Rorug07G0121800

Auxin-induced protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
OG0000092
Physical Location & Seq
Forward (+)
9508350 .. 9509678
1329 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0121800.1

Sequence Viewer

Length: 1329 bp
ATGAGGATGAAGATAGAAGTCGAAGTAATCTTCCAAGAAACCATAAAACCTTCATCTCCCACCCGTCCCCATCTCCGCCGTCACCAGCTCTCCTTTCTCGACCAGTTAGCTCCCCACACCTACATCTCTTTCCTCTACTTCTACTCCCTCCCCAATACCCACAACCACACCCAAATCTCCACCCACCTCAAGACGTCTCTCTCCAAAACCCTGACCCAGTACTACCCACTAGCCGGCCGAGTCAAGTTCAACCTCTTTGTGGATTGCAACGACCATGGAATCCCCTTCTACCAGGCTCGAGTCAAATCCCACTCCCTCTCTGATGCCATCACCAATCCCTCCCTCTCCGAATTGACCAACTTGTTGCCTTTCAAGCCCGACGAGGTCACAGATATAGCTCTCGGAGTTCAACTCAATCTGTTTCCGTGTGGAGGAATTGCTATTGGGTTGTGCATTTCGCATCGAGTTGCAGATGCCTTGTCTTATTTCACGTTTGTTAGGAACTGGGCATCAACTACTGCTTGTGGAAATGCCTTTGTGGATGTGGACTTCTCGGCAGCTTCGATCTTCCCACCAAAGAATATGGATGGGTATAACGGCGTTCCTATTCCGAAAAAGAATGACATTGTGAGCAAGAGGTTTGTGTTTGATGGGTCGAAGATCGAAGCTTTACGAGCAAAGTATGCGGAGAGCATCAGACTGAAGACCAAGAAACCGCCGTCTCGCGTTGAGGCATTGTCTGCATTCTTGTGGAACAGGTTTTTGGCCGCGGCTAGAAAAGAAGAAGAATCAAGAAGTTTGAGAAGGTTGTACACGGTTGTGTATATTATGGATCTTCGTTCGAGGTTTGACCCACCTCTGCCGCAGAATAGATTTGGGAACTATTACCGGGCAGCCACTGCAACTCCAATATTGGTTGATGGGGAGGAGAGTGGTGGTCTTGTGAGGCAGGTGATTGAGGAAATAGAGAACATTGACAATAAGTATATCGGGAAATTTCAAGATGGCTATAAGGAACATTTTGATTTCCTGAGGAGAATGATGGAAAGGGCTGCAAAAGGAGAGCTGGTTACACTAACGTTTTCGAGTGTGTGCAGGTTTCCAATTTATGAGGCTGATTTTGGTTGGGGGAAGCCTGCATCGGTGAACATGGCTTCCATGAGAATCAGCAACCAGATAATTTTCATGGACACCAAAATGGGTGATGGAATAGAGTCATATTTTAACTTCAAGGAGGAAGACATAGCCAAGTTCGAGCTTGATTCAGAGTTCCTCGAGTTGATTTCTCCAATTGGTAATGTCAAGCAAAATCCATTTGCACGCCTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04075 map04075
Pfam Domains
Protein Families
Auxin_inducible

Protein Analysis

442

Amino Acids

50.36

Weight (kDa)

8.74

Isoelectric Point (pI)

42.93

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Transferase PF02458 6 - 424 4.2e-79 Transferase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000092)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G21210 AT2G21210 AT3G20220 AT4G34780 AT4G38840
fragaria_vesca FvH4_2g10810 FvH4_2g10820 FvH4_2g10850 FvH4_2g10870 FvH4_3g13730 FvH4_5g22620 FvH4_5g22660 FvH4_5g22690 FvH4_5g22700 FvH4_5g22780 FvH4_5g22790 FvH4_5g22810 FvH4_5g22821 FvH4_5g22822 FvH4_5g24600 FvH4_5g24720
