Auxin-induced protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Auxin_inducible | PF02519 | 92 - 169 | 1.1e-21 | Auxin responsive protein |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 515 |
| AccIII | TCCGGA | 1 cut(s) | 69 |
| AciI | CCGC | 2 cut(s) | 125, 477 |
| AcoI | YGGCCR | 1 cut(s) | 530 |
| AcsI | RAATTY | 3 cut(s) | 44, 261, 452 |
| AcuI | CTGAAG | 1 cut(s) | 465 |
| AfeI | AGCGCT | 1 cut(s) | 83 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 476 |
| AgsI | TTSAA | 5 cut(s) | 59, 267, 321, 409, 523 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 438, 470 |
| AluBI | AGCT | 3 cut(s) | 317, 443, 503 |
| AluI | AGCT | 3 cut(s) | 317, 443, 503 |
| Ama87I | CYCGRG | 1 cut(s) | 110 |
| Aor13HI | TCCGGA | 1 cut(s) | 69 |
| Aor51HI | AGCGCT | 1 cut(s) | 83 |
| AoxI | GGCC | 1 cut(s) | 530 |
| ApeKI | GCWGC | 1 cut(s) | 88 |
| ApoI | RAATTY | 3 cut(s) | 44, 261, 452 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 54 |
| AspLEI | GCGC | 1 cut(s) | 84 |
| AspS9I | GGNCC | 2 cut(s) | 72, 95 |
| AsuII | TTCGAA | 1 cut(s) | 48 |
| AvaI | CYCGRG | 1 cut(s) | 110 |
| AvaII | GGWCC | 2 cut(s) | 72, 95 |
| BalI | TGGCCA | 1 cut(s) | 532 |
| BbsI | GAAGAC | 2 cut(s) | 147, 235 |
| BbvI | GCAGC | 1 cut(s) | 100 |
| BciVI | GTATCC | 1 cut(s) | 452 |
| BfaI | CTAG | 1 cut(s) | 258 |
| BfoI | RGCGCY | 1 cut(s) | 85 |
| BfuAI | ACCTGC | 1 cut(s) | 515 |
| BfuI | GTATCC | 1 cut(s) | 452 |
| BisI | GCNGC | 2 cut(s) | 89, 478 |
| BlsI | GCNGC | 2 cut(s) | 90, 479 |
| Bme18I | GGWCC | 2 cut(s) | 72, 95 |
| BmeT110I | CYCGRG | 1 cut(s) | 110 |
| BmgT120I | GGNCC | 2 cut(s) | 72, 95 |
| BmiI | GGNNCC | 2 cut(s) | 117, 254 |
| BmsI | GCATC | 1 cut(s) | 489 |
| BpiI | GAAGAC | 2 cut(s) | 147, 235 |
| Bpu14I | TTCGAA | 1 cut(s) | 48 |
| BsaJI | CCNNGG | 2 cut(s) | 220, 471 |
| BsaWI | WCCGGW | 2 cut(s) | 69, 118 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 476 |
| Bse1I | ACTGG | 1 cut(s) | 533 |
| BseAI | TCCGGA | 1 cut(s) | 69 |
| BseDI | CCNNGG | 2 cut(s) | 220, 471 |
| BseGI | GGATG | 1 cut(s) | 466 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 476 |
| BseMII | CTCAG | 1 cut(s) | 425 |
| BseNI | ACTGG | 1 cut(s) | 533 |
| BseRI | GAGGAG | 1 cut(s) | 237 |
| BseXI | GCAGC | 1 cut(s) | 100 |
| BshFI | GGCC | 1 cut(s) | 532 |
| BsiHKCI | CYCGRG | 1 cut(s) | 110 |
| BsiSI | CCGG | 3 cut(s) | 70, 119, 250 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 476 |
| BsnI | GGCC | 1 cut(s) | 532 |
| BsoBI | CYCGRG | 1 cut(s) | 110 |
| Bsp119I | TTCGAA | 1 cut(s) | 48 |
| Bsp13I | TCCGGA | 1 cut(s) | 69 |
| Bsp143I | GATC | 2 cut(s) | 290, 463 |
| Bsp19I | CCATGG | 1 cut(s) | 471 |
| BspACI | CCGC | 2 cut(s) | 125, 477 |
| BspANI | GGCC | 1 cut(s) | 532 |
| BspCNI | CTCAG | 1 cut(s) | 426 |
| BspEI | TCCGGA | 1 cut(s) | 69 |
| BspLI | GGNNCC | 2 cut(s) | 117, 254 |
