCGC 3 cut(s) 65, 2192, 2948
AclWI GGATC 6 cut(s) 694, 717, 1411, 2083, 2103, 2346
AcoI YGGCCR 2 cut(s) 640, 798
AcsI RAATTY 6 cut(s) 357, 407, 1019, 1723, 2119, 2975
AcuI CTGAAG 3 cut(s) 94, 1205, 1631
AfaI GTAC 2 cut(s) 84, 1301
AfiI CCNNNNNNNGG 4 cut(s) 330, 1586, 2021, 2202
AflIII ACRYGT 3 cut(s) 538, 1254, 2433
AjuI GAANNNNNNNTTGG 2 cut(s) 2818, 2850
AleI CACNNNNGTG 1 cut(s) 1985
Alw21I GWGCWC 6 cut(s) 139, 684, 1431, 1828, 2092, 2628
Alw26I GTCTC 4 cut(s) 239, 467, 2296, 2906
Alw44I GTGCAC 1 cut(s) 1824
AlwI GGATC 6 cut(s) 694, 717, 1411, 2083, 2103, 2346
Ama87I CYCGRG 1 cut(s) 1044
AoxI GGCC 5 cut(s) 640, 798, 872, 1664, 2861
ApaLI GTGCAC 1 cut(s) 1824
ApoI RAATTY 6 cut(s) 357, 407, 1019, 1723, 2119, 2975
ArsI GACNNNNNNTTYG 6 cut(s) 2307, 2339, 2568, 2600, 2961, 2993
AseI ATTAAT 3 cut(s) 414, 2052, 2934
Asp700I GAANNNNTTC 2 cut(s) 1575, 2853
AspLEI GCGC 1 cut(s) 1494
AspS9I GGNCC 3 cut(s) 1665, 2413, 2969
AsuC2I CCSGG 2 cut(s) 1936, 2621
AsuHPI GGTGA 2 cut(s) 1540, 2416
AvaI CYCGRG 1 cut(s) 1044
AvaII GGWCC 2 cut(s) 2413, 2969
BaeGI GKGCMC 1 cut(s) 1828
BaeI ACNNNNGTAYC 2 cut(s) 1902, 1935
BalI TGGCCA 2 cut(s) 642, 800
BanI GGYRCC 1 cut(s) 67
BanII GRGCYC 3 cut(s) 684, 1431, 2628
BarI GAAGNNNNNNTAC 4 cut(s) 1386, 1418, 2220, 2252
BbsI GAAGAC 1 cut(s) 1172
Bbv12I GWGCWC 6 cut(s) 139, 684, 1431, 1828, 2092, 2628
BccI CCATC 8 cut(s) 1073, 1097, 1376, 2008, 2374, 2648, 2897, 2991
BceAI ACGGC 1 cut(s) 492
BcgI CGANNNNNNTGC 2 cut(s) 1826, 1860
BciVI GTATCC 3 cut(s) 919, 1033, 1360
BclI TGATCA 1 cut(s) 816
BcnI CCSGG 2 cut(s) 1936, 2621
BcoDI GTCTC 4 cut(s) 239, 467, 2296, 2906
BfaI CTAG 4 cut(s) 1031, 1568, 2273, 2630
BfmI CTRYAG 7 cut(s) 328, 486, 713, 978, 1917, 2401, 2844
BfuAI ACCTGC 2 cut(s) 2023, 2851
BfuI GTATCC 3 cut(s) 919, 1033, 1360
BglII AGATCT 1 cut(s) 2634
BlpI GCTNAGC 3 cut(s) 1272, 1498, 1503
Bme1390I CCNGG 2 cut(s) 1936, 2621
Bme18I GGWCC 2 cut(s) 2413, 2969
BmeT110I CYCGRG 1 cut(s) 1044
BmgT120I GGNCC 3 cut(s) 1665, 2413, 2969
BmiI GGNNCC 2 cut(s) 69, 2971
BmrFI CCNGG 2 cut(s) 1936, 2621
BmrI ACTGGG 1 cut(s) 2190
BmuI ACTGGG 1 cut(s) 2190
BpiI GAAGAC 1 cut(s) 1172
BplI GAGNNNNNCTC 2 cut(s) 1601, 1633
