Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5D

Orthogroup ID

OG0002553

Physical Location & Seq

Genomic Coordinates Reverse (-)

4125140 .. 4167509

Gene Structure 42370 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5DG049500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3024 bp

ATGGCAGAAACGGTTGCAGTTGTTTCCAGCGTCTTCGGCTGTCTAACTGTAGTTGTAACTCTGGTATCACCCTGTTTACGTGATCCCCTATCAGACGAATACAACATTTTCAGGAAAAGAAAAGAAAACCTTGCTACTTTACAAAGTGAAATTCAAAACCTGAAACAGCAAATTAGTGAAGTGGAACGACAATCCAAGGAGAAGGTGGTGAGCAAGTCTTTAAAAGTATCCGAGTGGTTGAAAAAGGCAGACAAGTTTATCAATGATGTTGCTGACTCAAATTTTGAAGGCAGACTACTTGAGAATTGCTGTGGTCTACCCTACTGTAGGTCACAGTATAATGCTGGAAAAGAAATTGCAGAAAGAATTACACAGTTGACTGCACTTGAGAAGGAAGGTGAAAAATACATTAATGTGGCAGAGTCCAATGTGGTTGGCCAACTGATCGGCACCACAAAATCAGTGGGAGGGGCAGCAAGAACAGTGGAAGAGATCAAGAAGTATGTAACAGAAAAGGTAACAGAAAACGGAGTCGGGACGATACGTGTTTATGGAGTGGCTGGATGTGGCAAGACAAAAGTTGTAGCTGAAGTGAATGACCTTGTATTAAATGACTGCAAAAACTGTGCCTCAGAAGATGTCAATAACAGAAAAGAAAAAGAGCTTTTTGATAAAGTTATTTCTGTCACCGTAGAGAATAATCTGGGATCAACTGAAGCATCCATTGAAAATCTGCAGAAGAAAATTGCCGAGAAGTTACAAGTGGATCTTAATAACTCACCCGGGAGTAGAGCAGACACATTGGGGAGGGCACTGAAGAAGTTGAAATTTCTGATCATTTTGGATGATATGTGGACAGAGTTCTCTCTCGAGGCAATTGGGATTCCAAGGCCAAACAAAGTAAATGGATGCAAGCTTATAATTGTGTCTAGATCACTTCCGGTCTGCAGTGACATCCACATTGATAAGAAGTTTGAGATTAAACTTCTATCAGGTACAGATGCTGAAGCATTGTTCGAGACTGAAGCTGGCATTAAGTTATCACAACTAGGGGATGATACTCGAGCCACAGCAAAGAACATGATAGATGAACGTGATGGTTTTCCTTTGGCAATTATCTTGCTGGCACGAGCCTTGAGAGAATCAAAGACCGACGATGCTGAGGATGTTGATGGTGAATGGAAAAAAGCTTTGACTTGGTTGAAAGAATCTACAGCCCCCTTGGAAAGCATGAATGAGAGGGCATTTGCCCGTCTGAAATATAGCTATGATATGTTGAAGAAAGATGCTCAGCAGTGTTTCCTTTACTGTGCATTATACCCAGCTGGTCATGACATTGAAAAAAAAGAGTTGGTGGAGTATTGGTTCTGGGAGGGTTTATTGGATGGCAGAAAGAGAAGTGGGCAGATCGAAGATATGAAACGAGCAAAAGAGATAATAGATGAGCTGAATGGAGCTCACCTTCTCGAAATAGAAAGTCAGGAAGGTGGCAAAGAATACATCAAGATGAGAAACTTAGTTAGGCACATGGCAGTCCATCTTACCAAGATGAGCCCCGATCAGTTTCTCATCAAAGCAGGGGAGAAGCTTTCTGACTTCCCATCACAAGGCGAGTACTGGTCTGAAGTAGAGAGAACCTCATTGATGAGAAATGAGTTTAAAGCACTTCGAGAAGAACCCAAGTTTCCCAAGCTATCTACATTACTTCTGCAGCACAATCCCATCACTCACTTGCATGATAATTTCTTTCGCAGTATGCCTAACATCAAAGTTCTTGACCTTTCGCATACTCATATCTTTTCCCTTCCCAAATCAACCTTTTCTAACTTGACAAAACTAAAGGCATTACTGTTGCGAAATTGTCAGAACTTACACACTCTGCCTTCTTTGTCAACCTCTAAGAAACTACTTGTTCTTGACCTTTCTGATACTCCCATAACACGATTGCCGGATGGGATGAAGCAACTAACCAGCCTTATTCGCCTAAACTTGTCTGGTACCAATGTGGGAGAACTCGAAGCTGAACTAGTGCACGCATTGCAACGTCTGAAAGAACTGCTAATGATAACAAATGATGCAGGTTCTCTGTGGGGATCAACCAAAGGAGCAAGTGTTAAGGAGCTGGGAGCCCTTTCGCATTTAGCTATACTTCACATCAACTTTGTAGATGCAGAAGCCTTTAATAGATATGTCAATTCGAGGAATCATTCTCTGTCCAAGTTCAAATTCTGTGTCGGCGGTTCTTGTAAGAAGCCGTTACCTGATAACAGCATAGCCTTCATCAATAGTAACATCCTTGTGAAAGGAAAACCAGTCTCACTGCCTCAAGACACATCTGAGCTGCATGTAATGAGAAATTTGGATCTGCGTTGCTTGCCAAGTTGTTGCTTAGATAGCTTGAAGGTCATCAACATTTCTGGCTGCGAAAGTTTGGTCTATTTATTCAACATTAACATGGTGTACAACCTTCCAAACCTGGAAACAATTTCAGTTGAAAAATGTCAGAAGATGGAGGCACTGATAGAGTGGTCAGAATATCCTGATGATTCACTTCATTCAAAGAACCTAAAGTTCATCCATATCTCTGACTGTGGAAAGTTGGTCTACTTATTCAGAATTGAGATGCTGAGATTCATGCCAAATCTTCAAGAAATCTCCATCCGACAGCGCCAGTTATCAACTGAAGTGGGAAAGGAGCCATATGATCCTCCTGCTATTCATCCAAGATTACAGGACCGTTTGTTTGTTGATCCACTTAAGTTGAAGAGCATTTATAGTAATGTACAAATGGAGGGTAATTCTCAGCAAACCATCTGGAACTTTCCTGAACTAAAAATGCACATCATAACTTCTCTGCCAGCCAAGCCAAGTGGGAGCAATCAACTACAAAGGAGTTATAGCTTAGATGGCAAGGAGACTATACTGCTGGACTCGATTAATATCAATGCAGCGGAAGCTCCTGAATCCGTTGGACCCAAATTTCGTAATGCTGCAAAGGGTAATACATCAACCAAGCAAATTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko04626 map04626

