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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G11780 |
| fragaria_vesca | FvH4_1g07060 |
| malus_domestica | MD02G1074500.v1.1 |
| prunus_persica | Prupe.7G213400_v2.0.a1 |
| pyrus_communis | pycom02g05890 pycom15g18070 |
| rosa_chinensis | RchiOBHm_Chr2g0092961 RchiOBHm_Chr4g0406051 RchiOBHm_Chr4g0425381 |
| rosa_laevigata | RLG00000008045 RLG00000016353 RLG00000020789 RLG00000033390 |
| rosa_multiflora | Rmu_co8270331.1_g000001 Rmu_sc0000596.1_g000010 Rmu_sc0000965.1_g000017 Rmu_sc0002862.1_g000003 Rmu_sc0002882.1_g000032 Rmu_sc0003902.1_g000018 Rmu_sc0006662.1_g000006 Rmu_sc0010963.1_g000006 Rmu_sc0012535.1_g000006 |
| rosa_roxburghii | Rroxscaffold_2G00148670 |
| rosa_rugosa | Rorug02G0030700 |
| rosa_samantha | Rh1DG034900 Rh2AG076700 Rh2BG078000 Rh2CG080200 Rh2DG075300 Rh2DG566700 Rh3BG038800 Rh3CG266800 Rh3DG038000 Rh3DG262900 Rh6AG284700 Rh6BG048400 Rh6BG286100 Rh6CG287100 Rh7AG478700 |
| rosa_wichuraiana | Rw2G006950 Rw3G003880 Rw3G021260 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1175 |
| Acc16I | TGCGCA | 1 cut(s) | 1422 |
| Acc36I | ACCTGC | 1 cut(s) | 964 |
| AccI | GTMKAC | 1 cut(s) | 186 |
| AccII | CGCG | 1 cut(s) | 308 |
| AciI | CCGC | 4 cut(s) | 219, 279, 306, 548 |
| AclWI | GGATC | 2 cut(s) | 592, 1044 |
| AcsI | RAATTY | 6 cut(s) | 117, 137, 448, 590, 709, 1499 |
| AcuI | CTGAAG | 1 cut(s) | 885 |
| AfaI | GTAC | 2 cut(s) | 374, 1243 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 62, 253, 805 |
| AflII | CTTAAG | 1 cut(s) | 1207 |
| AflIII | ACRYGT | 1 cut(s) | 618 |
| AjiI | CACGTC | 1 cut(s) | 619 |
| AluBI | AGCT | 5 cut(s) | 179, 298, 317, 1169, 1415 |
| AluI | AGCT | 5 cut(s) | 179, 298, 317, 1169, 1415 |
| Alw21I | GWGCWC | 1 cut(s) | 314 |
| Alw26I | GTCTC | 1 cut(s) | 1344 |
| AlwI | GGATC | 2 cut(s) | 592, 1044 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1277 |
| AoxI | GGCC | 1 cut(s) | 762 |
| ApeKI | GCWGC | 4 cut(s) | 823, 1403, 1415, 1418 |
| ApoI | RAATTY | 6 cut(s) | 117, 137, 448, 590, 709, 1499 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1236 |
| AspLEI | GCGC | 2 cut(s) | 966, 1423 |
| AspS9I | GGNCC | 3 cut(s) | 256, 762, 1548 |
| AsuHPI | GGTGA | 5 cut(s) | 236, 515, 659, 1152, 1396 |
| AvaII | GGWCC | 2 cut(s) | 256, 1548 |
| AxyI | CCTNAGG | 1 cut(s) | 1125 |
| BaeGI | GKGCMC | 1 cut(s) | 1157 |
| BbsI | GAAGAC | 2 cut(s) | 151, 839 |
| Bbv12I | GWGCWC | 1 cut(s) | 314 |
| BbvI | GCAGC | 4 cut(s) | 810, 1390, 1402, 1405 |
| BccI | CCATC | 5 cut(s) | 212, 506, 739, 911, 1058 |
| BceAI | ACGGC | 1 cut(s) | 222 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1343, 1377 |
| BciVI | GTATCC | 1 cut(s) | 1609 |
| BcoDI | GTCTC | 1 cut(s) | 1344 |
| BfaI | CTAG | 1 cut(s) | 1539 |
| BfrI | CTTAAG | 1 cut(s) | 1207 |
| BfuAI | ACCTGC | 1 cut(s) | 964 |