BpmI CTGGAG 2 cut(s) 1179, 1578
Bpu1102I GCTNAGC 3 cut(s) 1272, 1498, 1503
BpuMI CCSGG 2 cut(s) 1936, 2621
BsaAI YACGTR 1 cut(s) 539
BsaBI GATNNNNATC 4 cut(s) 2181, 2364, 2639, 2936
BsaJI CCNNGG 3 cut(s) 795, 869, 2082
BsaWI WCCGGW 1 cut(s) 922
BsaXI ACNNNNNCTCC 6 cut(s) 510, 540, 1331, 1361, 2274, 2304
Bsc4I CCNNNNNNNGG 4 cut(s) 330, 1586, 2021, 2202
Bse1I ACTGG 4 cut(s) 1196, 1633, 2196, 2288
Bse3DI GCAATG 3 cut(s) 1050, 1283, 2338
Bse8I GATNNNNATC 4 cut(s) 2181, 2364, 2639, 2936
BseDI CCNNGG 3 cut(s) 795, 869, 2082
BseGI GGATG 6 cut(s) 698, 832, 936, 1944, 2309, 3002
BseJI GATNNNNATC 4 cut(s) 2181, 2364, 2639, 2936
BseLI CCNNNNNNNGG 4 cut(s) 330, 1586, 2021, 2202
BseMI GCAATG 3 cut(s) 1050, 1283, 2338
BseMII CTCAG 4 cut(s) 1286, 1553, 1811, 2096
BseNI ACTGG 4 cut(s) 1196, 1633, 2196, 2288
BseRI GAGGAG 2 cut(s) 302, 623
BseSI GKGCMC 1 cut(s) 1828
BsgI GTGCAG 3 cut(s) 792, 949, 2594
Bsh1236I CGCG 1 cut(s) 2790
BshFI GGCC 5 cut(s) 642, 800, 874, 1666, 2863
BshNI GGYRCC 1 cut(s) 67
BsiHKAI GWGCWC 6 cut(s) 139, 684, 1431, 1828, 2092, 2628
BsiHKCI CYCGRG 1 cut(s) 1044
BsiSI CCGG 3 cut(s) 923, 1935, 2621
BslFI GGGAC 1 cut(s) 544
BslI CCNNNNNNNGG 4 cut(s) 330, 1586, 2021, 2202
BsmAI GTCTC 4 cut(s) 239, 467, 2296, 2906
BsmBI CGTCTC 1 cut(s) 467
BsmFI GGGAC 1 cut(s) 544
BsmI GAATGC 1 cut(s) 864
BsnI GGCC 5 cut(s) 642, 800, 874, 1666, 2863
BsoBI CYCGRG 1 cut(s) 1044
Bsp1286I GDGCHC 6 cut(s) 139, 684, 1431, 1828, 2092, 2628
Bsp1720I GCTNAGC 3 cut(s) 1272, 1498, 1503
Bsp68I TCGCGA 1 cut(s) 2790
BspACI CCGC 3 cut(s) 65, 2192, 2948
BspANI GGCC 5 cut(s) 642, 800, 874, 1666, 2863
BspCNI CTCAG 4 cut(s) 1285, 1552, 1812, 2097
BspFNI CGCG 1 cut(s) 2790
BspLI GGNNCC 2 cut(s) 69, 2971
BspMAI CTGCAG 4 cut(s) 717, 982, 2405, 2848
BspMI ACCTGC 2 cut(s) 2023, 2851
BspPI GGATC 6 cut(s) 694, 717, 1411, 2083, 2103, 2346
BspQI GCTCTTC 1 cut(s) 1557
BspT107I GGYRCC 1 cut(s) 67
BsrDI GCAATG 3 cut(s) 1050, 1283, 2338
BsrI ACTGG 4 cut(s) 1196, 1633, 2196, 2288
BssECI CCNNGG 3 cut(s) 795, 869, 2082
BssNAI GTATAC 1 cut(s) 296
BssT1I CCWWGG 3 cut(s) 795, 869, 2082
Bst1107I GTATAC 1 cut(s) 296
Bst6I CTCTTC 4 cut(s) 237, 489, 516, 1557
