Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5C

Orthogroup ID

OG0002553

Physical Location & Seq

Genomic Coordinates Reverse (-)

4301831 .. 4307110

Gene Structure 5280 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5CG058400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1989 bp

ATGATAGATGAATGTGATGGTTTTCCCATCACAATTATCTTGCTGGCACGAAACTTGAAAGAATTGATGACCAATGATTCTGATGATGTTGATAAAGTATGGAAGACAGCTTTGACTAAGCTGAAGGATTCTCCAGTTCGTTTAGAAAGCATGACTAAGAGGGCATTTACTCGTTTGAAGCATAGTTATGACATGCTGAGTAAAGAAGCTCAGCAATGTTTCCTCTATTGTGCATTGTACCCGTCTGGCCATGAAATCGAAAAAAGAGAGTTGGTGGAGTATTGGTTTTGGGAGGGTTTATTGGATACCAGACAGAGAGATGGAAGGATAGAAGATATGATACAAGCAAAAGAGATCCTCGATGAGCTTGCAGCATCTTACCTTCTGGAAACAGTCAGTCAGGAAGGGGGTAAAGAATCCATTAAGATGCGCAGCTTAGCTAAGCATATGGCAATCCACCTGACCAAAACAAGCCCTCAGTTTCTCACCAAAGCTGGAGAAGAGCTAGAAATGTTTCCTTTGCAAGGGGAGTGGCTTCAAGATGTTGAGAGAGCCTCATTGATGAGAAACCAGTTTAAGTTTCTTCAGGGAGAACCCAAATGGCCCAAGCTAACCACATTACTTCTGCAGCATAACCCCATAGGTTTATACTTGCATGAGAATTTCTTTCGTAGTATGCCTAATCTCAATGTTCTTGACCTTTCTTACACTGATATCACTTCCCTTCCACAGTCATCTTTTTCTAAATTGACAAAACTGAGTGCACTTCTCTTGCATCATTGTCGCAACCTAAAAACCCTACCTTCTTTAGAACAGTCCAAGAAACTCCTTGTTCTTGACCTTTCTGATACTCCTGTAGCAGAATTACCAGCCAGGATGAAGAAAATGACCAAACTTATTCGCCTAAACCTATCTCGCACCAATATTGGTTTTTATTGGGGATCAACCAAGGGAGCACATATCAGCGAGCTGAGATCCTGCCAAAATTTAGCTATTCTGCATGCCAACTTCCTAAATGCAGAAACATTTGTTAGCTATGTTGATAAGCATCTTTGTCCGCCCAGTTTCAGGTTCGGTGCGGGTGGCTCTTGTGAAGAAAAGTTACCTGAAAACAGCATAGTTTTCAAGGGTAACTTCCTAGTGAATGGAGAACCAATCTCACTCCCAGAACACACATCTGAACTGCATGTCATAAGCAATGAGGATCTACCTTGCTTGCAAGTTAATTGTCATCTAAAGAACCTGAAGGTCATTAACATTTGTGACTGCAGATGTTTGGTCCATTTATTCACCATTGACATGTTGGGGGATCTTCCAAACCTTGAAACCATTTTAGTCGAGAAATGTGCAAAGATTGTGAGCTTGATAGAGCCAGAAGAATCTGATGACATGATTAAACCTCATCTGAAACACCTAAAGGTCATTCGTATCTCTGACTGCGAAAGTTTGGTCTACTTATTCAACAATGAGATGCTGCACTACTTCCCAGAGCTGCTAGAGATCTCCATCAAACGATGCCAGATGATAGAAGTTGTAATAGGGTCAAAAGAGCCAAATGTCTACCCTGCAATTCTTCCAAAGTTACAGGAGTTGGTATTGGCTGATTTGCAAGAATTAAAATGCATCTATAATGGAGAAATGAAGTGGAACTCTCGCGAAACAATTTGGAACTGTCCAGCTCTAAAGATGCCAATGATAACTTCTCTACCTGCAGAACTGCTTCACAGGCCAAGTGGGAGTAATCAACTACAAAGGAGTTATAGCTTAGATGGCAAGGAGACTATACTGCTGGACTCGATTAATATCAATGCAGCGGAAGCTCCTGAATCCGTTGGCCCCAAATTTCGTAATGCTGCAAAGGATTTTGAGCCTTCGAGGGTTGTTCAAACCCAGAAGTGGGTATTGACCAAAAAAAAACCCAGAAGTGGGTTGGTAAACTCTGATTCATCCACGACTCGATTCCAACCTCGGCTTCCATTTCGCTGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko04626 map04626

