Auxin-induced protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 65 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 390 |
| AciI | CCGC | 3 cut(s) | 143, 188, 294 |
| AclWI | GGATC | 4 cut(s) | 125, 138, 146, 401 |
| AcsI | RAATTY | 1 cut(s) | 438 |
| AcuI | CTGAAG | 1 cut(s) | 387 |
| AcvI | CACGTG | 1 cut(s) | 329 |
| AcyI | GRCGYC | 2 cut(s) | 66, 191 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 46, 390, 416 |
| AflIII | ACRYGT | 1 cut(s) | 328 |
| AgsI | TTSAA | 3 cut(s) | 121, 375, 506 |
| AhlI | ACTAGT | 1 cut(s) | 452 |
| AleI | CACNNNNGTG | 1 cut(s) | 29 |
| AluBI | AGCT | 3 cut(s) | 185, 223, 316 |
| AluI | AGCT | 3 cut(s) | 185, 223, 316 |
| Alw21I | GWGCWC | 1 cut(s) | 79 |
| Alw26I | GTCTC | 3 cut(s) | 95, 198, 337 |
| Alw44I | GTGCAC | 1 cut(s) | 75 |
| AlwI | GGATC | 4 cut(s) | 125, 138, 146, 401 |
| Ama87I | CYCGRG | 2 cut(s) | 44, 98 |
| AoxI | GGCC | 2 cut(s) | 86, 257 |
| ApaLI | GTGCAC | 1 cut(s) | 75 |
| ApeKI | GCWGC | 1 cut(s) | 185 |
| ApoI | RAATTY | 1 cut(s) | 438 |
| AspLEI | GCGC | 1 cut(s) | 68 |
| AspS9I | GGNCC | 1 cut(s) | 257 |
| AsuHPI | GGTGA | 1 cut(s) | 16 |
| AvaI | CYCGRG | 2 cut(s) | 44, 98 |
| BaeGI | GKGCMC | 2 cut(s) | 79, 493 |
| BamHI | GGATCC | 1 cut(s) | 130 |
| BanI | GGYRCC | 1 cut(s) | 65 |
| BbrPI | CACGTG | 1 cut(s) | 329 |
| BbsI | GAAGAC | 1 cut(s) | 275 |
| Bbv12I | GWGCWC | 1 cut(s) | 79 |
| BbvI | GCAGC | 1 cut(s) | 172 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 315, 349 |
| BclI | TGATCA | 1 cut(s) | 21 |
| BcoDI | GTCTC | 3 cut(s) | 95, 198, 337 |
| BcuI | ACTAGT | 1 cut(s) | 452 |
| BfaI | CTAG | 2 cut(s) | 236, 453 |
| BfoI | RGCGCY | 1 cut(s) | 69 |
| BisI | GCNGC | 2 cut(s) | 186, 189 |
| BlsI | GCNGC | 2 cut(s) | 187, 190 |
| BmeT110I | CYCGRG | 2 cut(s) | 44, 98 |
| BmgT120I | GGNCC | 1 cut(s) | 257 |
| BmiI | GGNNCC | 3 cut(s) | 67, 132, 162 |
| BmrI | ACTGGG | 1 cut(s) | 349 |
| BmuI | ACTGGG | 1 cut(s) | 349 |
| BpiI | GAAGAC | 1 cut(s) | 275 |
| BpuEI | CTTGAG | 1 cut(s) | 189 |
| BsaAI | YACGTR | 1 cut(s) | 329 |
| BsaHI | GRCGYC | 2 cut(s) | 66, 191 |
| BsaJI | CCNNGG | 1 cut(s) | 43 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 46, 390, 416 |
| Bse118I | RCCGGY | 3 cut(s) | 62, 169, 322 |
| Bse1I | ACTGG | 2 cut(s) | 355, 431 |
| BseDI | CCNNGG | 1 cut(s) | 43 |
| BseGI | GGATG | 1 cut(s) | 343 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 46, 390, 416 |