BstAPI GCANNNNNTGC 1 cut(s) 779
BstBAI YACGTR 1 cut(s) 539
BstC8I GCNNGC 5 cut(s) 461, 1107, 1431, 2102, 2351
BstENI CCTNNNNNAGG 2 cut(s) 1584, 2019
BstF5I GGATG 6 cut(s) 698, 832, 936, 1944, 2309, 3002
BstFNI CGCG 1 cut(s) 2790
BstHHI GCGC 1 cut(s) 1494
BstMAI GTCTC 4 cut(s) 239, 467, 2296, 2906
BstMWI GCNNNNNNNGC 5 cut(s) 779, 983, 2860, 2904, 2951
BstNSI RCATGY 3 cut(s) 1258, 2324, 2437
BstSCI CCNGG 2 cut(s) 1934, 2619
BstSFI CTRYAG 7 cut(s) 328, 486, 713, 978, 1917, 2401, 2844
BstSLI GKGCMC 1 cut(s) 1828
BstUI CGCG 1 cut(s) 2790
BstV2I GAAGAC 1 cut(s) 1172
BstX2I RGATCY 5 cut(s) 709, 1416, 2108, 2338, 2634
BstYI RGATCY 5 cut(s) 709, 1416, 2108, 2338, 2634
BstZ17I GTATAC 1 cut(s) 296
BsuI GTATCC 3 cut(s) 919, 1033, 1360
BsuRI GGCC 5 cut(s) 642, 800, 874, 1666, 2863
BtsCI GGATG 6 cut(s) 698, 832, 936, 1944, 2309, 3002
BtsIMutI CAGTG 2 cut(s) 1770, 2427
BtuMI TCGCGA 1 cut(s) 2790
BveI ACCTGC 2 cut(s) 2023, 2851
Cac8I GCNNGC 5 cut(s) 461, 1107, 1431, 2102, 2351
CfoI GCGC 1 cut(s) 1494
Cfr13I GGNCC 3 cut(s) 1665, 2413, 2969
Csp6I GTAC 2 cut(s) 83, 1300
CspCI CAANNNNNGTGG 2 cut(s) 1574, 1609
CviQI GTAC 2 cut(s) 83, 1300
EaeI YGGCCR 2 cut(s) 640, 798
Eam1104I CTCTTC 4 cut(s) 237, 489, 516, 1557
EarI CTCTTC 4 cut(s) 237, 489, 516, 1557
EciI GGCGGA 1 cut(s) 2181
Ecl136II GAGCTC 3 cut(s) 682, 1429, 2626
Eco130I CCWWGG 3 cut(s) 795, 869, 2082
Eco24I GRGCYC 3 cut(s) 684, 1431, 2628
Eco32I GATATC 1 cut(s) 1777
Eco47I GGWCC 2 cut(s) 2413, 2969
Eco53kI GAGCTC 3 cut(s) 682, 1429, 2626
Eco57I CTGAAG 3 cut(s) 94, 1205, 1631
Eco88I CYCGRG 1 cut(s) 1044
EcoICRI GAGCTC 3 cut(s) 682, 1429, 2626
EcoNI CCTNNNNNAGG 2 cut(s) 1584, 2019
EcoRV GATATC 1 cut(s) 1777
EcoT14I CCWWGG 3 cut(s) 795, 869, 2082
EcoT22I ATGCAT 2 cut(s) 784, 2759
EcoT38I GRGCYC 3 cut(s) 684, 1431, 2628
ErhI CCWWGG 3 cut(s) 795, 869, 2082
Esp3I CGTCTC 1 cut(s) 467
FalI AAGNNNNNCTT 2 cut(s) 2252, 2284
FaqI GGGAC 1 cut(s) 544
FauNDI CATATG 1 cut(s) 1509
FbaI TGATCA 1 cut(s) 816
FblI GTMKAC 4 cut(s) 295, 319, 2586, 2694
FokI GGATG 5 cut(s) 685, 839, 923, 1951, 2296
FriOI GRGCYC 3 cut(s) 684, 1431, 2628
FspBI CTAG 4 cut(s) 1031, 1568, 2273, 2630
FspI TGCGCA 1 cut(s) 1493