malus_domestica MD05G1051600.v1.1 MD05G1051700.v1.1 MD05G1051800.v1.1 MD05G1052000.v1.1 MD05G1052100.v1.1 MD05G1052200.v1.1 MD05G1052300.v1.1 MD05G1052400.v1.1 MD05G1113300.v1.1 MD10G1059200.v1.1 MD10G1059500.v1.1 MD10G1059600.v1.1 MD10G1059700.v1.1 MD10G1059800.v1.1 MD10G1060100.v1.1 MD10G1060200.v1.1 MD10G1060300.v1.1 MD10G1060400.v1.1 MD10G1060500.v1.1 MD10G1060600.v1.1 MD10G1060700.v1.1 MD10G1060800.v1.1 MD10G1060900.v1.1 MD10G1061000.v1.1 MD10G1061100.v1.1
prunus_persica Prupe.8G078600_v2.0.a1 Prupe.8G078700_v2.0.a1 Prupe.8G078900_v2.0.a1 Prupe.8G079000_v2.0.a1 Prupe.8G079100_v2.0.a1 Prupe.8G079200_v2.0.a1 Prupe.8G079400_v2.0.a1 Prupe.8G079500_v2.0.a1 Prupe.8G079600_v2.0.a1 Prupe.8G079700_v2.0.a1 Prupe.8G079900_v2.0.a1 Prupe.8G080000_v2.0.a1 Prupe.8G080100_v2.0.a1 Prupe.8G080200_v2.0.a1 Prupe.8G080300_v2.0.a1 Prupe.8G080500_v2.0.a1 Prupe.8G080600_v2.0.a1 Prupe.8G080700_v2.0.a1 Prupe.8G080800_v2.0.a1 Prupe.8G081000_v2.0.a1 Prupe.8G081100_v2.0.a1 Prupe.8G081300_v2.0.a1 Prupe.8G081500_v2.0.a1 Prupe.8G081700_v2.0.a1 Prupe.8G157700_v2.0.a1
pyrus_communis pycom05g04350 pycom05g04390 pycom05g04400 pycom05g04410 pycom10g04550 pycom10g04560 pycom10g04570 pycom10g04580 pycom10g04590 pycom10g04600 pycom10g04610 pycom10g04630 pycom10g04640 pycom10g04650 pycom10g04660 pycom10g04680 pycom10g10040
rosa_chinensis RchiOBHm_Chr0c32g0501561 RchiOBHm_Chr2g0124401 RchiOBHm_Chr2g0124451 RchiOBHm_Chr2g0124461 RchiOBHm_Chr2g0124531 RchiOBHm_Chr2g0124561 RchiOBHm_Chr3g0483671 RchiOBHm_Chr3g0483711 RchiOBHm_Chr5g0056801 RchiOBHm_Chr5g0056821 RchiOBHm_Chr5g0056831 RchiOBHm_Chr5g0056841 RchiOBHm_Chr5g0059921 RchiOBHm_Chr6g0268901 RchiOBHm_Chr6g0268941 RchiOBHm_Chr6g0268951 RchiOBHm_Chr6g0268961 RchiOBHm_Chr7g0210461 RchiOBHm_Chr7g0210481 RchiOBHm_Chr7g0210491 RchiOBHm_Chr7g0210511 RchiOBHm_Chr7g0210531 RchiOBHm_Chr7g0210621 RchiOBHm_Chr7g0210641 RchiOBHm_Chr7g0210651 RchiOBHm_Chr7g0210661 RchiOBHm_Chr7g0210711 RchiOBHm_Chr7g0210801 RchiOBHm_Chr7g0210831 RchiOBHm_Chr7g0210851 RchiOBHm_Chr7g0210871 RchiOBHm_Chr7g0210881 RchiOBHm_Chr7g0210891 RchiOBHm_Chr7g0211121 RchiOBHm_Chr7g0211131 RchiOBHm_Chr7g0211151 RchiOBHm_Chr7g0211501 RchiOBHm_Chr7g0211511
rosa_laevigata RLG00000003016 RLG00000003020 RLG00000003021 RLG00000003031 RLG00000003032 RLG00000003033 RLG00000003034 RLG00000003040 RLG00000003041 RLG00000018801 RLG00000035128 RLG00000035129