Pfam Domains

Protein Families

LRR_8 NB-ARC

Protein Analysis

662

Amino Acids

75.67

Weight (kDa)

6.69

Isoelectric Point (pI)

49.35

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
WHD_DRP	PF23559	79 - 147	8.3e-08	Disease resistance protein Winged helix domain
LRR_8	PF13855	202 - 262	1.4e-09	Leucine rich repeat
LRR_RPS2	PF23247	469 - 547	1.1e-09	Plant disease resistance protein RPS2-like, leucine-rich repeats

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0002553)

Species	Orthologous Gene IDs
prunus_persica	Prupe.4G038400_v2.0.a1 Prupe.4G038500_v2.0.a1 Prupe.4G038500_v2.0.a1 Prupe.4G038500_v2.0.a1 Prupe.4G038500_v2.0.a1 Prupe.4G038500_v2.0.a1 Prupe.4G109000_v2.0.a1
rosa_chinensis	RchiOBHm_Chr5g0006451 RchiOBHm_Chr5g0006641
rosa_laevigata	RLG00000010123 RLG00000031358 RLG00000031359 RLG00000031409 RLG00000031412 RLG00000031414 RLG00000031415 RLG00000031416
rosa_multiflora	Rmu_co8352783.1_g000001 Rmu_sc0001972.1_g000012 Rmu_sc0001972.1_g000020 Rmu_sc0001972.1_g000021 Rmu_sc0002972.1_g000002 Rmu_sc0008991.1_g000009 Rmu_sc0031143.1_g000001
rosa_roxburghii	Rroxscaffold_1G00069360
rosa_rugosa	Rorug04G0423500 Rorug04G0423600 Rorug04G0423700
rosa_samantha	Rh5AG051300 Rh5AG264900 Rh5AG265100 Rh5BG050100 Rh5BG050300 Rh5BG050400 Rh5CG058400 Rh5CG058900 Rh5CG079700 Rh5DG049500
rosa_wichuraiana	Rw5G005070 Rw5G005310 Rw5G005320

