Rw5G005310

ADP binding

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr5
Physical Location & Seq
Forward (+)
5528165 .. 5533772
5608 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw5G005310.1

Sequence Viewer

Length: 3153 bp
ATGGCAGAAACGATTGCAGTAGTTTCCAGCGTCTTCGGCTGTCTAACTGTAGTTGTAACTCTGGTATCACCCTGTTTACGTGATCCCCTATCAGAAGAATACAACATTTTCAGGAAAAGAAAAGAAAACCTTGCTACTTTACAAAGTGAAATTCAAAACCTGGAACAGCAAATTAGTGAAGTGGAACGACAATCCAAGGAGAAGGTGGTGAGCAGGTCTTTAAAAGTATCCGACTGGTTGGACAAGGCACGAAAATTTATCAAGGATGTTACTGACTCAAATTTTGATGACAGACTACTTGAGAATTGCTTTGGTCTACCCTACTGTAGGTCACAGTATAATGCTGGAAAAGAAATTGCAGAAAGAATTACACAGTTGACTGCACTTGAGAAGGAAGGTGAAAAATACATTAATGTGGCAGAGTCCAATGTGGTTGGCCAACTGATCGGCACCACAAAATCAGTGGGAGAGGCAGCAAGAACAGTGGAAGAGATTAAGAAGTATGTAACAGAAAACGGAGTCGGGACGATACGTGTTTATGGAGTGGCTGGATGTGGCAAGACAAAAGTTGTAGCTGAAGTGAATGACCTTGTATTAAATGACTGCAAAAACTGTGCCTCAGAAGATGTCAATAACAGAAAAGAAAATGAGCTTTTTGATAAAGTTATTTCTGTCACCGTAGAGAATAATCTGGGATCAACTGAAGCATCCATTGAAAATCTGCAGAAGAAAATTGCCGAGAAGTTACAAGTGGATCTTAATAACTCACCGGGGAGTAGAGCAGACACATTGGGGAGGGCACTGAAGAAGTTGAAATTTCTGATCATTTTGGATGATATGTGGACAGAGTTCTCTCTCGAGGCAATTGGGATTCCAAGGCCAAACAAAGTAAATGGATGCAAGCTTATAATTGTGTCTAGATCACTTCCGGTCTGCAGTGACATCCACATTGATAAGAAGTTTGAGATTAAACTTCTATCAGGTACAGATGCAGAAGCATTGTTCGAGACTGAAGCTGGCATTAAGTTATCACAACTAGGGGATGATACTCGAGCCACAGCAAAGAACATGATAGAGGAACGTGATGGTTTTCCTTTGGCAATTATCTTGCTGGCACGAGCCTTGAGAGAATCAAAGACCGACGATGCTGAGGATGTTGATGGTGAATGGAAAAAAGCTTTGACTTGGTTGAAAGAATCTACAGCCCCCTTGGAAAGCATGAATGAGAGGGCATTTGCGCGTCTGAAATATAGCTATGATATGTTGAAGAAAGATGCTCAGCAGTGTTTCCTTTACTGTGCATTATACCCAGCTGGTCATGACATTGAAAAAAAAGAGTTGGTGGAGTATTGGTTTTGGGAGGGTTTATTGGATGGCAGAAAGAGAAGTGGGCAGATCGAAGATATGAAACGAGCAAAAGAGATAATAGATGAGCTGAATGGAGCTCACCTTCTCGAAATAGAAAGTCAAGAAGGTGGCAAAGAATACATCAAGATGAGAAACTTAGTTAGGCACATGGCAGTCCATCTTACCAAGATGAGCCCTGATCAGTTTCTCATCAAAGCAGGGGAGAAGCTTTCTGACTTCCCATCACAAGGTGAGTACTGGTCTGAAGTAGAGAGAGCCTCATTGATGAGAAATGAGTTTAAAGCACTTCGAGAAGAACCCAAGTTTCCCAAGCTATCCACATTACTTCTGCAGCACAATCCCATCACTTTCTTGCATGATAATTTCTTTCGCAGTATGCCTAACATCAAAGTTCTTGACCTTTCTCATACTCATATCTATTCCCTTCCCAAATCAACCTTTTCTAACTTGACAAAACTAAAGGCATTACTGTTGCGAAATTGTCAGAACTTACACACTCTACCTTCTTTGTCAACCTCTAAGAAAATACTTGTTCTTGACCTTTCTGATACTCCCATAACACGATTGCCGGATGGGATGAAGCAACTAACCAGCCTTATTCGCCTAAACTTGTCTCGTACCAATGTGGGAGAACTCGAAGCTGAACTAGTGTACGCATTGCAACGTCTGAAAGAACTGCTAATGATAACGAATGATGCAGGTTCTCTGTGGGGATCAACCAAAGGAGCAAGTGTTAAGGAGCTGGGAGCCCTTTCGCACTTAGCTATACTTCACATCAACTTTGTAGATGCAGAAGCGTTTAATAGATATGTCAATTCAAGGAATCATTCTCTGTCCAAGTTCAAATTCTGTGTCGGTGGTTCTTGTAAGAAGCCGTTACCTGATAACAGCATAGCCTTCATCAATAGTAACATCCTTGTGAAAGGAAAACCAGTCTCACTGCCTGAAGACACATCGGAGCTGCATGTAATGAGAAATTTGGATCTGCGTTGCTTGCCAAGTTGTTGCTTAGACAGCTTGAAGGTCATCAACATATCTGGCTGTGAAAGTCTGGTCTATTTATTCAACATTAACATGGTGTACAACCTTCCAAACCTGGAAACAATTTCAGTTGAAAAATGTCGGAAGATGGAGGCACTGATAGAGTGGTCAGAATATCCTGATGATTCACTTCATTCAAAGAACCTAAAGTTCATCCATATCTCTGACTGTGAAAAGTTGGTCTACTTATTCAGAAGTGAGATGCTGAGATTCATGCCAAATCTTCAAGAAATCTCCATCCGACGGCGCCAGTTATCAACTGAAGTGGGAAAGGAGCCATATGATCCTCCTGCTATTCATCCAAGATTACAGGACCGTTTGTTTGTTGATCCACTTAAATTGAAGAGCATTTATAGTAATGTACAAATGGAGGGTAACTCTCAGCAAACCATCTGGAACTTTCCTGAACTGAAAATGCACATCATAACTTCTCTCCCACCCAAGCCAAGGAATACGAGTGGCGCAAACCAGTTGCAAAGGAATCGCAGCTTTGAGTCTGTACTAGAGGCTCAGACTAAAAAAAGAGAGTCTATACTGGAGGAAGCACCGATCGCATGTGGTATATTATCAAGAACAGTCGGAAGAAATGATAAAATTGTATACTCTCCTCAACTTTCTCCTCGCGGTCGTGATGTTCAGAGCATTATACAGAGGGGGAATGAGTTCCGTTTTGATTATCCGGCTCCACGGATCAGGATGAGCATGTTATCTAGCGCACCAGTAGCTGCTAGCCCAGCATTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

1050

Amino Acids

118.75

Weight (kDa)

7.71

Isoelectric Point (pI)

45.76

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NB-ARC PF00931 161 - 339 9.8e-22 NB-ARC domain
WHD_DRP PF23559 435 - 507 3.9e-07 Disease resistance protein Winged helix domain
LRR_8 PF13855 559 - 618 1.1e-11 Leucine rich repeat
LRR_14 PF23598 579 - 740 2.1e-08 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 908
Acc36I ACCTGC 2 cut(s) 204, 2057
AccB1I GGYRCC 2 cut(s) 449, 2655
AccI GTMKAC 3 cut(s) 316, 2592, 3009
AccII CGCG 2 cut(s) 1240, 3033
AciI CCGC 1 cut(s) 3033
AclWI GGATC 8 cut(s) 77, 703, 762, 2089, 2358, 2687, 2732, 3107
AcoI YGGCCR 1 cut(s) 436
AcsI RAATTY 6 cut(s) 150, 254, 280, 815, 2213, 2344