rosa_multiflora Rmu_co8425977.1_g000001 Rmu_sc0001081.1_g000010 Rmu_sc0001081.1_g000011 Rmu_sc0001303.1_g000001 Rmu_sc0001303.1_g000002 Rmu_sc0001303.1_g000004 Rmu_sc0001303.1_g000007 Rmu_sc0001460.1_g000030 Rmu_sc0001460.1_g000035 Rmu_sc0001460.1_g000041 Rmu_sc0001460.1_g000048 Rmu_sc0002755.1_g000005 Rmu_sc0002755.1_g000011 Rmu_sc0002755.1_g000017 Rmu_sc0002755.1_g000027 Rmu_sc0003765.1_g000020 Rmu_sc0003765.1_g000042 Rmu_sc0003765.1_g000043 Rmu_sc0003765.1_g000048 Rmu_sc0003765.1_g000057 Rmu_sc0003765.1_g000058 Rmu_sc0003807.1_g000013 Rmu_sc0003807.1_g000014 Rmu_sc0003807.1_g000015 Rmu_sc0003807.1_g000018 Rmu_sc0003907.1_g000001 Rmu_sc0005302.1_g000002 Rmu_sc0005302.1_g000003 Rmu_sc0005696.1_g000001 Rmu_sc0005844.1_g000001 Rmu_sc0005844.1_g000002 Rmu_sc0005844.1_g000003 Rmu_sc0008289.1_g000006 Rmu_sc0008289.1_g000008 Rmu_sc0008289.1_g000009 Rmu_sc0008289.1_g000014 Rmu_sc0010535.1_g000012 Rmu_sc0010535.1_g000013 Rmu_sc0010535.1_g000014 Rmu_sc0010535.1_g000015 Rmu_sc0011084.1_g000001 Rmu_sc0011691.1_g000001 Rmu_sc0017239.1_g000001 Rmu_sc0018437.1_g000009 Rmu_sc0018662.1_g000001 Rmu_sc0018662.1_g000003 Rmu_sc0020409.1_g000001 Rmu_sc0024576.1_g000001 Rmu_sc0034951.1_g000001
rosa_roxburghii Rroxscaffold_1G00023480 Rroxscaffold_1G00023490 Rroxscaffold_1G00023570 Rroxscaffold_2G00119860 Rroxscaffold_2G00119910 Rroxscaffold_3G00247990 Rroxscaffold_3G00248000 Rroxscaffold_3G00248010 Rroxscaffold_3G00248060 Rroxscaffold_3G00248070 Rroxscaffold_3G00248090 Rroxscaffold_3G00248100 Rroxscaffold_3G00248210 Rroxscaffold_3G00248230 Rroxscaffold_3G00248240 Rroxscaffold_3G00248270 Rroxscaffold_3G00248290
rosa_rugosa Rorug02G0251000.1 Rorug02G0251100 Rorug02G0251100 Rorug02G0251200 Rorug02G0251300 Rorug05G0302000 Rorug05G0302100 Rorug05G0302400 Rorug05G0302500 Rorug06G0043500 Rorug06G0043600 Rorug06G0043600 Rorug07G0121600 Rorug07G0121700 Rorug07G0121800 Rorug07G0121900 Rorug07G0122300 Rorug07G0122400 Rorug07G0122500 Rorug07G0122600 Rorug07G0122700 Rorug07G0122700 Rorug07G0123100 Rorug07G0123200 Rorug07G0123300 Rorug07G0123600 Rorug07G0123700 Rorug07G0124200 Rorug07G0124300 Rorug07G0124500 Rorug07G0124500 Rorug07G0124500 Rorug07G0124500 Rorug07G0124600 Rorug07G0124700
rosa_wichuraiana Rw0G021160 Rw0G021170 Rw2G024970 Rw2G024980 Rw2G025000 Rw2G025020 Rw2G025030 Rw2G025040 Rw2G025050 Rw3G023170 Rw3G023180 Rw5G034930 Rw5G034940 Rw5G034960 Rw5G035050 Rw5G035060 Rw5G035070 Rw6G014100 Rw6G014110 Rw6G014130 Rw6G014140 Rw6G014150 Rw7G021690 Rw7G021700 Rw7G021710 Rw7G021720 Rw7G021740 Rw7G021750 Rw7G021760 Rw7G021770 Rw7G021790 Rw7G021800 Rw7G021810 Rw7G021820 Rw7G021900 Rw7G021910 Rw7G021920 Rw7G021930 Rw7G021940 Rw7G021950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 940
