pycom07g13950

No description available

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr7
Physical Location & Seq
Forward (+)
15805538 .. 15805834
297 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom07g13950.1

Sequence Viewer

Length: 297 bp
ATGGGCCGAAGACAAGATTACCATTCAACAGAAACAGTTTCGGCAACAAGAAGTAAGAATGTGCCAGGTGAAAAGCCCCAAGATACAAGGGCTTTTGCAAAGCCATCAGAAAATAAGTTTCCAACAGGTGTATCCAACGAAAAGCAGCGGGCTGAAGATGGTCAGACTCAAGGGACATATATTGTTGGTGGGTCTGCTTTCGGCTGGAATTTCATTACCTTTGTAGGCGAAGAACCAGTCTACTACGGAATAACAAAGGAGTCATTTCGAGCTAATGGCAGCAAAGAAACAGTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

99

Amino Acids

10.84

Weight (kDa)

7.99

Isoelectric Point (pI)

46.2

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 240
AciI CCGC 1 cut(s) 148
AcsI RAATTY 1 cut(s) 208
AcuI CTGAAG 1 cut(s) 174
AgsI TTSAA 1 cut(s) 27
AjnI CCWGG 1 cut(s) 64
AluBI AGCT 1 cut(s) 272
AluI AGCT 1 cut(s) 272
AoxI GGCC 1 cut(s) 4
ApeKI GCWGC 2 cut(s) 145, 279
ApoI RAATTY 1 cut(s) 208
ArsI GACNNNNNNTTYG 2 cut(s) 222, 254
AspS9I GGNCC 1 cut(s) 4
AsuHPI GGTGA 1 cut(s) 80
BaeI ACNNNNGTAYC 2 cut(s) 114, 147
BbsI GAAGAC 1 cut(s) 16
BbvI GCAGC 2 cut(s) 157, 291
BccI CCATC 2 cut(s) 112, 152
BciT130I CCWGG 1 cut(s) 66
BciVI GTATCC 1 cut(s) 142
BfuI GTATCC 1 cut(s) 142
BisI GCNGC 2 cut(s) 146, 280
BlsI GCNGC 2 cut(s) 147, 281
Bme1390I CCNGG 1 cut(s) 66
BmgT120I GGNCC 1 cut(s) 4
BmrFI CCNGG 1 cut(s) 66
BpiI GAAGAC 1 cut(s) 16
BpuEI CTTGAG 1 cut(s) 153
Bse1I ACTGG 1 cut(s) 236
BseBI CCWGG 1 cut(s) 66
BseNI ACTGG 1 cut(s) 236
BseXI GCAGC 2 cut(s) 157, 291
BshFI GGCC 1 cut(s) 6
BslFI GGGAC 1 cut(s) 187
BsmFI GGGAC 1 cut(s) 187
BsnI GGCC 1 cut(s) 6
BspACI CCGC 1 cut(s) 148
BspANI GGCC 1 cut(s) 6
BsrI ACTGG 1 cut(s) 236
Bst2UI CCWGG 1 cut(s) 66
Bst4CI ACNGT 2 cut(s) 37, 292
BstC8I GCNNGC 1 cut(s) 150
BstNI CCWGG 1 cut(s) 66
BstSCI CCNGG 1 cut(s) 64
BstV1I GCAGC 2 cut(s) 157, 291
BstV2I GAAGAC 1 cut(s) 16
BsuI GTATCC 1 cut(s) 142
BsuRI GGCC 1 cut(s) 6
Cac8I GCNNGC 1 cut(s) 150
Cfr13I GGNCC 1 cut(s) 4
CviJI RGCY 7 cut(s) 6, 76, 92, 103, 152, 204, 272
CviKI_1 RGCY 7 cut(s) 6, 76, 92, 103, 152, 204, 272
Eco57I CTGAAG 1 cut(s) 174
EcoRII CCWGG 1 cut(s) 64
FaiI YATR 2 cut(s) 178, 180
FaqI GGGAC 1 cut(s) 187
FauI CCCGC 1 cut(s) 141
FblI GTMKAC 1 cut(s) 240
Fnu4HI GCNGC 2 cut(s) 146, 280
Fsp4HI GCNGC 2 cut(s) 146, 280
GluI GCNGC 2 cut(s) 146, 280
HaeIII GGCC 1 cut(s) 6
HinfI GANTC 2 cut(s) 166, 260
HphI GGTGA 1 cut(s) 80
Hpy166II GTNNAC 1 cut(s) 241
Hpy188I TCNGA 2 cut(s) 109, 165
Hpy8I GTNNAC 1 cut(s) 241
HpyCH4III ACNGT 2 cut(s) 37, 292
HpyCH4V TGCA 1 cut(s) 98
LpnPI CCDG 5 cut(s) 51, 78, 111, 190, 249
Lsp1109I GCAGC 2 cut(s) 157, 291
MboII GAAGA 3 cut(s) 21, 167, 242
MluCI AATT 1 cut(s) 208
MlyI GAGTC 2 cut(s) 160, 269
MmeI TCCRAC 2 cut(s) 146, 159
MspA1I CMGCKG 1 cut(s) 148
MspR9I CCNGG 1 cut(s) 66
MvaI CCWGG 1 cut(s) 66
PkrI GCNGC 2 cut(s) 147, 281
PleI GAGTC 2 cut(s) 160, 268
PpsI GAGTC 2 cut(s) 160, 268
Psp6I CCWGG 1 cut(s) 64
PspGI CCWGG 1 cut(s) 64
PspPI GGNCC 1 cut(s) 4
SatI GCNGC 2 cut(s) 146, 280
Sau96I GGNCC 1 cut(s) 4
SchI GAGTC 2 cut(s) 160, 269
ScrFI CCNGG 1 cut(s) 66
SetI ASST 4 cut(s) 70, 130, 221, 274
SmlI CTYRAG 1 cut(s) 168
SmoI CTYRAG 1 cut(s) 168
Sse9I AATT 1 cut(s) 208
SsiI CCGC 1 cut(s) 148
StyD4I CCNGG 1 cut(s) 64
TaaI ACNGT 2 cut(s) 37, 292
TaqI TCGA 1 cut(s) 268
TasI AATT 1 cut(s) 208
TseI GCWGC 2 cut(s) 145, 279
TspDTI ATGAA 1 cut(s) 202
TspGWI ACGGA 1 cut(s) 261
XapI RAATTY 1 cut(s) 208
XmiI GTMKAC 1 cut(s) 240
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.