Auxin-induced protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| PB1 | PF00564 | 42 - 89 | 7.2e-09 | PB1 domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 593 |
| AclWI | GGATC | 2 cut(s) | 364, 604 |
| AcuI | CTGAAG | 2 cut(s) | 253, 546 |
| AcyI | GRCGYC | 1 cut(s) | 5 |
| AfaI | GTAC | 4 cut(s) | 148, 282, 331, 406 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 593 |
| AgeI | ACCGGT | 1 cut(s) | 554 |
| AgsI | TTSAA | 2 cut(s) | 79, 607 |
| AhlI | ACTAGT | 1 cut(s) | 371 |
| AjnI | CCWGG | 2 cut(s) | 163, 483 |
| AluBI | AGCT | 3 cut(s) | 83, 318, 401 |
| AluI | AGCT | 3 cut(s) | 83, 318, 401 |
| Alw26I | GTCTC | 1 cut(s) | 383 |
| AlwI | GGATC | 2 cut(s) | 364, 604 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 259 |
| Ama87I | CYCGRG | 1 cut(s) | 333 |
| ApeKI | GCWGC | 1 cut(s) | 253 |
| AsiGI | ACCGGT | 1 cut(s) | 554 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 266 |
| AsuHPI | GGTGA | 1 cut(s) | 215 |
| AvaI | CYCGRG | 1 cut(s) | 333 |
| BauI | CACGAG | 1 cut(s) | 423 |
| BbsI | GAAGAC | 1 cut(s) | 204 |
| BbvI | GCAGC | 1 cut(s) | 265 |
| BccI | CCATC | 2 cut(s) | 337, 563 |
| BciT130I | CCWGG | 2 cut(s) | 165, 485 |
| BcoDI | GTCTC | 1 cut(s) | 383 |
| BcuI | ACTAGT | 1 cut(s) | 371 |
| BfaI | CTAG | 4 cut(s) | 182, 372, 402, 600 |
| BfmI | CTRYAG | 1 cut(s) | 142 |
| BisI | GCNGC | 1 cut(s) | 254 |
| BlsI | GCNGC | 1 cut(s) | 255 |
| BmcAI | AGTACT | 2 cut(s) | 148, 331 |
| Bme1390I | CCNGG | 2 cut(s) | 165, 485 |
| BmeT110I | CYCGRG | 1 cut(s) | 333 |
| BmiI | GGNNCC | 1 cut(s) | 40 |
| BmrFI | CCNGG | 2 cut(s) | 165, 485 |
| BmsI | GCATC | 3 cut(s) | 232, 265, 534 |
| BpiI | GAAGAC | 1 cut(s) | 204 |
| Bsa29I | ATCGAT | 1 cut(s) | 192 |
| BsaHI | GRCGYC | 1 cut(s) | 5 |
| BsaI | GGTCTC | 1 cut(s) | 383 |
| BsaWI | WCCGGW | 1 cut(s) | 554 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 593 |
| Bse118I | RCCGGY | 1 cut(s) | 554 |
| Bse1I | ACTGG | 2 cut(s) | 408, 598 |
| Bse3DI | GCAATG | 2 cut(s) | 252, 471 |
| BseBI | CCWGG | 2 cut(s) | 165, 485 |
| BseCI | ATCGAT | 1 cut(s) | 192 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 593 |
| BseMI | GCAATG | 2 cut(s) | 252, 471 |
| BseMII | CTCAG | 1 cut(s) | 98 |
| BseNI | ACTGG | 2 cut(s) | 408, 598 |
| BseXI | GCAGC | 1 cut(s) | 265 |