AatII GACGTC 1 cut(s) 197
Acc36I ACCTGC 2 cut(s) 940, 1086
AccII CGCG 2 cut(s) 726, 770
AciI CCGC 6 cut(s) 76, 686, 716, 768, 770, 863
AclI AACGTT 1 cut(s) 1079
AclWI GGATC 1 cut(s) 840
AcoI YGGCCR 2 cut(s) 235, 765
AcsI RAATTY 1 cut(s) 995
AcuI CTGAAG 1 cut(s) 722
AcyI GRCGYC 1 cut(s) 194
AfaI GTAC 2 cut(s) 221, 812
AfiI CCNNNNNNNGG 3 cut(s) 233, 259, 431
AgsI TTSAA 5 cut(s) 250, 373, 410, 1001, 1231
AjnI CCWGG 1 cut(s) 291
AjuI GAANNNNNNNTTGG 2 cut(s) 746, 778
AleI CACNNNNGTG 1 cut(s) 818
AloI GAACNNNNNNTCC 2 cut(s) 1139, 1171
AluBI AGCT 7 cut(s) 88, 110, 398, 560, 668, 1066, 1258
AluI AGCT 7 cut(s) 88, 110, 398, 560, 668, 1066, 1258
Alw26I GTCTC 2 cut(s) 201, 726
AlwI GGATC 1 cut(s) 840
AlwNI CAGNNNCTG 1 cut(s) 899
Ama87I CYCGRG 2 cut(s) 297, 1274
AoxI GGCC 2 cut(s) 235, 765
ApeKI GCWGC 3 cut(s) 557, 893, 1052
ApoI RAATTY 1 cut(s) 995
AsuC2I CCSGG 1 cut(s) 890
AsuHPI GGTGA 5 cut(s) 74, 322, 964, 1156, 1214
AvaI CYCGRG 2 cut(s) 297, 1274
AxyI CCTNAGG 1 cut(s) 1031
BbsI GAAGAC 2 cut(s) 710, 1245
BbvI GCAGC 3 cut(s) 569, 905, 1039
BccI CCATC 8 cut(s) 78, 335, 581, 644, 914, 998, 1036, 1199
BceAI ACGGC 3 cut(s) 63, 613, 703
BciT130I CCWGG 1 cut(s) 293
BcnI CCSGG 1 cut(s) 890
BcoDI GTCTC 2 cut(s) 201, 726
BfaI CTAG 2 cut(s) 230, 774
BfuAI ACCTGC 2 cut(s) 940, 1086
BisI GCNGC 6 cut(s) 558, 768, 771, 863, 894, 1053
BlsI GCNGC 6 cut(s) 559, 769, 772, 864, 895, 1054
BmcAI AGTACT 1 cut(s) 221
Bme1390I CCNGG 2 cut(s) 293, 890
BmeT110I CYCGRG 2 cut(s) 297, 1274
BmrFI CCNGG 2 cut(s) 293, 890
BmrI ACTGGG 2 cut(s) 211, 514
BmsI GCATC 6 cut(s) 313, 463, 469, 518, 702, 1148
BmuI ACTGGG 2 cut(s) 211, 514
BpiI GAAGAC 2 cut(s) 710, 1245
BplI GAGNNNNNCTC 2 cut(s) 396, 428
BpuEI CTTGAG 1 cut(s) 173
BpuMI CCSGG 1 cut(s) 890
BsaHI GRCGYC 1 cut(s) 194
BsaJI CCNNGG 2 cut(s) 274, 768
BsaXI ACNNNNNCTCC 8 cut(s) 74, 104, 128, 158, 889, 919, 1053, 1083
Bsc4I CCNNNNNNNGG 3 cut(s) 233, 259, 431
Bse118I RCCGGY 1 cut(s) 233
Bse1I ACTGG 3 cut(s) 103, 217, 509
Bse21I CCTNAGG 1 cut(s) 1031
BseBI CCWGG 1 cut(s) 293
BseDI CCNNGG 2 cut(s) 274, 768
BseGI GGATG 3 cut(s) 12, 547, 592
BseLI CCNNNNNNNGG 3 cut(s) 233, 259, 431
BseMII CTCAG 1 cut(s) 1022