Pfam Domains

Protein Families

LRR_8 NB-ARC

Protein Analysis

1007

Amino Acids

113.2

Weight (kDa)

7.25

Isoelectric Point (pI)

39.64

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
NB-ARC	PF00931	165 - 343	2.1e-21	NB-ARC domain
WHD_DRP	PF23559	439 - 511	3.7e-07	Disease resistance protein Winged helix domain
LRR_14	PF23598	553 - 744	3.7e-11	Leucine-rich repeat region
LRR_8	PF13855	563 - 622	1.4e-11	Leucine rich repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002553)

Species	Orthologous Gene IDs
prunus_persica	Prupe.4G038400_v2.0.a1 Prupe.4G038500_v2.0.a1 Prupe.4G038500_v2.0.a1 Prupe.4G038500_v2.0.a1 Prupe.4G038500_v2.0.a1 Prupe.4G038500_v2.0.a1 Prupe.4G109000_v2.0.a1
rosa_chinensis	RchiOBHm_Chr5g0006451 RchiOBHm_Chr5g0006641
rosa_laevigata	RLG00000010123 RLG00000031358 RLG00000031359 RLG00000031409 RLG00000031412 RLG00000031414 RLG00000031415 RLG00000031416
rosa_multiflora	Rmu_co8352783.1_g000001 Rmu_sc0001972.1_g000012 Rmu_sc0001972.1_g000020 Rmu_sc0001972.1_g000021 Rmu_sc0002972.1_g000002 Rmu_sc0008991.1_g000009 Rmu_sc0031143.1_g000001
rosa_roxburghii	Rroxscaffold_1G00069360
rosa_rugosa	Rorug04G0423500 Rorug04G0423600 Rorug04G0423700
rosa_samantha	Rh5AG051300 Rh5AG264900 Rh5AG265100 Rh5BG050100 Rh5BG050300 Rh5BG050400 Rh5CG058400 Rh5CG058900 Rh5CG079700 Rh5DG049500
rosa_wichuraiana	Rw5G005070 Rw5G005310 Rw5G005320

