pycom04g03710

Protein FAR1-RELATED SEQUENCE

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr4
Physical Location & Seq
Reverse (-)
3318172 .. 3320481
2310 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom04g03710.2

Sequence Viewer

Length: 378 bp
ATGCCTGACAAACGTGAAAAAATTGTAAGGCAAAGAGCCGAGACCAGGGTTGGTTGCAGAGCAATGATTTTGGTGAGGAAAGTAACTTCTGGGAAATGGGTTGTCACAAAATTTGTAAAGGAGCACACTCATCCTTTGACACCTGGGAAAGGTCGAAGGGATTGCATTTATGATCAATATCCGAATGAGCATGACAAAATTCGGGAATTATCTCAGCAGTTGGCAATAGAGAAAAAGCGTGCTGCGACCTATAAAAGACATCTGGAACTAATTTTTGAGCACATTGAAGAACACAACGAGAGCCTATCAAAGAAGATCCAACACATAGTAGACAGTGTGAAGGAGATTGAAGGCAAAGAACTGCAAGGACACAGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

126

Amino Acids

14.79

Weight (kDa)

9.62

Isoelectric Point (pI)

48.75

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 330
AclWI GGATC 1 cut(s) 310
AcsI RAATTY 2 cut(s) 110, 198
AfiI CCNNNNNNNGG 2 cut(s) 45, 149
AgsI TTSAA 2 cut(s) 287, 350
AjnI CCWGG 2 cut(s) 44, 142
Alw21I GWGCWC 2 cut(s) 126, 282
Alw26I GTCTC 1 cut(s) 35
AlwI GGATC 1 cut(s) 310
ApeKI GCWGC 1 cut(s) 242
ApoI RAATTY 2 cut(s) 110, 198
AsuHPI GGTGA 1 cut(s) 85
Bbv12I GWGCWC 2 cut(s) 126, 282
BbvI GCAGC 1 cut(s) 229
BcgI CGANNNNNNTGC 2 cut(s) 144, 178
BciT130I CCWGG 2 cut(s) 46, 144
BclI TGATCA 1 cut(s) 172
BcoDI GTCTC 1 cut(s) 35
BisI GCNGC 1 cut(s) 243
BlsI GCNGC 1 cut(s) 244
Bme1390I CCNGG 2 cut(s) 46, 144
BmrFI CCNGG 2 cut(s) 46, 144
BsaBI GATNNNNATC 1 cut(s) 177
BsaI GGTCTC 1 cut(s) 35
BsaJI CCNNGG 2 cut(s) 45, 143
Bsc4I CCNNNNNNNGG 2 cut(s) 45, 149
Bse3DI GCAATG 1 cut(s) 69
Bse8I GATNNNNATC 1 cut(s) 177
BseBI CCWGG 2 cut(s) 46, 144
BseDI CCNNGG 2 cut(s) 45, 143
BseGI GGATG 1 cut(s) 130
BseJI GATNNNNATC 1 cut(s) 177
BseLI CCNNNNNNNGG 2 cut(s) 45, 149
BseMI GCAATG 1 cut(s) 69
BseMII CTCAG 1 cut(s) 227
BseXI GCAGC 1 cut(s) 229
BsiHKAI GWGCWC 2 cut(s) 126, 282
BslI CCNNNNNNNGG 2 cut(s) 45, 149
BsmAI GTCTC 1 cut(s) 35
Bso31I GGTCTC 1 cut(s) 35
Bsp1286I GDGCHC 2 cut(s) 126, 282
Bsp143I GATC 2 cut(s) 172, 315
BspCNI CTCAG 1 cut(s) 226
BspPI GGATC 1 cut(s) 310
BspTNI GGTCTC 1 cut(s) 35
BsrDI GCAATG 1 cut(s) 69
BssECI CCNNGG 2 cut(s) 45, 143
BssMI GATC 2 cut(s) 172, 315
Bst2UI CCWGG 2 cut(s) 46, 144
Bst4CI ACNGT 1 cut(s) 335
BstC8I GCNNGC 1 cut(s) 240
BstDEI CTNAG 1 cut(s) 213
BstENI CCTNNNNNAGG 1 cut(s) 147
BstF5I GGATG 1 cut(s) 130
BstKTI GATC 2 cut(s) 175, 318
BstMAI GTCTC 1 cut(s) 35
BstMBI GATC 2 cut(s) 172, 315