AcuI CTGAAG 7 cut(s) 597, 723, 824, 1032, 1632, 2334, 2691
AcyI GRCGYC 1 cut(s) 2656
AdeI CACNNNGTG 1 cut(s) 1598
AfaI GTAC 7 cut(s) 985, 1604, 1987, 2021, 2450, 2772, 2910
AfiI CCNNNNNNNGG 4 cut(s) 327, 1595, 2652, 2856
AflIII ACRYGT 1 cut(s) 532
AhlI ACTAGT 1 cut(s) 2014
AjnI CCWGG 2 cut(s) 159, 2463
AjuI GAANNNNNNNTTGG 2 cut(s) 2198, 2230
Alw21I GWGCWC 1 cut(s) 1447
Alw26I GTCTC 3 cut(s) 1001, 1986, 2308
AlwI GGATC 8 cut(s) 77, 703, 762, 2089, 2358, 2687, 2732, 3107
AlwNI CAGNNNCTG 1 cut(s) 3134
Ama87I CYCGRG 2 cut(s) 857, 1050
AoxI GGCC 2 cut(s) 436, 878
ApeKI GCWGC 5 cut(s) 473, 1699, 2329, 2895, 3134
ApoI RAATTY 6 cut(s) 150, 254, 280, 815, 2213, 2344
ArsI GACNNNNNNTTYG 6 cut(s) 266, 298, 2205, 2237, 2714, 2746
AseI ATTAAT 1 cut(s) 411
Asp700I GAANNNNTTC 1 cut(s) 3071
AspLEI GCGC 4 cut(s) 1240, 2658, 2873, 3125
AspS9I GGNCC 1 cut(s) 2722
AsuC2I CCSGG 1 cut(s) 771
AsuHPI GGTGA 8 cut(s) 60, 220, 410, 667, 759, 1175, 1439, 1610
AsuNHI GCTAGC 1 cut(s) 3137
AvaI CYCGRG 2 cut(s) 857, 1050
AvaII GGWCC 1 cut(s) 2722
BaeGI GKGCMC 1 cut(s) 802
BaeI ACNNNNGTAYC 2 cut(s) 48, 81
BalI TGGCCA 1 cut(s) 438
BanI GGYRCC 2 cut(s) 449, 2655
BanII GRGCYC 3 cut(s) 1447, 1544, 2119
BauI CACGAG 1 cut(s) 1116
BbsI GAAGAC 2 cut(s) 25, 2322
Bbv12I GWGCWC 1 cut(s) 1447
BbvCI CCTCAGC 1 cut(s) 1149
BbvI GCAGC 5 cut(s) 485, 1711, 2316, 2907, 3121
BceAI ACGGC 2 cut(s) 2227, 2669
BcgI CGANNNNNNTGC 2 cut(s) 2873, 2907
BciT130I CCWGG 2 cut(s) 161, 2465
BciVI GTATCC 1 cut(s) 238
BclI TGATCA 2 cut(s) 822, 1546
BcnI CCSGG 1 cut(s) 771
BcoDI GTCTC 3 cut(s) 1001, 1986, 2308
BcuI ACTAGT 1 cut(s) 2014
BfaI CTAG 6 cut(s) 918, 1037, 2015, 2912, 3120, 3138
BfmI CTRYAG 6 cut(s) 48, 325, 722, 934, 1200, 1697
BfoI RGCGCY 1 cut(s) 2659
BfuAI ACCTGC 2 cut(s) 204, 2057
BfuI GTATCC 1 cut(s) 238
BisI GCNGC 5 cut(s) 474, 1700, 2330, 2896, 3135
BlpI GCTNAGC 1 cut(s) 1278
BlsI GCNGC 5 cut(s) 475, 1701, 2331, 2897, 3136
BmcAI AGTACT 1 cut(s) 1604
Bme1390I CCNGG 3 cut(s) 161, 771, 2465
Bme18I GGWCC 1 cut(s) 2722
BmeT110I CYCGRG 2 cut(s) 857, 1050
BmgT120I GGNCC 1 cut(s) 2722
BmiI GGNNCC 5 cut(s) 451, 2116, 2657, 2685, 3093