| BfuI | GTATCC | 1 cut(s) | 1609 |
| BisI | GCNGC | 6 cut(s) | 219, 279, 824, 1404, 1416, 1419 |
| BlpI | GCTNAGC | 2 cut(s) | 313, 960 |
| BlsI | GCNGC | 6 cut(s) | 220, 280, 825, 1405, 1417, 1420 |
| Bme18I | GGWCC | 2 cut(s) | 256, 1548 |
| BmgBI | CACGTC | 1 cut(s) | 619 |
| BmgT120I | GGNCC | 3 cut(s) | 256, 762, 1548 |
| BmiI | GGNNCC | 1 cut(s) | 258 |
| BmsI | GCATC | 3 cut(s) | 348, 810, 889 |
| BpiI | GAAGAC | 2 cut(s) | 151, 839 |
| BpmI | CTGGAG | 2 cut(s) | 339, 848 |
| Bpu10I | CCTNAGC | 1 cut(s) | 50 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 313, 960 |
| BpuEI | CTTGAG | 2 cut(s) | 65, 165 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1320 |
| BsaWI | WCCGGW | 1 cut(s) | 779 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 734, 764 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 62, 253, 805 |
| Bse118I | RCCGGY | 1 cut(s) | 1285 |
| Bse1I | ACTGG | 4 cut(s) | 356, 526, 1074, 1254 |
| Bse21I | CCTNAGG | 1 cut(s) | 1125 |
| Bse3DI | GCAATG | 2 cut(s) | 344, 765 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1320 |
| BseGI | GGATG | 6 cut(s) | 150, 438, 573, 825, 1135, 1321 |
| BseJI | GATNNNNATC | 1 cut(s) | 1320 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 62, 253, 805 |
| BseMI | GCAATG | 2 cut(s) | 344, 765 |
| BseMII | CTCAG | 6 cut(s) | 327, 927, 951, 1116, 1269, 1470 |
| BseNI | ACTGG | 4 cut(s) | 356, 526, 1074, 1254 |
| BseRI | GAGGAG | 2 cut(s) | 1057, 1385 |
| BseSI | GKGCMC | 1 cut(s) | 1157 |
| BseXI | GCAGC | 4 cut(s) | 810, 1390, 1402, 1405 |
| BseYI | CCCAGC | 1 cut(s) | 40 |
| Bsh1236I | CGCG | 1 cut(s) | 308 |
| BshFI | GGCC | 1 cut(s) | 764 |
| BsiHKAI | GWGCWC | 1 cut(s) | 314 |
| BsiSI | CCGG | 2 cut(s) | 780, 1286 |
| BslFI | GGGAC | 2 cut(s) | 416, 736 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 62, 253, 805 |
| BsmAI | GTCTC | 1 cut(s) | 1344 |
| BsmBI | CGTCTC | 1 cut(s) | 1344 |
| BsmFI | GGGAC | 2 cut(s) | 416, 736 |
| BsnI | GGCC | 1 cut(s) | 764 |
| Bsp1286I | GDGCHC | 2 cut(s) | 314, 1157 |
| Bsp1407I | TGTACA | 1 cut(s) | 372 |
| Bsp143I | GATC | 5 cut(s) | 584, 1036, 1145, 1198, 1321 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 313, 960 |
| BspACI | CCGC | 4 cut(s) | 219, 279, 306, 548 |
| BspANI | GGCC | 1 cut(s) | 764 |
| BspCNI | CTCAG | 6 cut(s) | 326, 928, 952, 1117, 1270, 1471 |
| BspFNI | CGCG | 1 cut(s) | 308 |
| BspHI | TCATGA | 2 cut(s) | 1003, 1255 |
| BspLI | GGNNCC | 1 cut(s) | 258 |
| BspMI | ACCTGC | 1 cut(s) | 964 |
| BspPI | GGATC | 2 cut(s) | 592, 1044 |
| BspQI | GCTCTTC | 1 cut(s) | 329 |
| BspTI | CTTAAG | 1 cut(s) | 1207 |
| BsrDI | GCAATG | 2 cut(s) | 344, 765 |
| BsrFI | RCCGGY | 1 cut(s) | 1285 |
| BsrGI | TGTACA | 1 cut(s) | 372 |
| BsrI | ACTGG | 4 cut(s) | 356, 526, 1074, 1254 |
| BssAI | RCCGGY | 1 cut(s) | 1285 |
