Auxin-induced protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Auxin_inducible | PF02519 | 83 - 158 | 6.4e-22 | Auxin responsive protein |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 2 cut(s) | 275, 423 |
| AclWI | GGATC | 1 cut(s) | 62 |
| AcsI | RAATTY | 4 cut(s) | 73, 79, 244, 398 |
| AcuI | CTGAAG | 1 cut(s) | 411 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 334, 422 |
| AgsI | TTSAA | 5 cut(s) | 78, 134, 243, 249, 371 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 384, 416 |
| AluBI | AGCT | 4 cut(s) | 6, 96, 260, 389 |
| AluI | AGCT | 4 cut(s) | 6, 96, 260, 389 |
| Alw21I | GWGCWC | 1 cut(s) | 8 |
| AlwI | GGATC | 1 cut(s) | 62 |
| Ama87I | CYCGRG | 1 cut(s) | 123 |
| ApoI | RAATTY | 4 cut(s) | 73, 79, 244, 398 |
| AsuHPI | GGTGA | 1 cut(s) | 323 |
| AvaI | CYCGRG | 1 cut(s) | 123 |
| BanII | GRGCYC | 1 cut(s) | 8 |
| Bbv12I | GWGCWC | 1 cut(s) | 8 |
| BccI | CCATC | 1 cut(s) | 34 |
| BclI | TGATCA | 1 cut(s) | 409 |
| BfaI | CTAG | 2 cut(s) | 116, 156 |
| BfmI | CTRYAG | 1 cut(s) | 439 |
| BglII | AGATCT | 1 cut(s) | 127 |
| BmeT110I | CYCGRG | 1 cut(s) | 123 |
| BmiI | GGNNCC | 2 cut(s) | 191, 339 |
| BmsI | GCATC | 1 cut(s) | 439 |
| BpuEI | CTTGAG | 1 cut(s) | 69 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 334, 422 |
| BseGI | GGATG | 2 cut(s) | 283, 412 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 334, 422 |
| BsiHKAI | GWGCWC | 1 cut(s) | 8 |
| BsiHKCI | CYCGRG | 1 cut(s) | 123 |
| BslFI | GGGAC | 1 cut(s) | 266 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 334, 422 |
| BsmFI | GGGAC | 1 cut(s) | 266 |
| BsoBI | CYCGRG | 1 cut(s) | 123 |
| Bsp1286I | GDGCHC | 1 cut(s) | 8 |
| Bsp143I | GATC | 4 cut(s) | 54, 127, 409, 460 |
| BspACI | CCGC | 2 cut(s) | 275, 423 |
| BspLI | GGNNCC | 2 cut(s) | 191, 339 |
| BspMAI | CTGCAG | 1 cut(s) | 443 |
| BspPI | GGATC | 1 cut(s) | 62 |
| BssMI | GATC | 4 cut(s) | 54, 127, 409, 460 |
| Bst4CI | ACNGT | 1 cut(s) | 234 |
| BstC8I | GCNNGC | 3 cut(s) | 201, 359, 363 |
| BstDEI | CTNAG | 2 cut(s) | 216, 380 |
| BstF5I | GGATG | 2 cut(s) | 283, 412 |
| BstKTI | GATC | 4 cut(s) | 57, 130, 412, 463 |
| BstMBI | GATC | 4 cut(s) | 54, 127, 409, 460 |
| BstSFI | CTRYAG | 1 cut(s) | 439 |
| BstX2I | RGATCY | 1 cut(s) | 127 |
| BstYI | RGATCY | 1 cut(s) | 127 |
| BtsCI | GGATG | 2 cut(s) | 283, 412 |
| Cac8I | GCNNGC | 3 cut(s) | 201, 359, 363 |
| CviJI | RGCY | 5 cut(s) | 6, 96, 260, 361, 389 |
| CviKI_1 | RGCY | 5 cut(s) | 6, 96, 260, 361, 389 |
| DdeI | CTNAG | 2 cut(s) | 216, 380 |
| DpnI | GATC | 4 cut(s) | 56, 129, 411, 462 |
| DpnII | GATC | 4 cut(s) | 54, 127, 409, 460 |
| Ecl136II | GAGCTC | 1 cut(s) | 6 |
