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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G11780 |
| fragaria_vesca | FvH4_1g07060 |
| malus_domestica | MD02G1074500.v1.1 |
| prunus_persica | Prupe.7G213400_v2.0.a1 |
| pyrus_communis | pycom02g05890 pycom15g18070 |
| rosa_chinensis | RchiOBHm_Chr2g0092961 RchiOBHm_Chr4g0406051 RchiOBHm_Chr4g0425381 |
| rosa_laevigata | RLG00000008045 RLG00000016353 RLG00000020789 RLG00000033390 |
| rosa_multiflora | Rmu_co8270331.1_g000001 Rmu_sc0000596.1_g000010 Rmu_sc0000965.1_g000017 Rmu_sc0002862.1_g000003 Rmu_sc0002882.1_g000032 Rmu_sc0003902.1_g000018 Rmu_sc0006662.1_g000006 Rmu_sc0010963.1_g000006 Rmu_sc0012535.1_g000006 |
| rosa_roxburghii | Rroxscaffold_2G00148670 |
| rosa_rugosa | Rorug02G0030700 |
| rosa_samantha | Rh1DG034900 Rh2AG076700 Rh2BG078000 Rh2CG080200 Rh2DG075300 Rh2DG566700 Rh3BG038800 Rh3CG266800 Rh3DG038000 Rh3DG262900 Rh6AG284700 Rh6BG048400 Rh6BG286100 Rh6CG287100 Rh7AG478700 |
| rosa_wichuraiana | Rw2G006950 Rw3G003880 Rw3G021260 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 305 |
| AccI | GTMKAC | 2 cut(s) | 15, 42 |
| AccII | CGCG | 1 cut(s) | 173 |
| AciI | CCGC | 4 cut(s) | 20, 48, 105, 607 |
| AclWI | GGATC | 2 cut(s) | 338, 351 |
| AcsI | RAATTY | 2 cut(s) | 277, 424 |
| AcuI | CTGAAG | 1 cut(s) | 541 |
| AgsI | TTSAA | 3 cut(s) | 403, 539, 572 |
| AluBI | AGCT | 4 cut(s) | 8, 127, 146, 549 |
| AluI | AGCT | 4 cut(s) | 8, 127, 146, 549 |
| AlwI | GGATC | 2 cut(s) | 338, 351 |
| Ama87I | CYCGRG | 1 cut(s) | 9 |
| ApeKI | GCWGC | 3 cut(s) | 107, 175, 610 |
| ApoI | RAATTY | 2 cut(s) | 277, 424 |
| AspLEI | GCGC | 1 cut(s) | 175 |
| AspS9I | GGNCC | 1 cut(s) | 94 |
| AsuHPI | GGTGA | 2 cut(s) | 283, 463 |
| AvaI | CYCGRG | 1 cut(s) | 9 |
| AvaII | GGWCC | 1 cut(s) | 94 |
| BamHI | GGATCC | 1 cut(s) | 343 |
| BanII | GRGCYC | 1 cut(s) | 465 |
| BbsI | GAAGAC | 1 cut(s) | 579 |
| BbvI | GCAGC | 3 cut(s) | 94, 162, 597 |
| BccI | CCATC | 3 cut(s) | 41, 452, 470 |
| BfaI | CTAG | 1 cut(s) | 321 |
| BisI | GCNGC | 5 cut(s) | 105, 108, 176, 608, 611 |
| BlpI | GCTNAGC | 1 cut(s) | 142 |
| BlsI | GCNGC | 5 cut(s) | 106, 109, 177, 609, 612 |
| Bme18I | GGWCC | 1 cut(s) | 94 |
| BmeT110I | CYCGRG | 1 cut(s) | 9 |
| BmgT120I | GGNCC | 1 cut(s) | 94 |
| BmiI | GGNNCC | 3 cut(s) | 65, 71, 345 |
| BpiI | GAAGAC | 1 cut(s) | 579 |
| BpmI | CTGGAG | 1 cut(s) | 517 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 142 |
| BseGI | GGATG | 1 cut(s) | 487 |
| BseMII | CTCAG | 2 cut(s) | 156, 478 |
| BseRI | GAGGAG | 2 cut(s) | 124, 461 |
| BseXI | GCAGC | 3 cut(s) | 94, 162, 597 |
| BseYI | CCCAGC | 1 cut(s) | 549 |