GlaI GCGC 1 cut(s) 1493
GsuI CTGGAG 2 cut(s) 1179, 1578
HaeIII GGCC 5 cut(s) 642, 800, 874, 1666, 2863
HapII CCGG 3 cut(s) 923, 1935, 2621
HhaI GCGC 1 cut(s) 1494
Hin6I GCGC 1 cut(s) 1492
HinP1I GCGC 1 cut(s) 1492
HindIII AAGCTT 1 cut(s) 128
HpaII CCGG 3 cut(s) 923, 1935, 2621
HphI GGTGA 2 cut(s) 1540, 2416
Hpy166II GTNNAC 6 cut(s) 83, 296, 320, 1826, 2587, 2695
Hpy188I TCNGA 9 cut(s) 364, 430, 686, 816, 1144, 2314, 2518, 2541, 2569
Hpy8I GTNNAC 6 cut(s) 83, 296, 320, 1826, 2587, 2695
HpyAV CCTTC 9 cut(s) 196, 392, 1114, 1180, 1380, 1454, 1460, 1796, 1875
HpyCH4IV ACGT 2 cut(s) 538, 942
HpyF10VI GCNNNNNNNGC 5 cut(s) 779, 983, 2860, 2904, 2951
HpySE526I ACGT 2 cut(s) 538, 942
HspAI GCGC 1 cut(s) 1492
Ksp22I TGATCA 1 cut(s) 816
LguI GCTCTTC 1 cut(s) 1557
LmnI GCTCC 4 cut(s) 2087, 2623, 2631, 2959
MaeI CTAG 4 cut(s) 1031, 1568, 2273, 2630
MaeII ACGT 2 cut(s) 538, 942
MaeIII GTNAC 7 cut(s) 55, 333, 664, 2235, 2264, 2396, 2715
MfeI CAATTG 1 cut(s) 12
MflI RGATCY 5 cut(s) 709, 1416, 2108, 2338, 2634
MhlI GDGCHC 6 cut(s) 139, 684, 1431, 1828, 2092, 2628
MlsI TGGCCA 2 cut(s) 642, 800
MluNI TGGCCA 2 cut(s) 642, 800
MlyI GAGTC 2 cut(s) 2051, 2921
MmeI TCCRAC 2 cut(s) 219, 2947
Mox20I TGGCCA 2 cut(s) 642, 800
Mph1103I ATGCAT 2 cut(s) 784, 2759
MroXI GAANNNNTTC 2 cut(s) 1575, 2853
MscI TGGCCA 2 cut(s) 642, 800
MslI CAYNNNNRTG 4 cut(s) 1248, 1487, 1985, 2432
Msp20I TGGCCA 2 cut(s) 642, 800
MspA1I CMGCKG 1 cut(s) 2948
MspI CCGG 3 cut(s) 923, 1935, 2621
MspR9I CCNGG 2 cut(s) 1936, 2621
MunI CAATTG 1 cut(s) 12
Mva1269I GAATGC 1 cut(s) 864
MvnI CGCG 1 cut(s) 2790
MwoI GCNNNNNNNGC 5 cut(s) 779, 983, 2860, 2904, 2951
NciI CCSGG 2 cut(s) 1936, 2621
NdeI CATATG 1 cut(s) 1509
NlaIV GGNNCC 2 cut(s) 69, 2971
NmuCI GTSAC 3 cut(s) 333, 664, 2396
NruI TCGCGA 1 cut(s) 2790
NsbI TGCGCA 1 cut(s) 1493
NsiI ATGCAT 2 cut(s) 784, 2759
NspI RCATGY 3 cut(s) 1258, 2324, 2437
OliI CACNNNNGTG 1 cut(s) 1985
PaeR7I CTCGAG 1 cut(s) 1044
PaqCI CACCTGC 1 cut(s) 2023
PciI ACATGT 2 cut(s) 1254, 2433
PciSI GCTCTTC 1 cut(s) 1557
PctI GAATGC 1 cut(s) 864
PdmI GAANNNNTTC 2 cut(s) 1575, 2853
PfeI GAWTC 8 cut(s) 191, 886, 1139, 1190, 1478, 2443, 2513, 2960