| BspMI | ACCTGC | 1 cut(s) | 515 |
| BspT104I | TTCGAA | 1 cut(s) | 48 |
| BsrI | ACTGG | 1 cut(s) | 533 |
| BssECI | CCNNGG | 2 cut(s) | 220, 471 |
| BssMI | GATC | 2 cut(s) | 290, 463 |
| BssT1I | CCWWGG | 1 cut(s) | 471 |
| Bst4CI | ACNGT | 4 cut(s) | 67, 146, 355, 417 |
| Bst6I | CTCTTC | 1 cut(s) | 123 |
| BstBI | TTCGAA | 1 cut(s) | 48 |
| BstC8I | GCNNGC | 1 cut(s) | 86 |
| BstDEI | CTNAG | 2 cut(s) | 328, 434 |
| BstDSI | CCRYGG | 1 cut(s) | 471 |
| BstF5I | GGATG | 1 cut(s) | 466 |
| BstH2I | RGCGCY | 1 cut(s) | 85 |
| BstHHI | GCGC | 1 cut(s) | 84 |
| BstKTI | GATC | 2 cut(s) | 293, 466 |
| BstMBI | GATC | 2 cut(s) | 290, 463 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 88, 122 |
| BstV1I | GCAGC | 1 cut(s) | 100 |
| BstV2I | GAAGAC | 2 cut(s) | 147, 235 |
| BsuI | GTATCC | 1 cut(s) | 452 |
| BsuRI | GGCC | 1 cut(s) | 532 |
| BtgI | CCRYGG | 1 cut(s) | 471 |
| BtgZI | GCGATG | 1 cut(s) | 191 |
| BtsCI | GGATG | 1 cut(s) | 466 |
| BtsIMutI | CAGTG | 1 cut(s) | 151 |
| BveI | ACCTGC | 1 cut(s) | 515 |
| Cac8I | GCNNGC | 1 cut(s) | 86 |
| CfoI | GCGC | 1 cut(s) | 84 |
| Cfr13I | GGNCC | 2 cut(s) | 72, 95 |
| CviAII | CATG | 1 cut(s) | 472 |
| DdeI | CTNAG | 2 cut(s) | 328, 434 |
| DpnI | GATC | 2 cut(s) | 292, 465 |
| DpnII | GATC | 2 cut(s) | 290, 463 |
| EaeI | YGGCCR | 1 cut(s) | 530 |
| Eam1104I | CTCTTC | 1 cut(s) | 123 |
| EarI | CTCTTC | 1 cut(s) | 123 |
| EciI | GGCGGA | 1 cut(s) | 140 |
| Eco130I | CCWWGG | 1 cut(s) | 471 |
| Eco47I | GGWCC | 2 cut(s) | 72, 95 |
| Eco47III | AGCGCT | 1 cut(s) | 83 |
| Eco57I | CTGAAG | 1 cut(s) | 465 |
| Eco88I | CYCGRG | 1 cut(s) | 110 |
| EcoO109I | RGGNCCY | 1 cut(s) | 95 |
| EcoT14I | CCWWGG | 1 cut(s) | 471 |
| ErhI | CCWWGG | 1 cut(s) | 471 |
| FaeI | CATG | 1 cut(s) | 475 |
| FaiI | YATR | 6 cut(s) | 242, 360, 403, 425, 473, 535 |
| FatI | CATG | 1 cut(s) | 471 |
| Fnu4HI | GCNGC | 2 cut(s) | 89, 478 |
| FokI | GGATG | 1 cut(s) | 453 |
| Fsp4HI | GCNGC | 2 cut(s) | 89, 478 |
| FspBI | CTAG | 1 cut(s) | 258 |
| GlaI | GCGC | 1 cut(s) | 83 |
| GluI | GCNGC | 2 cut(s) | 89, 478 |
| HaeII | RGCGCY | 1 cut(s) | 85 |
| HaeIII | GGCC | 1 cut(s) | 532 |
| HapII | CCGG | 3 cut(s) | 70, 119, 250 |
| HhaI | GCGC | 1 cut(s) | 84 |
| Hin1II | CATG | 1 cut(s) | 475 |
| Hin6I | GCGC | 1 cut(s) | 82 |
| HinP1I | GCGC | 1 cut(s) | 82 |
| HinfI | GANTC | 3 cut(s) | 170, 391, 436 |
| HpaII | CCGG | 3 cut(s) | 70, 119, 250 |
| Hpy188III | TCNNGA | 3 cut(s) | 70, 110, 337 |
| HpyAV | CCTTC | 1 cut(s) | 201 |
| HpyCH4III | ACNGT | 4 cut(s) | 67, 146, 355, 417 |
| HpyCH4V | TGCA | 3 cut(s) | 88, 495, 510 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 88, 122 |
| HpyF3I | CTNAG | 2 cut(s) | 328, 434 |
| Hsp92II | CATG | 1 cut(s) | 475 |
| HspAI | GCGC | 1 cut(s) | 82 |
| Kpn2I | TCCGGA | 1 cut(s) | 69 |