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	431
Acc36I	ACCTGC	1 cut(s)	1717
AccI	GTMKAC	2 cut(s)	1452, 1560
AccII	CGCG	1 cut(s)	1656
AciI	CCGC	3 cut(s)	1058, 1079, 1814
AclWI	GGATC	5 cut(s)	349, 949, 969, 1212, 1317
AcoI	YGGCCR	1 cut(s)	247
AcsI	RAATTY	3 cut(s)	661, 985, 1841
AcuI	CTGAAG	3 cut(s)	143, 569, 1265
AfaI	GTAC	1 cut(s)	239
AfiI	CCNNNNNNNGG	6 cut(s)	524, 1068, 1896, 1897, 1925, 1926
AflIII	ACRYGT	1 cut(s)	1299
AgsI	TTSAA	7 cut(s)	58, 178, 539, 1126, 1325, 1462, 1886
AjnI	CCWGG	1 cut(s)	872
AjuI	GAANNNNNNNTTGG	4 cut(s)	1684, 1716, 1956, 1988
Alw21I	GWGCWC	2 cut(s)	766, 958
Alw26I	GTCTC	1 cut(s)	1772
Alw44I	GTGCAC	1 cut(s)	762
AlwI	GGATC	5 cut(s)	349, 949, 969, 1212, 1317
AoxI	GGCC	4 cut(s)	247, 602, 1727, 1834
ApaLI	GTGCAC	1 cut(s)	762
ApeKI	GCWGC	8 cut(s)	371, 432, 628, 1474, 1492, 1811, 1853, 1983
ApoI	RAATTY	3 cut(s)	661, 985, 1841
ArsI	GACNNNNNNTTYG	2 cut(s)	1434, 1466
AseI	ATTAAT	1 cut(s)	1800
Asp700I	GAANNNNTTC	2 cut(s)	513, 1719
AspLEI	GCGC	1 cut(s)	432
AspS9I	GGNCC	3 cut(s)	603, 1279, 1835
AsuHPI	GGTGA	2 cut(s)	478, 1282
AvaII	GGWCC	1 cut(s)	1279
BaeGI	GKGCMC	1 cut(s)	766
BaeI	ACNNNNGTAYC	2 cut(s)	840, 873
BalI	TGGCCA	1 cut(s)	249
BarI	GAAGNNNNNNTAC	4 cut(s)	324, 356, 1086, 1118
BbsI	GAAGAC	1 cut(s)	110
Bbv12I	GWGCWC	2 cut(s)	766, 958
BbvI	GCAGC	8 cut(s)	383, 444, 640, 1461, 1479, 1823, 1840, 1970
BccI	CCATC	5 cut(s)	11, 35, 314, 1514, 1763
BcgI	CGANNNNNNTGC	6 cut(s)	350, 384, 764, 798, 1328, 1362
BciT130I	CCWGG	1 cut(s)	874
BciVI	GTATCC	1 cut(s)	298
BcoDI	GTCTC	1 cut(s)	1772
BfaI	CTAG	3 cut(s)	506, 1139, 1496
BfmI	CTRYAG	4 cut(s)	626, 855, 1267, 1710
BfuAI	ACCTGC	1 cut(s)	1717
BfuI	GTATCC	1 cut(s)	298
BglII	AGATCT	1 cut(s)	1500
BisI	GCNGC	8 cut(s)	372, 433, 629, 1475, 1493, 1812, 1854, 1984
BlpI	GCTNAGC	3 cut(s)	210, 436, 441
BlsI	GCNGC	8 cut(s)	373, 434, 630, 1476, 1494, 1813, 1855, 1985
Bme1390I	CCNGG	1 cut(s)	874
Bme18I	GGWCC	1 cut(s)	1279
BmgT120I	GGNCC	3 cut(s)	603, 1279, 1835
BmiI	GGNNCC	1 cut(s)	1837
BmrFI	CCNGG	1 cut(s)	874
BmrI	ACTGGG	1 cut(s)	1056
BmsI	GCATC	8 cut(s)	383, 417, 784, 1057, 1461, 1505, 1632, 1677
BmuI	ACTGGG	1 cut(s)	1056