BseNI ACTGG 3 cut(s) 103, 217, 509
BseRI GAGGAG 2 cut(s) 941, 1048
BseX3I CGGCCG 1 cut(s) 235
BseXI GCAGC 3 cut(s) 569, 905, 1039
BsgI GTGCAG 1 cut(s) 1114
Bsh1236I CGCG 2 cut(s) 726, 770
Bsh1285I CGRYCG 1 cut(s) 238
BshFI GGCC 2 cut(s) 237, 767
BsiEI CGRYCG 1 cut(s) 238
BsiHKCI CYCGRG 2 cut(s) 297, 1274
BsiSI CCGG 2 cut(s) 234, 889
BslFI GGGAC 1 cut(s) 51
BslI CCNNNNNNNGG 3 cut(s) 233, 259, 431
BsmAI GTCTC 2 cut(s) 201, 726
BsmBI CGTCTC 2 cut(s) 201, 726
BsmFI GGGAC 1 cut(s) 51
BsmI GAATGC 1 cut(s) 743
BsnI GGCC 2 cut(s) 237, 767
BsoBI CYCGRG 2 cut(s) 297, 1274
Bsp1407I TGTACA 1 cut(s) 810
Bsp143I GATC 3 cut(s) 564, 660, 832
Bsp19I CCATGG 1 cut(s) 274
BspACI CCGC 6 cut(s) 76, 686, 716, 768, 770, 863
BspANI GGCC 2 cut(s) 237, 767
BspCNI CTCAG 1 cut(s) 1023
BspFNI CGCG 2 cut(s) 726, 770
BspMI ACCTGC 2 cut(s) 940, 1086
BspPI GGATC 1 cut(s) 840
BsrFI RCCGGY 1 cut(s) 233
BsrGI TGTACA 1 cut(s) 810
BsrI ACTGG 3 cut(s) 103, 217, 509
BssAI RCCGGY 1 cut(s) 233
BssECI CCNNGG 2 cut(s) 274, 768
BssMI GATC 3 cut(s) 564, 660, 832
BssNI GRCGYC 1 cut(s) 194
BssT1I CCWWGG 1 cut(s) 274
Bst2UI CCWGG 1 cut(s) 293
Bst4CI ACNGT 1 cut(s) 817
BstACI GRCGYC 1 cut(s) 194
BstAPI GCANNNNNTGC 3 cut(s) 683, 740, 899
BstAUI TGTACA 1 cut(s) 810
BstC8I GCNNGC 3 cut(s) 235, 1137, 1321
BstDEI CTNAG 1 cut(s) 1031
BstDSI CCRYGG 2 cut(s) 274, 768
BstF5I GGATG 3 cut(s) 12, 547, 592
BstFNI CGCG 2 cut(s) 726, 770
BstKTI GATC 3 cut(s) 567, 663, 835
BstMAI GTCTC 2 cut(s) 201, 726
BstMBI GATC 3 cut(s) 564, 660, 832
BstMCI CGRYCG 1 cut(s) 238
BstMWI GCNNNNNNNGC 5 cut(s) 373, 674, 683, 740, 899
BstNI CCWGG 1 cut(s) 293
BstSCI CCNGG 2 cut(s) 291, 888
BstUI CGCG 2 cut(s) 726, 770
BstV1I GCAGC 3 cut(s) 569, 905, 1039
BstV2I GAAGAC 2 cut(s) 710, 1245
BstX2I RGATCY 1 cut(s) 832
BstYI RGATCY 1 cut(s) 832
BstZI CGGCCG 1 cut(s) 235
Bsu36I CCTNAGG 1 cut(s) 1031
BsuRI GGCC 2 cut(s) 237, 767
BtgI CCRYGG 2 cut(s) 274, 768
BtsCI GGATG 3 cut(s) 12, 547, 592
BtsI GCAGTG 1 cut(s) 897
BtsIMutI CAGTG 1 cut(s) 897
BveI ACCTGC 2 cut(s) 940, 1086
Cac8I GCNNGC 3 cut(s) 235, 1137, 1321
CaiI CAGNNNCTG 1 cut(s) 899
Cfr10I RCCGGY 1 cut(s) 233
Cfr42I CCGCGG 1 cut(s) 771
Csp6I GTAC 2 cut(s) 220, 811
CviAII CATG 4 cut(s) 275, 1150, 1159, 1186
CviQI GTAC 2 cut(s) 220, 811
DdeI CTNAG 1 cut(s) 1031
DpnI GATC 3 cut(s) 566, 662, 834
DpnII GATC 3 cut(s) 564, 660, 832
EaeI YGGCCR 2 cut(s) 235, 765
EagI CGGCCG 1 cut(s) 235