| Eco24I | GRGCYC | 1 cut(s) | 8 |
| Eco53kI | GAGCTC | 1 cut(s) | 6 |
| Eco57I | CTGAAG | 1 cut(s) | 411 |
| Eco88I | CYCGRG | 1 cut(s) | 123 |
| EcoICRI | GAGCTC | 1 cut(s) | 6 |
| EcoT38I | GRGCYC | 1 cut(s) | 8 |
| FaiI | YATR | 9 cut(s) | 22, 91, 93, 182, 265, 267, 306, 344, 487 |
| FaqI | GGGAC | 1 cut(s) | 266 |
| FbaI | TGATCA | 1 cut(s) | 409 |
| FokI | GGATG | 2 cut(s) | 290, 399 |
| FriOI | GRGCYC | 1 cut(s) | 8 |
| FspBI | CTAG | 2 cut(s) | 116, 156 |
| HphI | GGTGA | 1 cut(s) | 323 |
| Hpy188III | TCNNGA | 2 cut(s) | 58, 125 |
| Hpy99I | CGWCG | 1 cut(s) | 234 |
| HpyAV | CCTTC | 1 cut(s) | 26 |
| HpyCH4III | ACNGT | 1 cut(s) | 234 |
| HpyCH4V | TGCA | 4 cut(s) | 299, 365, 441, 482 |
| HpyF3I | CTNAG | 2 cut(s) | 216, 380 |
| Ksp22I | TGATCA | 1 cut(s) | 409 |
| Kzo9I | GATC | 4 cut(s) | 54, 127, 409, 460 |
| LmnI | GCTCC | 1 cut(s) | 257 |
| LpnPI | CCDG | 5 cut(s) | 213, 225, 371, 375, 451 |
| LweI | GCATC | 1 cut(s) | 439 |
| MaeI | CTAG | 2 cut(s) | 116, 156 |
| MalI | GATC | 4 cut(s) | 56, 129, 411, 462 |
| MboI | GATC | 4 cut(s) | 54, 127, 409, 460 |
| MboII | GAAGA | 3 cut(s) | 122, 404, 407 |
| MflI | RGATCY | 1 cut(s) | 127 |
| MhlI | GDGCHC | 1 cut(s) | 8 |
| MluCI | AATT | 9 cut(s) | 49, 68, 73, 79, 207, 244, 268, 398, 432 |
| MnlI | CCTC | 3 cut(s) | 132, 175, 362 |
| MseI | TTAA | 2 cut(s) | 71, 144 |
| NdeII | GATC | 4 cut(s) | 54, 127, 409, 460 |
| NlaIV | GGNNCC | 2 cut(s) | 191, 339 |
| PaeR7I | CTCGAG | 1 cut(s) | 123 |
| Psp124BI | GAGCTC | 1 cut(s) | 8 |
| PspN4I | GGNNCC | 2 cut(s) | 191, 339 |
| PstI | CTGCAG | 1 cut(s) | 443 |
| PsuI | RGATCY | 1 cut(s) | 127 |
| SacI | GAGCTC | 1 cut(s) | 8 |
| SaqAI | TTAA | 2 cut(s) | 71, 144 |
| Sau3AI | GATC | 4 cut(s) | 54, 127, 409, 460 |
| SduI | GDGCHC | 1 cut(s) | 8 |
| SetI | ASST | 5 cut(s) | 8, 98, 262, 292, 391 |
| SfaNI | GCATC | 1 cut(s) | 439 |
| SfcI | CTRYAG | 1 cut(s) | 439 |
| Sfr274I | CTCGAG | 1 cut(s) | 123 |
| SlaI | CTCGAG | 1 cut(s) | 123 |
| SmlI | CTYRAG | 3 cut(s) | 84, 123, 475 |
| SmoI | CTYRAG | 3 cut(s) | 84, 123, 475 |
| Sse9I | AATT | 9 cut(s) | 49, 68, 73, 79, 207, 244, 268, 398, 432 |
| SsiI | CCGC | 2 cut(s) | 275, 423 |
| SspMI | CTAG | 2 cut(s) | 116, 156 |
| SstI | GAGCTC | 1 cut(s) | 8 |
| TaaI | ACNGT | 1 cut(s) | 234 |
| TaqI | TCGA | 3 cut(s) | 29, 124, 229 |
| TasI | AATT | 9 cut(s) | 49, 68, 73, 79, 207, 244, 268, 398, 432 |
| Tru1I | TTAA | 2 cut(s) | 71, 144 |
| Tru9I | TTAA | 2 cut(s) | 71, 144 |
| TspDTI | ATGAA | 1 cut(s) | 252 |
| TspGWI | ACGGA | 1 cut(s) | 182 |
| XapI | RAATTY | 4 cut(s) | 73, 79, 244, 398 |
| XhoI | CTCGAG | 1 cut(s) | 123 |
| XspI | CTAG | 2 cut(s) | 116, 156 |