BpiI	GAAGAC	1 cut(s)	110
BplI	GAGNNNNNCTC	2 cut(s)	539, 571
BpmI	CTGGAG	2 cut(s)	117, 516
Bpu1102I	GCTNAGC	3 cut(s)	210, 436, 441
BsaBI	GATNNNNATC	3 cut(s)	1047, 1505, 1802
BsaJI	CCNNGG	2 cut(s)	948, 1967
BsaXI	ACNNNNNCTCC	2 cut(s)	269, 299
Bsc4I	CCNNNNNNNGG	6 cut(s)	524, 1068, 1896, 1897, 1925, 1926
Bse1I	ACTGG	3 cut(s)	134, 571, 1062
Bse3DI	GCAATG	2 cut(s)	221, 1204
Bse8I	GATNNNNATC	3 cut(s)	1047, 1505, 1802
BseBI	CCWGG	1 cut(s)	874
BseDI	CCNNGG	2 cut(s)	948, 1967
BseGI	GGATG	2 cut(s)	882, 1946
BseJI	GATNNNNATC	3 cut(s)	1047, 1505, 1802
BseLI	CCNNNNNNNGG	6 cut(s)	524, 1068, 1896, 1897, 1925, 1926
BseMI	GCAATG	2 cut(s)	221, 1204
BseMII	CTCAG	5 cut(s)	188, 224, 491, 749, 962
BseNI	ACTGG	3 cut(s)	134, 571, 1062
BseSI	GKGCMC	1 cut(s)	766
BseXI	GCAGC	8 cut(s)	383, 444, 640, 1461, 1479, 1823, 1840, 1970
BsgI	GTGCAG	1 cut(s)	1460
Bsh1236I	CGCG	1 cut(s)	1656
BshFI	GGCC	4 cut(s)	249, 604, 1729, 1836
BsiHKAI	GWGCWC	2 cut(s)	766, 958
BslI	CCNNNNNNNGG	6 cut(s)	524, 1068, 1896, 1897, 1925, 1926
BsmAI	GTCTC	1 cut(s)	1772
BsnI	GGCC	4 cut(s)	249, 604, 1729, 1836
Bsp1286I	GDGCHC	2 cut(s)	766, 958
Bsp143I	GATC	6 cut(s)	354, 941, 974, 1204, 1309, 1500
Bsp1720I	GCTNAGC	3 cut(s)	210, 436, 441
Bsp68I	TCGCGA	1 cut(s)	1656
BspACI	CCGC	3 cut(s)	1058, 1079, 1814
BspANI	GGCC	4 cut(s)	249, 604, 1729, 1836
BspCNI	CTCAG	5 cut(s)	189, 223, 490, 750, 963
BspFNI	CGCG	1 cut(s)	1656
BspLI	GGNNCC	1 cut(s)	1837
BspMAI	CTGCAG	3 cut(s)	630, 1271, 1714
BspMI	ACCTGC	1 cut(s)	1717
BspPI	GGATC	5 cut(s)	349, 949, 969, 1212, 1317
BspQI	GCTCTTC	1 cut(s)	495
BsrDI	GCAATG	2 cut(s)	221, 1204
BsrI	ACTGG	3 cut(s)	134, 571, 1062
BssECI	CCNNGG	2 cut(s)	948, 1967
BssMI	GATC	6 cut(s)	354, 941, 974, 1204, 1309, 1500
BssT1I	CCWWGG	1 cut(s)	948
Bst2UI	CCWGG	1 cut(s)	874
Bst4CI	ACNGT	4 cut(s)	394, 732, 816, 1673
Bst6I	CTCTTC	1 cut(s)	495
BstC8I	GCNNGC	5 cut(s)	45, 369, 968, 1002, 1217
BstENI	CCTNNNNNAGG	1 cut(s)	522
BstF5I	GGATG	2 cut(s)	882, 1946
BstFNI	CGCG	1 cut(s)	1656
BstHHI	GCGC	1 cut(s)	432
BstKTI	GATC	6 cut(s)	357, 944, 977, 1207, 1312, 1503
BstMAI	GTCTC	1 cut(s)	1772
BstMBI	GATC	6 cut(s)	354, 941, 974, 1204, 1309, 1500