| BshTI | ACCGGT | 1 cut(s) | 554 |
| BshVI | ATCGAT | 1 cut(s) | 192 |
| BsiHKCI | CYCGRG | 1 cut(s) | 333 |
| BsiSI | CCGG | 1 cut(s) | 555 |
| BslFI | GGGAC | 1 cut(s) | 74 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 593 |
| BsmAI | GTCTC | 1 cut(s) | 383 |
| BsmFI | GGGAC | 1 cut(s) | 74 |
| BsmI | GAATGC | 1 cut(s) | 467 |
| Bso31I | GGTCTC | 1 cut(s) | 383 |
| BsoBI | CYCGRG | 1 cut(s) | 333 |
| Bsp143I | GATC | 3 cut(s) | 232, 356, 596 |
| BspCNI | CTCAG | 1 cut(s) | 99 |
| BspDI | ATCGAT | 1 cut(s) | 192 |
| BspLI | GGNNCC | 1 cut(s) | 40 |
| BspMAI | CTGCAG | 1 cut(s) | 146 |
| BspPI | GGATC | 2 cut(s) | 364, 604 |
| BspTNI | GGTCTC | 1 cut(s) | 383 |
| BsrDI | GCAATG | 2 cut(s) | 252, 471 |
| BsrFI | RCCGGY | 1 cut(s) | 554 |
| BsrI | ACTGG | 2 cut(s) | 408, 598 |
| BssAI | RCCGGY | 1 cut(s) | 554 |
| BssMI | GATC | 3 cut(s) | 232, 356, 596 |
| BssNI | GRCGYC | 1 cut(s) | 5 |
| BssSI | CACGAG | 1 cut(s) | 423 |
| Bst2BI | CACGAG | 1 cut(s) | 423 |
| Bst2UI | CCWGG | 2 cut(s) | 165, 485 |
| Bst4CI | ACNGT | 2 cut(s) | 203, 499 |
| BstACI | GRCGYC | 1 cut(s) | 5 |
| BstC8I | GCNNGC | 1 cut(s) | 562 |
| BstDEI | CTNAG | 1 cut(s) | 107 |
| BstKTI | GATC | 3 cut(s) | 235, 359, 599 |
| BstMAI | GTCTC | 1 cut(s) | 383 |
| BstMBI | GATC | 3 cut(s) | 232, 356, 596 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 315, 570, 579 |
| BstNI | CCWGG | 2 cut(s) | 165, 485 |
| BstSCI | CCNGG | 2 cut(s) | 163, 483 |
| BstSFI | CTRYAG | 1 cut(s) | 142 |
| BstV1I | GCAGC | 1 cut(s) | 265 |
| BstV2I | GAAGAC | 1 cut(s) | 204 |
| BstX2I | RGATCY | 1 cut(s) | 596 |
| BstYI | RGATCY | 1 cut(s) | 596 |
| Bsu15I | ATCGAT | 1 cut(s) | 192 |
| BsuTUI | ATCGAT | 1 cut(s) | 192 |
| BtsIMutI | CAGTG | 1 cut(s) | 415 |
| Cac8I | GCNNGC | 1 cut(s) | 562 |
| CaiI | CAGNNNCTG | 1 cut(s) | 259 |
| Cfr10I | RCCGGY | 1 cut(s) | 554 |
| ClaI | ATCGAT | 1 cut(s) | 192 |
| CsiI | ACCWGGT | 2 cut(s) | 163, 483 |
| Csp6I | GTAC | 4 cut(s) | 147, 281, 330, 405 |
| CspAI | ACCGGT | 1 cut(s) | 554 |
| CviAII | CATG | 4 cut(s) | 13, 118, 385, 458 |
| CviJI | RGCY | 6 cut(s) | 83, 318, 401, 447, 530, 573 |
| CviKI_1 | RGCY | 6 cut(s) | 83, 318, 401, 447, 530, 573 |
| CviQI | GTAC | 4 cut(s) | 147, 281, 330, 405 |
| DdeI | CTNAG | 1 cut(s) | 107 |
| DpnI | GATC | 3 cut(s) | 234, 358, 598 |