| Bsh1236I | CGCG | 1 cut(s) | 173 |
| BsiHKCI | CYCGRG | 1 cut(s) | 9 |
| BsiSI | CCGG | 1 cut(s) | 67 |
| BslFI | GGGAC | 1 cut(s) | 566 |
| BsmFI | GGGAC | 1 cut(s) | 566 |
| BsoBI | CYCGRG | 1 cut(s) | 9 |
| Bsp1286I | GDGCHC | 1 cut(s) | 465 |
| Bsp143I | GATC | 1 cut(s) | 343 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 142 |
| BspACI | CCGC | 4 cut(s) | 20, 48, 105, 607 |
| BspCNI | CTCAG | 2 cut(s) | 155, 477 |
| BspFNI | CGCG | 1 cut(s) | 173 |
| BspLI | GGNNCC | 3 cut(s) | 65, 71, 345 |
| BspPI | GGATC | 2 cut(s) | 338, 351 |
| BssMI | GATC | 1 cut(s) | 343 |
| BstC8I | GCNNGC | 1 cut(s) | 6 |
| BstDEI | CTNAG | 2 cut(s) | 142, 464 |
| BstF5I | GGATG | 1 cut(s) | 487 |
| BstFNI | CGCG | 1 cut(s) | 173 |
| BstHHI | GCGC | 1 cut(s) | 175 |
| BstKTI | GATC | 1 cut(s) | 346 |
| BstMBI | GATC | 1 cut(s) | 343 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 321, 541 |
| BstUI | CGCG | 1 cut(s) | 173 |
| BstV1I | GCAGC | 3 cut(s) | 94, 162, 597 |
| BstV2I | GAAGAC | 1 cut(s) | 579 |
| BstX2I | RGATCY | 1 cut(s) | 343 |
| BstYI | RGATCY | 1 cut(s) | 343 |
| BtsCI | GGATG | 1 cut(s) | 487 |
| BtsIMutI | CAGTG | 1 cut(s) | 472 |
| Cac8I | GCNNGC | 1 cut(s) | 6 |
| CfoI | GCGC | 1 cut(s) | 175 |
| Cfr13I | GGNCC | 1 cut(s) | 94 |
| CviJI | RGCY | 9 cut(s) | 8, 66, 127, 146, 463, 495, 549, 594, 610 |
| CviKI_1 | RGCY | 9 cut(s) | 8, 66, 127, 146, 463, 495, 549, 594, 610 |
| DdeI | CTNAG | 2 cut(s) | 142, 464 |
| DpnI | GATC | 1 cut(s) | 345 |
| DpnII | GATC | 1 cut(s) | 343 |
| Eco24I | GRGCYC | 1 cut(s) | 465 |
| Eco47I | GGWCC | 1 cut(s) | 94 |
| Eco57I | CTGAAG | 1 cut(s) | 541 |
| Eco88I | CYCGRG | 1 cut(s) | 9 |
| EcoT38I | GRGCYC | 1 cut(s) | 465 |
| FaiI | YATR | 2 cut(s) | 296, 305 |
| FaqI | GGGAC | 1 cut(s) | 566 |
| FauI | CCCGC | 1 cut(s) | 27 |
| FblI | GTMKAC | 2 cut(s) | 15, 42 |
| Fnu4HI | GCNGC | 5 cut(s) | 105, 108, 176, 608, 611 |
| FokI | GGATG | 1 cut(s) | 494 |
| FriOI | GRGCYC | 1 cut(s) | 465 |
| Fsp4HI | GCNGC | 5 cut(s) | 105, 108, 176, 608, 611 |
| FspBI | CTAG | 1 cut(s) | 321 |
| GlaI | GCGC | 1 cut(s) | 174 |
| GluI | GCNGC | 5 cut(s) | 105, 108, 176, 608, 611 |
| GsaI | CCCAGC | 1 cut(s) | 553 |
| GsuI | CTGGAG | 1 cut(s) | 517 |
| HapII | CCGG | 1 cut(s) | 67 |
| HhaI | GCGC | 1 cut(s) | 175 |
| Hin6I | GCGC | 1 cut(s) | 173 |
| HinP1I | GCGC | 1 cut(s) | 173 |
| HincII | GTYRAC | 2 cut(s) | 16, 599 |
| HindII | GTYRAC | 2 cut(s) | 16, 599 |
| HinfI | GANTC | 5 cut(s) | 29, 99, 168, 356, 529 |
| HpaII | CCGG | 1 cut(s) | 67 |
| HphI | GGTGA | 2 cut(s) | 283, 463 |
| Hpy166II | GTNNAC | 3 cut(s) | 16, 43, 599 |
| Hpy188I | TCNGA | 1 cut(s) | 63 |
