Auxin-induced protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Auxin_inducible | PF02519 | 10 - 74 | 1.9e-23 | Auxin responsive protein |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 188 |
| AclWI | GGATC | 2 cut(s) | 40, 221 |
| AcsI | RAATTY | 1 cut(s) | 164 |
| AcuI | CTGAAG | 1 cut(s) | 177 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 188 |
| AgsI | TTSAA | 1 cut(s) | 121 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 117, 149 |
| AluBI | AGCT | 2 cut(s) | 155, 305 |
| AluI | AGCT | 2 cut(s) | 155, 305 |
| AlwI | GGATC | 2 cut(s) | 40, 221 |
| ApoI | RAATTY | 1 cut(s) | 164 |
| AspLEI | GCGC | 1 cut(s) | 288 |
| BccI | CCATC | 1 cut(s) | 183 |
| BciVI | GTATCC | 1 cut(s) | 164 |
| BfaI | CTAG | 1 cut(s) | 18 |
| BfuI | GTATCC | 1 cut(s) | 164 |
| BmiI | GGNNCC | 1 cut(s) | 105 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 239, 271 |
| BsaJI | CCNNGG | 1 cut(s) | 289 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 188 |
| BseDI | CCNNGG | 1 cut(s) | 289 |
| BseGI | GGATG | 1 cut(s) | 178 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 188 |
| BseMII | CTCAG | 1 cut(s) | 137 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 188 |
| Bsp143I | GATC | 4 cut(s) | 45, 79, 226, 238 |
| BspCNI | CTCAG | 1 cut(s) | 138 |
| BspHI | TCATGA | 1 cut(s) | 338 |
| BspLI | GGNNCC | 1 cut(s) | 105 |
| BspPI | GGATC | 2 cut(s) | 40, 221 |
| BssECI | CCNNGG | 1 cut(s) | 289 |
| BssMI | GATC | 4 cut(s) | 45, 79, 226, 238 |
| BssT1I | CCWWGG | 1 cut(s) | 289 |
| Bst6I | CTCTTC | 1 cut(s) | 240 |
| BstDEI | CTNAG | 1 cut(s) | 146 |
| BstF5I | GGATG | 1 cut(s) | 178 |
| BstHHI | GCGC | 1 cut(s) | 288 |
| BstKTI | GATC | 4 cut(s) | 48, 82, 229, 241 |
| BstMBI | GATC | 4 cut(s) | 45, 79, 226, 238 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 285 |
| BstX2I | RGATCY | 1 cut(s) | 45 |
| BstYI | RGATCY | 1 cut(s) | 45 |
| BsuI | GTATCC | 1 cut(s) | 164 |
| BtsCI | GGATG | 1 cut(s) | 178 |
| CciI | TCATGA | 1 cut(s) | 338 |
| CfoI | GCGC | 1 cut(s) | 288 |
| CviAII | CATG | 1 cut(s) | 339 |
| CviJI | RGCY | 4 cut(s) | 57, 155, 251, 305 |
| CviKI_1 | RGCY | 4 cut(s) | 57, 155, 251, 305 |
| DdeI | CTNAG | 1 cut(s) | 146 |
| DpnI | GATC | 4 cut(s) | 47, 81, 228, 240 |
| DpnII | GATC | 4 cut(s) | 45, 79, 226, 238 |
| Eam1104I | CTCTTC | 1 cut(s) | 240 |
| EarI | CTCTTC | 1 cut(s) | 240 |
| Eco130I | CCWWGG | 1 cut(s) | 289 |
| Eco57I | CTGAAG | 1 cut(s) | 177 |
| EcoRI | GAATTC | 1 cut(s) | 164 |
| EcoT14I | CCWWGG | 1 cut(s) | 289 |
| ErhI | CCWWGG | 1 cut(s) | 289 |
| FaeI | CATG | 1 cut(s) | 342 |
| FaiI | YATR | 3 cut(s) | 72, 115, 340 |
| FatI | CATG | 1 cut(s) | 338 |
| FokI | GGATG | 1 cut(s) | 165 |
| FspBI | CTAG | 1 cut(s) | 18 |
| GlaI | GCGC | 1 cut(s) | 287 |
| HhaI | GCGC | 1 cut(s) | 288 |
| Hin1II | CATG | 1 cut(s) | 342 |
| Hin6I | GCGC | 1 cut(s) | 286 |
| HinP1I | GCGC | 1 cut(s) | 286 |
| HinfI | GANTC | 5 cut(s) | 21, 148, 232, 269, 323 |
| Hpy188I | TCNGA | 5 cut(s) | 11, 43, 170, 231, 302 |
| Hpy188III | TCNNGA | 4 cut(s) | 137, 236, 242, 339 |
| HpyAV | CCTTC | 1 cut(s) | 229 |
| HpyCH4V | TGCA | 2 cut(s) | 65, 207 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 285 |
| HpyF3I | CTNAG | 1 cut(s) | 146 |
| Hsp92II | CATG | 1 cut(s) | 342 |
| HspAI | GCGC | 1 cut(s) | 286 |
| Kzo9I | GATC | 4 cut(s) | 45, 79, 226, 238 |
| LpnPI | CCDG | 1 cut(s) | 122 |
| MaeI | CTAG | 1 cut(s) | 18 |
| MalI | GATC | 4 cut(s) | 47, 81, 228, 240 |
| MboI | GATC | 4 cut(s) | 45, 79, 226, 238 |
| MboII | GAAGA | 5 cut(s) | 100, 170, 173, 257, 332 |
| MflI | RGATCY | 1 cut(s) | 45 |
| MluCI | AATT | 2 cut(s) | 164, 198 |
| MlyI | GAGTC | 2 cut(s) | 157, 241 |
| MmeI | TCCRAC | 1 cut(s) | 55 |
| MnlI | CCTC | 2 cut(s) | 241, 290 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 285 |
| NdeII | GATC | 4 cut(s) | 45, 79, 226, 238 |
| NlaIII | CATG | 1 cut(s) | 342 |
| NlaIV | GGNNCC | 1 cut(s) | 105 |
| PagI | TCATGA | 1 cut(s) | 338 |
| PfeI | GAWTC | 3 cut(s) | 21, 269, 323 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 188 |
| PleI | GAGTC | 2 cut(s) | 156, 240 |
| PpsI | GAGTC | 2 cut(s) | 156, 240 |
| PspN4I | GGNNCC | 1 cut(s) | 105 |
| PsuI | RGATCY | 1 cut(s) | 45 |
| Sau3AI | GATC | 4 cut(s) | 45, 79, 226, 238 |
| SchI | GAGTC | 2 cut(s) | 157, 241 |
| SetI | ASST | 4 cut(s) | 130, 157, 221, 307 |
| Sse9I | AATT | 2 cut(s) | 164, 198 |
| SspMI | CTAG | 1 cut(s) | 18 |
| StyI | CCWWGG | 1 cut(s) | 289 |
| TaqI | TCGA | 1 cut(s) | 82 |
| TasI | AATT | 2 cut(s) | 164, 198 |
| TfiI | GAWTC | 3 cut(s) | 21, 269, 323 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 188 |
| XapI | RAATTY | 1 cut(s) | 164 |
| XspI | CTAG | 1 cut(s) | 18 |