BmrFI CCNGG 3 cut(s) 161, 771, 2465
BmsI GCATC 8 cut(s) 716, 887, 979, 1135, 1264, 2053, 2146, 2601
BmtI GCTAGC 1 cut(s) 3141
BpiI GAAGAC 2 cut(s) 25, 2322
BplI GAGNNNNNCTC 4 cut(s) 1610, 1642, 2771, 2803
BpmI CTGGAG 1 cut(s) 2966
Bpu10I CCTNAGC 1 cut(s) 1149
Bpu1102I GCTNAGC 1 cut(s) 1278
BpuEI CTTGAG 3 cut(s) 320, 407, 1144
BpuMI CCSGG 1 cut(s) 771
BsaAI YACGTR 2 cut(s) 80, 533
BsaHI GRCGYC 1 cut(s) 2656
BsaJI CCNNGG 6 cut(s) 195, 770, 875, 1209, 2855, 3095
BsaWI WCCGGW 1 cut(s) 928
BsaXI ACNNNNNCTCC 4 cut(s) 1337, 1367, 2085, 2115
Bsc4I CCNNNNNNNGG 4 cut(s) 327, 1595, 2652, 2856
Bse1I ACTGG 7 cut(s) 239, 1610, 2300, 2659, 2878, 2949, 3128
Bse3DI GCAATG 1 cut(s) 2024
BseBI CCWGG 2 cut(s) 161, 2465
BseDI CCNNGG 6 cut(s) 195, 770, 875, 1209, 2855, 3095
BseLI CCNNNNNNNGG 4 cut(s) 327, 1595, 2652, 2856
BseMI GCAATG 1 cut(s) 2024
BseMII CTCAG 6 cut(s) 633, 1140, 1292, 2606, 2804, 2933
BseNI ACTGG 7 cut(s) 239, 1610, 2300, 2659, 2878, 2949, 3128
BseRI GAGGAG 2 cut(s) 3006, 3018
BseSI GKGCMC 1 cut(s) 802
BseXI GCAGC 5 cut(s) 485, 1711, 2316, 2907, 3121
BseYI CCCAGC 3 cut(s) 1309, 2110, 3142
BsgI GTGCAG 1 cut(s) 366
Bsh1236I CGCG 2 cut(s) 1240, 3033
Bsh1285I CGRYCG 2 cut(s) 2961, 3037
BshFI GGCC 2 cut(s) 438, 880
BshNI GGYRCC 2 cut(s) 449, 2655
BsiEI CGRYCG 2 cut(s) 2961, 3037
BsiHKAI GWGCWC 1 cut(s) 1447
BsiHKCI CYCGRG 2 cut(s) 857, 1050
BsiSI CCGG 4 cut(s) 770, 929, 1937, 3089
BslFI GGGAC 1 cut(s) 538
BslI CCNNNNNNNGG 4 cut(s) 327, 1595, 2652, 2856
BsmAI GTCTC 3 cut(s) 1001, 1986, 2308
BsmFI GGGAC 1 cut(s) 538
BsnI GGCC 2 cut(s) 438, 880
BsoBI CYCGRG 2 cut(s) 857, 1050
Bsp1286I GDGCHC 4 cut(s) 802, 1447, 1544, 2119
Bsp1407I TGTACA 2 cut(s) 2448, 2770
Bsp1720I GCTNAGC 1 cut(s) 1278
BspACI CCGC 1 cut(s) 3033
BspANI GGCC 2 cut(s) 438, 880
BspCNI CTCAG 6 cut(s) 632, 1141, 1291, 2607, 2803, 2932
BspFNI CGCG 2 cut(s) 1240, 3033
BspHI TCATGA 1 cut(s) 1318
BspLI GGNNCC 5 cut(s) 451, 2116, 2657, 2685, 3093
BspMAI CTGCAG 3 cut(s) 726, 938, 1701
BspMI ACCTGC 2 cut(s) 204, 2057
BspOI GCTAGC 1 cut(s) 3141
BspPI GGATC 8 cut(s) 77, 703, 762, 2089, 2358, 2687, 2732, 3107
