pycom07g13690

No description available

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr7
Physical Location & Seq
Forward (+)
15563079 .. 15563366
288 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom07g13690.1

Sequence Viewer

Length: 288 bp
ATGACGGCTGAAACAGTTTCGGCAACAAGAAGTAAGAATGTGCCAGGTGAAAAGCCCCAAGATACAAGGGCTTTTGCAAAGCCATCAGAAAATAAGTTTCCAACAGGTGTATCCAGCGAAAAGCAGCGGGCTGAAGATGGTCAGACTCAAGGGACATATATTGTTGGTGGGTCTGCTTTCGGCTGGAATTTCATTACCTTTGTAGGTGAAGAACCAGTCTACTACGGAATAACAAAGGAGTCATTTCGAGCTAATGGCAGCAAAGAAACAGTTCAGACTATGGAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

96

Amino Acids

10.38

Weight (kDa)

5.5

Isoelectric Point (pI)

37.69

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 219
AciI CCGC 1 cut(s) 127
AcsI RAATTY 1 cut(s) 187
AcuI CTGAAG 1 cut(s) 153
AjnI CCWGG 1 cut(s) 43
AluBI AGCT 1 cut(s) 251
AluI AGCT 1 cut(s) 251
ApeKI GCWGC 2 cut(s) 124, 258
ApoI RAATTY 1 cut(s) 187
Asp700I GAANNNNTTC 1 cut(s) 270
AsuHPI GGTGA 2 cut(s) 59, 218
BaeI ACNNNNGTAYC 2 cut(s) 93, 126
BbvI GCAGC 2 cut(s) 136, 270
BccI CCATC 2 cut(s) 91, 131
BceAI ACGGC 1 cut(s) 21
BciT130I CCWGG 1 cut(s) 45
BciVI GTATCC 1 cut(s) 121
BfuI GTATCC 1 cut(s) 121
BisI GCNGC 2 cut(s) 125, 259
BlsI GCNGC 2 cut(s) 126, 260
Bme1390I CCNGG 1 cut(s) 45
BmrFI CCNGG 1 cut(s) 45
BpuEI CTTGAG 1 cut(s) 132
Bse1I ACTGG 1 cut(s) 215
BseBI CCWGG 1 cut(s) 45
BseNI ACTGG 1 cut(s) 215
BseXI GCAGC 2 cut(s) 136, 270
BslFI GGGAC 1 cut(s) 166
BsmFI GGGAC 1 cut(s) 166
BspACI CCGC 1 cut(s) 127
BsrI ACTGG 1 cut(s) 215
Bst2UI CCWGG 1 cut(s) 45
Bst4CI ACNGT 2 cut(s) 16, 271
BstC8I GCNNGC 1 cut(s) 129
BstNI CCWGG 1 cut(s) 45
BstSCI CCNGG 1 cut(s) 43
BstV1I GCAGC 2 cut(s) 136, 270
BsuI GTATCC 1 cut(s) 121
Cac8I GCNNGC 1 cut(s) 129
CviJI RGCY 7 cut(s) 8, 55, 71, 82, 131, 183, 251
CviKI_1 RGCY 7 cut(s) 8, 55, 71, 82, 131, 183, 251
Eco57I CTGAAG 1 cut(s) 153
EcoRII CCWGG 1 cut(s) 43
FaiI YATR 3 cut(s) 157, 159, 281
FaqI GGGAC 1 cut(s) 166
FauI CCCGC 1 cut(s) 120
FblI GTMKAC 1 cut(s) 219
Fnu4HI GCNGC 2 cut(s) 125, 259
Fsp4HI GCNGC 2 cut(s) 125, 259
GluI GCNGC 2 cut(s) 125, 259
HinfI GANTC 2 cut(s) 145, 239
HphI GGTGA 2 cut(s) 59, 218
Hpy166II GTNNAC 1 cut(s) 220
Hpy188I TCNGA 3 cut(s) 88, 144, 276
Hpy8I GTNNAC 1 cut(s) 220
HpyCH4III ACNGT 2 cut(s) 16, 271
HpyCH4V TGCA 1 cut(s) 77
LpnPI CCDG 6 cut(s) 30, 57, 90, 127, 169, 228
Lsp1109I GCAGC 2 cut(s) 136, 270
MboII GAAGA 2 cut(s) 146, 221
MluCI AATT 1 cut(s) 187
MlyI GAGTC 2 cut(s) 139, 248
MmeI TCCRAC 1 cut(s) 125
MroXI GAANNNNTTC 1 cut(s) 270
MspA1I CMGCKG 1 cut(s) 127
MspR9I CCNGG 1 cut(s) 45
MvaI CCWGG 1 cut(s) 45
PdmI GAANNNNTTC 1 cut(s) 270
PkrI GCNGC 2 cut(s) 126, 260
PleI GAGTC 2 cut(s) 139, 247
PpsI GAGTC 2 cut(s) 139, 247
Psp6I CCWGG 1 cut(s) 43
PspGI CCWGG 1 cut(s) 43
SatI GCNGC 2 cut(s) 125, 259
SchI GAGTC 2 cut(s) 139, 248
ScrFI CCNGG 1 cut(s) 45
SetI ASST 5 cut(s) 49, 109, 200, 208, 253
SmlI CTYRAG 1 cut(s) 147
SmoI CTYRAG 1 cut(s) 147
Sse9I AATT 1 cut(s) 187
SsiI CCGC 1 cut(s) 127
StyD4I CCNGG 1 cut(s) 43
TaaI ACNGT 2 cut(s) 16, 271
TaqI TCGA 1 cut(s) 247
TasI AATT 1 cut(s) 187
TseI GCWGC 2 cut(s) 124, 258
TspDTI ATGAA 1 cut(s) 181
TspGWI ACGGA 1 cut(s) 240
XapI RAATTY 1 cut(s) 187
XmiI GTMKAC 1 cut(s) 219
XmnI GAANNNNTTC 1 cut(s) 270
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.