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	920
Acc36I	ACCTGC	1 cut(s)	2069
Acc65I	GGTACC	1 cut(s)	1997
AccB1I	GGYRCC	2 cut(s)	449, 1997
AccI	GTMKAC	2 cut(s)	316, 2604
AciI	CCGC	2 cut(s)	2238, 2951
AclWI	GGATC	7 cut(s)	77, 715, 774, 2101, 2370, 2699, 2744
AcoI	YGGCCR	1 cut(s)	436
AcsI	RAATTY	7 cut(s)	150, 280, 827, 2225, 2356, 2978, 3018
AcuI	CTGAAG	7 cut(s)	609, 735, 836, 1026, 1044, 1644, 2703
AfaI	GTAC	5 cut(s)	997, 1616, 1999, 2462, 2784
AfiI	CCNNNNNNNGG	2 cut(s)	327, 1607
AflII	CTTAAG	1 cut(s)	2756
AflIII	ACRYGT	1 cut(s)	544
AhlI	ACTAGT	1 cut(s)	2026
AjnI	CCWGG	1 cut(s)	2475
AjuI	GAANNNNNNNTTGG	2 cut(s)	2210, 2242
AloI	GAACNNNNNNTCC	2 cut(s)	1349, 1381
Alw21I	GWGCWC	2 cut(s)	1459, 2034
Alw26I	GTCTC	3 cut(s)	1013, 2320, 2909
Alw44I	GTGCAC	1 cut(s)	2030
AlwI	GGATC	7 cut(s)	77, 715, 774, 2101, 2370, 2699, 2744
AlwNI	CAGNNNCTG	1 cut(s)	1004
Ama87I	CYCGRG	3 cut(s)	782, 869, 1062
AoxI	GGCC	2 cut(s)	436, 890
ApaLI	GTGCAC	1 cut(s)	2030
ApeKI	GCWGC	6 cut(s)	473, 1711, 2341, 2421, 2948, 2990
ApoI	RAATTY	7 cut(s)	150, 280, 827, 2225, 2356, 2978, 3018
AseI	ATTAAT	2 cut(s)	411, 2937
Asp718I	GGTACC	1 cut(s)	1997
AspLEI	GCGC	1 cut(s)	2670
AspS9I	GGNCC	2 cut(s)	2734, 2972
AsuC2I	CCSGG	2 cut(s)	783, 784
AsuHPI	GGTGA	7 cut(s)	60, 220, 410, 679, 771, 1187, 1451
AvaI	CYCGRG	3 cut(s)	782, 869, 1062
AvaII	GGWCC	2 cut(s)	2734, 2972
BaeGI	GKGCMC	2 cut(s)	814, 2034
BaeI	ACNNNNGTAYC	4 cut(s)	48, 81, 1989, 2022
BalI	TGGCCA	1 cut(s)	438
BanI	GGYRCC	2 cut(s)	449, 1997
BanII	GRGCYC	3 cut(s)	1459, 1556, 2131
BarI	GAAGNNNNNNTAC	2 cut(s)	279, 311
BauI	CACGAG	1 cut(s)	1128
BbsI	GAAGAC	1 cut(s)	25
Bbv12I	GWGCWC	2 cut(s)	1459, 2034
BbvCI	CCTCAGC	1 cut(s)	1161
BbvI	GCAGC	6 cut(s)	485, 1723, 2328, 2408, 2960, 2977
BceAI	ACGGC	1 cut(s)	2239
BciT130I	CCWGG	1 cut(s)	2477
BciVI	GTATCC	1 cut(s)	238
BclI	TGATCA	1 cut(s)	834
BcnI	CCSGG	2 cut(s)	783, 784
BcoDI	GTCTC	3 cut(s)	1013, 2320, 2909
BcuI	ACTAGT	1 cut(s)	2026
BfaI	CTAG	3 cut(s)	930, 1049, 2027
BfmI	CTRYAG	6 cut(s)	48, 325, 734, 946, 1212, 1709
BfoI	RGCGCY	1 cut(s)	2671