BstMWI	GCNNNNNNNGC	3 cut(s)	1726, 1770, 1817
BstNI	CCWGG	1 cut(s)	874
BstNSI	RCATGY	4 cut(s)	196, 1004, 1190, 1303
BstSCI	CCNGG	1 cut(s)	872
BstSFI	CTRYAG	4 cut(s)	626, 855, 1267, 1710
BstSLI	GKGCMC	1 cut(s)	766
BstUI	CGCG	1 cut(s)	1656
BstV1I	GCAGC	8 cut(s)	383, 444, 640, 1461, 1479, 1823, 1840, 1970
BstV2I	GAAGAC	1 cut(s)	110
BstX2I	RGATCY	5 cut(s)	354, 974, 1204, 1309, 1500
BstYI	RGATCY	5 cut(s)	354, 974, 1204, 1309, 1500
BsuI	GTATCC	1 cut(s)	298
BsuRI	GGCC	4 cut(s)	249, 604, 1729, 1836
BtsCI	GGATG	2 cut(s)	882, 1946
BtsIMutI	CAGTG	1 cut(s)	708
BtuMI	TCGCGA	1 cut(s)	1656
BveI	ACCTGC	1 cut(s)	1717
Cac8I	GCNNGC	5 cut(s)	45, 369, 968, 1002, 1217
CfoI	GCGC	1 cut(s)	432
Cfr13I	GGNCC	3 cut(s)	603, 1279, 1835
Csp6I	GTAC	1 cut(s)	238
CspCI	CAANNNNNGTGG	2 cut(s)	512, 547
CviAII	CATG	8 cut(s)	151, 193, 251, 656, 1001, 1187, 1300, 1390
CviQI	GTAC	1 cut(s)	238
DpnI	GATC	6 cut(s)	356, 943, 976, 1206, 1311, 1502
DpnII	GATC	6 cut(s)	354, 941, 974, 1204, 1309, 1500
EaeI	YGGCCR	1 cut(s)	247
Eam1104I	CTCTTC	1 cut(s)	495
EarI	CTCTTC	1 cut(s)	495
EciI	GGCGGA	1 cut(s)	1047
Eco130I	CCWWGG	1 cut(s)	948
Eco32I	GATATC	1 cut(s)	715
Eco47I	GGWCC	1 cut(s)	1279
Eco57I	CTGAAG	3 cut(s)	143, 569, 1265
EcoNI	CCTNNNNNAGG	1 cut(s)	522
EcoRII	CCWGG	1 cut(s)	872
EcoRV	GATATC	1 cut(s)	715
EcoT14I	CCWWGG	1 cut(s)	948
EcoT22I	ATGCAT	1 cut(s)	1625
ErhI	CCWWGG	1 cut(s)	948
FaeI	CATG	8 cut(s)	154, 196, 254, 659, 1004, 1190, 1303, 1393
FalI	AAGNNNNNCTT	2 cut(s)	1118, 1150
FatI	CATG	8 cut(s)	150, 192, 250, 655, 1000, 1186, 1299, 1389
FauI	CCCGC	1 cut(s)	1072
FauNDI	CATATG	1 cut(s)	447
FblI	GTMKAC	2 cut(s)	1452, 1560
Fnu4HI	GCNGC	8 cut(s)	372, 433, 629, 1475, 1493, 1812, 1854, 1984
FokI	GGATG	2 cut(s)	889, 1933
Fsp4HI	GCNGC	8 cut(s)	372, 433, 629, 1475, 1493, 1812, 1854, 1984
FspBI	CTAG	3 cut(s)	506, 1139, 1496
FspI	TGCGCA	1 cut(s)	431
GlaI	GCGC	1 cut(s)	431
GluI	GCNGC	8 cut(s)	372, 433, 629, 1475, 1493, 1812, 1854, 1984
GsuI	CTGGAG	2 cut(s)	117, 516
HaeIII	GGCC	4 cut(s)	249, 604, 1729, 1836
HhaI	GCGC	1 cut(s)	432
Hin1II	CATG	8 cut(s)	154, 196, 254, 659, 1004, 1190, 1303, 1393
Hin6I	GCGC	1 cut(s)	430
HinP1I	GCGC	1 cut(s)	430