BspQI GCTCTTC 1 cut(s) 2747
BspT107I GGYRCC 2 cut(s) 449, 2655
BsrDI GCAATG 1 cut(s) 2024
BsrGI TGTACA 2 cut(s) 2448, 2770
BsrI ACTGG 7 cut(s) 239, 1610, 2300, 2659, 2878, 2949, 3128
BssECI CCNNGG 6 cut(s) 195, 770, 875, 1209, 2855, 3095
BssNAI GTATAC 1 cut(s) 3010
BssNI GRCGYC 1 cut(s) 2656
BssSI CACGAG 1 cut(s) 1116
BssT1I CCWWGG 4 cut(s) 195, 875, 1209, 2855
Bst1107I GTATAC 1 cut(s) 3010
Bst2BI CACGAG 1 cut(s) 1116
Bst2UI CCWGG 2 cut(s) 161, 2465
Bst6I CTCTTC 2 cut(s) 483, 2747
BstACI GRCGYC 1 cut(s) 2656
BstAUI TGTACA 2 cut(s) 2448, 2770
BstBAI YACGTR 2 cut(s) 80, 533
BstC8I GCNNGC 5 cut(s) 902, 1018, 1113, 2363, 3139
BstDSI CCRYGG 1 cut(s) 3095
BstENI CCTNNNNNAGG 1 cut(s) 325
BstFNI CGCG 2 cut(s) 1240, 3033
BstH2I RGCGCY 1 cut(s) 2659
BstHHI GCGC 4 cut(s) 1240, 2658, 2873, 3125
BstMAI GTCTC 3 cut(s) 1001, 1986, 2308
BstMCI CGRYCG 2 cut(s) 2961, 3037
BstMWI GCNNNNNNNGC 7 cut(s) 36, 1968, 2362, 2382, 2960, 3131, 3143
BstNI CCWGG 2 cut(s) 161, 2465
BstNSI RCATGY 3 cut(s) 2336, 2967, 3115
BstSCI CCNGG 3 cut(s) 159, 769, 2463
BstSFI CTRYAG 6 cut(s) 48, 325, 722, 934, 1200, 1697
BstSLI GKGCMC 1 cut(s) 802
BstUI CGCG 2 cut(s) 1240, 3033
BstV1I GCAGC 5 cut(s) 485, 1711, 2316, 2907, 3121
BstV2I GAAGAC 2 cut(s) 25, 2322
BstX2I RGATCY 2 cut(s) 754, 2350
BstYI RGATCY 2 cut(s) 754, 2350
BstZ17I GTATAC 1 cut(s) 3010
BsuI GTATCC 1 cut(s) 238
BsuRI GGCC 2 cut(s) 438, 880
BtgI CCRYGG 1 cut(s) 3095
BtsI GCAGTG 3 cut(s) 943, 1289, 2306
BtsIMutI CAGTG 7 cut(s) 468, 489, 800, 943, 1289, 2306, 2504
BveI ACCTGC 2 cut(s) 204, 2057
Cac8I GCNNGC 5 cut(s) 902, 1018, 1113, 2363, 3139
CaiI CAGNNNCTG 1 cut(s) 3134
CciI TCATGA 1 cut(s) 1318
CfoI GCGC 4 cut(s) 1240, 2658, 2873, 3125
Cfr13I GGNCC 1 cut(s) 2722
CseI GACGC 2 cut(s) 19, 1229
Csp6I GTAC 7 cut(s) 984, 1603, 1986, 2020, 2449, 2771, 2909
CspCI CAANNNNNGTGG 8 cut(s) 444, 465, 479, 500, 2655, 2690, 2730, 2765
CviQI GTAC 7 cut(s) 984, 1603, 1986, 2020, 2449, 2771, 2909
DinI GGCGCC 1 cut(s) 2657
DraI TTTAAA 2 cut(s) 222, 1648
DraIII CACNNNGTG 1 cut(s) 1598
EaeI YGGCCR 1 cut(s) 436