BfrI	CTTAAG	1 cut(s)	2756
BfuAI	ACCTGC	1 cut(s)	2069
BfuI	GTATCC	1 cut(s)	238
BisI	GCNGC	6 cut(s)	474, 1712, 2342, 2422, 2949, 2991
BlpI	GCTNAGC	1 cut(s)	1290
BlsI	GCNGC	6 cut(s)	475, 1713, 2343, 2423, 2950, 2992
BmcAI	AGTACT	1 cut(s)	1616
Bme1390I	CCNGG	3 cut(s)	783, 784, 2477
Bme18I	GGWCC	2 cut(s)	2734, 2972
BmeT110I	CYCGRG	3 cut(s)	782, 869, 1062
BmgT120I	GGNCC	2 cut(s)	2734, 2972
BmiI	GGNNCC	5 cut(s)	451, 1999, 2128, 2697, 2974
BmrFI	CCNGG	3 cut(s)	783, 784, 2477
BmsI	GCATC	8 cut(s)	728, 899, 991, 1147, 1276, 2065, 2158, 2613
BpiI	GAAGAC	1 cut(s)	25
BplI	GAGNNNNNCTC	2 cut(s)	1622, 1654
Bpu10I	CCTNAGC	1 cut(s)	1161
Bpu1102I	GCTNAGC	1 cut(s)	1290
BpuEI	CTTGAG	4 cut(s)	320, 407, 1156, 2310
BpuMI	CCSGG	2 cut(s)	783, 784
BsaAI	YACGTR	2 cut(s)	80, 545
BsaBI	GATNNNNATC	1 cut(s)	2939
BsaJI	CCNNGG	4 cut(s)	195, 782, 887, 1221
BsaWI	WCCGGW	1 cut(s)	940
BsaXI	ACNNNNNCTCC	4 cut(s)	1349, 1379, 2097, 2127
Bsc4I	CCNNNNNNNGG	2 cut(s)	327, 1607
Bse1I	ACTGG	3 cut(s)	1622, 2312, 2671
Bse3DI	GCAATG	1 cut(s)	2036
Bse8I	GATNNNNATC	1 cut(s)	2939
BseBI	CCWGG	1 cut(s)	2477
BseDI	CCNNGG	4 cut(s)	195, 782, 887, 1221
BseJI	GATNNNNATC	1 cut(s)	2939
BseLI	CCNNNNNNNGG	2 cut(s)	327, 1607
BseMI	GCAATG	1 cut(s)	2036
BseMII	CTCAG	6 cut(s)	645, 1152, 1304, 2328, 2618, 2816
BseNI	ACTGG	3 cut(s)	1622, 2312, 2671
BseSI	GKGCMC	2 cut(s)	814, 2034
BseXI	GCAGC	6 cut(s)	485, 1723, 2328, 2408, 2960, 2977
BseYI	CCCAGC	2 cut(s)	1321, 2122
BsgI	GTGCAG	1 cut(s)	366
BshFI	GGCC	2 cut(s)	438, 892
BshNI	GGYRCC	2 cut(s)	449, 1997
BsiHKAI	GWGCWC	2 cut(s)	1459, 2034
BsiHKCI	CYCGRG	3 cut(s)	782, 869, 1062
BsiSI	CCGG	3 cut(s)	783, 941, 1949
BslFI	GGGAC	1 cut(s)	550
BslI	CCNNNNNNNGG	2 cut(s)	327, 1607
BsmAI	GTCTC	3 cut(s)	1013, 2320, 2909
BsmFI	GGGAC	1 cut(s)	550
BsnI	GGCC	2 cut(s)	438, 892
BsoBI	CYCGRG	3 cut(s)	782, 869, 1062
Bsp1286I	GDGCHC	5 cut(s)	814, 1459, 1556, 2034, 2131
Bsp1407I	TGTACA	2 cut(s)	2460, 2782
Bsp1720I	GCTNAGC	1 cut(s)	1290
BspACI	CCGC	2 cut(s)	2238, 2951
BspANI	GGCC	2 cut(s)	438, 892
