Auxin-induced protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Auxin_inducible | PF02519 | 18 - 97 | 1.8e-22 | Auxin responsive protein |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 349 |
| AciI | CCGC | 1 cut(s) | 237 |
| AcsI | RAATTY | 2 cut(s) | 212, 409 |
| AcuI | CTGAAG | 1 cut(s) | 225 |
| AfaI | GTAC | 2 cut(s) | 306, 497 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 236 |
| AgsI | TTSAA | 3 cut(s) | 169, 344, 469 |
| AjnI | CCWGG | 2 cut(s) | 16, 294 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 198, 230 |
| AluBI | AGCT | 3 cut(s) | 203, 277, 288 |
| AluI | AGCT | 3 cut(s) | 203, 277, 288 |
| Alw21I | GWGCWC | 1 cut(s) | 279 |
| ApeKI | GCWGC | 1 cut(s) | 13 |
| ApoI | RAATTY | 2 cut(s) | 212, 409 |
| BanII | GRGCYC | 1 cut(s) | 279 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 461, 493 |
| BbsI | GAAGAC | 1 cut(s) | 267 |
| Bbv12I | GWGCWC | 1 cut(s) | 279 |
| BciT130I | CCWGG | 2 cut(s) | 18, 296 |
| BciVI | GTATCC | 1 cut(s) | 212 |
| BclI | TGATCA | 1 cut(s) | 403 |
| BfuI | GTATCC | 1 cut(s) | 212 |
| BisI | GCNGC | 1 cut(s) | 14 |
| BlpI | GCTNAGC | 1 cut(s) | 328 |
| BlsI | GCNGC | 1 cut(s) | 15 |
| Bme1390I | CCNGG | 2 cut(s) | 18, 296 |
| BmrFI | CCNGG | 2 cut(s) | 18, 296 |
| BmsI | GCATC | 1 cut(s) | 86 |
| BpiI | GAAGAC | 1 cut(s) | 267 |
| BpmI | CTGGAG | 1 cut(s) | 317 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 328 |
| BpuEI | CTTGAG | 1 cut(s) | 293 |
| BsaBI | GATNNNNATC | 1 cut(s) | 55 |
| BsaJI | CCNNGG | 2 cut(s) | 231, 456 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 236 |
| Bse1I | ACTGG | 1 cut(s) | 493 |
| Bse8I | GATNNNNATC | 1 cut(s) | 55 |
| BseBI | CCWGG | 2 cut(s) | 18, 296 |
| BseDI | CCNNGG | 2 cut(s) | 231, 456 |
| BseJI | GATNNNNATC | 1 cut(s) | 55 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 236 |
| BseMII | CTCAG | 2 cut(s) | 185, 342 |
| BseNI | ACTGG | 1 cut(s) | 493 |
| BsiHKAI | GWGCWC | 1 cut(s) | 279 |
| BsiSI | CCGG | 1 cut(s) | 10 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 236 |
| Bsp1286I | GDGCHC | 1 cut(s) | 279 |
| Bsp1407I | TGTACA | 1 cut(s) | 304 |
| Bsp143I | GATC | 3 cut(s) | 50, 337, 403 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 328 |
| Bsp19I | CCATGG | 1 cut(s) | 231 |
| BspACI | CCGC | 1 cut(s) | 237 |
| BspCNI | CTCAG | 2 cut(s) | 186, 341 |
| BsrGI | TGTACA | 1 cut(s) | 304 |