PfoI TCCNGGA 1 cut(s) 2619
PleI GAGTC 2 cut(s) 2051, 2921
PpsI GAGTC 2 cut(s) 2051, 2921
Ppu21I YACGTR 1 cut(s) 539
PscI ACATGT 2 cut(s) 1254, 2433
PshBI ATTAAT 3 cut(s) 414, 2052, 2934
PsiI TTATAA 1 cut(s) 902
Psp124BI GAGCTC 3 cut(s) 684, 1431, 2628
PspN4I GGNNCC 2 cut(s) 69, 2971
PspPI GGNCC 3 cut(s) 1665, 2413, 2969
PspXI VCTCGAGB 1 cut(s) 1044
PstI CTGCAG 4 cut(s) 717, 982, 2405, 2848
PsuI RGATCY 5 cut(s) 709, 1416, 2108, 2338, 2634
RruI TCGCGA 1 cut(s) 2790
RsaI GTAC 2 cut(s) 84, 1301
RsaNI GTAC 2 cut(s) 83, 1300
RseI CAYNNNNRTG 4 cut(s) 1248, 1487, 1985, 2432
SacI GAGCTC 3 cut(s) 684, 1431, 2628
SapI GCTCTTC 1 cut(s) 1557
Sau96I GGNCC 3 cut(s) 1665, 2413, 2969
SchI GAGTC 2 cut(s) 2051, 2921
ScrFI CCNGG 2 cut(s) 1936, 2621
SduI GDGCHC 6 cut(s) 139, 684, 1431, 1828, 2092, 2628
SfcI CTRYAG 7 cut(s) 328, 486, 713, 978, 1917, 2401, 2844
Sfr274I CTCGAG 1 cut(s) 1044
SinI GGWCC 2 cut(s) 2413, 2969
SlaI CTCGAG 1 cut(s) 1044
SmiMI CAYNNNNRTG 4 cut(s) 1248, 1487, 1985, 2432
SmlI CTYRAG 1 cut(s) 1044
SmoI CTYRAG 1 cut(s) 1044
SsiI CCGC 3 cut(s) 65, 2192, 2948
SspI AATATT 3 cut(s) 256, 418, 574
SspMI CTAG 4 cut(s) 1031, 1568, 2273, 2630
SstI GAGCTC 3 cut(s) 684, 1431, 2628
StyD4I CCNGG 2 cut(s) 1934, 2619
StyI CCWWGG 3 cut(s) 795, 869, 2082
TaiI ACGT 2 cut(s) 541, 945
TaqI TCGA 6 cut(s) 569, 1045, 1320, 1422, 2472, 2930
TauI GCSGC 1 cut(s) 68
TfiI GAWTC 8 cut(s) 191, 886, 1139, 1190, 1478, 2443, 2513, 2960
TscAI CASTG 2 cut(s) 1777, 2434
TseFI GTSAC 3 cut(s) 333, 664, 2396
Tsp45I GTSAC 3 cut(s) 333, 664, 2396
TspDTI ATGAA 5 cut(s) 400, 1086, 1329, 1955, 2789
TspGWI ACGGA 3 cut(s) 107, 691, 2953
TspRI CASTG 2 cut(s) 1777, 2434
VneI GTGCAC 1 cut(s) 1824
VpaK11BI GGWCC 2 cut(s) 2413, 2969
VspI ATTAAT 3 cut(s) 414, 2052, 2934
XagI CCTNNNNNAGG 2 cut(s) 1584, 2019
XapI RAATTY 6 cut(s) 357, 407, 1019, 1723, 2119, 2975
XceI RCATGY 3 cut(s) 1258, 2324, 2437
XcmI CCANNNNNNNNNTGG 1 cut(s) 2434
XhoI CTCGAG 1 cut(s) 1044
XmiI GTMKAC 4 cut(s) 295, 319, 2586, 2694
XmnI GAANNNNTTC 2 cut(s) 1575, 2853
XspI CTAG 4 cut(s) 1031, 1568, 2273, 2630
Zsp2I ATGCAT 2 cut(s) 784, 2759
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.