| BseMII | CTCAG | 1 cut(s) | 211 |
| BseNI | ACTGG | 2 cut(s) | 355, 431 |
| BseRI | GAGGAG | 2 cut(s) | 29, 32 |
| BseSI | GKGCMC | 2 cut(s) | 79, 493 |
| BseXI | GCAGC | 1 cut(s) | 172 |
| BsgI | GTGCAG | 1 cut(s) | 258 |
| BshFI | GGCC | 2 cut(s) | 88, 259 |
| BshNI | GGYRCC | 1 cut(s) | 65 |
| BsiHKAI | GWGCWC | 1 cut(s) | 79 |
| BsiHKCI | CYCGRG | 2 cut(s) | 44, 98 |
| BsiSI | CCGG | 3 cut(s) | 63, 170, 323 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 46, 390, 416 |
| BsmAI | GTCTC | 3 cut(s) | 95, 198, 337 |
| BsmBI | CGTCTC | 1 cut(s) | 198 |
| BsnI | GGCC | 2 cut(s) | 88, 259 |
| BsoBI | CYCGRG | 2 cut(s) | 44, 98 |
| Bsp1286I | GDGCHC | 2 cut(s) | 79, 493 |
| Bsp143I | GATC | 4 cut(s) | 21, 130, 151, 406 |
| BspACI | CCGC | 3 cut(s) | 143, 188, 294 |
| BspANI | GGCC | 2 cut(s) | 88, 259 |
| BspCNI | CTCAG | 1 cut(s) | 210 |
| BspLI | GGNNCC | 3 cut(s) | 67, 132, 162 |
| BspPI | GGATC | 4 cut(s) | 125, 138, 146, 401 |
| BspT107I | GGYRCC | 1 cut(s) | 65 |
| BsrFI | RCCGGY | 3 cut(s) | 62, 169, 322 |
| BsrI | ACTGG | 2 cut(s) | 355, 431 |
| BssAI | RCCGGY | 3 cut(s) | 62, 169, 322 |
| BssECI | CCNNGG | 1 cut(s) | 43 |
| BssMI | GATC | 4 cut(s) | 21, 130, 151, 406 |
| BssNI | GRCGYC | 2 cut(s) | 66, 191 |
| Bst4CI | ACNGT | 1 cut(s) | 350 |
| BstACI | GRCGYC | 2 cut(s) | 66, 191 |
| BstBAI | YACGTR | 1 cut(s) | 329 |
| BstC8I | GCNNGC | 3 cut(s) | 6, 64, 175 |
| BstDEI | CTNAG | 1 cut(s) | 197 |
| BstF5I | GGATG | 1 cut(s) | 343 |
| BstH2I | RGCGCY | 1 cut(s) | 69 |
| BstHHI | GCGC | 1 cut(s) | 68 |
| BstKTI | GATC | 4 cut(s) | 24, 133, 154, 409 |
| BstMAI | GTCTC | 3 cut(s) | 95, 198, 337 |
| BstMBI | GATC | 4 cut(s) | 21, 130, 151, 406 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 74 |
| BstSLI | GKGCMC | 2 cut(s) | 79, 493 |
| BstV1I | GCAGC | 1 cut(s) | 172 |
| BstV2I | GAAGAC | 1 cut(s) | 275 |
| BstX2I | RGATCY | 1 cut(s) | 130 |
| BstYI | RGATCY | 1 cut(s) | 130 |
| BsuRI | GGCC | 2 cut(s) | 88, 259 |
| BtsCI | GGATG | 1 cut(s) | 343 |
| BtsI | GCAGTG | 1 cut(s) | 481 |
| BtsIMutI | CAGTG | 1 cut(s) | 481 |
| Cac8I | GCNNGC | 3 cut(s) | 6, 64, 175 |
| CfoI | GCGC | 1 cut(s) | 68 |
| Cfr10I | RCCGGY | 3 cut(s) | 62, 169, 322 |
| Cfr13I | GGNCC | 1 cut(s) | 257 |
| CseI | GACGC | 1 cut(s) | 180 |
| CviAII | CATG | 1 cut(s) | 415 |
| CviJI | RGCY | 8 cut(s) | 88, 163, 173, 185, 223, 259, 316, 420 |
| CviKI_1 | RGCY | 8 cut(s) | 88, 163, 173, 185, 223, 259, 316, 420 |