| BsrI | ACTGG | 1 cut(s) | 493 |
| BssECI | CCNNGG | 2 cut(s) | 231, 456 |
| BssMI | GATC | 3 cut(s) | 50, 337, 403 |
| BssT1I | CCWWGG | 2 cut(s) | 231, 456 |
| Bst2UI | CCWGG | 2 cut(s) | 18, 296 |
| BstAUI | TGTACA | 1 cut(s) | 304 |
| BstDEI | CTNAG | 4 cut(s) | 44, 88, 194, 328 |
| BstDSI | CCRYGG | 1 cut(s) | 231 |
| BstKTI | GATC | 3 cut(s) | 53, 340, 406 |
| BstMBI | GATC | 3 cut(s) | 50, 337, 403 |
| BstNI | CCWGG | 2 cut(s) | 18, 296 |
| BstNSI | RCATGY | 1 cut(s) | 311 |
| BstSCI | CCNGG | 2 cut(s) | 16, 294 |
| BstV2I | GAAGAC | 1 cut(s) | 267 |
| BsuI | GTATCC | 1 cut(s) | 212 |
| BtgI | CCRYGG | 1 cut(s) | 231 |
| BtsI | GCAGTG | 1 cut(s) | 262 |
| BtsIMutI | CAGTG | 1 cut(s) | 262 |
| Csp6I | GTAC | 2 cut(s) | 305, 496 |
| CviAII | CATG | 6 cut(s) | 162, 184, 232, 308, 437, 473 |
| CviQI | GTAC | 2 cut(s) | 305, 496 |
| DdeI | CTNAG | 4 cut(s) | 44, 88, 194, 328 |
| DpnI | GATC | 3 cut(s) | 52, 339, 405 |
| DpnII | GATC | 3 cut(s) | 50, 337, 403 |
| Ecl136II | GAGCTC | 1 cut(s) | 277 |
| Eco130I | CCWWGG | 2 cut(s) | 231, 456 |
| Eco24I | GRGCYC | 1 cut(s) | 279 |
| Eco32I | GATATC | 1 cut(s) | 94 |
| Eco53kI | GAGCTC | 1 cut(s) | 277 |
| Eco57I | CTGAAG | 1 cut(s) | 225 |
| EcoICRI | GAGCTC | 1 cut(s) | 277 |
| EcoRII | CCWGG | 2 cut(s) | 16, 294 |
| EcoRV | GATATC | 1 cut(s) | 94 |
| EcoT14I | CCWWGG | 2 cut(s) | 231, 456 |
| EcoT38I | GRGCYC | 1 cut(s) | 279 |
| ErhI | CCWWGG | 2 cut(s) | 231, 456 |
| FaeI | CATG | 6 cut(s) | 165, 187, 235, 311, 440, 476 |
| FatI | CATG | 6 cut(s) | 161, 183, 231, 307, 436, 472 |
| FauNDI | CATATG | 1 cut(s) | 400 |
| FbaI | TGATCA | 1 cut(s) | 403 |
| FblI | GTMKAC | 1 cut(s) | 349 |
| Fnu4HI | GCNGC | 1 cut(s) | 14 |
| FriOI | GRGCYC | 1 cut(s) | 279 |
| Fsp4HI | GCNGC | 1 cut(s) | 14 |
| GluI | GCNGC | 1 cut(s) | 14 |
| GsuI | CTGGAG | 1 cut(s) | 317 |
| HapII | CCGG | 1 cut(s) | 10 |
| Hin1II | CATG | 6 cut(s) | 165, 187, 235, 311, 440, 476 |
| HinfI | GANTC | 2 cut(s) | 151, 196 |
| HpaII | CCGG | 1 cut(s) | 10 |
| Hpy166II | GTNNAC | 2 cut(s) | 350, 371 |
| Hpy188I | TCNGA | 2 cut(s) | 408, 427 |
| Hpy8I | GTNNAC | 2 cut(s) | 350, 371 |
| HpyAV | CCTTC | 2 cut(s) | 186, 452 |
| HpyCH4IV | ACGT | 1 cut(s) | 346 |
| HpyCH4V | TGCA | 2 cut(s) | 113, 255 |
| HpyF3I | CTNAG | 4 cut(s) | 44, 88, 194, 328 |
| HpySE526I | ACGT | 1 cut(s) | 346 |