EciI GGCGGA 1 cut(s) 65
EclXI CGGCCG 1 cut(s) 235
Eco130I CCWWGG 1 cut(s) 274
Eco52I CGGCCG 1 cut(s) 235
Eco57I CTGAAG 1 cut(s) 722
Eco81I CCTNAGG 1 cut(s) 1031
Eco88I CYCGRG 2 cut(s) 297, 1274
EcoRII CCWGG 1 cut(s) 291
EcoT14I CCWWGG 1 cut(s) 274
ErhI CCWWGG 1 cut(s) 274
Esp3I CGTCTC 2 cut(s) 201, 726
FaeI CATG 4 cut(s) 278, 1153, 1162, 1189
FaqI GGGAC 1 cut(s) 51
FatI CATG 4 cut(s) 274, 1149, 1158, 1185
Fnu4HI GCNGC 6 cut(s) 558, 768, 771, 863, 894, 1053
FokI GGATG 3 cut(s) 19, 554, 599
Fsp4HI GCNGC 6 cut(s) 558, 768, 771, 863, 894, 1053
FspBI CTAG 2 cut(s) 230, 774
GluI GCNGC 6 cut(s) 558, 768, 771, 863, 894, 1053
HaeIII GGCC 2 cut(s) 237, 767
HapII CCGG 2 cut(s) 234, 889
Hin1I GRCGYC 1 cut(s) 194
Hin1II CATG 4 cut(s) 278, 1153, 1162, 1189
HindIII AAGCTT 1 cut(s) 666
HinfI GANTC 7 cut(s) 240, 279, 300, 788, 1164, 1214, 1262
HpaII CCGG 2 cut(s) 234, 889
HphI GGTGA 5 cut(s) 74, 322, 964, 1156, 1214
Hpy166II GTNNAC 3 cut(s) 547, 813, 1147
Hpy188I TCNGA 6 cut(s) 322, 349, 404, 612, 698, 1267
Hpy188III TCNNGA 6 cut(s) 98, 190, 792, 991, 1001, 1030
Hpy8I GTNNAC 3 cut(s) 547, 813, 1147
Hpy99I CGWCG 1 cut(s) 383
HpyAV CCTTC 3 cut(s) 60, 295, 798
HpyCH4III ACNGT 1 cut(s) 817
HpyCH4IV ACGT 3 cut(s) 194, 491, 1079
HpyCH4V TGCA 9 cut(s) 267, 453, 470, 743, 902, 1055, 1095, 1139, 1319
HpyF10VI GCNNNNNNNGC 5 cut(s) 373, 674, 683, 740, 899
HpyF3I CTNAG 1 cut(s) 1031
HpySE526I ACGT 3 cut(s) 194, 491, 1079
Hsp92I GRCGYC 1 cut(s) 194
Hsp92II CATG 4 cut(s) 278, 1153, 1162, 1189
KroI GCCGGC 1 cut(s) 233
KroNI GCCGGC 1 cut(s) 235
KspI CCGCGG 1 cut(s) 771
Kzo9I GATC 3 cut(s) 564, 660, 832
LmnI GCTCC 1 cut(s) 115
Lsp1109I GCAGC 3 cut(s) 569, 905, 1039
LweI GCATC 6 cut(s) 313, 463, 469, 518, 702, 1148
MaeI CTAG 2 cut(s) 230, 774
MaeII ACGT 3 cut(s) 194, 491, 1079
MaeIII GTNAC 3 cut(s) 80, 385, 1069
MalI GATC 3 cut(s) 566, 662, 834
MboI GATC 3 cut(s) 564, 660, 832
MboII GAAGA 9 cut(s) 22, 22, 559, 670, 715, 794, 797, 827, 1250
MfeI CAATTG 1 cut(s) 1290
MflI RGATCY 1 cut(s) 832
MluCI AATT 6 cut(s) 350, 435, 995, 1104, 1179, 1290
MlyI GAGTC 3 cut(s) 249, 309, 1223
MroNI GCCGGC 1 cut(s) 233
MseI TTAA 2 cut(s) 1224, 1327
MslI CAYNNNNRTG 3 cut(s) 748, 818, 1196
MspA1I CMGCKG 1 cut(s) 770
MspI CCGG 2 cut(s) 234, 889
MspR9I CCNGG 2 cut(s) 293, 890
MunI CAATTG 1 cut(s) 1290
Mva1269I GAATGC 1 cut(s) 743
MvaI CCWGG 1 cut(s) 293
MvnI CGCG 2 cut(s) 726, 770