| Kzo9I | GATC | 2 cut(s) | 290, 463 |
| LmnI | GCTCC | 2 cut(s) | 121, 258 |
| LpnPI | CCDG | 7 cut(s) | 83, 132, 263, 323, 386, 514, 520 |
| Lsp1109I | GCAGC | 1 cut(s) | 100 |
| LweI | GCATC | 1 cut(s) | 489 |
| MaeI | CTAG | 1 cut(s) | 258 |
| MalI | GATC | 2 cut(s) | 292, 465 |
| MboI | GATC | 2 cut(s) | 290, 463 |
| MboII | GAAGA | 6 cut(s) | 140, 152, 240, 388, 458, 461 |
| MlsI | TGGCCA | 1 cut(s) | 532 |
| MluCI | AATT | 5 cut(s) | 44, 50, 261, 452, 486 |
| MluNI | TGGCCA | 1 cut(s) | 532 |
| MlyI | GAGTC | 1 cut(s) | 445 |
| MmeI | TCCRAC | 1 cut(s) | 343 |
| MnlI | CCTC | 8 cut(s) | 21, 86, 106, 124, 130, 174, 215, 218 |
| Mox20I | TGGCCA | 1 cut(s) | 532 |
| MroI | TCCGGA | 1 cut(s) | 69 |
| MroXI | GAANNNNTTC | 1 cut(s) | 54 |
| MscI | TGGCCA | 1 cut(s) | 532 |
| MseI | TTAA | 1 cut(s) | 78 |
| Msp20I | TGGCCA | 1 cut(s) | 532 |
| MspI | CCGG | 3 cut(s) | 70, 119, 250 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 88, 122 |
| NcoI | CCATGG | 1 cut(s) | 471 |
| NdeII | GATC | 2 cut(s) | 290, 463 |
| NlaIII | CATG | 1 cut(s) | 475 |
| NlaIV | GGNNCC | 2 cut(s) | 117, 254 |
| NmeAIII | GCCGAG | 1 cut(s) | 245 |
| NspV | TTCGAA | 1 cut(s) | 48 |
| PaeR7I | CTCGAG | 1 cut(s) | 110 |
| PdmI | GAANNNNTTC | 1 cut(s) | 54 |
| PfeI | GAWTC | 2 cut(s) | 170, 391 |
| PkrI | GCNGC | 2 cut(s) | 90, 479 |
| PleI | GAGTC | 1 cut(s) | 444 |
| PpsI | GAGTC | 1 cut(s) | 444 |
| PpuMI | RGGWCCY | 1 cut(s) | 95 |
| Psp5II | RGGWCCY | 1 cut(s) | 95 |
| PspN4I | GGNNCC | 2 cut(s) | 117, 254 |
| PspPI | GGNCC | 2 cut(s) | 72, 95 |
| PspPPI | RGGWCCY | 1 cut(s) | 95 |
| SaqAI | TTAA | 1 cut(s) | 78 |
| SatI | GCNGC | 2 cut(s) | 89, 478 |
| Sau3AI | GATC | 2 cut(s) | 290, 463 |
| Sau96I | GGNCC | 2 cut(s) | 72, 95 |
| SchI | GAGTC | 1 cut(s) | 445 |
| SetI | ASST | 8 cut(s) | 77, 97, 212, 319, 329, 445, 505, 509 |
| SfaNI | GCATC | 1 cut(s) | 489 |
| Sfr274I | CTCGAG | 1 cut(s) | 110 |
| SfuI | TTCGAA | 1 cut(s) | 48 |
| SinI | GGWCC | 2 cut(s) | 72, 95 |
| SlaI | CTCGAG | 1 cut(s) | 110 |
| SmlI | CTYRAG | 1 cut(s) | 110 |
| SmoI | CTYRAG | 1 cut(s) | 110 |
| Sse9I | AATT | 5 cut(s) | 44, 50, 261, 452, 486 |
| SsiI | CCGC | 2 cut(s) | 125, 477 |
| SspMI | CTAG | 1 cut(s) | 258 |
| StyI | CCWWGG | 1 cut(s) | 471 |
| TaaI | ACNGT | 4 cut(s) | 67, 146, 355, 417 |
| TaqI | TCGA | 3 cut(s) | 48, 111, 289 |
| TasI | AATT | 5 cut(s) | 44, 50, 261, 452, 486 |
| TauI | GCSGC | 1 cut(s) | 480 |
| TfiI | GAWTC | 2 cut(s) | 170, 391 |
| Tru1I | TTAA | 1 cut(s) | 78 |
| Tru9I | TTAA | 1 cut(s) | 78 |
| TscAI | CASTG | 1 cut(s) | 151 |
| TseI | GCWGC | 1 cut(s) | 88 |
| TspRI | CASTG | 1 cut(s) | 151 |
| VpaK11BI | GGWCC | 2 cut(s) | 72, 95 |
| XapI | RAATTY | 3 cut(s) | 44, 261, 452 |
| XhoI | CTCGAG | 1 cut(s) | 110 |
| XmnI | GAANNNNTTC | 1 cut(s) | 54 |
| XspI | CTAG | 1 cut(s) | 258 |