| Hsp92II | CATG | 6 cut(s) | 165, 187, 235, 311, 440, 476 |
| Ksp22I | TGATCA | 1 cut(s) | 403 |
| Kzo9I | GATC | 3 cut(s) | 50, 337, 403 |
| LpnPI | CCDG | 8 cut(s) | 3, 23, 30, 146, 281, 298, 308, 506 |
| LweI | GCATC | 1 cut(s) | 86 |
| MaeII | ACGT | 1 cut(s) | 346 |
| MalI | GATC | 3 cut(s) | 52, 339, 405 |
| MboI | GATC | 3 cut(s) | 50, 337, 403 |
| MboII | GAAGA | 6 cut(s) | 45, 148, 218, 221, 272, 332 |
| MhlI | GDGCHC | 1 cut(s) | 279 |
| MluCI | AATT | 4 cut(s) | 21, 212, 409, 487 |
| MlyI | GAGTC | 1 cut(s) | 205 |
| MmeI | TCCRAC | 1 cut(s) | 103 |
| MnlI | CCTC | 1 cut(s) | 359 |
| MseI | TTAA | 1 cut(s) | 290 |
| MspI | CCGG | 1 cut(s) | 10 |
| MspR9I | CCNGG | 2 cut(s) | 18, 296 |
| MvaI | CCWGG | 2 cut(s) | 18, 296 |
| NcoI | CCATGG | 1 cut(s) | 231 |
| NdeI | CATATG | 1 cut(s) | 400 |
| NdeII | GATC | 3 cut(s) | 50, 337, 403 |
| NlaIII | CATG | 6 cut(s) | 165, 187, 235, 311, 440, 476 |
| NspI | RCATGY | 1 cut(s) | 311 |
| PfeI | GAWTC | 1 cut(s) | 151 |
| PkrI | GCNGC | 1 cut(s) | 15 |
| PleI | GAGTC | 1 cut(s) | 204 |
| PpsI | GAGTC | 1 cut(s) | 204 |
| Psp124BI | GAGCTC | 1 cut(s) | 279 |
| Psp6I | CCWGG | 2 cut(s) | 16, 294 |
| PspGI | CCWGG | 2 cut(s) | 16, 294 |
| RsaI | GTAC | 2 cut(s) | 306, 497 |
| RsaNI | GTAC | 2 cut(s) | 305, 496 |
| SacI | GAGCTC | 1 cut(s) | 279 |
| SaqAI | TTAA | 1 cut(s) | 290 |
| SatI | GCNGC | 1 cut(s) | 14 |
| Sau3AI | GATC | 3 cut(s) | 50, 337, 403 |
| SchI | GAGTC | 1 cut(s) | 205 |
| ScrFI | CCNGG | 2 cut(s) | 18, 296 |
| SduI | GDGCHC | 1 cut(s) | 279 |
| SfaNI | GCATC | 1 cut(s) | 86 |
| SmlI | CTYRAG | 1 cut(s) | 272 |
| SmoI | CTYRAG | 1 cut(s) | 272 |
| Sse9I | AATT | 4 cut(s) | 21, 212, 409, 487 |
| SsiI | CCGC | 1 cut(s) | 237 |
| SstI | GAGCTC | 1 cut(s) | 279 |
| StyD4I | CCNGG | 2 cut(s) | 16, 294 |
| StyI | CCWWGG | 2 cut(s) | 231, 456 |
| TaiI | ACGT | 1 cut(s) | 349 |
| TasI | AATT | 4 cut(s) | 21, 212, 409, 487 |
| TatI | WGTACW | 1 cut(s) | 304 |
| TfiI | GAWTC | 1 cut(s) | 151 |
| Tru1I | TTAA | 1 cut(s) | 290 |
| Tru9I | TTAA | 1 cut(s) | 290 |
| TscAI | CASTG | 1 cut(s) | 262 |
| TseI | GCWGC | 1 cut(s) | 13 |
| TspDTI | ATGAA | 4 cut(s) | 45, 168, 172, 425 |
| TspRI | CASTG | 1 cut(s) | 262 |
| XapI | RAATTY | 2 cut(s) | 212, 409 |
| XceI | RCATGY | 1 cut(s) | 311 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 292 |
| XmiI | GTMKAC | 1 cut(s) | 349 |