| DpnII | GATC | 3 cut(s) | 232, 356, 596 |
| DraI | TTTAAA | 1 cut(s) | 511 |
| Eco31I | GGTCTC | 1 cut(s) | 383 |
| Eco57I | CTGAAG | 2 cut(s) | 253, 546 |
| Eco88I | CYCGRG | 1 cut(s) | 333 |
| EcoRII | CCWGG | 2 cut(s) | 163, 483 |
| FaeI | CATG | 4 cut(s) | 16, 121, 388, 461 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 433, 465 |
| FaqI | GGGAC | 1 cut(s) | 74 |
| FatI | CATG | 4 cut(s) | 12, 117, 384, 457 |
| Fnu4HI | GCNGC | 1 cut(s) | 254 |
| Fsp4HI | GCNGC | 1 cut(s) | 254 |
| FspBI | CTAG | 4 cut(s) | 182, 372, 402, 600 |
| GluI | GCNGC | 1 cut(s) | 254 |
| HapII | CCGG | 1 cut(s) | 555 |
| Hin1I | GRCGYC | 1 cut(s) | 5 |
| Hin1II | CATG | 4 cut(s) | 16, 121, 388, 461 |
| HincII | GTYRAC | 1 cut(s) | 223 |
| HindII | GTYRAC | 1 cut(s) | 223 |
| HinfI | GANTC | 2 cut(s) | 347, 361 |
| HpaII | CCGG | 1 cut(s) | 555 |
| HphI | GGTGA | 1 cut(s) | 215 |
| Hpy166II | GTNNAC | 1 cut(s) | 223 |
| Hpy188I | TCNGA | 3 cut(s) | 172, 261, 526 |
| Hpy188III | TCNNGA | 2 cut(s) | 271, 425 |
| Hpy8I | GTNNAC | 1 cut(s) | 223 |
| Hpy99I | CGWCG | 1 cut(s) | 230 |
| HpyAV | CCTTC | 3 cut(s) | 277, 459, 478 |
| HpyCH4III | ACNGT | 2 cut(s) | 203, 499 |
| HpyCH4V | TGCA | 5 cut(s) | 144, 245, 419, 476, 582 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 315, 570, 579 |
| HpyF3I | CTNAG | 1 cut(s) | 107 |
| Hsp92I | GRCGYC | 1 cut(s) | 5 |
| Hsp92II | CATG | 4 cut(s) | 16, 121, 388, 461 |
| Kzo9I | GATC | 3 cut(s) | 232, 356, 596 |
| LmnI | GCTCC | 3 cut(s) | 88, 323, 470 |
| LpnPI | CCDG | 9 cut(s) | 22, 150, 177, 256, 421, 470, 497, 568, 579 |
| Lsp1109I | GCAGC | 1 cut(s) | 265 |
| LweI | GCATC | 3 cut(s) | 232, 265, 534 |
| MabI | ACCWGGT | 2 cut(s) | 163, 483 |
| MaeI | CTAG | 4 cut(s) | 182, 372, 402, 600 |
| MaeIII | GTNAC | 1 cut(s) | 211 |
| MalI | GATC | 3 cut(s) | 234, 358, 598 |
| MboI | GATC | 3 cut(s) | 232, 356, 596 |
| MboII | GAAGA | 1 cut(s) | 209 |
| MflI | RGATCY | 1 cut(s) | 596 |
| MlyI | GAGTC | 1 cut(s) | 370 |
| MmeI | TCCRAC | 1 cut(s) | 334 |
| MnlI | CCTC | 4 cut(s) | 52, 63, 123, 243 |
| MroXI | GAANNNNTTC | 1 cut(s) | 266 |
| MseI | TTAA | 3 cut(s) | 51, 489, 510 |
| MslI | CAYNNNNRTG | 1 cut(s) | 555 |
| MspI | CCGG | 1 cut(s) | 555 |
| MspR9I | CCNGG | 2 cut(s) | 165, 485 |
| Mva1269I | GAATGC | 1 cut(s) | 467 |