MwoI GCNNNNNNNGC 5 cut(s) 373, 674, 683, 740, 899
NaeI GCCGGC 1 cut(s) 235
NciI CCSGG 1 cut(s) 890
NcoI CCATGG 1 cut(s) 274
NdeII GATC 3 cut(s) 564, 660, 832
NgoMIV GCCGGC 1 cut(s) 233
NlaIII CATG 4 cut(s) 278, 1153, 1162, 1189
NmeAIII GCCGAG 2 cut(s) 263, 533
NmuCI GTSAC 2 cut(s) 80, 385
OliI CACNNNNGTG 1 cut(s) 818
PaeR7I CTCGAG 2 cut(s) 297, 1274
PaqCI CACCTGC 1 cut(s) 940
PcsI WCGNNNNNNNCGW 1 cut(s) 560
PctI GAATGC 1 cut(s) 743
PdiI GCCGGC 1 cut(s) 235
PfeI GAWTC 4 cut(s) 279, 788, 1164, 1262
PflFI GACNNNGTC 1 cut(s) 383
PkrI GCNGC 6 cut(s) 559, 769, 772, 864, 895, 1054
PleI GAGTC 3 cut(s) 248, 308, 1222
PpsI GAGTC 3 cut(s) 248, 308, 1222
Psp1406I AACGTT 1 cut(s) 1079
Psp6I CCWGG 1 cut(s) 291
PspGI CCWGG 1 cut(s) 291
PspXI VCTCGAGB 2 cut(s) 297, 1274
PstNI CAGNNNCTG 1 cut(s) 899
PsuI RGATCY 1 cut(s) 832
PsyI GACNNNGTC 1 cut(s) 383
RsaI GTAC 2 cut(s) 221, 812
RsaNI GTAC 2 cut(s) 220, 811
RseI CAYNNNNRTG 3 cut(s) 748, 818, 1196
SacII CCGCGG 1 cut(s) 771
SaqAI TTAA 2 cut(s) 1224, 1327
SatI GCNGC 6 cut(s) 558, 768, 771, 863, 894, 1053
Sau3AI GATC 3 cut(s) 564, 660, 832
ScaI AGTACT 1 cut(s) 221
SchI GAGTC 3 cut(s) 249, 309, 1223
ScrFI CCNGG 2 cut(s) 293, 890
SfaNI GCATC 6 cut(s) 313, 463, 469, 518, 702, 1148
Sfr274I CTCGAG 2 cut(s) 297, 1274
Sfr303I CCGCGG 1 cut(s) 771
SgrBI CCGCGG 1 cut(s) 771
SlaI CTCGAG 2 cut(s) 297, 1274
SmiMI CAYNNNNRTG 3 cut(s) 748, 818, 1196
SmlI CTYRAG 3 cut(s) 188, 297, 1274
SmoI CTYRAG 3 cut(s) 188, 297, 1274
Sse9I AATT 6 cut(s) 350, 435, 995, 1104, 1179, 1290
SsiI CCGC 6 cut(s) 76, 686, 716, 768, 770, 863
SspI AATATT 1 cut(s) 912
SspMI CTAG 2 cut(s) 230, 774
StyD4I CCNGG 2 cut(s) 291, 888
StyI CCWWGG 1 cut(s) 274
TaaI ACNGT 1 cut(s) 817
TaiI ACGT 3 cut(s) 197, 494, 1082
TasI AATT 6 cut(s) 350, 435, 995, 1104, 1179, 1290
TatI WGTACW 2 cut(s) 219, 810
TauI GCSGC 3 cut(s) 770, 773, 865
TfiI GAWTC 4 cut(s) 279, 788, 1164, 1262
Tru1I TTAA 2 cut(s) 1224, 1327
Tru9I TTAA 2 cut(s) 1224, 1327
TscAI CASTG 1 cut(s) 904
TseFI GTSAC 2 cut(s) 80, 385
TseI GCWGC 3 cut(s) 557, 893, 1052
Tsp45I GTSAC 2 cut(s) 80, 385
TspDTI ATGAA 3 cut(s) 23, 42, 1174
TspGWI ACGGA 1 cut(s) 414
TspRI CASTG 1 cut(s) 904
Tth111I GACNNNGTC 1 cut(s) 383
XapI RAATTY 1 cut(s) 995
XhoI CTCGAG 2 cut(s) 297, 1274
XspI CTAG 2 cut(s) 230, 774
ZraI GACGTC 1 cut(s) 195
ZrmI AGTACT 1 cut(s) 221
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.