BspCNI	CTCAG	6 cut(s)	644, 1153, 1303, 2329, 2619, 2815
BspHI	TCATGA	1 cut(s)	1330
BspLI	GGNNCC	5 cut(s)	451, 1999, 2128, 2697, 2974
BspMAI	CTGCAG	3 cut(s)	738, 950, 1713
BspMI	ACCTGC	1 cut(s)	2069
BspPI	GGATC	7 cut(s)	77, 715, 774, 2101, 2370, 2699, 2744
BspQI	GCTCTTC	1 cut(s)	2759
BspT107I	GGYRCC	2 cut(s)	449, 1997
BspTI	CTTAAG	1 cut(s)	2756
BsrDI	GCAATG	1 cut(s)	2036
BsrGI	TGTACA	2 cut(s)	2460, 2782
BsrI	ACTGG	3 cut(s)	1622, 2312, 2671
BssECI	CCNNGG	4 cut(s)	195, 782, 887, 1221
BssSI	CACGAG	1 cut(s)	1128
BssT1I	CCWWGG	3 cut(s)	195, 887, 1221
Bst2BI	CACGAG	1 cut(s)	1128
Bst2UI	CCWGG	1 cut(s)	2477
Bst6I	CTCTTC	2 cut(s)	483, 2759
BstAFI	CTTAAG	1 cut(s)	2756
BstAPI	GCANNNNNTGC	1 cut(s)	2038
BstAUI	TGTACA	2 cut(s)	2460, 2782
BstBAI	YACGTR	2 cut(s)	80, 545
BstC8I	GCNNGC	6 cut(s)	914, 1030, 1125, 2034, 2375, 2859
BstENI	CCTNNNNNAGG	1 cut(s)	325
BstH2I	RGCGCY	1 cut(s)	2671
BstHHI	GCGC	1 cut(s)	2670
BstMAI	GTCTC	3 cut(s)	1013, 2320, 2909
BstMWI	GCNNNNNNNGC	8 cut(s)	36, 1980, 2038, 2374, 2394, 2863, 2907, 2954
BstNI	CCWGG	1 cut(s)	2477
BstNSI	RCATGY	1 cut(s)	2348
BstSCI	CCNGG	3 cut(s)	781, 782, 2475
BstSFI	CTRYAG	6 cut(s)	48, 325, 734, 946, 1212, 1709
BstSLI	GKGCMC	2 cut(s)	814, 2034
BstV1I	GCAGC	6 cut(s)	485, 1723, 2328, 2408, 2960, 2977
BstV2I	GAAGAC	1 cut(s)	25
BstX2I	RGATCY	2 cut(s)	766, 2362
BstYI	RGATCY	2 cut(s)	766, 2362
BsuI	GTATCC	1 cut(s)	238
BsuRI	GGCC	2 cut(s)	438, 892
BtsI	GCAGTG	3 cut(s)	955, 1301, 2318
BtsIMutI	CAGTG	7 cut(s)	468, 489, 812, 955, 1301, 2318, 2516
BveI	ACCTGC	1 cut(s)	2069
Cac8I	GCNNGC	6 cut(s)	914, 1030, 1125, 2034, 2375, 2859
CaiI	CAGNNNCTG	1 cut(s)	1004
CciI	TCATGA	1 cut(s)	1330
CfoI	GCGC	1 cut(s)	2670
Cfr13I	GGNCC	2 cut(s)	2734, 2972
Cfr9I	CCCGGG	1 cut(s)	782
CseI	GACGC	1 cut(s)	19
Csp6I	GTAC	5 cut(s)	996, 1615, 1998, 2461, 2783
CviAII	CATG	8 cut(s)	1081, 1231, 1331, 1528, 1736, 2345, 2455, 2635
CviQI	GTAC	5 cut(s)	996, 1615, 1998, 2461, 2783
DraI	TTTAAA	2 cut(s)	222, 1660
EaeI	YGGCCR	1 cut(s)	436
Eam1104I	CTCTTC	2 cut(s)	483, 2759
EarI	CTCTTC	2 cut(s)	483, 2759
Ecl136II	GAGCTC	1 cut(s)	1457