| Hpy188III | TCNNGA | 2 cut(s) | 26, 338 |
| Hpy8I | GTNNAC | 3 cut(s) | 16, 43, 599 |
| Hpy99I | CGWCG | 1 cut(s) | 209 |
| HpyAV | CCTTC | 1 cut(s) | 259 |
| HpyCH4IV | ACGT | 1 cut(s) | 207 |
| HpyCH4V | TGCA | 4 cut(s) | 4, 110, 510, 544 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 321, 541 |
| HpyF3I | CTNAG | 2 cut(s) | 142, 464 |
| HpySE526I | ACGT | 1 cut(s) | 207 |
| HspAI | GCGC | 1 cut(s) | 173 |
| Kzo9I | GATC | 1 cut(s) | 343 |
| LmnI | GCTCC | 2 cut(s) | 63, 151 |
| Lsp1109I | GCAGC | 3 cut(s) | 94, 162, 597 |
| MaeI | CTAG | 1 cut(s) | 321 |
| MaeII | ACGT | 1 cut(s) | 207 |
| MaeIII | GTNAC | 3 cut(s) | 259, 429, 486 |
| MalI | GATC | 1 cut(s) | 345 |
| MboI | GATC | 1 cut(s) | 343 |
| MboII | GAAGA | 3 cut(s) | 265, 286, 584 |
| MflI | RGATCY | 1 cut(s) | 343 |
| MhlI | GDGCHC | 1 cut(s) | 465 |
| MluCI | AATT | 4 cut(s) | 233, 277, 424, 539 |
| MseI | TTAA | 3 cut(s) | 225, 243, 386 |
| MspA1I | CMGCKG | 1 cut(s) | 107 |
| MspI | CCGG | 1 cut(s) | 67 |
| MvnI | CGCG | 1 cut(s) | 173 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 321, 541 |
| NdeII | GATC | 1 cut(s) | 343 |
| NlaIV | GGNNCC | 3 cut(s) | 65, 71, 345 |
| NmuCI | GTSAC | 1 cut(s) | 259 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 177 |
| PfeI | GAWTC | 5 cut(s) | 29, 99, 168, 356, 529 |
| PkrI | GCNGC | 5 cut(s) | 106, 109, 177, 609, 612 |
| PsiI | TTATAA | 1 cut(s) | 305 |
| PspFI | CCCAGC | 1 cut(s) | 549 |
| PspN4I | GGNNCC | 3 cut(s) | 65, 71, 345 |
| PspPI | GGNCC | 1 cut(s) | 94 |
| PsuI | RGATCY | 1 cut(s) | 343 |
| SalI | GTCGAC | 1 cut(s) | 14 |
| SaqAI | TTAA | 3 cut(s) | 225, 243, 386 |
| SatI | GCNGC | 5 cut(s) | 105, 108, 176, 608, 611 |
| Sau3AI | GATC | 1 cut(s) | 343 |
| Sau96I | GGNCC | 1 cut(s) | 94 |
| SduI | GDGCHC | 1 cut(s) | 465 |
| SinI | GGWCC | 1 cut(s) | 94 |
| Sse9I | AATT | 4 cut(s) | 233, 277, 424, 539 |
| SsiI | CCGC | 4 cut(s) | 20, 48, 105, 607 |
| SspMI | CTAG | 1 cut(s) | 321 |
| TaiI | ACGT | 1 cut(s) | 210 |
| TaqI | TCGA | 4 cut(s) | 15, 27, 359, 380 |
| TaqII | GACCGA | 1 cut(s) | 111 |
| TasI | AATT | 4 cut(s) | 233, 277, 424, 539 |
| TauI | GCSGC | 2 cut(s) | 107, 610 |
| TfiI | GAWTC | 5 cut(s) | 29, 99, 168, 356, 529 |
| Tru1I | TTAA | 3 cut(s) | 225, 243, 386 |
| Tru9I | TTAA | 3 cut(s) | 225, 243, 386 |
| TscAI | CASTG | 1 cut(s) | 472 |
| TseFI | GTSAC | 1 cut(s) | 259 |
| TseI | GCWGC | 3 cut(s) | 107, 175, 610 |
| Tsp45I | GTSAC | 1 cut(s) | 259 |
| TspRI | CASTG | 1 cut(s) | 472 |
| VpaK11BI | GGWCC | 1 cut(s) | 94 |
| XapI | RAATTY | 2 cut(s) | 277, 424 |
| XmiI | GTMKAC | 2 cut(s) | 15, 42 |
| XspI | CTAG | 1 cut(s) | 321 |