| BssMI | GATC | 5 cut(s) | 584, 1036, 1145, 1198, 1321 |
| Bst4CI | ACNGT | 2 cut(s) | 702, 1136 |
| Bst6I | CTCTTC | 1 cut(s) | 329 |
| BstAFI | CTTAAG | 1 cut(s) | 1207 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 350 |
| BstAUI | TGTACA | 1 cut(s) | 372 |
| BstC8I | GCNNGC | 3 cut(s) | 177, 310, 351 |
| BstDEI | CTNAG | 9 cut(s) | 50, 313, 632, 936, 960, 1125, 1278, 1293, 1479 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 803 |
| BstF5I | GGATG | 6 cut(s) | 150, 438, 573, 825, 1135, 1321 |
| BstFNI | CGCG | 1 cut(s) | 308 |
| BstHHI | GCGC | 2 cut(s) | 966, 1423 |
| BstKTI | GATC | 5 cut(s) | 587, 1039, 1148, 1201, 1324 |
| BstMAI | GTCTC | 1 cut(s) | 1344 |
| BstMBI | GATC | 5 cut(s) | 584, 1036, 1145, 1198, 1321 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 314, 350, 1412 |
| BstNSI | RCATGY | 1 cut(s) | 1364 |
| BstSLI | GKGCMC | 1 cut(s) | 1157 |
| BstUI | CGCG | 1 cut(s) | 308 |
| BstV1I | GCAGC | 4 cut(s) | 810, 1390, 1402, 1405 |
| BstV2I | GAAGAC | 2 cut(s) | 151, 839 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 910 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1125 |
| BsuI | GTATCC | 1 cut(s) | 1609 |
| BsuRI | GGCC | 1 cut(s) | 764 |
| BtgZI | GCGATG | 1 cut(s) | 325 |
| BtrI | CACGTC | 1 cut(s) | 619 |
| BtsCI | GGATG | 6 cut(s) | 150, 438, 573, 825, 1135, 1321 |
| BtsI | GCAGTG | 2 cut(s) | 619, 1017 |
| BtsIMutI | CAGTG | 3 cut(s) | 363, 619, 1017 |
| BveI | ACCTGC | 1 cut(s) | 964 |
| Cac8I | GCNNGC | 3 cut(s) | 177, 310, 351 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1277 |
| CciI | TCATGA | 2 cut(s) | 1003, 1255 |
| CfoI | GCGC | 2 cut(s) | 966, 1423 |
| Cfr10I | RCCGGY | 1 cut(s) | 1285 |
| Cfr13I | GGNCC | 3 cut(s) | 256, 762, 1548 |
| Csp6I | GTAC | 2 cut(s) | 373, 1242 |
| CviAII | CATG | 9 cut(s) | 967, 982, 1004, 1031, 1202, 1228, 1256, 1361, 1396 |
| CviQI | GTAC | 2 cut(s) | 373, 1242 |
| DdeI | CTNAG | 9 cut(s) | 50, 313, 632, 936, 960, 1125, 1278, 1293, 1479 |
| DpnI | GATC | 5 cut(s) | 586, 1038, 1147, 1200, 1323 |
| DpnII | GATC | 5 cut(s) | 584, 1036, 1145, 1198, 1321 |
| Eam1104I | CTCTTC | 1 cut(s) | 329 |
| EarI | CTCTTC | 1 cut(s) | 329 |
| Eco47I | GGWCC | 2 cut(s) | 256, 1548 |
| Eco57I | CTGAAG | 1 cut(s) | 885 |
| Eco81I | CCTNAGG | 1 cut(s) | 1125 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 803 |
| EcoO109I | RGGNCCY | 2 cut(s) | 256, 1548 |
| Esp3I | CGTCTC | 1 cut(s) | 1344 |
| FaeI | CATG | 9 cut(s) | 970, 985, 1007, 1034, 1205, 1231, 1259, 1364, 1399 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 389, 421 |
| FaqI | GGGAC | 2 cut(s) | 416, 736 |
| FatI | CATG | 9 cut(s) | 966, 981, 1003, 1030, 1201, 1227, 1255, 1360, 1395 |
| FblI | GTMKAC | 1 cut(s) | 186 |
| Fnu4HI | GCNGC | 6 cut(s) | 219, 279, 824, 1404, 1416, 1419 |
| FokI | GGATG | 6 cut(s) | 137, 445, 580, 832, 1142, 1328 |