Eam1104I CTCTTC 2 cut(s) 483, 2747
EarI CTCTTC 2 cut(s) 483, 2747
Ecl136II GAGCTC 1 cut(s) 1445
Eco130I CCWWGG 4 cut(s) 195, 875, 1209, 2855
Eco24I GRGCYC 3 cut(s) 1447, 1544, 2119
Eco47I GGWCC 1 cut(s) 2722
Eco53kI GAGCTC 1 cut(s) 1445
Eco57I CTGAAG 7 cut(s) 597, 723, 824, 1032, 1632, 2334, 2691
Eco88I CYCGRG 2 cut(s) 857, 1050
EcoICRI GAGCTC 1 cut(s) 1445
EcoNI CCTNNNNNAGG 1 cut(s) 325
EcoRII CCWGG 2 cut(s) 159, 2463
EcoT14I CCWWGG 4 cut(s) 195, 875, 1209, 2855
EcoT38I GRGCYC 3 cut(s) 1447, 1544, 2119
EgeI GGCGCC 1 cut(s) 2657
EheI GGCGCC 1 cut(s) 2657
ErhI CCWWGG 4 cut(s) 195, 875, 1209, 2855
FalI AAGNNNNNCTT 4 cut(s) 114, 146, 741, 773
FaqI GGGAC 1 cut(s) 538
FauNDI CATATG 1 cut(s) 2689
FbaI TGATCA 2 cut(s) 822, 1546
FblI GTMKAC 3 cut(s) 316, 2592, 3009
Fnu4HI GCNGC 5 cut(s) 474, 1700, 2330, 2896, 3135
FriOI GRGCYC 3 cut(s) 1447, 1544, 2119
Fsp4HI GCNGC 5 cut(s) 474, 1700, 2330, 2896, 3135
FspBI CTAG 6 cut(s) 918, 1037, 2015, 2912, 3120, 3138
GlaI GCGC 4 cut(s) 1239, 2657, 2872, 3124
GluI GCNGC 5 cut(s) 474, 1700, 2330, 2896, 3135
GsaI CCCAGC 3 cut(s) 1313, 2114, 3146
GsuI CTGGAG 1 cut(s) 2966
HaeII RGCGCY 1 cut(s) 2659
HaeIII GGCC 2 cut(s) 438, 880
HapII CCGG 4 cut(s) 770, 929, 1937, 3089
HgaI GACGC 2 cut(s) 19, 1229
HhaI GCGC 4 cut(s) 1240, 2658, 2873, 3125
Hin1I GRCGYC 1 cut(s) 2656
Hin6I GCGC 4 cut(s) 1238, 2656, 2871, 3123
HinP1I GCGC 4 cut(s) 1238, 2656, 2871, 3123
HincII GTYRAC 2 cut(s) 378, 1881
HindII GTYRAC 2 cut(s) 378, 1881
HindIII AAGCTT 3 cut(s) 902, 1176, 1574
HpaII CCGG 4 cut(s) 770, 929, 1937, 3089
HphI GGTGA 8 cut(s) 60, 220, 410, 667, 759, 1175, 1439, 1610
Hpy166II GTNNAC 9 cut(s) 77, 317, 378, 843, 1881, 2020, 2449, 2593, 3010
Hpy8I GTNNAC 9 cut(s) 77, 317, 378, 843, 1881, 2020, 2449, 2593, 3010
Hpy99I CGWCG 2 cut(s) 1145, 2655
HpyCH4IV ACGT 4 cut(s) 79, 532, 1081, 2032
HpyF10VI GCNNNNNNNGC 7 cut(s) 36, 1968, 2362, 2382, 2960, 3131, 3143
HpySE526I ACGT 4 cut(s) 79, 532, 1081, 2032
Hsp92I GRCGYC 1 cut(s) 2656
HspAI GCGC 4 cut(s) 1238, 2656, 2871, 3123
KasI GGCGCC 1 cut(s) 2655
Ksp22I TGATCA 2 cut(s) 822, 1546
LguI GCTCTTC 1 cut(s) 2747