| MvaI | CCWGG | 2 cut(s) | 165, 485 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 315, 570, 579 |
| NdeII | GATC | 3 cut(s) | 232, 356, 596 |
| NlaIII | CATG | 4 cut(s) | 16, 121, 388, 461 |
| NlaIV | GGNNCC | 1 cut(s) | 40 |
| PaeR7I | CTCGAG | 1 cut(s) | 333 |
| PctI | GAATGC | 1 cut(s) | 467 |
| PdmI | GAANNNNTTC | 1 cut(s) | 266 |
| PfeI | GAWTC | 1 cut(s) | 347 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 593 |
| PinAI | ACCGGT | 1 cut(s) | 554 |
| PkrI | GCNGC | 1 cut(s) | 255 |
| PleI | GAGTC | 1 cut(s) | 369 |
| PpsI | GAGTC | 1 cut(s) | 369 |
| Psp6I | CCWGG | 2 cut(s) | 163, 483 |
| PspGI | CCWGG | 2 cut(s) | 163, 483 |
| PspN4I | GGNNCC | 1 cut(s) | 40 |
| PspXI | VCTCGAGB | 1 cut(s) | 333 |
| PstI | CTGCAG | 1 cut(s) | 146 |
| PstNI | CAGNNNCTG | 1 cut(s) | 259 |
| PsuI | RGATCY | 1 cut(s) | 596 |
| RsaI | GTAC | 4 cut(s) | 148, 282, 331, 406 |
| RsaNI | GTAC | 4 cut(s) | 147, 281, 330, 405 |
| RseI | CAYNNNNRTG | 1 cut(s) | 555 |
| SaqAI | TTAA | 3 cut(s) | 51, 489, 510 |
| SatI | GCNGC | 1 cut(s) | 254 |
| Sau3AI | GATC | 3 cut(s) | 232, 356, 596 |
| ScaI | AGTACT | 2 cut(s) | 148, 331 |
| SchI | GAGTC | 1 cut(s) | 370 |
| ScrFI | CCNGG | 2 cut(s) | 165, 485 |
| SexAI | ACCWGGT | 2 cut(s) | 163, 483 |
| SfaNI | GCATC | 3 cut(s) | 232, 265, 534 |
| SfcI | CTRYAG | 1 cut(s) | 142 |
| Sfr274I | CTCGAG | 1 cut(s) | 333 |
| SlaI | CTCGAG | 1 cut(s) | 333 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 555 |
| SmlI | CTYRAG | 1 cut(s) | 333 |
| SmoI | CTYRAG | 1 cut(s) | 333 |
| SpeI | ACTAGT | 1 cut(s) | 371 |
| SspMI | CTAG | 4 cut(s) | 182, 372, 402, 600 |
| StyD4I | CCNGG | 2 cut(s) | 163, 483 |
| TaaI | ACNGT | 2 cut(s) | 203, 499 |
| TaqI | TCGA | 4 cut(s) | 28, 192, 334, 359 |
| TatI | WGTACW | 3 cut(s) | 146, 280, 329 |
| TfiI | GAWTC | 1 cut(s) | 347 |
| Tru1I | TTAA | 3 cut(s) | 51, 489, 510 |
| Tru9I | TTAA | 3 cut(s) | 51, 489, 510 |
| TscAI | CASTG | 1 cut(s) | 415 |
| TseI | GCWGC | 1 cut(s) | 253 |
| TspDTI | ATGAA | 5 cut(s) | 210, 302, 460, 474, 539 |
| TspRI | CASTG | 1 cut(s) | 415 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 593 |
| XhoI | CTCGAG | 1 cut(s) | 333 |
| XmnI | GAANNNNTTC | 1 cut(s) | 266 |
| XspI | CTAG | 4 cut(s) | 182, 372, 402, 600 |
| ZrmI | AGTACT | 2 cut(s) | 148, 331 |