HinfI	GANTC	9 cut(s)	77, 128, 416, 1379, 1793, 1826, 1943, 1954, 1959
HphI	GGTGA	2 cut(s)	478, 1282
Hpy166II	GTNNAC	4 cut(s)	764, 1453, 1561, 1936
Hpy188I	TCNGA	7 cut(s)	82, 847, 1180, 1384, 1407, 1435, 1942
Hpy188III	TCNNGA	8 cut(s)	386, 401, 539, 695, 836, 1339, 1655, 1823
Hpy8I	GTNNAC	4 cut(s)	764, 1453, 1561, 1936
HpyAV	CCTTC	8 cut(s)	118, 318, 392, 398, 734, 813, 1240, 1881
HpyCH4III	ACNGT	4 cut(s)	394, 732, 816, 1673
HpyF10VI	GCNNNNNNNGC	3 cut(s)	1726, 1770, 1817
Hsp92II	CATG	8 cut(s)	154, 196, 254, 659, 1004, 1190, 1303, 1393
HspAI	GCGC	1 cut(s)	430
Kzo9I	GATC	6 cut(s)	354, 941, 974, 1204, 1309, 1500
LguI	GCTCTTC	1 cut(s)	495
LmnI	GCTCC	2 cut(s)	953, 1825
Lsp1109I	GCAGC	8 cut(s)	383, 444, 640, 1461, 1479, 1823, 1840, 1970
LweI	GCATC	8 cut(s)	383, 417, 784, 1057, 1461, 1505, 1632, 1677
MaeI	CTAG	3 cut(s)	506, 1139, 1496
MaeIII	GTNAC	4 cut(s)	1101, 1130, 1262, 1581
MalI	GATC	6 cut(s)	356, 943, 976, 1206, 1311, 1502
MboI	GATC	6 cut(s)	354, 941, 974, 1204, 1309, 1500
MboII	GAAGA	9 cut(s)	115, 344, 512, 575, 892, 1106, 1304, 1388, 1565
MflI	RGATCY	5 cut(s)	354, 974, 1204, 1309, 1500
MhlI	GDGCHC	2 cut(s)	766, 958
MlsI	TGGCCA	1 cut(s)	249
MluNI	TGGCCA	1 cut(s)	249
MlyI	GAGTC	2 cut(s)	1787, 1948
MmeI	TCCRAC	1 cut(s)	1987
Mox20I	TGGCCA	1 cut(s)	249
Mph1103I	ATGCAT	1 cut(s)	1625
MroXI	GAANNNNTTC	2 cut(s)	513, 1719
MscI	TGGCCA	1 cut(s)	249
MseI	TTAA	7 cut(s)	423, 576, 1224, 1254, 1395, 1616, 1800
MslI	CAYNNNNRTG	3 cut(s)	186, 425, 1298
Msp20I	TGGCCA	1 cut(s)	249
MspA1I	CMGCKG	1 cut(s)	1814
MspR9I	CCNGG	1 cut(s)	874
MvaI	CCWGG	1 cut(s)	874
MvnI	CGCG	1 cut(s)	1656
MwoI	GCNNNNNNNGC	3 cut(s)	1726, 1770, 1817
NdeI	CATATG	1 cut(s)	447
NdeII	GATC	6 cut(s)	354, 941, 974, 1204, 1309, 1500
NlaIII	CATG	8 cut(s)	154, 196, 254, 659, 1004, 1190, 1303, 1393
NlaIV	GGNNCC	1 cut(s)	1837
NmeAIII	GCCGAG	1 cut(s)	1948
NmuCI	GTSAC	1 cut(s)	1262
NruI	TCGCGA	1 cut(s)	1656
NsbI	TGCGCA	1 cut(s)	431
NsiI	ATGCAT	1 cut(s)	1625
NspI	RCATGY	4 cut(s)	196, 1004, 1190, 1303
PaeI	GCATGC	1 cut(s)	1004
PciI	ACATGT	1 cut(s)	1299
PciSI	GCTCTTC	1 cut(s)	495
PdmI	GAANNNNTTC	2 cut(s)	513, 1719
PfeI	GAWTC	7 cut(s)	77, 128, 416, 1379, 1826, 1943, 1959