LmnI GCTCC 7 cut(s) 1442, 2093, 2107, 2114, 2326, 2683, 3097
Lsp1109I GCAGC 5 cut(s) 485, 1711, 2316, 2907, 3121
LweI GCATC 8 cut(s) 716, 887, 979, 1135, 1264, 2053, 2146, 2601
MaeI CTAG 6 cut(s) 918, 1037, 2015, 2912, 3120, 3138
MaeII ACGT 4 cut(s) 79, 532, 1081, 2032
MfeI CAATTG 1 cut(s) 864
MflI RGATCY 2 cut(s) 754, 2350
MhlI GDGCHC 4 cut(s) 802, 1447, 1544, 2119
MlsI TGGCCA 1 cut(s) 438
MluNI TGGCCA 1 cut(s) 438
Mly113I GGCGCC 1 cut(s) 2656
MlyI GAGTC 5 cut(s) 269, 431, 528, 2912, 2945
MmeI TCCRAC 5 cut(s) 219, 255, 2471, 2674, 2968
Mox20I TGGCCA 1 cut(s) 438
MroXI GAANNNNTTC 1 cut(s) 3071
MscI TGGCCA 1 cut(s) 438
MslI CAYNNNNRTG 4 cut(s) 413, 1493, 2285, 2441
Msp20I TGGCCA 1 cut(s) 438
MspA1I CMGCKG 1 cut(s) 1313
MspI CCGG 4 cut(s) 770, 929, 1937, 3089
MspR9I CCNGG 3 cut(s) 161, 771, 2465
MunI CAATTG 1 cut(s) 864
MvaI CCWGG 2 cut(s) 161, 2465
MvnI CGCG 2 cut(s) 1240, 3033
MwoI GCNNNNNNNGC 7 cut(s) 36, 1968, 2362, 2382, 2960, 3131, 3143
NarI GGCGCC 1 cut(s) 2656
NciI CCSGG 1 cut(s) 771
NdeI CATATG 1 cut(s) 2689
NheI GCTAGC 1 cut(s) 3137
NlaIV GGNNCC 5 cut(s) 451, 2116, 2657, 2685, 3093
NmeAIII GCCGAG 1 cut(s) 763
NmuCI GTSAC 3 cut(s) 330, 673, 938
NspI RCATGY 3 cut(s) 2336, 2967, 3115
PaeR7I CTCGAG 2 cut(s) 857, 1050
PagI TCATGA 1 cut(s) 1318
PciSI GCTCTTC 1 cut(s) 2747
PdmI GAANNNNTTC 1 cut(s) 3071
PfeI GAWTC 7 cut(s) 871, 1130, 1196, 2191, 2534, 2619, 2890
PkrI GCNGC 5 cut(s) 475, 1701, 2331, 2897, 3136
Ple19I CGATCG 1 cut(s) 2961
PleI GAGTC 5 cut(s) 269, 430, 527, 2911, 2944
PluTI GGCGCC 1 cut(s) 2659
PpsI GAGTC 5 cut(s) 269, 430, 527, 2911, 2944
Ppu21I YACGTR 2 cut(s) 80, 533
PshBI ATTAAT 1 cut(s) 411
PsiI TTATAA 1 cut(s) 908
Psp124BI GAGCTC 1 cut(s) 1447
Psp6I CCWGG 2 cut(s) 159, 2463
PspFI CCCAGC 3 cut(s) 1309, 2110, 3142
PspGI CCWGG 2 cut(s) 159, 2463
PspN4I GGNNCC 5 cut(s) 451, 2116, 2657, 2685, 3093
PspPI GGNCC 1 cut(s) 2722
PspXI VCTCGAGB 1 cut(s) 1050
PstI CTGCAG 3 cut(s) 726, 938, 1701
PstNI CAGNNNCTG 1 cut(s) 3134
PsuI RGATCY 2 cut(s) 754, 2350
PvuI CGATCG 1 cut(s) 2961
PvuII CAGCTG 1 cut(s) 1313