BstNI CCWGG 2 cut(s) 46, 144
BstSCI CCNGG 2 cut(s) 44, 142
BstV1I GCAGC 1 cut(s) 229
BstX2I RGATCY 1 cut(s) 315
BstYI RGATCY 1 cut(s) 315
BtsCI GGATG 1 cut(s) 130
BtsIMutI CAGTG 1 cut(s) 340
Cac8I GCNNGC 1 cut(s) 240
CviAII CATG 1 cut(s) 191
CviJI RGCY 2 cut(s) 38, 303
CviKI_1 RGCY 2 cut(s) 38, 303
DdeI CTNAG 1 cut(s) 213
DpnI GATC 2 cut(s) 174, 317
DpnII GATC 2 cut(s) 172, 315
Eco31I GGTCTC 1 cut(s) 35
EcoNI CCTNNNNNAGG 1 cut(s) 147
EcoRII CCWGG 2 cut(s) 44, 142
FaeI CATG 1 cut(s) 194
FaiI YATR 4 cut(s) 171, 192, 252, 326
FatI CATG 1 cut(s) 190
FbaI TGATCA 1 cut(s) 172
FblI GTMKAC 1 cut(s) 330
Fnu4HI GCNGC 1 cut(s) 243
FokI GGATG 1 cut(s) 117
Fsp4HI GCNGC 1 cut(s) 243
GluI GCNGC 1 cut(s) 243
Hin1II CATG 1 cut(s) 194
HphI GGTGA 1 cut(s) 85
Hpy166II GTNNAC 1 cut(s) 331
Hpy188I TCNGA 1 cut(s) 183
Hpy188III TCNNGA 2 cut(s) 203, 263
Hpy8I GTNNAC 1 cut(s) 331
HpyAV CCTTC 3 cut(s) 150, 334, 344
HpyCH4III ACNGT 1 cut(s) 335
HpyCH4IV ACGT 1 cut(s) 13
HpyCH4V TGCA 3 cut(s) 57, 165, 364
HpyF3I CTNAG 1 cut(s) 213
HpySE526I ACGT 1 cut(s) 13
Hsp92II CATG 1 cut(s) 194
Ksp22I TGATCA 1 cut(s) 172
Kzo9I GATC 2 cut(s) 172, 315
LmnI GCTCC 1 cut(s) 121
LpnPI CCDG 7 cut(s) 18, 31, 58, 75, 129, 156, 248
Lsp1109I GCAGC 1 cut(s) 229
MaeII ACGT 1 cut(s) 13
MaeIII GTNAC 2 cut(s) 82, 103
MalI GATC 2 cut(s) 174, 317
MboI GATC 2 cut(s) 172, 315
MboII GAAGA 2 cut(s) 299, 325
MflI RGATCY 1 cut(s) 315
MhlI GDGCHC 2 cut(s) 126, 282
MluCI AATT 5 cut(s) 21, 110, 198, 206, 270
MmeI TCCRAC 1 cut(s) 343
MnlI CCTC 1 cut(s) 69
MspR9I CCNGG 2 cut(s) 46, 144
MvaI CCWGG 2 cut(s) 46, 144
NdeII GATC 2 cut(s) 172, 315
NlaIII CATG 1 cut(s) 194
NmeAIII GCCGAG 1 cut(s) 64
NmuCI GTSAC 1 cut(s) 103
PkrI GCNGC 1 cut(s) 244
Psp6I CCWGG 2 cut(s) 44, 142
PspGI CCWGG 2 cut(s) 44, 142
PsuI RGATCY 1 cut(s) 315
SatI GCNGC 1 cut(s) 243
Sau3AI GATC 2 cut(s) 172, 315
ScrFI CCNGG 2 cut(s) 46, 144
SduI GDGCHC 2 cut(s) 126, 282
SetI ASST 4 cut(s) 16, 145, 154, 251
Sse9I AATT 5 cut(s) 21, 110, 198, 206, 270
StyD4I CCNGG 2 cut(s) 44, 142
TaaI ACNGT 1 cut(s) 335
TaiI ACGT 1 cut(s) 16
TaqI TCGA 1 cut(s) 154
TasI AATT 5 cut(s) 21, 110, 198, 206, 270
TscAI CASTG 1 cut(s) 340
TseFI GTSAC 1 cut(s) 103
TseI GCWGC 1 cut(s) 242
Tsp45I GTSAC 1 cut(s) 103
TspRI CASTG 1 cut(s) 340
XagI CCTNNNNNAGG 1 cut(s) 147
XapI RAATTY 2 cut(s) 110, 198
XmiI GTMKAC 1 cut(s) 330
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.