| DdeI | CTNAG | 1 cut(s) | 197 |
| DinI | GGCGCC | 1 cut(s) | 67 |
| DpnI | GATC | 4 cut(s) | 23, 132, 153, 408 |
| DpnII | GATC | 4 cut(s) | 21, 130, 151, 406 |
| Eco57I | CTGAAG | 1 cut(s) | 387 |
| Eco72I | CACGTG | 1 cut(s) | 329 |
| Eco88I | CYCGRG | 2 cut(s) | 44, 98 |
| EcoO109I | RGGNCCY | 1 cut(s) | 257 |
| EcoRI | GAATTC | 1 cut(s) | 438 |
| EgeI | GGCGCC | 1 cut(s) | 67 |
| EheI | GGCGCC | 1 cut(s) | 67 |
| Esp3I | CGTCTC | 1 cut(s) | 198 |
| FaeI | CATG | 1 cut(s) | 418 |
| FatI | CATG | 1 cut(s) | 414 |
| FauI | CCCGC | 1 cut(s) | 301 |
| FbaI | TGATCA | 1 cut(s) | 21 |
| Fnu4HI | GCNGC | 2 cut(s) | 186, 189 |
| FokI | GGATG | 1 cut(s) | 350 |
| Fsp4HI | GCNGC | 2 cut(s) | 186, 189 |
| FspBI | CTAG | 2 cut(s) | 236, 453 |
| GlaI | GCGC | 1 cut(s) | 67 |
| GluI | GCNGC | 2 cut(s) | 186, 189 |
| HaeII | RGCGCY | 1 cut(s) | 69 |
| HaeIII | GGCC | 2 cut(s) | 88, 259 |
| HapII | CCGG | 3 cut(s) | 63, 170, 323 |
| HgaI | GACGC | 1 cut(s) | 180 |
| HhaI | GCGC | 1 cut(s) | 68 |
| Hin1I | GRCGYC | 2 cut(s) | 66, 191 |
| Hin1II | CATG | 1 cut(s) | 418 |
| Hin6I | GCGC | 1 cut(s) | 66 |
| HinP1I | GCGC | 1 cut(s) | 66 |
| HindIII | AAGCTT | 1 cut(s) | 314 |
| HinfI | GANTC | 2 cut(s) | 121, 371 |
| HpaII | CCGG | 3 cut(s) | 63, 170, 323 |
| HphI | GGTGA | 1 cut(s) | 16 |
| Hpy166II | GTNNAC | 1 cut(s) | 77 |
| Hpy188I | TCNGA | 3 cut(s) | 160, 264, 337 |
| Hpy188III | TCNNGA | 2 cut(s) | 98, 236 |
| Hpy8I | GTNNAC | 1 cut(s) | 77 |
| HpyAV | CCTTC | 1 cut(s) | 165 |
| HpyCH4III | ACNGT | 1 cut(s) | 350 |
| HpyCH4IV | ACGT | 2 cut(s) | 303, 328 |
| HpyCH4V | TGCA | 2 cut(s) | 77, 275 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 74 |
| HpyF3I | CTNAG | 1 cut(s) | 197 |
| HpySE526I | ACGT | 2 cut(s) | 303, 328 |
| Hsp92I | GRCGYC | 2 cut(s) | 66, 191 |
| Hsp92II | CATG | 1 cut(s) | 418 |
| HspAI | GCGC | 1 cut(s) | 66 |
| KasI | GGCGCC | 1 cut(s) | 65 |
| KroI | GCCGGC | 1 cut(s) | 62 |
| KroNI | GCCGGC | 1 cut(s) | 64 |
| Ksp22I | TGATCA | 1 cut(s) | 21 |
| Kzo9I | GATC | 4 cut(s) | 21, 130, 151, 406 |
| LmnI | GCTCC | 1 cut(s) | 160 |
| LpnPI | CCDG | 8 cut(s) | 76, 183, 240, 310, 336, 368, 378, 412 |
| Lsp1109I | GCAGC | 1 cut(s) | 172 |
| MaeI | CTAG | 2 cut(s) | 236, 453 |
| MaeII | ACGT | 2 cut(s) | 303, 328 |
| MaeIII | GTNAC | 1 cut(s) | 299 |
| MalI | GATC | 4 cut(s) | 23, 132, 153, 408 |
| MboI | GATC | 4 cut(s) | 21, 130, 151, 406 |