Eco130I	CCWWGG	3 cut(s)	195, 887, 1221
Eco24I	GRGCYC	3 cut(s)	1459, 1556, 2131
Eco47I	GGWCC	2 cut(s)	2734, 2972
Eco53kI	GAGCTC	1 cut(s)	1457
Eco57I	CTGAAG	7 cut(s)	609, 735, 836, 1026, 1044, 1644, 2703
Eco88I	CYCGRG	3 cut(s)	782, 869, 1062
EcoICRI	GAGCTC	1 cut(s)	1457
EcoNI	CCTNNNNNAGG	1 cut(s)	325
EcoRII	CCWGG	1 cut(s)	2475
EcoT14I	CCWWGG	3 cut(s)	195, 887, 1221
EcoT38I	GRGCYC	3 cut(s)	1459, 1556, 2131
ErhI	CCWWGG	3 cut(s)	195, 887, 1221
FaeI	CATG	8 cut(s)	1084, 1234, 1334, 1531, 1739, 2348, 2458, 2638
FalI	AAGNNNNNCTT	4 cut(s)	114, 146, 753, 785
FaqI	GGGAC	1 cut(s)	550
FatI	CATG	8 cut(s)	1080, 1230, 1330, 1527, 1735, 2344, 2454, 2634
FauNDI	CATATG	1 cut(s)	2701
FbaI	TGATCA	1 cut(s)	834
FblI	GTMKAC	2 cut(s)	316, 2604
Fnu4HI	GCNGC	6 cut(s)	474, 1712, 2342, 2422, 2949, 2991
FriOI	GRGCYC	3 cut(s)	1459, 1556, 2131
Fsp4HI	GCNGC	6 cut(s)	474, 1712, 2342, 2422, 2949, 2991
FspBI	CTAG	3 cut(s)	930, 1049, 2027
GlaI	GCGC	1 cut(s)	2669
GluI	GCNGC	6 cut(s)	474, 1712, 2342, 2422, 2949, 2991
GsaI	CCCAGC	2 cut(s)	1325, 2126
HaeII	RGCGCY	1 cut(s)	2671
HaeIII	GGCC	2 cut(s)	438, 892
HapII	CCGG	3 cut(s)	783, 941, 1949
HgaI	GACGC	1 cut(s)	19
HhaI	GCGC	1 cut(s)	2670
Hin1II	CATG	8 cut(s)	1084, 1234, 1334, 1531, 1739, 2348, 2458, 2638
Hin6I	GCGC	1 cut(s)	2668
HinP1I	GCGC	1 cut(s)	2668
HincII	GTYRAC	2 cut(s)	378, 1893
HindII	GTYRAC	2 cut(s)	378, 1893
HindIII	AAGCTT	3 cut(s)	914, 1188, 1586
HpaII	CCGG	3 cut(s)	783, 941, 1949
HphI	GGTGA	7 cut(s)	60, 220, 410, 679, 771, 1187, 1451
Hpy166II	GTNNAC	8 cut(s)	77, 317, 378, 855, 1893, 2032, 2461, 2605
Hpy8I	GTNNAC	8 cut(s)	77, 317, 378, 855, 1893, 2032, 2461, 2605
Hpy99I	CGWCG	1 cut(s)	1157
HpyCH4IV	ACGT	4 cut(s)	79, 544, 1093, 2044
HpyF10VI	GCNNNNNNNGC	8 cut(s)	36, 1980, 2038, 2374, 2394, 2863, 2907, 2954
HpySE526I	ACGT	4 cut(s)	79, 544, 1093, 2044
Hsp92II	CATG	8 cut(s)	1084, 1234, 1334, 1531, 1739, 2348, 2458, 2638
HspAI	GCGC	1 cut(s)	2668
KpnI	GGTACC	1 cut(s)	2001
Ksp22I	TGATCA	1 cut(s)	834
LguI	GCTCTTC	1 cut(s)	2759
LmnI	GCTCC	7 cut(s)	1454, 2105, 2119, 2126, 2695, 2874, 2962