| Fsp4HI | GCNGC | 6 cut(s) | 219, 279, 824, 1404, 1416, 1419 |
| FspBI | CTAG | 1 cut(s) | 1539 |
| FspI | TGCGCA | 1 cut(s) | 1422 |
| GlaI | GCGC | 2 cut(s) | 965, 1422 |
| GluI | GCNGC | 6 cut(s) | 219, 279, 824, 1404, 1416, 1419 |
| GsaI | CCCAGC | 1 cut(s) | 44 |
| GsuI | CTGGAG | 2 cut(s) | 339, 848 |
| HaeIII | GGCC | 1 cut(s) | 764 |
| HapII | CCGG | 2 cut(s) | 780, 1286 |
| HhaI | GCGC | 2 cut(s) | 966, 1423 |
| Hin1II | CATG | 9 cut(s) | 970, 985, 1007, 1034, 1205, 1231, 1259, 1364, 1399 |
| Hin6I | GCGC | 2 cut(s) | 964, 1421 |
| HinP1I | GCGC | 2 cut(s) | 964, 1421 |
| HincII | GTYRAC | 1 cut(s) | 87 |
| HindII | GTYRAC | 1 cut(s) | 87 |
| HinfI | GANTC | 9 cut(s) | 20, 200, 265, 1114, 1120, 1274, 1391, 1532, 1597 |
| HpaI | GTTAAC | 1 cut(s) | 87 |
| HpaII | CCGG | 2 cut(s) | 780, 1286 |
| HphI | GGTGA | 5 cut(s) | 236, 515, 659, 1152, 1396 |
| Hpy166II | GTNNAC | 4 cut(s) | 87, 187, 373, 1079 |
| Hpy188III | TCNNGA | 4 cut(s) | 197, 1004, 1124, 1256 |
| Hpy8I | GTNNAC | 4 cut(s) | 87, 187, 373, 1079 |
| HpyAV | CCTTC | 3 cut(s) | 638, 727, 1526 |
| HpyCH4III | ACNGT | 2 cut(s) | 702, 1136 |
| HpyCH4IV | ACGT | 2 cut(s) | 227, 618 |
| HpyCH4V | TGCA | 8 cut(s) | 175, 476, 492, 680, 1067, 1139, 1364, 1406 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 314, 350, 1412 |
| HpyF3I | CTNAG | 9 cut(s) | 50, 313, 632, 936, 960, 1125, 1278, 1293, 1479 |
| HpySE526I | ACGT | 2 cut(s) | 227, 618 |
| Hsp92II | CATG | 9 cut(s) | 970, 985, 1007, 1034, 1205, 1231, 1259, 1364, 1399 |
| HspAI | GCGC | 2 cut(s) | 964, 1421 |
| KspAI | GTTAAC | 1 cut(s) | 87 |
| Kzo9I | GATC | 5 cut(s) | 584, 1036, 1145, 1198, 1321 |
| LguI | GCTCTTC | 1 cut(s) | 329 |
| LmnI | GCTCC | 2 cut(s) | 358, 1027 |
| Lsp1109I | GCAGC | 4 cut(s) | 810, 1390, 1402, 1405 |
| LweI | GCATC | 3 cut(s) | 348, 810, 889 |
| MaeI | CTAG | 1 cut(s) | 1539 |
| MaeII | ACGT | 2 cut(s) | 227, 618 |
| MaeIII | GTNAC | 6 cut(s) | 614, 656, 844, 997, 1060, 1523 |
| MalI | GATC | 5 cut(s) | 586, 1038, 1147, 1200, 1323 |
| MboI | GATC | 5 cut(s) | 584, 1036, 1145, 1198, 1321 |
| MhlI | GDGCHC | 2 cut(s) | 314, 1157 |
| MlyI | GAGTC | 3 cut(s) | 14, 1268, 1526 |
| MmeI | TCCRAC | 2 cut(s) | 720, 1278 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1236 |
| MseI | TTAA | 8 cut(s) | 14, 86, 396, 554, 752, 1101, 1188, 1208 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1365 |
| MspA1I | CMGCKG | 1 cut(s) | 298 |
| MspCI | CTTAAG | 1 cut(s) | 1207 |
| MspI | CCGG | 2 cut(s) | 780, 1286 |
| MvnI | CGCG | 1 cut(s) | 308 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 314, 350, 1412 |
| NdeII | GATC | 5 cut(s) | 584, 1036, 1145, 1198, 1321 |
| NlaIII | CATG | 9 cut(s) | 970, 985, 1007, 1034, 1205, 1231, 1259, 1364, 1399 |
| NlaIV | GGNNCC | 1 cut(s) | 258 |
| NmeAIII | GCCGAG | 1 cut(s) | 1514 |