RsaI GTAC 7 cut(s) 985, 1604, 1987, 2021, 2450, 2772, 2910
RsaNI GTAC 7 cut(s) 984, 1603, 1986, 2020, 2449, 2771, 2909
RseI CAYNNNNRTG 4 cut(s) 413, 1493, 2285, 2441
SacI GAGCTC 1 cut(s) 1447
SapI GCTCTTC 1 cut(s) 2747
SatI GCNGC 5 cut(s) 474, 1700, 2330, 2896, 3135
Sau96I GGNCC 1 cut(s) 2722
ScaI AGTACT 1 cut(s) 1604
SchI GAGTC 5 cut(s) 269, 431, 528, 2912, 2945
ScrFI CCNGG 3 cut(s) 161, 771, 2465
SduI GDGCHC 4 cut(s) 802, 1447, 1544, 2119
SfaNI GCATC 8 cut(s) 716, 887, 979, 1135, 1264, 2053, 2146, 2601
SfcI CTRYAG 6 cut(s) 48, 325, 722, 934, 1200, 1697
SfoI GGCGCC 1 cut(s) 2657
Sfr274I CTCGAG 2 cut(s) 857, 1050
SinI GGWCC 1 cut(s) 2722
SlaI CTCGAG 2 cut(s) 857, 1050
SmiMI CAYNNNNRTG 4 cut(s) 413, 1493, 2285, 2441
SmlI CTYRAG 5 cut(s) 299, 386, 857, 1050, 1123
SmoI CTYRAG 5 cut(s) 299, 386, 857, 1050, 1123
SpeI ACTAGT 1 cut(s) 2014
SsiI CCGC 1 cut(s) 3033
SspDI GGCGCC 1 cut(s) 2655
SspMI CTAG 6 cut(s) 918, 1037, 2015, 2912, 3120, 3138
SstI GAGCTC 1 cut(s) 1447
StyD4I CCNGG 3 cut(s) 159, 769, 2463
StyI CCWWGG 4 cut(s) 195, 875, 1209, 2855
TaiI ACGT 4 cut(s) 82, 535, 1084, 2035
TaqI TCGA 7 cut(s) 858, 1005, 1051, 1398, 1455, 1657, 2004
TaqII GACCGA 1 cut(s) 1154
TatI WGTACW 4 cut(s) 1602, 2448, 2770, 2908
TfiI GAWTC 7 cut(s) 871, 1130, 1196, 2191, 2534, 2619, 2890
TscAI CASTG 7 cut(s) 468, 489, 807, 943, 1289, 2313, 2511
TseFI GTSAC 3 cut(s) 330, 673, 938
TseI GCWGC 5 cut(s) 473, 1699, 2329, 2895, 3134
Tsp45I GTSAC 3 cut(s) 330, 673, 938
TspDTI ATGAA 8 cut(s) 1235, 1421, 1961, 2257, 2531, 2551, 2611, 2696
TspGWI ACGGA 3 cut(s) 531, 3065, 3112
TspRI CASTG 7 cut(s) 468, 489, 807, 943, 1289, 2313, 2511
VpaK11BI GGWCC 1 cut(s) 2722
VspI ATTAAT 1 cut(s) 411
XagI CCTNNNNNAGG 1 cut(s) 325
XapI RAATTY 6 cut(s) 150, 254, 280, 815, 2213, 2344
XbaI TCTAGA 1 cut(s) 917
XceI RCATGY 3 cut(s) 2336, 2967, 3115
XcmI CCANNNNNNNNNTGG 2 cut(s) 202, 460
XhoI CTCGAG 2 cut(s) 857, 1050
XmiI GTMKAC 3 cut(s) 316, 2592, 3009
XmnI GAANNNNTTC 1 cut(s) 3071
XspI CTAG 6 cut(s) 918, 1037, 2015, 2912, 3120, 3138
ZrmI AGTACT 1 cut(s) 1604
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.