Lsp1109I	GCAGC	6 cut(s)	485, 1723, 2328, 2408, 2960, 2977
LweI	GCATC	8 cut(s)	728, 899, 991, 1147, 1276, 2065, 2158, 2613
MaeI	CTAG	3 cut(s)	930, 1049, 2027
MaeII	ACGT	4 cut(s)	79, 544, 1093, 2044
MaeIII	GTNAC	9 cut(s)	55, 330, 505, 517, 685, 756, 950, 2256, 2288
MfeI	CAATTG	1 cut(s)	876
MflI	RGATCY	2 cut(s)	766, 2362
MhlI	GDGCHC	5 cut(s)	814, 1459, 1556, 2034, 2131
MlsI	TGGCCA	1 cut(s)	438
MluNI	TGGCCA	1 cut(s)	438
MlyI	GAGTC	4 cut(s)	269, 431, 540, 2924
MmeI	TCCRAC	2 cut(s)	2686, 2950
Mox20I	TGGCCA	1 cut(s)	438
MscI	TGGCCA	1 cut(s)	438
MslI	CAYNNNNRTG	5 cut(s)	413, 1505, 1734, 2297, 2453
Msp20I	TGGCCA	1 cut(s)	438
MspA1I	CMGCKG	2 cut(s)	1325, 2951
MspCI	CTTAAG	1 cut(s)	2756
MspI	CCGG	3 cut(s)	783, 941, 1949
MspR9I	CCNGG	3 cut(s)	783, 784, 2477
MunI	CAATTG	1 cut(s)	876
MvaI	CCWGG	1 cut(s)	2477
MwoI	GCNNNNNNNGC	8 cut(s)	36, 1980, 2038, 2374, 2394, 2863, 2907, 2954
NciI	CCSGG	2 cut(s)	783, 784
NdeI	CATATG	1 cut(s)	2701
NlaIII	CATG	8 cut(s)	1084, 1234, 1334, 1531, 1739, 2348, 2458, 2638
NlaIV	GGNNCC	5 cut(s)	451, 1999, 2128, 2697, 2974
NmeAIII	GCCGAG	1 cut(s)	775
NmuCI	GTSAC	3 cut(s)	330, 685, 950
NspI	RCATGY	1 cut(s)	2348
PaeR7I	CTCGAG	2 cut(s)	869, 1062
PagI	TCATGA	1 cut(s)	1330
PciSI	GCTCTTC	1 cut(s)	2759
PfeI	GAWTC	7 cut(s)	883, 1142, 1208, 2203, 2546, 2631, 2963
PkrI	GCNGC	6 cut(s)	475, 1713, 2343, 2423, 2950, 2992
PleI	GAGTC	4 cut(s)	269, 430, 539, 2924
PpsI	GAGTC	4 cut(s)	269, 430, 539, 2924
Ppu21I	YACGTR	2 cut(s)	80, 545
PshBI	ATTAAT	2 cut(s)	411, 2937
PsiI	TTATAA	1 cut(s)	920
Psp124BI	GAGCTC	1 cut(s)	1459
Psp6I	CCWGG	1 cut(s)	2475
PspFI	CCCAGC	2 cut(s)	1321, 2122
PspGI	CCWGG	1 cut(s)	2475
PspN4I	GGNNCC	5 cut(s)	451, 1999, 2128, 2697, 2974
PspPI	GGNCC	2 cut(s)	2734, 2972
PspXI	VCTCGAGB	1 cut(s)	1062
PstI	CTGCAG	3 cut(s)	738, 950, 1713
PstNI	CAGNNNCTG	1 cut(s)	1004
PsuI	RGATCY	2 cut(s)	766, 2362
PvuII	CAGCTG	1 cut(s)	1325
RsaI	GTAC	5 cut(s)	997, 1616, 1999, 2462, 2784
RsaNI	GTAC	5 cut(s)	996, 1615, 1998, 2461, 2783
RseI	CAYNNNNRTG	5 cut(s)	413, 1505, 1734, 2297, 2453