| NmuCI | GTSAC | 1 cut(s) | 614 |
| NsbI | TGCGCA | 1 cut(s) | 1422 |
| NspI | RCATGY | 1 cut(s) | 1364 |
| PagI | TCATGA | 2 cut(s) | 1003, 1255 |
| PciSI | GCTCTTC | 1 cut(s) | 329 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 15 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1236 |
| PfeI | GAWTC | 6 cut(s) | 200, 265, 1114, 1120, 1391, 1597 |
| PkrI | GCNGC | 6 cut(s) | 220, 280, 825, 1405, 1417, 1420 |
| PleI | GAGTC | 3 cut(s) | 14, 1268, 1526 |
| PpsI | GAGTC | 3 cut(s) | 14, 1268, 1526 |
| PpuMI | RGGWCCY | 2 cut(s) | 256, 1548 |
| PsiI | TTATAA | 1 cut(s) | 1175 |
| Psp5II | RGGWCCY | 2 cut(s) | 256, 1548 |
| PspFI | CCCAGC | 1 cut(s) | 40 |
| PspN4I | GGNNCC | 1 cut(s) | 258 |
| PspPI | GGNCC | 3 cut(s) | 256, 762, 1548 |
| PspPPI | RGGWCCY | 2 cut(s) | 256, 1548 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 447, 479 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1277 |
| PvuII | CAGCTG | 1 cut(s) | 298 |
| RsaI | GTAC | 2 cut(s) | 374, 1243 |
| RsaNI | GTAC | 2 cut(s) | 373, 1242 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1365 |
| SapI | GCTCTTC | 1 cut(s) | 329 |
| SaqAI | TTAA | 8 cut(s) | 14, 86, 396, 554, 752, 1101, 1188, 1208 |
| SatI | GCNGC | 6 cut(s) | 219, 279, 824, 1404, 1416, 1419 |
| Sau3AI | GATC | 5 cut(s) | 584, 1036, 1145, 1198, 1321 |
| Sau96I | GGNCC | 3 cut(s) | 256, 762, 1548 |
| SchI | GAGTC | 3 cut(s) | 14, 1268, 1526 |
| SduI | GDGCHC | 2 cut(s) | 314, 1157 |
| SfaNI | GCATC | 3 cut(s) | 348, 810, 889 |
| SinI | GGWCC | 2 cut(s) | 256, 1548 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1365 |
| SmlI | CTYRAG | 3 cut(s) | 80, 180, 1207 |
| SmoI | CTYRAG | 3 cut(s) | 80, 180, 1207 |
| SsiI | CCGC | 4 cut(s) | 219, 279, 306, 548 |
| SspMI | CTAG | 1 cut(s) | 1539 |
| TaaI | ACNGT | 2 cut(s) | 702, 1136 |
| TaiI | ACGT | 2 cut(s) | 230, 621 |
| TaqI | TCGA | 3 cut(s) | 18, 198, 268 |
| TaqII | GACCGA | 1 cut(s) | 310 |
| TatI | WGTACW | 1 cut(s) | 372 |
| TauI | GCSGC | 2 cut(s) | 221, 281 |
| TfiI | GAWTC | 6 cut(s) | 200, 265, 1114, 1120, 1391, 1597 |
| Tru1I | TTAA | 8 cut(s) | 14, 86, 396, 554, 752, 1101, 1188, 1208 |
| Tru9I | TTAA | 8 cut(s) | 14, 86, 396, 554, 752, 1101, 1188, 1208 |
| TscAI | CASTG | 3 cut(s) | 363, 619, 1017 |
| TseFI | GTSAC | 1 cut(s) | 614 |
| TseI | GCWGC | 4 cut(s) | 823, 1403, 1415, 1418 |
| Tsp45I | GTSAC | 1 cut(s) | 614 |
| TspGWI | ACGGA | 1 cut(s) | 1474 |
| TspRI | CASTG | 3 cut(s) | 363, 619, 1017 |
| Vha464I | CTTAAG | 1 cut(s) | 1207 |
| VpaK11BI | GGWCC | 2 cut(s) | 256, 1548 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 803 |
| XapI | RAATTY | 6 cut(s) | 117, 137, 448, 590, 709, 1499 |
| XceI | RCATGY | 1 cut(s) | 1364 |
| XmiI | GTMKAC | 1 cut(s) | 186 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1236 |
| XspI | CTAG | 1 cut(s) | 1539 |