| MboII | GAAGA | 3 cut(s) | 229, 275, 380 |
| MflI | RGATCY | 1 cut(s) | 130 |
| MhlI | GDGCHC | 2 cut(s) | 79, 493 |
| MluCI | AATT | 2 cut(s) | 210, 438 |
| Mly113I | GGCGCC | 1 cut(s) | 66 |
| MmeI | TCCRAC | 1 cut(s) | 108 |
| MnlI | CCTC | 4 cut(s) | 50, 53, 232, 270 |
| MroNI | GCCGGC | 1 cut(s) | 62 |
| MslI | CAYNNNNRTG | 1 cut(s) | 29 |
| MspI | CCGG | 3 cut(s) | 63, 170, 323 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 74 |
| NaeI | GCCGGC | 1 cut(s) | 64 |
| NarI | GGCGCC | 1 cut(s) | 66 |
| NdeII | GATC | 4 cut(s) | 21, 130, 151, 406 |
| NgoMIV | GCCGGC | 1 cut(s) | 62 |
| NlaIII | CATG | 1 cut(s) | 418 |
| NlaIV | GGNNCC | 3 cut(s) | 67, 132, 162 |
| NmuCI | GTSAC | 1 cut(s) | 299 |
| OliI | CACNNNNGTG | 1 cut(s) | 29 |
| PdiI | GCCGGC | 1 cut(s) | 64 |
| PfeI | GAWTC | 2 cut(s) | 121, 371 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 390 |
| PkrI | GCNGC | 2 cut(s) | 187, 190 |
| PluTI | GGCGCC | 1 cut(s) | 69 |
| PmaCI | CACGTG | 1 cut(s) | 329 |
| PmlI | CACGTG | 1 cut(s) | 329 |
| Ppu21I | YACGTR | 1 cut(s) | 329 |
| PspCI | CACGTG | 1 cut(s) | 329 |
| PspN4I | GGNNCC | 3 cut(s) | 67, 132, 162 |
| PspPI | GGNCC | 1 cut(s) | 257 |
| PsuI | RGATCY | 1 cut(s) | 130 |
| RseI | CAYNNNNRTG | 1 cut(s) | 29 |
| SatI | GCNGC | 2 cut(s) | 186, 189 |
| Sau3AI | GATC | 4 cut(s) | 21, 130, 151, 406 |
| Sau96I | GGNCC | 1 cut(s) | 257 |
| SduI | GDGCHC | 2 cut(s) | 79, 493 |
| SetI | ASST | 8 cut(s) | 82, 119, 187, 225, 306, 318, 331, 367 |
| SfoI | GGCGCC | 1 cut(s) | 67 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 29 |
| SmlI | CTYRAG | 1 cut(s) | 204 |
| SmoI | CTYRAG | 1 cut(s) | 204 |
| SpeI | ACTAGT | 1 cut(s) | 452 |
| Sse9I | AATT | 2 cut(s) | 210, 438 |
| SsiI | CCGC | 3 cut(s) | 143, 188, 294 |
| SspDI | GGCGCC | 1 cut(s) | 65 |
| SspMI | CTAG | 2 cut(s) | 236, 453 |
| TaaI | ACNGT | 1 cut(s) | 350 |
| TaiI | ACGT | 2 cut(s) | 306, 331 |
| TasI | AATT | 2 cut(s) | 210, 438 |
| TauI | GCSGC | 1 cut(s) | 191 |
| TfiI | GAWTC | 2 cut(s) | 121, 371 |
| TscAI | CASTG | 1 cut(s) | 481 |
| TseFI | GTSAC | 1 cut(s) | 299 |
| TseI | GCWGC | 1 cut(s) | 185 |
| Tsp45I | GTSAC | 1 cut(s) | 299 |
| TspDTI | ATGAA | 2 cut(s) | 375, 476 |
| TspRI | CASTG | 1 cut(s) | 481 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 390 |
| VneI | GTGCAC | 1 cut(s) | 75 |
| XapI | RAATTY | 1 cut(s) | 438 |
| XbaI | TCTAGA | 1 cut(s) | 235 |
| XspI | CTAG | 2 cut(s) | 236, 453 |