SacI	GAGCTC	1 cut(s)	1459
SapI	GCTCTTC	1 cut(s)	2759
SatI	GCNGC	6 cut(s)	474, 1712, 2342, 2422, 2949, 2991
Sau96I	GGNCC	2 cut(s)	2734, 2972
ScaI	AGTACT	1 cut(s)	1616
SchI	GAGTC	4 cut(s)	269, 431, 540, 2924
ScrFI	CCNGG	3 cut(s)	783, 784, 2477
SduI	GDGCHC	5 cut(s)	814, 1459, 1556, 2034, 2131
SfaNI	GCATC	8 cut(s)	728, 899, 991, 1147, 1276, 2065, 2158, 2613
SfcI	CTRYAG	6 cut(s)	48, 325, 734, 946, 1212, 1709
Sfr274I	CTCGAG	2 cut(s)	869, 1062
SinI	GGWCC	2 cut(s)	2734, 2972
SlaI	CTCGAG	2 cut(s)	869, 1062
SmaI	CCCGGG	1 cut(s)	784
SmiMI	CAYNNNNRTG	5 cut(s)	413, 1505, 1734, 2297, 2453
SmlI	CTYRAG	7 cut(s)	299, 386, 869, 1062, 1135, 2325, 2756
SmoI	CTYRAG	7 cut(s)	299, 386, 869, 1062, 1135, 2325, 2756
SpeI	ACTAGT	1 cut(s)	2026
SsiI	CCGC	2 cut(s)	2238, 2951
SspMI	CTAG	3 cut(s)	930, 1049, 2027
SstI	GAGCTC	1 cut(s)	1459
StyD4I	CCNGG	3 cut(s)	781, 782, 2475
StyI	CCWWGG	3 cut(s)	195, 887, 1221
TaiI	ACGT	4 cut(s)	82, 547, 1096, 2047
TaqI	TCGA	9 cut(s)	870, 1017, 1063, 1410, 1467, 1669, 2016, 2198, 2933
TaqII	GACCGA	1 cut(s)	1166
TatI	WGTACW	3 cut(s)	1614, 2460, 2782
TfiI	GAWTC	7 cut(s)	883, 1142, 1208, 2203, 2546, 2631, 2963
TscAI	CASTG	7 cut(s)	468, 489, 819, 955, 1301, 2325, 2523
TseFI	GTSAC	3 cut(s)	330, 685, 950
TseI	GCWGC	6 cut(s)	473, 1711, 2341, 2421, 2948, 2990
Tsp45I	GTSAC	3 cut(s)	330, 685, 950
TspDTI	ATGAA	9 cut(s)	1104, 1247, 1433, 1973, 2269, 2543, 2563, 2623, 2708
TspGWI	ACGGA	2 cut(s)	543, 2956
TspMI	CCCGGG	1 cut(s)	782
TspRI	CASTG	7 cut(s)	468, 489, 819, 955, 1301, 2325, 2523
Vha464I	CTTAAG	1 cut(s)	2756
VneI	GTGCAC	1 cut(s)	2030
VpaK11BI	GGWCC	2 cut(s)	2734, 2972
VspI	ATTAAT	2 cut(s)	411, 2937
XagI	CCTNNNNNAGG	1 cut(s)	325
XapI	RAATTY	7 cut(s)	150, 280, 827, 2225, 2356, 2978, 3018
XbaI	TCTAGA	1 cut(s)	929
XceI	RCATGY	1 cut(s)	2348
XcmI	CCANNNNNNNNNTGG	2 cut(s)	202, 460
XhoI	CTCGAG	2 cut(s)	869, 1062
XmaI	CCCGGG	1 cut(s)	782
XmiI	GTMKAC	2 cut(s)	316, 2604
XspI	CTAG	3 cut(s)	930, 1049, 2027
ZrmI	AGTACT	1 cut(s)	1616

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.