PkrI	GCNGC	8 cut(s)	373, 434, 630, 1476, 1494, 1813, 1855, 1985
PleI	GAGTC	2 cut(s)	1787, 1948
PpsI	GAGTC	2 cut(s)	1787, 1948
PscI	ACATGT	1 cut(s)	1299
PshBI	ATTAAT	1 cut(s)	1800
Psp6I	CCWGG	1 cut(s)	872
PspGI	CCWGG	1 cut(s)	872
PspN4I	GGNNCC	1 cut(s)	1837
PspPI	GGNCC	3 cut(s)	603, 1279, 1835
PstI	CTGCAG	3 cut(s)	630, 1271, 1714
PsuI	RGATCY	5 cut(s)	354, 974, 1204, 1309, 1500
RruI	TCGCGA	1 cut(s)	1656
RsaI	GTAC	1 cut(s)	239
RsaNI	GTAC	1 cut(s)	238
RseI	CAYNNNNRTG	3 cut(s)	186, 425, 1298
SapI	GCTCTTC	1 cut(s)	495
SaqAI	TTAA	7 cut(s)	423, 576, 1224, 1254, 1395, 1616, 1800
SatI	GCNGC	8 cut(s)	372, 433, 629, 1475, 1493, 1812, 1854, 1984
Sau3AI	GATC	6 cut(s)	354, 941, 974, 1204, 1309, 1500
Sau96I	GGNCC	3 cut(s)	603, 1279, 1835
SchI	GAGTC	2 cut(s)	1787, 1948
ScrFI	CCNGG	1 cut(s)	874
SduI	GDGCHC	2 cut(s)	766, 958
SfaNI	GCATC	8 cut(s)	383, 417, 784, 1057, 1461, 1505, 1632, 1677
SfcI	CTRYAG	4 cut(s)	626, 855, 1267, 1710
SinI	GGWCC	1 cut(s)	1279
SmiMI	CAYNNNNRTG	3 cut(s)	186, 425, 1298
SphI	GCATGC	1 cut(s)	1004
SsiI	CCGC	3 cut(s)	1058, 1079, 1814
SspI	AATATT	1 cut(s)	925
SspMI	CTAG	3 cut(s)	506, 1139, 1496
StyD4I	CCNGG	1 cut(s)	872
StyI	CCWWGG	1 cut(s)	948
TaaI	ACNGT	4 cut(s)	394, 732, 816, 1673
TaqI	TCGA	6 cut(s)	258, 360, 1338, 1796, 1874, 1957
TfiI	GAWTC	7 cut(s)	77, 128, 416, 1379, 1826, 1943, 1959
Tru1I	TTAA	7 cut(s)	423, 576, 1224, 1254, 1395, 1616, 1800
Tru9I	TTAA	7 cut(s)	423, 576, 1224, 1254, 1395, 1616, 1800
TscAI	CASTG	1 cut(s)	715
TseFI	GTSAC	1 cut(s)	1262
TseI	GCWGC	8 cut(s)	371, 432, 628, 1474, 1492, 1811, 1853, 1983
Tsp45I	GTSAC	1 cut(s)	1262
TspDTI	ATGAA	5 cut(s)	24, 267, 893, 1655, 1935
TspGWI	ACGGA	1 cut(s)	1819
TspRI	CASTG	1 cut(s)	715
VneI	GTGCAC	1 cut(s)	762
VpaK11BI	GGWCC	1 cut(s)	1279
VspI	ATTAAT	1 cut(s)	1800
XagI	CCTNNNNNAGG	1 cut(s)	522
XapI	RAATTY	3 cut(s)	661, 985, 1841
XceI	RCATGY	4 cut(s)	196, 1004, 1190, 1303
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1300, 1927
XmiI	GTMKAC	2 cut(s)	1452, 1560
XmnI	GAANNNNTTC	2 cut(s)	513, 1719
XspI	CTAG	3 cut(s)	506, 1139, 1496
Zsp2I	ATGCAT	1 cut(s)	1625

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.